ClCG10G002370 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG10G002370
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	50S ribosomal protein L19
Location	CG_Chr10 : 2627927 .. 2630331 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAAAGAAGAAGAAGAAGAAATACAGAGTCACTGCCATGATTCTCTCTCTTTATCACTAATCCTCTTCCATTAGAAGCTCCAATTCCTTCATCAATGGCCTCCAAGATTCTTCCTCAGGTACCTTCCTTCTCTTGCCTTTTTAATATTCTCTCTAAATTCCCCCTTCTCATCTTCGTCACATTTCTTGTTTCAAGGCCGTGATTTCTATTCCAAGAAAGCCCAATCATTGTGCGCCGAGAAGGTTAGGGTTTTGTTCCGCAGTTTCTGTTACTCGTGTTTCGTTTTCTACTCTTTCCTCCAGCTCAATTGGCTGCCATTTTCACCACACCGTTGCGGCGCCGTTGAGACGAGCGTTTGTTGTGAGAGCTGAGGCGAGTTCCGAGGCGGAGTCGGCGGTTGAAGAAGCTTCTGAAGCTGAAGTAGAAGCAGTAGTGGAGTCTGATGCTCAGCCTGAGGAGGAGAAGGCGCCGAGAAAGCCTCGTGTTAAGCTCGGAGATGTAATGGGGGTAATTGTTCTATCCATTCATCCCATTAAGGAACACAAACTTTTTTGCAGTTCTGAATTAAGGAGCAAGTGGAGTTCTGTACTGGTTGTTTCGAATTATTTTCAATGCTTCCAAAGAGTTGTTTAGCTCTGTTTAATAGCGATTTAGTATTTTTTTTTTAGCTTTTGAAAGTTATATTTGTTTGATTACGATGCTCTTACCATAGTTTTCAAAACTAAGCTCAAAATTTGAAAACACTGCTAAAAGAAGACAATAAAACAATGAAATCAATAGGTGTAAGCATTAAGGTTTATTTTCAAAAATAAAATACGAAATGGTTGTCAAATGGGGGCTAAATAACTGCTTAAGAGTCGAAGTTGATCTCTCTCCATAGAAACTCTTTAACAGTTTTGTGTAGTACAAGATATCAGCTACCAATGGTGAAAGTTTAGAATACAGGGATTTTCTCATCTACAACGACTAGATGGTATGTGACAGTTAAACATGTGATGTGATGATCTGAATTTGAATTTGATTTTAGTTTTGTCATTCTTTTCTCATCTGGGTAGATACTTAATAAGCGGGCGATTGAAGCGTCGGAGAAGGAGAGGCCGATTCCAGACATTAGAACTGGTGACATTGTGGAGCTTAAACTGGTAAATTTCATTCTCAACCTCTATAGTCAAAACTCTTGTAGAAGTGTACAATTTTCTTAACTCATTTTAATAAAAATGTTATCGCTACTACAGGAAGTTCAAGAAAATAGGCGTAGACTTTCTGTTTATAGAGGAATTGTCATATCGAAACAAAATGCTGGCATCCACACTACGATTAGAATTCGCCGAATTATTGCTGGTGTTGGTGTGGAAATTGTTTTTCCGCTGTAAGTATTGAGTTCATTTTTCTTTCTTTCAAGGATCTAATATATGCTGTCAGCAGAATATGAGAGTGCTCAACTTCAATCTCGCTTGATGATGAACTCATTATTAAGCATATATAAGATTACTCTTTCTCTTCCCAATTCTTTTAAAAGAGTTGTGAAGAAACTATCTGGATTTGGATGACCTGAGAACACTTGAACCTTCTTTACATATCTAGGTTTTCAAATTTCTAAAACTTAACTTATCTTCAGCATCTGTTGTTTATTTAAACATAAAATTGAGTGTCTCCAGAACAATCTCACATGCTGATTCGGAAATAAAGCAATATTAGGTGGGGGTTTGGATGACTTGAGGAAACTTGAACCTTGTTACATATGTTGGTCTTAAATTCCTGTTTCCATTGTAGTAAAACCCCTCACCACATCCATCAAAATTAGATGAAATCAGAGCATTGGTCAATGATTTGAGAGCTCCCCTTGGTATGCTGAAAAGCACGCTGTGGCAAAGCTATTTTAAAGGAAAGGAAACCAAAGAAAATTTTCTTTTGCTCACAAGTCACATGTTATCAAAATTCAAAACTTGATGAAATGATAAACATTGGATTAAAAAATAAAATGAAAAATTGGGTGCCTGATGAATATATCTATTACCTGCTTGGTTATTTGTATGAGTGTGGTTTTAATCTGAAGATGGATTTCTATTGCAGATACTCACCAAATATCAGAGAGATAAAAGTGGTGAGCCACAGAAAGGTGAGGAGGGCAAGGTTGTATTATTTGAGAGACAAACTGCCAAAACTCTCTACTTTCAAGTGAAACCCCCCAATGGCTTTCCTTGTTTTTTCCATCGACCATCAACAGGTTGTATCTTGCTATGATTGAAAAGTTCCTGTTTCTTTTTCATAGATGTGGACATTGTTCTTCTGTATTTATATTATTCTCCTCCCACATTAGCATTTGCTAGTCTAATTATATATTTGAGCAACAGGGGTTTGATGAAAGCTACTGTCCTGGATTCACAATCACAACCTTGCTGAT

