ClCG10G003950 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAACTTGGATCATTTATGGGCATCTGCATTTCTTGTCTTTGGTTTCAAATCTGAACCTCCATTCGTACAACTAAAGGCTGTTGATATGGTCCTATACATAAAAAAGGCTGCCCTCCCTTTGGCGATTCGGGCCTTCACAATGTTTTCGAGATGCAACTCAGCACTAGAGTTGCTGAAGGTATGCACAAATGCACTTGAGGAAGTAGAGAAGTCATTTGTATCTCAAATACAAGACTGGTGTGAAGGGTCCTTGTGTTGGAAGAAAAAGTTCCAAGGCTACCAACGGGTCGATGAATACGTGTGGCAAGACGTGACATTACTAAAAGCTACATTGCTCGAAACTCGAGCGAAGCTACTCCTTAGAGGTGGACACTTTGACAGCGCCGAAGAACTATGTAGAACTTGCATAAGTATAAGAACAGTCATGTTGGGACATAGCCATGCACAAACCTTGGCAGCACAAGAAACGTTAGCGAAGATCGTTAGACTTCGGAGCAAGATCTGA ATGGCCAACTTGGATCATTTATGGGCATCTGCATTTCTTGTCTTTGGTTTCAAATCTGAACCTCCATTCGTACAACTAAAGGCTGTTGATATGGTCCTATACATAAAAAAGGCTGCCCTCCCTTTGGCGATTCGGGCCTTCACAATGTTTTCGAGATGCAACTCAGCACTAGAGTTGCTGAAGGTATGCACAAATGCACTTGAGGAAGTAGAGAAGTCATTTGTATCTCAAATACAAGACTGGTGTGAAGGGTCCTTGTGTTGGAAGAAAAAGTTCCAAGGCTACCAACGGGTCGATGAATACGTGTGGCAAGACGTGACATTACTAAAAGCTACATTGCTCGAAACTCGAGCGAAGCTACTCCTTAGAGGTGGACACTTTGACAGCGCCGAAGAACTATGTAGAACTTGCATAAGTATAAGAACAGTCATGTTGGGACATAGCCATGCACAAACCTTGGCAGCACAAGAAACGTTAGCGAAGATCGTTAGACTTCGGAGCAAGATCTGA ATGGCCAACTTGGATCATTTATGGGCATCTGCATTTCTTGTCTTTGGTTTCAAATCTGAACCTCCATTCGTACAACTAAAGGCTGTTGATATGGTCCTATACATAAAAAAGGCTGCCCTCCCTTTGGCGATTCGGGCCTTCACAATGTTTTCGAGATGCAACTCAGCACTAGAGTTGCTGAAGGTATGCACAAATGCACTTGAGGAAGTAGAGAAGTCATTTGTATCTCAAATACAAGACTGGTGTGAAGGGTCCTTGTGTTGGAAGAAAAAGTTCCAAGGCTACCAACGGGTCGATGAATACGTGTGGCAAGACGTGACATTACTAAAAGCTACATTGCTCGAAACTCGAGCGAAGCTACTCCTTAGAGGTGGACACTTTGACAGCGCCGAAGAACTATGTAGAACTTGCATAAGTATAAGAACAGTCATGTTGGGACATAGCCATGCACAAACCTTGGCAGCACAAGAAACGTTAGCGAAGATCGTTAGACTTCGGAGCAAGATCTGA MANLDHLWASAFLVFGFKSEPPFVQLKAVDMVLYIKKAALPLAIRAFTMFSRCNSALELLKVCTNALEEVEKSFVSQIQDWCEGSLCWKKKFQGYQRVDEYVWQDVTLLKATLLETRAKLLLRGGHFDSAEELCRTCISIRTVMLGHSHAQTLAAQETLAKIVRLRSKI
BLAST of ClCG10G003950 vs. TrEMBL
Match: A0A0A0L5X3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G044470 PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 2.2e-89 Identity = 167/169 (98.82%), Postives = 168/169 (99.41%), Query Frame = 1
BLAST of ClCG10G003950 vs. TrEMBL
Match: A0A067KJB6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09526 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 3.4e-82 Identity = 152/169 (89.94%), Postives = 159/169 (94.08%), Query Frame = 1
BLAST of ClCG10G003950 vs. TrEMBL
Match: M5WR57_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000871mg PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 5.8e-82 Identity = 152/169 (89.94%), Postives = 158/169 (93.49%), Query Frame = 1
BLAST of ClCG10G003950 vs. TrEMBL
Match: A0A061F4L1_THECC (Tir-nbs resistance protein OS=Theobroma cacao GN=TCM_030509 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 2.9e-81 Identity = 151/167 (90.42%), Postives = 156/167 (93.41%), Query Frame = 1
BLAST of ClCG10G003950 vs. TrEMBL
Match: F6I4X0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g01800 PE=4 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 1.9e-80 Identity = 151/167 (90.42%), Postives = 156/167 (93.41%), Query Frame = 1
BLAST of ClCG10G003950 vs. TAIR10
Match: AT5G56220.1 (AT5G56220.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 287.7 bits (735), Expect = 4.6e-78 Identity = 144/169 (85.21%), Postives = 152/169 (89.94%), Query Frame = 1
BLAST of ClCG10G003950 vs. TAIR10
Match: AT4G23440.1 (AT4G23440.1 Disease resistance protein (TIR-NBS class)) HSP 1 Score: 163.3 bits (412), Expect = 1.3e-40 Identity = 75/165 (45.45%), Postives = 115/165 (69.70%), Query Frame = 1
BLAST of ClCG10G003950 vs. NCBI nr
Match: gi|449461122|ref|XP_004148292.1| (PREDICTED: uncharacterized protein LOC101212498 [Cucumis sativus]) HSP 1 Score: 336.3 bits (861), Expect = 3.2e-89 Identity = 167/169 (98.82%), Postives = 168/169 (99.41%), Query Frame = 1
BLAST of ClCG10G003950 vs. NCBI nr
Match: gi|659096234|ref|XP_008448985.1| (PREDICTED: uncharacterized protein LOC103490994 [Cucumis melo]) HSP 1 Score: 336.3 bits (861), Expect = 3.2e-89 Identity = 167/169 (98.82%), Postives = 168/169 (99.41%), Query Frame = 1
BLAST of ClCG10G003950 vs. NCBI nr
Match: gi|643728123|gb|KDP36311.1| (hypothetical protein JCGZ_09526 [Jatropha curcas]) HSP 1 Score: 312.4 bits (799), Expect = 4.9e-82 Identity = 152/169 (89.94%), Postives = 159/169 (94.08%), Query Frame = 1
BLAST of ClCG10G003950 vs. NCBI nr
Match: gi|802610025|ref|XP_012074169.1| (PREDICTED: uncharacterized protein LOC105635699 [Jatropha curcas]) HSP 1 Score: 312.4 bits (799), Expect = 4.9e-82 Identity = 152/169 (89.94%), Postives = 159/169 (94.08%), Query Frame = 1
BLAST of ClCG10G003950 vs. NCBI nr
Match: gi|595840905|ref|XP_007208111.1| (hypothetical protein PRUPE_ppa000871mg [Prunus persica]) HSP 1 Score: 311.6 bits (797), Expect = 8.3e-82 Identity = 152/169 (89.94%), Postives = 158/169 (93.49%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |