ClCG10G001990 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG10G001990
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Unknown protein
Location	CG_Chr10 : 2205794 .. 2207352 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAATGTTCAGAGAGCAGATGAAAAAAGTCGACAAAACACAACAAGCTAGCAGAGACCATAGAAAACAAGTTGAAACTTTCACGGTAAAGAGTCGCTTATATGTTGATGCCTTATCCTCTTCTGAAAAGTACTCAGATGATTCCGAAACCTCAGAACCATCAATACCAACTTCTGATACATCTCTAGAAAACAAGGACATATGGTTTTATAAAACAGATAAGGAAGACCATTTCAACTGGGAAAAGATGATCATACTAACCAGAAGATGTTTCCATGATGACTGTGTCAGGATTATAGAGACTCTAAGAGAATGAAATGATGTCATTGACTACTTTCATCTGTTTCATGCAGATAAGGCGATCCTAACCATTAGAGACACAAAACAAGCCTGTCCCCTTTGCCTAAATGATGATTGGGTCACAGTTGGAACATTTACTGTTAAGTTTAAAAATTGGTCTCCACAAGAACACGCAAAGCCAAAATTTATCCCAAGCTATGGTGGATGGCTGAGATTCAGAGGGATTCCTCTACACGCTTGGAACATACACACTTTTGAACAAATAGGCTTTGCTTGTGGTGGACTGCTAGACATTAGTTTCAACACCTGGAGAAAGTTTGACCTAACAGAAGTCGTAATCAAAGTTAGAGAAAACTATTGTGGCTTCATCCCAGCTGAAATTAAAATAATCACTGAAAACAAAGAAATTTTCACGGTACACATGGTTGTGAAGCCGAGGGGGAAATGGCTCTCCAAAAAACATCCCAGCATCTATGGCACATTCTCTAGGGAAGCTGCTGCCACTTTCGATTTTTCTGACCCAAATGCAGAGACTTTCCATATTCATGATGGAGTGGCCAGAGCTTTCCTACACGACAACCCAAAAAATAGTGAAAAGATTAATATAGCAGCCAATAGGGGAAAAAGAGAAGGAAAATCGATTGTCATAGAGGAAGCAGGAGACATTTCACACGGGGAAGATACGGTTGAGAAAAGGTGGGCTCAGACAAATCGTAAGAAAAAAGGGTCTCTTTCACTTCTCCAAAGTCAACTACCGTATTTTACAAACCACAGATAGCCCCTACTTATTCATTTGTTGAGGAAGGACCAAGTTATCAGACCCAAATCAGCCCCATAGATAAAACTGATACACAAGAATAGGCCCAAGAAGCCCAACTCGAAAATACCCAAGTTCAGGTCATTGGGAAATTAGCTGAAAAGGAGACAGAAAAAGATTTTGGCCCAAAAATCCTAAAACGCGATAGTTTTCAGAACACCAATCCGGCAGGAAAAGAGAACCCAATCATCCAGCAAAATATAGATGGAATTTATATCGATCTGAATGAATACTCCCCTACTACTGCGGTCATGGTATCGAGTCCAGAAGGCTCACCTACAGAGCCAATTATTGAGACACGCGAGGCTCTTAATTGTATTGTGCAAATTTCCTTTGAAAGCAATCTTGAACAGTCATTTGAAGAGGTGCAGGAAATTCAAGAAGCTCAAGATATACATAAGGAGGAGGCTGATCCCGCCAAAATGAACTTTGAAACATAG