mRNA sequence

GAGAAAGAAGAAGAAGAAGAAATACAGAGTCACTGCCATGATTCTCTCTCTTTATCACTAATCCTCTTCCATTAGAAGCTCCAATTCCTTCATCAATGGCCTCCAAGATTCTTCCTCAGGCCGTGATTTCTATTCCAAGAAAGCCCAATCATTGTGCGCCGAGAAGGTTAGGGTTTTGTTCCGCAGTTTCTGTTACTCGTGTTTCGTTTTCTACTCTTTCCTCCAGCTCAATTGGCTGCCATTTTCACCACACCGTTGCGGCGCCGTTGAGACGAGCGTTTGTTGTGAGAGCTGAGGCGAGTTCCGAGGCGGAGTCGGCGGTTGAAGAAGCTTCTGAAGCTGAAGTAGAAGCAGTAGTGGAGTCTGATGCTCAGCCTGAGGAGGAGAAGGCGCCGAGAAAGCCTCGTGTTAAGCTCGGAGATGTAATGGGGATACTTAATAAGCGGGCGATTGAAGCGTCGGAGAAGGAGAGGCCGATTCCAGACATTAGAACTGGTGACATTGTGGAGCTTAAACTGGAAGTTCAAGAAAATAGGCGTAGACTTTCTGTTTATAGAGGAATTGTCATATCGAAACAAAATGCTGGCATCCACACTACGATTAGAATTCGCCGAATTATTGCTGGTGTTGGTGTGGAAATTGTTTTTCCGCTATACTCACCAAATATCAGAGAGATAAAAGTGGTGAGCCACAGAAAGGTGAGGAGGGCAAGGTTGTATTATTTGAGAGACAAACTGCCAAAACTCTCTACTTTCAAGTGAAACCCCCCAATGGCTTTCCTTGTTTTTTCCATCGACCATCAACAGGTTGTATCTTGCTATGATTGAAAAGTTCCTGTTTCTTTTTCATAGATGTGGACATTGTTCTTCTGTATTTATATTATTCTCCTCCCACATTAGCATTTGCTAGTCTAATTATATATTTGAGCAACAGGGGTTTGATGAAAGCTACTGTCCTGGATTCACAATCACAACCTTGCTGAT

Coding sequence (CDS)

ATGGCCTCCAAGATTCTTCCTCAGGCCGTGATTTCTATTCCAAGAAAGCCCAATCATTGTGCGCCGAGAAGGTTAGGGTTTTGTTCCGCAGTTTCTGTTACTCGTGTTTCGTTTTCTACTCTTTCCTCCAGCTCAATTGGCTGCCATTTTCACCACACCGTTGCGGCGCCGTTGAGACGAGCGTTTGTTGTGAGAGCTGAGGCGAGTTCCGAGGCGGAGTCGGCGGTTGAAGAAGCTTCTGAAGCTGAAGTAGAAGCAGTAGTGGAGTCTGATGCTCAGCCTGAGGAGGAGAAGGCGCCGAGAAAGCCTCGTGTTAAGCTCGGAGATGTAATGGGGATACTTAATAAGCGGGCGATTGAAGCGTCGGAGAAGGAGAGGCCGATTCCAGACATTAGAACTGGTGACATTGTGGAGCTTAAACTGGAAGTTCAAGAAAATAGGCGTAGACTTTCTGTTTATAGAGGAATTGTCATATCGAAACAAAATGCTGGCATCCACACTACGATTAGAATTCGCCGAATTATTGCTGGTGTTGGTGTGGAAATTGTTTTTCCGCTATACTCACCAAATATCAGAGAGATAAAAGTGGTGAGCCACAGAAAGGTGAGGAGGGCAAGGTTGTATTATTTGAGAGACAAACTGCCAAAACTCTCTACTTTCAAGTGA

Protein sequence

MASKILPQAVISIPRKPNHCAPRRLGFCSAVSVTRVSFSTLSSSSIGCHFHHTVAAPLRRAFVVRAEASSEAESAVEEASEAEVEAVVESDAQPEEEKAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK

Homology

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BLAST of ClCG10G002370 vs. Swiss-Prot
Match: RK191_ARATH (50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana GN=At4g17560 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.4e-66
Identity = 139/222 (62.61%), Postives = 168/222 (75.68%), Query Frame = 1


Query: 6   LPQAVISIPRKPNHCAPRRLGFCSAVSV-----TRVSFSTLSSSSIGCHFHHTVAAPLRR 65
           LPQA+  IPR P   + + LGF S +S      +R+S S LS +  G  F  ++   +R 
Sbjct: 8   LPQALHMIPRNPTQSS-KNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSLDTRVRN 67

Query: 66  AFVVRAE-ASSEAESAVEEASEAEVEAVVESDAQPEEEKAPRKPRVKLGDVMGILNKRAI 125
            F+VRAE  ++EAES    A  A+ E  VE   +  E K  RKPR+KLGDVMGILN++AI
Sbjct: 68  EFIVRAEEGNTEAESEEFVAEIADTEGNVE---EVVEAKPTRKPRIKLGDVMGILNQKAI 127

Query: 126 EASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVG 185
           E +EK RP+P+IRTGDIVE+KLEV EN+RRLS+Y+GIV+S+QNAGIHTTIRIRRIIAG+G
Sbjct: 128 EVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIG 187

Query: 186 VEIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 222
           VEIVFP+YSPNI+EIKVVSHRKVRRARLYYLRDKLP+LSTFK
Sbjct: 188 VEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 225

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BLAST of ClCG10G002370 vs. Swiss-Prot
Match: RK19_SPIOL (50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea GN=RPL19 PE=1 SV=2)

HSP 1 Score: 251.9 bits (642), Expect = 6.4e-66
Identity = 140/234 (59.83%), Postives = 175/234 (74.79%), Query Frame = 1


Query: 1   MASKILPQAVISIPRKPN-HCAP--RRLGF---------CSAVSVTRVSFSTLSSSSIGC 60
           MASK+LPQA++ IP   +  C P  ++LGF          S+   + +  S  SS+    
Sbjct: 1   MASKVLPQALLVIPSNHSLQCPPLKKQLGFPIDSNRRFSLSSNCRSNLMVSRASSNLFSS 60

Query: 61  HFHHTVAAPLRRAFVVRAEASSEAESAVEE-ASEAEVEAVVESDAQPEEEKAPRKPRVKL 120
           +F    + P R +FVVR+EA   +++  E  A  AE E  VES+A+  EE+ PR+ RVKL
Sbjct: 61  NFSSIFSFPARNSFVVRSEAEDSSDAPAESVAVVAEEELPVESEAE-AEERPPRQQRVKL 120

Query: 121 GDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHT 180
           GD+MGILNK+A+ A+E+ RP+P IRTGDIV+++LEV EN+RRLSVY+GIVIS+QNAGIHT
Sbjct: 121 GDIMGILNKKAVHAAEELRPVPGIRTGDIVQIRLEVPENKRRLSVYKGIVISRQNAGIHT 180

Query: 181 TIRIRRIIAGVGVEIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 222
           TIRIRRIIAGVGVEIVFPLYSPNI+EIKVVSHRKVR+ARLYYLRDKLP+LSTFK
Sbjct: 181 TIRIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRKARLYYLRDKLPRLSTFK 233

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BLAST of ClCG10G002370 vs. Swiss-Prot
Match: RK192_ARATH (50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana GN=At5g47190 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 7.1e-65
Identity = 137/231 (59.31%), Postives = 167/231 (72.29%), Query Frame = 1


Query: 2   ASKILPQAVISIPRKPNHCA---------PRRLGFCSAVSVTRVSFSTLSSSSIGCHFHH 61
           +S +LPQA+  IPR P+  +         PR     S +SV+RV F   SSS+ G     
Sbjct: 4   SSHLLPQALHMIPRTPSFSSKNLGVSSILPRASSVNSRLSVSRV-FLNHSSSNFG----F 63

Query: 62  TVAAPLRRAFVVRAEASSEAES--AVEEASEAEVEAVVESDAQPEEEKAPRKPRVKLGDV 121
            + +  R+ F+ +AE S+E E+   VE A E E E   E+    EE K P K RVKLGD+
Sbjct: 64  AIDSKKRKEFIAKAEESTEGETEAVVENAVETEAEGEGEATVAAEEAKPPWKTRVKLGDI 123

Query: 122 MGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIR 181
           MG+LNK+AIE +E  RP+P +RTGDIVE+KLEV EN+RRLS+Y+GIV+S+QNAGIHTTIR
Sbjct: 124 MGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIR 183

Query: 182 IRRIIAGVGVEIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 222
           IRRIIAG+GVEIVFP+YSPNI+EIKVVSHRKVRRARLYYLRDKLP+LSTFK
Sbjct: 184 IRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 229

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BLAST of ClCG10G002370 vs. Swiss-Prot
Match: RL19_CYAP4 (50S ribosomal protein L19 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplS PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.8e-21
Identity = 51/106 (48.11%), Postives = 74/106 (69.81%), Query Frame = 1


Query: 117 RAIEASEKERPIPDIRTGDIVELKLEVQE-NRRRLSVYRGIVISKQNAGIHTTIRIRRII 176
           R++EA + +  +P+I  GD V++ + +QE N+ R   Y GIVI+K+N+GI+ TI +RRI 
Sbjct: 8   RSLEAEQLKSNLPEIHVGDTVKVGVIIQEGNKERTQPYEGIVIAKRNSGINATITVRRIF 67

Query: 177 AGVGVEIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 222
            GVGVE VF L+SP +  IK++   KVRRA+LYYLRD++ K +  K
Sbjct: 68  QGVGVERVFLLHSPRVESIKIIKRGKVRRAKLYYLRDRVGKATRVK 113

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BLAST of ClCG10G002370 vs. Swiss-Prot
Match: RL19_NOSP7 (50S ribosomal protein L19 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplS PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.1e-20
Identity = 50/106 (47.17%), Postives = 74/106 (69.81%), Query Frame = 1


Query: 117 RAIEASEKERPIPDIRTGDIVELKLEVQENRR-RLSVYRGIVISKQNAGIHTTIRIRRII 176
           R+IEA + +  +PDI  GD V++ ++++E  + R+  Y G+VI+K+N GI+ TI +R++ 
Sbjct: 8   RSIEAEQLKSNLPDIYVGDTVKVGVKIKEGEKYRVQPYEGVVIAKRNGGINETITVRKVF 67

Query: 177 AGVGVEIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 222
            GVGVE VF L+SP I  IKV+   KVRRA+LYYLRD++ K +  K
Sbjct: 68  QGVGVERVFLLHSPRIDSIKVLRRGKVRRAKLYYLRDRVGKATRIK 113

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BLAST of ClCG10G002370 vs. TrEMBL
Match: A0A0A0L237_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017220 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 2.1e-108
Identity = 208/221 (94.12%), Postives = 211/221 (95.48%), Query Frame = 1


Query: 1   MASKILPQAVISIPRKPNHCAPRRLGFCSAVSVTRVSFSTLSSSSIGCHFHHTVAAPLRR 60
           MASKILPQAVISIPR PN CAPRRLGFCSAVS TRVSFSTLSSSSIG HFHHTVAAPLRR
Sbjct: 1   MASKILPQAVISIPRNPNQCAPRRLGFCSAVSGTRVSFSTLSSSSIGSHFHHTVAAPLRR 60

Query: 61  AFVVRAEASSEAESAVEEASEAEVEAVVESDAQPEEEKAPRKPRVKLGDVMGILNKRAIE 120
           AFVVRAEA+ EA+SA EEA EAEVEA VESDAQPEEEK  RKPRVKLGDVMGILNKRAIE
Sbjct: 61  AFVVRAEANPEADSAAEEAPEAEVEAAVESDAQPEEEKPSRKPRVKLGDVMGILNKRAIE 120