mRNA sequence

ATGTTAATGTTCAGAGAGCAGATGAAAAAAGTCGACAAAACACAACAAGCTAGCAGAGACCATAGAAAACAAGTTGAAACTTTCACGGTAAAGAGTCGCTTATATGTTGATGCCTTATCCTCTTCTGAAAAGTACTCAGATGATTCCGAAACCTCAGAACCATCAATACCAACTTCTGATACATCTCTAGAAAACAAGGACATATGGTTTTATAAAACAGATAAGGAAGACCATTTCAACTGGGAAAAGATGATCATACTAACCAGAAGATGTTTCCATGATGACTATAAGGCGATCCTAACCATTAGAGACACAAAACAAGCCTGTCCCCTTTGCCTAAATGATGATTGGGTCACAGTTGGAACATTTACTGTTAAGTTTAAAAATTGGTCTCCACAAGAACACGCAAAGCCAAAATTTATCCCAAGCTATGGTGGATGGCTGAGATTCAGAGGGATTCCTCTACACGCTTGGAACATACACACTTTTGAACAAATAGGCTTTGCTTGTGGTGGACTGCTAGACATTAGTTTCAACACCTGGAGAAAGTTTGACCTAACAGAAGTCGTAATCAAAGTTAGAGAAAACTATTGTGGCTTCATCCCAGCTGAAATTAAAATAATCACTGAAAACAAAGAAATTTTCACGGTACACATGGTTGTGAAGCCGAGGGGGAAATGGCTCTCCAAAAAACATCCCAGCATCTATGGCACATTCTCTAGGGAAGCTGCTGCCACTTTCGATTTTTCTGACCCAAATGCAGAGACTTTCCATATTCATGATGGAGTGGCCAGAGCTTTCCTACACGACAACCCAAAAAATAGTGAAAAGATTAATATAGCAGCCAATAGGGGAAAAAGAGAAGGAAAATCGATTGTCATAGAGGAAGCAGGAGACATTTCACACGGGGAAGATACGGTTGAGAAAAGGTGGGCTCAGACAAATCGAAAAGAGAACCCAATCATCCAGCAAAATATAGATGGAATTTATATCGATCTGAATGAATACTCCCCTACTACTGCGGTCATGGTATCGAGTCCAGAAGGCTCACCTACAGAGCCAATTATTGAGACACGCGAGGCTCTTAATTGTATTGTGCAAATTTCCTTTGAAAGCAATCTTGAACAGTCATTTGAAGAGGTGCAGGAAATTCAAGAAGCTCAAGATATACATAAGGAGGAGGCTGATCCCGCCAAAATGAACTTTGAAACATAG

Coding sequence (CDS)

ATGTTAATGTTCAGAGAGCAGATGAAAAAAGTCGACAAAACACAACAAGCTAGCAGAGACCATAGAAAACAAGTTGAAACTTTCACGGTAAAGAGTCGCTTATATGTTGATGCCTTATCCTCTTCTGAAAAGTACTCAGATGATTCCGAAACCTCAGAACCATCAATACCAACTTCTGATACATCTCTAGAAAACAAGGACATATGGTTTTATAAAACAGATAAGGAAGACCATTTCAACTGGGAAAAGATGATCATACTAACCAGAAGATGTTTCCATGATGACTATAAGGCGATCCTAACCATTAGAGACACAAAACAAGCCTGTCCCCTTTGCCTAAATGATGATTGGGTCACAGTTGGAACATTTACTGTTAAGTTTAAAAATTGGTCTCCACAAGAACACGCAAAGCCAAAATTTATCCCAAGCTATGGTGGATGGCTGAGATTCAGAGGGATTCCTCTACACGCTTGGAACATACACACTTTTGAACAAATAGGCTTTGCTTGTGGTGGACTGCTAGACATTAGTTTCAACACCTGGAGAAAGTTTGACCTAACAGAAGTCGTAATCAAAGTTAGAGAAAACTATTGTGGCTTCATCCCAGCTGAAATTAAAATAATCACTGAAAACAAAGAAATTTTCACGGTACACATGGTTGTGAAGCCGAGGGGGAAATGGCTCTCCAAAAAACATCCCAGCATCTATGGCACATTCTCTAGGGAAGCTGCTGCCACTTTCGATTTTTCTGACCCAAATGCAGAGACTTTCCATATTCATGATGGAGTGGCCAGAGCTTTCCTACACGACAACCCAAAAAATAGTGAAAAGATTAATATAGCAGCCAATAGGGGAAAAAGAGAAGGAAAATCGATTGTCATAGAGGAAGCAGGAGACATTTCACACGGGGAAGATACGGTTGAGAAAAGGTGGGCTCAGACAAATCGAAAAGAGAACCCAATCATCCAGCAAAATATAGATGGAATTTATATCGATCTGAATGAATACTCCCCTACTACTGCGGTCATGGTATCGAGTCCAGAAGGCTCACCTACAGAGCCAATTATTGAGACACGCGAGGCTCTTAATTGTATTGTGCAAATTTCCTTTGAAAGCAATCTTGAACAGTCATTTGAAGAGGTGCAGGAAATTCAAGAAGCTCAAGATATACATAAGGAGGAGGCTGATCCCGCCAAAATGAACTTTGAAACATAG