Query: 121 ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180
           ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV
Sbjct: 121 ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180

Query: 181 EIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 222
           EIVFPLYSPNIREI+VVSHRKVRRARLYYLRDKLPKLSTFK
Sbjct: 181 EIVFPLYSPNIREIRVVSHRKVRRARLYYLRDKLPKLSTFK 221

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BLAST of ClCG10G002370 vs. TrEMBL
Match: M5WV30_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009692mg PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.4e-75
Identity = 159/237 (67.09%), Postives = 188/237 (79.32%), Query Frame = 1


Query: 1   MASKILPQAVISIPRKPNHCAPRRLGFCSAVS------VTRVSFSTLSSSSIGCHFHHTV 60
           MASK LPQA+I++PR P H  P +LGF ++ S        RVS S +SSSS G  F   V
Sbjct: 45  MASKALPQALITMPRNPTHHPPVKLGFSASFSRRSSSNSARVSLSRVSSSSFGSSFCPIV 104

Query: 61  AAPLRRAFVVRAEASSEAESAV---EEASEAEVEA----VVESDA---QPEEEKAPRKPR 120
           AA  R  FVVRA++S+E E+     EEASEA VEA    VVES+    +PEE K PRK R
Sbjct: 105 AAMSRLDFVVRADSSTEGEAEAVGSEEASEAIVEAEAEPVVESEPEEPEPEEPKTPRKSR 164

Query: 121 VKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAG 180
           VKLGD+MGILNKRA+EA+ +ERP+PDIRTGD+V++KLEV EN+RRLSVY+GIVIS+QNAG
Sbjct: 165 VKLGDIMGILNKRAVEAAVQERPVPDIRTGDVVQIKLEVPENKRRLSVYKGIVISRQNAG 224

Query: 181 IHTTIRIRRIIAGVGVEIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 222
           IHTTIRIRRIIAG+GVEIVFPLYSPNI+E+KV+SHRKVRRARLYYLRDKLP+ STFK
Sbjct: 225 IHTTIRIRRIIAGIGVEIVFPLYSPNIKELKVLSHRKVRRARLYYLRDKLPRFSTFK 281

[Close]

BLAST of ClCG10G002370 vs. TrEMBL
Match: D7U6T6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0616g00020 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 6.9e-75
Identity = 153/233 (65.67%), Postives = 185/233 (79.40%), Query Frame = 1


Query: 1   MASKILPQAVISIPRKPNHCAPRRLGFC-------SAVSVTRVSFSTLSSSSIGCHFHHT 60
           MASK+LPQA+   PR  N   P++LG         S++++ R+S S  SS+S   HF   
Sbjct: 1   MASKVLPQALFITPRSSNQWPPKKLGLSTFPSPRSSSLNLNRLSTSRFSSNSFAFHFRPI 60

Query: 61  VAAPLRRAFVVRAEASSEAESAVEEASE-----AEVEAVVESDAQPEEEKAPRKPRVKLG 120
           V +P +R F+VRAEA +E E   +E +E     +E E+ V+ DA+ +E K PRKPRVKLG
Sbjct: 61  VVSP-KRFFIVRAEADNEGELGADENTEEEETVSETESEVKLDAE-DEAKPPRKPRVKLG 120

Query: 121 DVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTT 180
           D+MGILNKRAIEASEKERP+PD+RTGDIVE+KLEV ENRRRLS+Y+GIVISKQNAGIHTT
Sbjct: 121 DIMGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAGIHTT 180

Query: 181 IRIRRIIAGVGVEIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 222
           IR+RRIIAGVGVEIVFP+YSPNI+EIKVV+HRKVRRARLYYLRDKLP+LSTFK
Sbjct: 181 IRVRRIIAGVGVEIVFPVYSPNIKEIKVVNHRKVRRARLYYLRDKLPRLSTFK 231

[Close]

BLAST of ClCG10G002370 vs. TrEMBL
Match: A5B2A3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037813 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.3e-73
Identity = 151/233 (64.81%), Postives = 184/233 (78.97%), Query Frame = 1


Query: 1   MASKILPQAVISIPRKPNHCAPRRLGFCS-------AVSVTRVSFSTLSSSSIGCHFHHT 60
           MASK+LPQA+   PR  N   P++LG  +       ++++ R+S S  SS+S   HF   
Sbjct: 1   MASKVLPQALFITPRSSNQXPPKKLGLSTFPSPRSXSLNLNRLSTSRFSSNSFXFHFRPI 60

Query: 61  VAAPLRRAFVVRAEASSEAESAVEEASE-----AEVEAVVESDAQPEEEKAPRKPRVKLG 120
           V +P +R F+V AEA +E E   +E +E     +E E+ V+ DA+ +E K PRKPRVKLG
Sbjct: 61  VVSP-KRFFIVXAEADNEGELGPDENTEEEETVSETESEVKLDAE-DEAKPPRKPRVKLG 120

Query: 121 DVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTT 180
           D+MGILNKRAIEASEKERP+PD+RTGDIVE+KLEV ENRRRLS+Y+GIVISKQNAGIHTT
Sbjct: 121 DIMGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAGIHTT 180

Query: 181 IRIRRIIAGVGVEIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 222
           IR+RRIIAGVGVEIVFP+YSPNI+EIKVV+HRKVRRARLYYLRDKLP+LSTFK
Sbjct: 181 IRVRRIIAGVGVEIVFPVYSPNIKEIKVVNHRKVRRARLYYLRDKLPRLSTFK 231

[Close]