Protein sequence

MLMFREQMKKVDKTQQASRDHRKQVETFTVKSRLYVDALSSSEKYSDDSETSEPSIPTSDTSLENKDIWFYKTDKEDHFNWEKMIILTRRCFHDDYKAILTIRDTKQACPLCLNDDWVTVGTFTVKFKNWSPQEHAKPKFIPSYGGWLRFRGIPLHAWNIHTFEQIGFACGGLLDISFNTWRKFDLTEVVIKVRENYCGFIPAEIKIITENKEIFTVHMVVKPRGKWLSKKHPSIYGTFSREAAATFDFSDPNAETFHIHDGVARAFLHDNPKNSEKINIAANRGKREGKSIVIEEAGDISHGEDTVEKRWAQTNRKENPIIQQNIDGIYIDLNEYSPTTAVMVSSPEGSPTEPIIETREALNCIVQISFESNLEQSFEEVQEIQEAQDIHKEEADPAKMNFET

Homology

[Close]

BLAST of ClCG10G001990 vs. TrEMBL
Match: E5GB30_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.0e-44
Identity = 98/267 (36.70%), Postives = 151/267 (56.55%), Query Frame = 1


Query: 60  DTSLENKDIWFYKTDKEDHFNWE--------KMIILTRRCFHDDY--------------- 119
           DT L  +  +F K   E++  W         + ++LTRR FHDD+               
Sbjct: 101 DTPLTTR--FFLKKRFEEYCLWVQKTYNRKGRTVVLTRRYFHDDWEKIVEKLNEQLDTTV 160

Query: 120 --------KAILTIRDTKQACPLCLNDDWVTVGTFTVKFKNWSPQEHAKPKFIPSYGGWL 179
                   KA++  +D +QA  +C N  W TVG F VKF+ W+ ++HA PKF+PSYGGW+
Sbjct: 161 SYKPFHANKALICFKDFEQANLICKNKGWTTVGRFYVKFEEWNQKDHASPKFVPSYGGWI 220

Query: 180 RFRGIPLHAWNIHTFEQIGFACGGLLDISFNTWRKFDLTEVVIKVRENYCGFIPAEIKII 239
           + R +PLHAWN+ +F QIG ACGG ++++  T    DL E  I+V++NY GFIPA IK+I
Sbjct: 221 KVRAVPLHAWNLESFVQIGDACGGFMEVAKETRELTDLIEASIRVKDNYSGFIPAFIKLI 280

Query: 240 TENKEIFTVHMVVKPRGKWLSKKHPSIYGTFSREAAATFDFSDPNAETFHIHDGVARAFL 296
            + +  + + ++VK  GKW   ++PSI+GTF+REAA  FD  + N+E +     +A    
Sbjct: 281 DKEERSYIIQVIVKTEGKWHLGRNPSIHGTFTREAARRFDEFNLNSEQYFFEGNLA---- 340

[Close]

BLAST of ClCG10G001990 vs. TrEMBL
Match: A0A0A0KFP0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367105 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 6.3e-26
Identity = 57/151 (37.75%), Postives = 91/151 (60.26%), Query Frame = 1


Query: 76  EDHFNWEKMIILTRRCFHDDYKAILTIRDTKQACPLCLNDDWVTVGTFTVKFKNWSPQEH 135
           ++  NW      T + FH + KA+++  +  QA  +C N  W  V  F +KF+ W+  +H
Sbjct: 5   KEQTNWS----FTYKSFHAE-KALVSFENKYQATIMCKNRGWNPVDKFYIKFEEWNTMKH 64

Query: 136 AKPKFIPSYGGWLRFRGIPLHAWNIHTFEQIGFACGGLLDISFNTWRKFDLTEVVIKVRE 195
             PK +PSYGGW+ FRGI +HAW++ TF QIG ACG  ++I+    ++ ++ + ++KV+E
Sbjct: 65  GSPKLVPSYGGWVNFRGILMHAWDMETFTQIGEACGSFIEITREIKKQVEIRQAMLKVKE 124

Query: 196 NYCGFIPAEIKIITENKEIFTVHMVVKPRGK 227
           N+ GFIPA I +  +    F V  +V+  GK
Sbjct: 125 NFTGFIPAFINVFDKKGNSFLVQSIVQAEGK 150

[Close]

BLAST of ClCG10G001990 vs. TrEMBL
Match: A0A0A0KNC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G465580 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 6.1e-21
Identity = 57/167 (34.13%), Postives = 87/167 (52.10%), Query Frame = 1


Query: 35  YVDALSSSEKYSDDSETSEPSIPTSDTSLENKDIWFYKTDKEDHFNWEKMIILTRRCFHD 94
           YV+ L+     + DS    P+   +DT  + K+    +  K + F+W K  ++T+RCFHD
Sbjct: 130 YVEVLTKGSLSNSDS----PNSYNADTKEKKKEDTTAR--KFETFDWSKTEVITKRCFHD 189

Query: 95  DYKAILT------------------------IRDTKQACPLCLNDDWVTVGTFTVKFKNW 154
           D+K I+                         + +      LC N  W T+G F VKF+ W
Sbjct: 190 DWKKIMEKLQEQLDHLNITYKLFHAEKAMVFLEEKNMVNLLCKNRGWTTIGKFYVKFEAW 249

Query: 155 SPQEHAKPKFIPSYGGWLRFRGIPLHAWNIHTFEQIGFACGGLLDIS 178
           +  +HA PK + SY GW++F+GIPLHAWN  +F QIG  CGG ++++
Sbjct: 250 NISKHATPKVLSSYVGWVKFKGIPLHAWNYSSFYQIGEVCGGFVEVA 290

[Close]

BLAST of ClCG10G001990 vs. TrEMBL
Match: A0A0A0K120_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G004025 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.4e-09
Identity = 51/175 (29.14%), Postives = 74/175 (42.29%), Query Frame = 1


Query: 1   MLMFREQMKKVDKTQQASRDHRKQVETFTVKSRL------YVDALSSSEKYSDDSETSEP 60
           ML  R++  +  K    + D  K+  +++  S L      Y   L++S      S++  P
Sbjct: 1   MLTLRKEAAQKRKMTTTTEDRGKKASSYSSLSELDSPRKSYTKVLTNSSS----SDSGSP 60

Query: 61  SIPTSDTSLENKDIWFYKTDKEDHFNWEKMIILTRRCFHDDYKAIL-------------- 120
            I  S    E        T   D  +W K +++TRR FHDD+K I+              
Sbjct: 61  KILPSSNKKEETP-----TGAFDSLDWTKTVVITRRYFHDDWKKIMAKLQEQLDLNITYK 120

Query: 121 ---------TIRDTKQACPLCLNDDWVTVGTFTVKFKNWSPQEHAKPKFIPSYGG 147
                    TI D      LC N  W TVG + VKF+  +  +HA PK +PSYGG
Sbjct: 121 PFHAEKVAVTIEDKNLVNLLCKNRGWTTVGKYYVKFEASNIAKHASPKCLPSYGG 166

[Close]

BLAST of ClCG10G001990 vs. TrEMBL
Match: A5ANF1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029348 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 5.6e-06
Identity = 51/200 (25.50%), Postives = 92/200 (46.00%), Query Frame = 1


Query: 121 GTFTVKFKNWSPQEHAK--PKFIPSYGGWLRFRGIPLHAWNIHTFEQIGFACGGLLDISF 180
           G  +V+ + WSP+E+A+   KF    GGW+  RG+P H W+    ++I    G + +I +
Sbjct: 445 GRISVQMRRWSPKENAEIEGKF---RGGWIELRGLPFHLWSEVHLKKIVEQWGTVTEIDW 504

Query: 181 NTWRKFDLTEVVIKVRENYCGFIPAEIKIITENKEIFTVHMVVKPRGKWLSKKHPSIYGT 240
            T + FDL++  I++       +PA ++ +T+ + +FTV +VV         +  S+ G 
Sbjct: 505 CTLKLFDLSKARIRIAMKERSVLPALLE-VTDGEWVFTVAVVVVGEE---DCRRGSVQGK 564

Query: 241 FSREAAATFDFSDPNAETFHIHDGVARAFLHDNPKNSEKINIAANRGKREGKSIVIEEAG 300
            +REA A+   +        I          +    + K       G+  G ++V+ E G
Sbjct: 565 STREAFASNTGTGAGRRVEKIRSTAGGRCRVEEDNRTRK-------GEERGGAVVVAE-G 624