BLAST of ClCG10G002370 vs. TrEMBL
Match: A0A067EPG0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026573mg PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.5e-71
Identity = 155/238 (65.13%), Postives = 182/238 (76.47%), Query Frame = 1


Query: 1   MASKILPQAVISIPRKPNHCAP-RRLGFCSAVSVTRVSFST----LSSSSIGCHFHHTVA 60
           M S++LPQA+  IPR    C P +RLGF + +S  R  F +    +S+  IG +    V 
Sbjct: 1   MGSQVLPQALHWIPRSSTQCIPSKRLGFSTVLS--RGPFVSHGVSVSAKPIGWNLGFFVN 60

Query: 61  APLRRAFVVRAEASSEAE---SAVEEASEA---------EVEAVVESDAQPEEEKAPRKP 120
           A ++ +FVVRAEA+ EAE   S  EE +EA          VEA  E   + EE KAPRKP
Sbjct: 61  AQVKDSFVVRAEANEEAEANESIEEEQNEAVQAQGDVVVAVEAESEDKVEEEEVKAPRKP 120

Query: 121 RVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNA 180
           RVKLGD+MGILNKRA+EASE ERPIPDIRTGD+VE+KLEV ENRRRLS+Y+GIV+S+QNA
Sbjct: 121 RVKLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNA 180

Query: 181 GIHTTIRIRRIIAGVGVEIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 222
           GIHTTIRIRRIIAG+GVEIVFPLYSPNI+EIKVVSHRKVRRARLYYLRDKLP+LSTFK
Sbjct: 181 GIHTTIRIRRIIAGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236

[Close]

BLAST of ClCG10G002370 vs. TAIR10
Match: AT4G17560.1 (AT4G17560.1 Ribosomal protein L19 family protein)

HSP 1 Score: 251.9 bits (642), Expect = 3.6e-67
Identity = 139/222 (62.61%), Postives = 168/222 (75.68%), Query Frame = 1


Query: 6   LPQAVISIPRKPNHCAPRRLGFCSAVSV-----TRVSFSTLSSSSIGCHFHHTVAAPLRR 65
           LPQA+  IPR P   + + LGF S +S      +R+S S LS +  G  F  ++   +R 
Sbjct: 8   LPQALHMIPRNPTQSS-KNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSLDTRVRN 67

Query: 66  AFVVRAE-ASSEAESAVEEASEAEVEAVVESDAQPEEEKAPRKPRVKLGDVMGILNKRAI 125
            F+VRAE  ++EAES    A  A+ E  VE   +  E K  RKPR+KLGDVMGILN++AI
Sbjct: 68  EFIVRAEEGNTEAESEEFVAEIADTEGNVE---EVVEAKPTRKPRIKLGDVMGILNQKAI 127

Query: 126 EASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVG 185
           E +EK RP+P+IRTGDIVE+KLEV EN+RRLS+Y+GIV+S+QNAGIHTTIRIRRIIAG+G
Sbjct: 128 EVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIG 187

Query: 186 VEIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 222
           VEIVFP+YSPNI+EIKVVSHRKVRRARLYYLRDKLP+LSTFK
Sbjct: 188 VEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 225

[Close]

BLAST of ClCG10G002370 vs. TAIR10
Match: AT5G47190.1 (AT5G47190.1 Ribosomal protein L19 family protein)

HSP 1 Score: 248.4 bits (633), Expect = 4.0e-66
Identity = 137/231 (59.31%), Postives = 167/231 (72.29%), Query Frame = 1


Query: 2   ASKILPQAVISIPRKPNHCA---------PRRLGFCSAVSVTRVSFSTLSSSSIGCHFHH 61
           +S +LPQA+  IPR P+  +         PR     S +SV+RV F   SSS+ G     
Sbjct: 4   SSHLLPQALHMIPRTPSFSSKNLGVSSILPRASSVNSRLSVSRV-FLNHSSSNFG----F 63

Query: 62  TVAAPLRRAFVVRAEASSEAES--AVEEASEAEVEAVVESDAQPEEEKAPRKPRVKLGDV 121
            + +  R+ F+ +AE S+E E+   VE A E E E   E+    EE K P K RVKLGD+
Sbjct: 64  AIDSKKRKEFIAKAEESTEGETEAVVENAVETEAEGEGEATVAAEEAKPPWKTRVKLGDI 123

Query: 122 MGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIR 181
           MG+LNK+AIE +E  RP+P +RTGDIVE+KLEV EN+RRLS+Y+GIV+S+QNAGIHTTIR
Sbjct: 124 MGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIR 183

Query: 182 IRRIIAGVGVEIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 222
           IRRIIAG+GVEIVFP+YSPNI+EIKVVSHRKVRRARLYYLRDKLP+LSTFK
Sbjct: 184 IRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 229

[Close]

BLAST of ClCG10G002370 vs. TAIR10
Match: AT4G11630.1 (AT4G11630.1 Ribosomal protein L19 family protein)

HSP 1 Score: 138.7 bits (348), Expect = 4.5e-33
Identity = 81/195 (41.54%), Postives = 120/195 (61.54%), Query Frame = 1


Query: 23  RRLGFCSAVSVTRVSFSTLSSSSIGCHFHHTVAAPLRRAFVVRAEASSEAESAVEEASEA 82
           R+LGF S  S    ++   S  + G     + A P +         S+  +S+V+ + E+
Sbjct: 39  RKLGFDSCPSSRAATYLISSLKNAG---FSSSAIPKQNFTYASRCFSTTGDSSVQGSPES 98

Query: 83  EVEAVVESDAQPEEEKAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLE 142
           +          P+  K  R  +     +M I++K A+E     R IP+I+ G IV+LK+E
Sbjct: 99  DCVV-------PQRIKFKRLDKTAK-HIMQIVDKEAVEEVRSLREIPEIKPGYIVQLKVE 158