Query: 301 DISHGEDTVEKRWAQTNRKE 319
             S G  T       +N+K+
Sbjct: 625 TRSKGVQTQSLPNLNSNKKD 629

[Close]

BLAST of ClCG10G001990 vs. NCBI nr
Match: gi|307135793|gb|ADN33672.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 187.2 bits (474), Expect = 5.7e-44
Identity = 98/267 (36.70%), Postives = 151/267 (56.55%), Query Frame = 1


Query: 60  DTSLENKDIWFYKTDKEDHFNWE--------KMIILTRRCFHDDY--------------- 119
           DT L  +  +F K   E++  W         + ++LTRR FHDD+               
Sbjct: 101 DTPLTTR--FFLKKRFEEYCLWVQKTYNRKGRTVVLTRRYFHDDWEKIVEKLNEQLDTTV 160

Query: 120 --------KAILTIRDTKQACPLCLNDDWVTVGTFTVKFKNWSPQEHAKPKFIPSYGGWL 179
                   KA++  +D +QA  +C N  W TVG F VKF+ W+ ++HA PKF+PSYGGW+
Sbjct: 161 SYKPFHANKALICFKDFEQANLICKNKGWTTVGRFYVKFEEWNQKDHASPKFVPSYGGWI 220

Query: 180 RFRGIPLHAWNIHTFEQIGFACGGLLDISFNTWRKFDLTEVVIKVRENYCGFIPAEIKII 239
           + R +PLHAWN+ +F QIG ACGG ++++  T    DL E  I+V++NY GFIPA IK+I
Sbjct: 221 KVRAVPLHAWNLESFVQIGDACGGFMEVAKETRELTDLIEASIRVKDNYSGFIPAFIKLI 280

Query: 240 TENKEIFTVHMVVKPRGKWLSKKHPSIYGTFSREAAATFDFSDPNAETFHIHDGVARAFL 296
            + +  + + ++VK  GKW   ++PSI+GTF+REAA  FD  + N+E +     +A    
Sbjct: 281 DKEERSYIIQVIVKTEGKWHLGRNPSIHGTFTREAARRFDEFNLNSEQYFFEGNLA---- 340

[Close]

BLAST of ClCG10G001990 vs. NCBI nr
Match: gi|659071590|ref|XP_008460776.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis melo])

HSP 1 Score: 175.6 bits (444), Expect = 1.7e-40
Identity = 94/229 (41.05%), Postives = 131/229 (57.21%), Query Frame = 1


Query: 41  SSEKYSDDSETSEPS---IPTSDTSLENKDIWFYKTDKEDHFNWEKMI---------ILT 100
           SS+ YS DS  S  +   +  S   LEN  +   +   +D   W K++           T
Sbjct: 176 SSDSYSSDSSHSSGNSLCVSPSFDLLENTVVIIRRFFHDD---WYKILQNLRKQTEESFT 235

Query: 101 RRCFHDDYKAILTIRDTKQACPLCLNDDWVTVGTFTVKFKNWSPQEHAKPKFIPSYGGWL 160
              FH D KA++    +  A  LC N  W TVG ++V+F+ W P +HA PK IPSYGGW 
Sbjct: 236 YNAFHAD-KALVHFSSSIPANLLCQNKGWTTVGKYSVRFEKWCPIQHATPKLIPSYGGWT 295

Query: 161 RFRGIPLHAWNIHTFEQIGFACGGLLDISFNTWRKFDLTEVVIKVRENYCGFIPAEIKII 220
            FRGIPLH WN+ TF+QIG ACGGL+ ++  T    +L E  IK+R NY GF+PA ++I 
Sbjct: 296 IFRGIPLHLWNMKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPANVRIF 355

Query: 221 TENKEIFTVHMVVKPRGKWLSKKHPSIYGTFSREAAATFDFSDPNAETF 258
                 F++ +V  P GKWL +++  ++GTF R+AAA FD  +P +E F
Sbjct: 356 DNEGNKFSIQVVTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQF 400

[Close]

BLAST of ClCG10G001990 vs. NCBI nr
Match: gi|700192460|gb|KGN47664.1| (hypothetical protein Csa_6G367105 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 9.1e-26
Identity = 57/151 (37.75%), Postives = 91/151 (60.26%), Query Frame = 1