Query: 143 VQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIKVVSHRKV 202
           V EN+RR+S+ +G+VI+++NAG+++T RIRR++AGVGVE +FPLYSPN+REIKVV  +KV
Sbjct: 159 VPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKVVDKKKV 218

Query: 203 RRARLYYLRDKLPKL 218
           RRA+LYYLRDK+  L
Sbjct: 219 RRAKLYYLRDKVNAL 222

[Close]

BLAST of ClCG10G002370 vs. TAIR10
Match: AT5G11750.1 (AT5G11750.1 Ribosomal protein L19 family protein)

HSP 1 Score: 136.3 bits (342), Expect = 2.2e-32
Identity = 64/108 (59.26%), Postives = 88/108 (81.48%), Query Frame = 1


Query: 110 VMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTI 169
           +M I++K A+E     R IP+I+ G IV+LK+EV EN+RR+S+ +G+VI+++NAG+++T 
Sbjct: 119 IMQIVDKEAVEEVRNLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTF 178

Query: 170 RIRRIIAGVGVEIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKL 218
           RIRR++AGVGVE +FPLYSPN+REIKVV  +KVRRA+LYYLRDK+  L
Sbjct: 179 RIRRLVAGVGVESMFPLYSPNLREIKVVDKKKVRRAKLYYLRDKVNAL 226

[Close]

BLAST of ClCG10G002370 vs. TAIR10
Match: AT1G24240.1 (AT1G24240.1 Ribosomal protein L19 family protein)

HSP 1 Score: 132.1 bits (331), Expect = 4.2e-31
Identity = 82/196 (41.84%), Postives = 117/196 (59.69%), Query Frame = 1


Query: 23  RRLGFCSAVSVTRVSFSTLSSSSIGCHFHHTVAAPLRRAFVVRAEASSEAESAVEEASEA 82
           R+LGF S  S    ++   S  + G             A V +   SS   S   ++   
Sbjct: 38  RKLGFDSFPSTRAATYLISSLKNAGFS---------SLAVVPKQNFSSRCFSTTGDS--- 97

Query: 83  EVEAVVESDAQ-PEEEKAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKL 142
            V+   ESD   P+  K  R  +     +M I++K A+E     R IP+I+ G IV+LK+
Sbjct: 98  -VQGSPESDCVVPQRIKFKRLDKTAK-HIMQIVDKEAVEEVRTLREIPEIKPGYIVQLKV 157

Query: 143 EVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIKVVSHRK 202
           EV EN+RR+S+ +G+VI+++NAG+++T RIRR++AGVGVE +FPLYSPN+R IKVV  +K
Sbjct: 158 EVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLRVIKVVDKKK 217

Query: 203 VRRARLYYLRDKLPKL 218
           VRRA+LYYLR+K+  L
Sbjct: 218 VRRAKLYYLREKVNAL 219

[Close]

BLAST of ClCG10G002370 vs. NCBI nr
Match: gi|449458994|ref|XP_004147231.1| (PREDICTED: 50S ribosomal protein L19-1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 399.8 bits (1026), Expect = 3.0e-108
Identity = 208/221 (94.12%), Postives = 211/221 (95.48%), Query Frame = 1


Query: 1   MASKILPQAVISIPRKPNHCAPRRLGFCSAVSVTRVSFSTLSSSSIGCHFHHTVAAPLRR 60
           MASKILPQAVISIPR PN CAPRRLGFCSAVS TRVSFSTLSSSSIG HFHHTVAAPLRR
Sbjct: 1   MASKILPQAVISIPRNPNQCAPRRLGFCSAVSGTRVSFSTLSSSSIGSHFHHTVAAPLRR 60

Query: 61  AFVVRAEASSEAESAVEEASEAEVEAVVESDAQPEEEKAPRKPRVKLGDVMGILNKRAIE 120
           AFVVRAEA+ EA+SA EEA EAEVEA VESDAQPEEEK  RKPRVKLGDVMGILNKRAIE
Sbjct: 61  AFVVRAEANPEADSAAEEAPEAEVEAAVESDAQPEEEKPSRKPRVKLGDVMGILNKRAIE 120

Query: 121 ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180
           ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV
Sbjct: 121 ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180

Query: 181 EIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 222
           EIVFPLYSPNIREI+VVSHRKVRRARLYYLRDKLPKLSTFK
Sbjct: 181 EIVFPLYSPNIREIRVVSHRKVRRARLYYLRDKLPKLSTFK 221

[Close]

BLAST of ClCG10G002370 vs. NCBI nr
Match: gi|659095823|ref|XP_008448785.1| (PREDICTED: 50S ribosomal protein L19, chloroplastic [Cucumis melo])

HSP 1 Score: 394.8 bits (1013), Expect = 9.8e-107
Identity = 206/221 (93.21%), Postives = 209/221 (94.57%), Query Frame = 1


Query: 1   MASKILPQAVISIPRKPNHCAPRRLGFCSAVSVTRVSFSTLSSSSIGCHFHHTVAAPLRR 60
           MASKILPQAVISIPR PN C PRRLGFCSAVS TRVSFSTLSSSSIG HF HTV+APL+R
Sbjct: 1   MASKILPQAVISIPRNPNQCPPRRLGFCSAVSGTRVSFSTLSSSSIGSHFRHTVSAPLKR 60

Query: 61  AFVVRAEASSEAESAVEEASEAEVEAVVESDAQPEEEKAPRKPRVKLGDVMGILNKRAIE 120
           AFVVRAEA+ EAESA EEA EAEVEA VESDAQPEEEK  RKPRVKLGDVMGILNKRAIE
Sbjct: 61  AFVVRAEANPEAESAAEEAPEAEVEAAVESDAQPEEEKPSRKPRVKLGDVMGILNKRAIE 120

Query: 121 ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180
           ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV
Sbjct: 121 ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180

Query: 181 EIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 222
           EIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK
Sbjct: 181 EIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 221

[Close]

BLAST of ClCG10G002370 vs. NCBI nr
Match: gi|658022227|ref|XP_008346520.1| (PREDICTED: 50S ribosomal protein L19-2, chloroplastic-like [Malus domestica])

HSP 1 Score: 295.0 bits (754), Expect = 1.1e-76
Identity = 160/244 (65.57%), Postives = 193/244 (79.10%), Query Frame = 1


Query: 1   MASKILPQAVISIPRKPNHCAPRRLGFCSAVS-----VTRVSFSTLSSSSIGCHFHHTVA 60
           M SKILPQA+++IPR PN   P +LGF +A++      +RVS S +SSSSIG  F   V+
Sbjct: 1   MGSKILPQALLTIPRNPNEFPPVKLGFSAALARRSSNCSRVSLSRVSSSSIGSVFSPIVS 60

Query: 61  APLRRAFVVRAEASSEAES-AVEEA-----------------SEAEVEAVVESDAQPEEE 120
           A  +R FVVRAE SSE E+ A ++A                 SEAE EAV+ES+  PEE 
Sbjct: 61  AMSKRNFVVRAEPSSEGETGATDDAQEIEAAGRGEASVAVVESEAEAEAVLESE--PEEP 120

Query: 121 KAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV 180
           K PRK RVKLGD+MGILNKRA+EA+E+ERP+PDIRTGD+V++KLEV EN+RRLS+Y+GIV
Sbjct: 121 KPPRKSRVKLGDIMGILNKRAVEAAEQERPVPDIRTGDVVQIKLEVPENKRRLSIYKGIV 180

Query: 181 ISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKL 222
           IS+QNAGIHTTIRIRRIIAG+GVEIVFPLYSPNI+E+KV+SHRKVRRARLYYLRDKLP+L
Sbjct: 181 ISRQNAGIHTTIRIRRIIAGIGVEIVFPLYSPNIKELKVLSHRKVRRARLYYLRDKLPRL 240

[Close]

BLAST of ClCG10G002370 vs. NCBI nr
Match: gi|694391016|ref|XP_009371056.1| (PREDICTED: 50S ribosomal protein L19-2, chloroplastic-like [Pyrus x bretschneideri])

HSP 1 Score: 290.0 bits (741), Expect = 3.4e-75
Identity = 157/246 (63.82%), Postives = 189/246 (76.83%), Query Frame = 1


Query: 1   MASKILPQAVISIPRKPNHCAPRRLGFCSAV-----SVTRVSFSTLSSSSIGCHFHHTVA 60
           M SKILPQA+++IPR PN   P +LGF +A+     + +RV  S +SSSSI   F   V+
Sbjct: 1   MGSKILPQALLTIPRNPNQFPPVKLGFSAALCRRSSNCSRVWLSRVSSSSIESVFSPIVS 60

Query: 61  APLRRAFVVRAEASSEAESA--------------------VEEASEAEVEAVVESDAQPE 120
           A  +R FVVRAE SSE E+                     VE  +EAE EAV+ES+  PE
Sbjct: 61  AMSKRNFVVRAEPSSEGETGATDNAQENEAAGSGEASVAVVESEAEAEAEAVLESE--PE 120

Query: 121 EEKAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRG 180
           E K PRK RVKLGD+MGILNKRA+EA+E+ERP+PDIRTGD+V++KLEV EN+RRLS+Y+G
Sbjct: 121 EPKPPRKSRVKLGDIMGILNKRAVEAAEQERPVPDIRTGDVVQIKLEVPENKRRLSIYKG 180

Query: 181 IVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLP 222
           IVIS+QNAGIHTTIRIRRIIAG+GVEIVFPLYSPNI+E+KV+SHRKVRRARLYYLRDKLP
Sbjct: 181 IVISRQNAGIHTTIRIRRIIAGIGVEIVFPLYSPNIKELKVLSHRKVRRARLYYLRDKLP 240

[Close]

BLAST of ClCG10G002370 vs. NCBI nr
Match: gi|595848026|ref|XP_007209446.1| (hypothetical protein PRUPE_ppa009692mg [Prunus persica])

HSP 1 Score: 290.0 bits (741), Expect = 3.4e-75
Identity = 159/237 (67.09%), Postives = 188/237 (79.32%), Query Frame = 1


Query: 1   MASKILPQAVISIPRKPNHCAPRRLGFCSAVS------VTRVSFSTLSSSSIGCHFHHTV 60
           MASK LPQA+I++PR P H  P +LGF ++ S        RVS S +SSSS G  F   V
Sbjct: 45  MASKALPQALITMPRNPTHHPPVKLGFSASFSRRSSSNSARVSLSRVSSSSFGSSFCPIV 104

Query: 61  AAPLRRAFVVRAEASSEAESAV---EEASEAEVEA----VVESDA---QPEEEKAPRKPR 120
           AA  R  FVVRA++S+E E+     EEASEA VEA    VVES+    +PEE K PRK R
Sbjct: 105 AAMSRLDFVVRADSSTEGEAEAVGSEEASEAIVEAEAEPVVESEPEEPEPEEPKTPRKSR 164

Query: 121 VKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAG 180
           VKLGD+MGILNKRA+EA+ +ERP+PDIRTGD+V++KLEV EN+RRLSVY+GIVIS+QNAG
Sbjct: 165 VKLGDIMGILNKRAVEAAVQERPVPDIRTGDVVQIKLEVPENKRRLSVYKGIVISRQNAG 224