Query: 76  EDHFNWEKMIILTRRCFHDDYKAILTIRDTKQACPLCLNDDWVTVGTFTVKFKNWSPQEH 135
           ++  NW      T + FH + KA+++  +  QA  +C N  W  V  F +KF+ W+  +H
Sbjct: 5   KEQTNWS----FTYKSFHAE-KALVSFENKYQATIMCKNRGWNPVDKFYIKFEEWNTMKH 64

Query: 136 AKPKFIPSYGGWLRFRGIPLHAWNIHTFEQIGFACGGLLDISFNTWRKFDLTEVVIKVRE 195
             PK +PSYGGW+ FRGI +HAW++ TF QIG ACG  ++I+    ++ ++ + ++KV+E
Sbjct: 65  GSPKLVPSYGGWVNFRGILMHAWDMETFTQIGEACGSFIEITREIKKQVEIRQAMLKVKE 124

Query: 196 NYCGFIPAEIKIITENKEIFTVHMVVKPRGK 227
           N+ GFIPA I +  +    F V  +V+  GK
Sbjct: 125 NFTGFIPAFINVFDKKGNSFLVQSIVQAEGK 150

[Close]

BLAST of ClCG10G001990 vs. NCBI nr
Match: gi|700195958|gb|KGN51135.1| (hypothetical protein Csa_5G465580 [Cucumis sativus])

HSP 1 Score: 110.2 bits (274), Expect = 8.8e-21
Identity = 57/167 (34.13%), Postives = 87/167 (52.10%), Query Frame = 1


Query: 35  YVDALSSSEKYSDDSETSEPSIPTSDTSLENKDIWFYKTDKEDHFNWEKMIILTRRCFHD 94
           YV+ L+     + DS    P+   +DT  + K+    +  K + F+W K  ++T+RCFHD
Sbjct: 130 YVEVLTKGSLSNSDS----PNSYNADTKEKKKEDTTAR--KFETFDWSKTEVITKRCFHD 189

Query: 95  DYKAILT------------------------IRDTKQACPLCLNDDWVTVGTFTVKFKNW 154
           D+K I+                         + +      LC N  W T+G F VKF+ W
Sbjct: 190 DWKKIMEKLQEQLDHLNITYKLFHAEKAMVFLEEKNMVNLLCKNRGWTTIGKFYVKFEAW 249

Query: 155 SPQEHAKPKFIPSYGGWLRFRGIPLHAWNIHTFEQIGFACGGLLDIS 178
           +  +HA PK + SY GW++F+GIPLHAWN  +F QIG  CGG ++++
Sbjct: 250 NISKHATPKVLSSYVGWVKFKGIPLHAWNYSSFYQIGEVCGGFVEVA 290

[Close]

BLAST of ClCG10G001990 vs. NCBI nr
Match: gi|657973679|ref|XP_008378648.1| (PREDICTED: uncharacterized protein LOC103441727 [Malus domestica])

HSP 1 Score: 75.5 bits (184), Expect = 2.4e-10
Identity = 50/185 (27.03%), Postives = 84/185 (45.41%), Query Frame = 1


Query: 56  IPTSDTSLENKDIWFYKTDKEDHFNWEKMIILTRRCFHDDYKAI---------LTIRDTK 115
           IP +   +  K IW      ++ ++W  +++  R+  H  ++ +         + IR + 
Sbjct: 177 IPNAIEEIWIKKIWNKSDISKESYSWGSVVVCERQVVHQPWREVEASLLKLLGMEIRLSP 236

Query: 116 QACP----LCLNDDWVT----VGTFT------VKFKNWSPQEHAKPKFIPSYGGWLRFRG 175
             C     +C N++  T     GT T      V    W    ++  +   SYGGW+   G
Sbjct: 237 FQCNKALFVCQNEEEATKIAKFGTLTMNKLPDVVLSGWWDSINSNHRKAVSYGGWVALEG 296

Query: 176 IPLHAWNIHTFEQIGFACGGLLDISFNTWRKFDLTEVVIKVRENYCGFIPAEIKIITENK 218
           +P H W I+ F++IG ACGGL++I   T     L E  +K++ N  GFIP E   + +  
Sbjct: 297 LPSHLWTINFFQKIGEACGGLVEIDRRTANFGFLLEAKLKLKPNDTGFIP-EFVDVADGD 356

The following BLAST results are available for this feature:

BLAST of ClCG10G001990 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GB30_CUCME	4.0e-44	36.70	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0KFP0_CUCSA	6.3e-26	37.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367105 PE=4 SV=1	[more]
A0A0A0KNC5_CUCSA	6.1e-21	34.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G465580 PE=4 SV=1	[more]
A0A0A0K120_CUCSA	2.4e-09	29.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G004025 PE=4 SV=1	[more]
A5ANF1_VITVI	5.6e-06	25.50	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029348 PE=4 SV=1	[more]

BLAST of ClCG10G001990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|307135793\|gb\|ADN33672.1\|	5.7e-44	36.70	hypothetical protein [Cucumis melo subsp. melo]	[more]
gi\|659071590\|ref\|XP_008460776.1\|	1.7e-40	41.05	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis me...	[more]
gi\|700192460\|gb\|KGN47664.1\|	9.1e-26	37.75	hypothetical protein Csa_6G367105 [Cucumis sativus]	[more]
gi\|700195958\|gb\|KGN51135.1\|	8.8e-21	34.13	hypothetical protein Csa_5G465580 [Cucumis sativus]	[more]
gi\|657973679\|ref\|XP_008378648.1\|	2.4e-10	27.03	PREDICTED: uncharacterized protein LOC103441727 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025558	DUF4283

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G001990.1	ClCG10G001990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 118..186 score: 2.
None	No IPR available	unknown	Coil	Coil	coord: 374..394 scor

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG10G001990	Cucurbita moschata (Rifu)	cmowcgB730
ClCG10G001990	Wild cucumber (PI 183967)	cpiwcgB190
ClCG10G001990	Wild cucumber (PI 183967)	cpiwcgB192
ClCG10G001990	Cucumber (Chinese Long) v2	cuwcgB189
ClCG10G001990	Cucumber (Chinese Long) v2	cuwcgB191
ClCG10G001990	Melon (DHL92) v3.5.1	mewcgB317
ClCG10G001990	Melon (DHL92) v3.5.1	mewcgB415
ClCG10G001990	Watermelon (97103) v1	wcgwmB045
ClCG10G001990	Watermelon (97103) v1	wcgwmB056
ClCG10G001990	Cucurbita pepo (Zucchini)	cpewcgB189
ClCG10G001990	Cucurbita pepo (Zucchini)	cpewcgB631
ClCG10G001990	Cucurbita pepo (Zucchini)	cpewcgB773
ClCG10G001990	Bottle gourd (USVL1VR-Ls)	lsiwcgB320
ClCG10G001990	Bottle gourd (USVL1VR-Ls)	lsiwcgB389
ClCG10G001990	Cucumber (Gy14) v2	cgybwcgB174
ClCG10G001990	Cucumber (Gy14) v2	cgybwcgB176
ClCG10G001990	Melon (DHL92) v3.6.1	medwcgB312
ClCG10G001990	Melon (DHL92) v3.6.1	medwcgB401
ClCG10G001990	Silver-seed gourd	carwcgB0549
ClCG10G001990	Silver-seed gourd	carwcgB0683
ClCG10G001990	Silver-seed gourd	carwcgB0754
ClCG10G001990	Cucumber (Chinese Long) v3	cucwcgB194
ClCG10G001990	Cucumber (Chinese Long) v3	cucwcgB196
ClCG10G001990	Watermelon (97103) v2	wcgwmbB038
ClCG10G001990	Watermelon (97103) v2	wcgwmbB053
ClCG10G001990	Wax gourd	wcgwgoB095
ClCG10G001990	Wax gourd	wcgwgoB114
ClCG10G001990	Watermelon (Charleston Gray)	wcgwcgB003
ClCG10G001990	Watermelon (Charleston Gray)	wcgwcgB052
ClCG10G001990	Cucumber (Gy14) v1	cgywcgB535
ClCG10G001990	Cucumber (Gy14) v1	cgywcgB556
ClCG10G001990	Cucurbita maxima (Rimu)	cmawcgB281
ClCG10G001990	Cucurbita maxima (Rimu)	cmawcgB515
ClCG10G001990	Cucurbita maxima (Rimu)	cmawcgB727
ClCG10G001990	Cucurbita moschata (Rifu)	cmowcgB272
ClCG10G001990	Cucurbita moschata (Rifu)	cmowcgB513