Query: 181 IHTTIRIRRIIAGVGVEIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 222
           IHTTIRIRRIIAG+GVEIVFPLYSPNI+E+KV+SHRKVRRARLYYLRDKLP+ STFK
Sbjct: 225 IHTTIRIRRIIAGIGVEIVFPLYSPNIKELKVLSHRKVRRARLYYLRDKLPRFSTFK 281

The following BLAST results are available for this feature:

BLAST of ClCG10G002370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RK191_ARATH	6.4e-66	62.61	50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana GN=At4g17560 ...	[more]
RK19_SPIOL	6.4e-66	59.83	50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea GN=RPL19 PE=1 SV=2	[more]
RK192_ARATH	7.1e-65	59.31	50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana GN=At5g47190 ...	[more]
RL19_CYAP4	2.8e-21	48.11	50S ribosomal protein L19 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rp...	[more]
RL19_NOSP7	3.1e-20	47.17	50S ribosomal protein L19 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) ...	[more]

BLAST of ClCG10G002370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L237_CUCSA	2.1e-108	94.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017220 PE=4 SV=1	[more]
M5WV30_PRUPE	2.4e-75	67.09	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009692mg PE=4 SV=1	[more]
D7U6T6_VITVI	6.9e-75	65.67	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0616g00020 PE=4 SV=...	[more]
A5B2A3_VITVI	1.3e-73	64.81	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037813 PE=4 SV=1	[more]
A0A067EPG0_CITSI	3.5e-71	65.13	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026573mg PE=4 SV=1	[more]

BLAST of ClCG10G002370 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17560.1	3.6e-67	62.61	Ribosomal protein L19 family protein	[more]
AT5G47190.1	4.0e-66	59.31	Ribosomal protein L19 family protein	[more]
AT4G11630.1	4.5e-33	41.54	Ribosomal protein L19 family protein	[more]
AT5G11750.1	2.2e-32	59.26	Ribosomal protein L19 family protein	[more]
AT1G24240.1	4.2e-31	41.84	Ribosomal protein L19 family protein	[more]

BLAST of ClCG10G002370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458994\|ref\|XP_004147231.1\|	3.0e-108	94.12	PREDICTED: 50S ribosomal protein L19-1, chloroplastic-like [Cucumis sativus]	[more]
gi\|659095823\|ref\|XP_008448785.1\|	9.8e-107	93.21	PREDICTED: 50S ribosomal protein L19, chloroplastic [Cucumis melo]	[more]
gi\|658022227\|ref\|XP_008346520.1\|	1.1e-76	65.57	PREDICTED: 50S ribosomal protein L19-2, chloroplastic-like [Malus domestica]	[more]
gi\|694391016\|ref\|XP_009371056.1\|	3.4e-75	63.82	PREDICTED: 50S ribosomal protein L19-2, chloroplastic-like [Pyrus x bretschneide...	[more]
gi\|595848026\|ref\|XP_007209446.1\|	3.4e-75	67.09	hypothetical protein PRUPE_ppa009692mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001857	Ribosomal_L19
IPR008991	Translation_prot_SH3-like_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G002370.1	ClCG10G002370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001857	Ribosomal protein L19	PRINTS	PR00061	RIBOSOMALL19	coord: 174..197 score: 1.5E-10coord: 115..144 score: 1.5
IPR001857	Ribosomal protein L19	PANTHER	PTHR15680	RIBOSOMAL PROTEIN L19	coord: 1..221 score: 2.5E
IPR001857	Ribosomal protein L19	PFAM	PF01245	Ribosomal_L19	coord: 118..217 score: 6.4
IPR001857	Ribosomal protein L19	TIGRFAMs	TIGR01024	TIGR01024	coord: 119..216 score: 1.4
IPR008991	Translation protein SH3-like domain	unknown	SSF50104	Translation proteins SH3-like domain	coord: 118..221 score: 1.7
None	No IPR available	unknown	Coil	Coil	coord: 65..85 scor
None	No IPR available	PANTHER	PTHR15680:SF10	50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED	coord: 1..221 score: 2.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG10G002370	Cla005606	Watermelon (97103) v1	wcgwmB053
ClCG10G002370	Cla97C10G186950	Watermelon (97103) v2	wcgwmbB038
ClCG10G002370	Bhi11G000057	Wax gourd	wcgwgoB095

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG10G002370	Cucumber (Chinese Long) v3	cucwcgB194
ClCG10G002370	Cucumber (Gy14) v1	cgywcgB556
ClCG10G002370	Cucurbita maxima (Rimu)	cmawcgB281
ClCG10G002370	Cucurbita maxima (Rimu)	cmawcgB515
ClCG10G002370	Cucurbita maxima (Rimu)	cmawcgB727
ClCG10G002370	Cucurbita moschata (Rifu)	cmowcgB272
ClCG10G002370	Cucurbita moschata (Rifu)	cmowcgB513
ClCG10G002370	Cucurbita moschata (Rifu)	cmowcgB730
ClCG10G002370	Wild cucumber (PI 183967)	cpiwcgB190
ClCG10G002370	Cucumber (Chinese Long) v2	cuwcgB189
ClCG10G002370	Melon (DHL92) v3.5.1	mewcgB415
ClCG10G002370	Cucurbita pepo (Zucchini)	cpewcgB189
ClCG10G002370	Cucurbita pepo (Zucchini)	cpewcgB631
ClCG10G002370	Cucurbita pepo (Zucchini)	cpewcgB766
ClCG10G002370	Bottle gourd (USVL1VR-Ls)	lsiwcgB389
ClCG10G002370	Cucumber (Gy14) v2	cgybwcgB174
ClCG10G002370	Melon (DHL92) v3.6.1	medwcgB401
ClCG10G002370	Silver-seed gourd	carwcgB0549
ClCG10G002370	Silver-seed gourd	carwcgB0754