ClCG10G001300 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG10G001300
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Cysteine-rich receptor-like protein kinase
Location	CG_Chr10 : 1326427 .. 1339373 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCTTTTTGCTGGTTTGAAAGATTTTCAGTCATGGGAATCAATTTCTAGAAAGGTTTTCATCTTTCTTAGTATGAATGGATGTACTATTTATTATCTTCCTCATATTAATGAAAAAAACCTCCGTGTACCTTGAATAGATTTATTTAAAGAATTCTTTGAGAGGGATATCTTGAATAGATTTATTTCTAAAACGTTTTGCCTCATCCCAAAGAAGGATAAAGCTAATTGGGTCAAGGATTTCAGACCTATTAGTCTTATCACTAGTGTTTATAAGATTCTGGCCAAGGTCCTTGCAAATCACCTTAGGAAAGTGCTTCCTTCCACCATTTCAGACTCACAAGGTGCTTTTATAGTAGGGAGAAAGATCCTTGACCAAGCCCTCCTTACTAATGAAGCTGTTGAGGATTATAGAGCCAAAAGGAAGGAAGGAGTGGTTTTTAAAATTGACTTCGAAAAGGCACATGACCATGTTGATTGGGACTTTCTAGATAAGGTGATGGATGAGAAAGGTTCTGGGTATAAATGGAGAATGTGGATGTGGAGCTGTGTCAGGAATGTGAGTTACTCACTCCTTGTGAATGGAACTCCTAAGGGATCAAGCAAGGCTTCTAGGGGTTAAGATCGGGGGACCCTCTTTCGTGCTTTTAATTCCTCCTAGTTGTGGACATTTTGAGTAGACTCATCCTGAAGGGGGTGGAAGGTAACATTATCAAACCCTTTAAGGTTGGTTTGAAGGACGTGGCATGGTCTTAAAACTATGTTTTTTTGCTCTAGCAAAGAGGACTGCTTTAGGAACCTTAATCACTGTTTCGGGTTTCTTTGAGGCAATCCCTGGGCTTAAAATCAACAGGAACAAGTGTCAGATTCTGGGATTCAATTGTGATCAGGAGAAACTAAGGAGTTGTGATGGTGTGATTGGTTGTGAAGTGGGGTCCTTTCCTTCTTCTTACCTTGGCCTCTCCGTTGGGGGAAATTTGAGGGCTATCTCTTTCTTGGATTCTCTGCTTGAAAAGATTAGGAAGAGGTTAGCTTCGTGGAAGAAAAGTTTCTTTTCCAAAGCTGGAAGACTTACCTTAGCCAAGTCGGTGTTGGGTGGCATTCTCATTTATTATCTCTCCCTTTTTTGGGCCTTAGTTTGGTGTGCAAGAGTATGGAAAGCCTCATGAGAGATTTTCTCACGGTAGGGGTGGATGGAGGGAAAGGCTCTCTTTTGGTCGGTCGGGAGGTTATTGGGAGATCTGTTAACTAGGGGGGTTAAAGCTCAGAATCTAAGATTACGCAACAAAGCGTTGTTGGCTAAATGGCTTTGGTGGTTTTCCTCTGAACTTGAATCTTTGTGGCATAGGATTATTTTACCCATCCTTTTTGAACGATTGTCCAAGGGGGTTAAAGGTACATTTTGGAATTCATGGAAACATATTTCTCTTGAGCTCCCTTCTCTCTTGGAAGATCAGTGGGTAGGAGTTAGACCCCTCTGCTCTGCATTTCCTCATTCATATCATCTTTCTTCTTATAAAAGTCGTCCTGTTTCTAGTATGTTGGTTTGGTCTAGGAGCTCGATGTCTTTTTCCTTTGGTTTTCATTGTTCTTTGTCCGATAGGGAAGCAAGGAAGGTTGCCTCTTTGTTGTCCTTACTTGATGAGGTCAAGTTTAGGCTGGGGAGAAGGGATGTTTGCATTGGGAGTCCTAATCCTCTTGAGGGTTTTTCTTAAATCCTTTTTTCGGCTGTTATTGGATCCCTCCCCTGTTAGCAAGTAGGTCTTTGATGTGCTTTGGAGGATTAAGATCCTTAAGAAAGTTAAATTCTTTACCCGACAAGTTTTACTTGGCCGGGTGAACACTATGGATAGGCTTCTAAGGAAGAAGTCTTCGCTTATGGGGCCTTTTTGTTGTATTCTTTGTCAGAAGGCGGAGGAAGACCTAGGTCACCTTCTTTGGAGTTGTCAATTTGCGAGATAGGCATGGAACTTTTTCTTTTAAGAGTTTGATATCAAGCTAGCTCACTAGAGAGATGTTCGGGAGACGATCGAGGGGTTCCTTCTCCATCTGCACTTTGAAAAGAAAGGTTGATTTTTATAGTTAGTAGGTGTGTGTGCTATCTTGTGGGATATATGGGGGGAGAGGAATAACAAAGTGTTTAGAGGTGTGTAAGGGTGAGCATCTGTCAGTTGAGTTTCCGACGCCCGCCACCCACACGTTGATTTAAATTGGTCGGTTTCCTTTGGTCTCGGGATTGTTGAGAATGCGGATCAGCTGATCATGTGGTTGGTCTTGTCGGTTCCATATTTGAACCGGCGAACTAGAAAAGAAGTGAAAAAATGGAGAAAGAAAGAAAGGGGGAAGAGAGAAGAAAAAGAAAAAAAAAATGAAGATAGAAAGGAAGTGAGAAACAGAGAAGGAAAAACACGTGAAAAGTAAAATAAGAAAGAGAGAATGAATAAAACAAAACAATTGAGATTGAGAAGTAAAAATGAAGGAGAAATGGAGAAGAGGAGAAATGGTGAAATGAAGAAAAAGAAAGAGGAGAAAAAATGAGGTAGATTATGTGAGAGAGGAGAGAAAAAGAGGGGAAAGAAGAGAGAAAAGGGAAAAGTCGAGTGCAGATTCTTGGGAGTTGGGAGAGGAGAGAAGAAAGAGAATGAAATTAATTATTTATTTTATAAATTTAAAGTAGTTTTTTGAGAAAACCATTATTACCCATGGTTTGGGGCATTAATGAGATGTGACCTTTGACCATTATTATTTCCCATCATCCCATGCATATACATTTTTTTTTTTCCAAAATTAATGGGCATATTGGTTCGGTCGGCTTTTTCTCATTTTTTGCATTTCGACCGGCCACACTTTAGTTTTTATTTACAAAAAACCGACCACAACCAAATTTTTTACTAAACCGACCGACTGATGTCGGTTTGGGTGGGTTTGGTTGGTTTGGTCTGCTCGCCCCTAAGGGTGTGGAGTGGGAGCTTGGTGAGGTTCCATATTTTTCTTTGGGCTTTGGTCTCGAAGACTTTTTGTAATTATCCTCTAGGTAGCATCTCACTTAGTTGGAAATCCTTTCTATAGAGGGGTTTTGTGGGCTTTTTTTTTGCCCTTGTTTTCTTTCATTTTTTCTCCATGAAAGGAGTGGAATATTTAAATTATAAAAATAAAAATAATGGAAAAAAAAACTTCAAAAGCCCTACCTGAATGTTAGGTCAATTCTTGCTGTTTTCAAATATTTATGGTTTTCCTAGTATTACATGTTCTACATAACGACCTTACTTGAGCAGGATTTGTTCTATAGTTTGTAAGTGTCCTTGAGTTCTAAAAAATATTACGTGTCCTACATATGATTTATTTGGATGCCCATTGTAAAACTTATGTTTTAAAGGTTTTAGGACAGAGTTGAGCATCTTAAGCTTTATCGGAAGATCATGCATGCTGAAGAAGTCTAATTTAAAAAATAAGTGGCTTCCTTCTTAGCTCAGAGTACTAATATGTCCAAGTTTTGTAGTCGAATGATATGATTACTACGATCTTCTAATTGCTTGAAGGTAAAATTTCTCTGAATGTCATCGATGCATTATGTGTTATTGGAAACCAAGTATTCGTTATTTGGTACCCTTCTGACATGTGATTTTGTTTTATACTGGAATTGCAATATTTTCTAACTTTATAGCTTTATTTTTGTTGGCCTTTTCCTCTATATTGCTTTCCAGTCCGGCAGCTTGCTTCTCAACACTTCCTGGTATGTTCCAATTCTTGGAGCTAAAGTTCTTGTGCACACACCATAATCACGGAGTAAACTTGGGAAATTGAGCAACCGATCTGATGTTTAAGCTTAAGTCCTCACACACCTCAAAATGGGAAAATAAAGTAGTATCACTTATTCTTAATTTTTCTCCCTGATGTTTATCCACATAATTTAGTCTGGTGTTTATGATTTTTTAATGTTTACTCGTTTAATAGCCATAGTTTCACTTTGCAGGGTTTTCCAAGTTCCTCACATGGCTTTCTTCATAAGTCCGGTTAATGTATAGGGTGTGCTCCGGATTTGTGACACACTTTTTGATTTGAAGTTGAATTTAGGTATTAGTGTAGCTAGTGAAAATGGAAGACAAGATCGCAAAGGTATTGGGTAGCCAGAGAGTTGCACTCGCCTTAAAAAGGAAGCGAGCAGCACAGTTTGATGCATATTCAACAGAACCAGTCTGCATGGCGCACCAGTGGCCTACCATGACTTCATTAAATAGGGTGGAAAAGAGACGGAAGCTAGGCGGATCTAGTGGAATATTTGCAGAATCTGAAACTCGTTTTAGACCCTTGTACAGAAGTTACTCAAATTTTATGAAAAGTGGGATACCGAAACACATAATGTTTTATGAAAATGGTGAGTGGATTAAATTTCCCCGTGATCTTCTTGATTTGGTCGTGGAAGATCTGCAGGTAAAGAAAGCATCTGTGGAAATTAAGTTTAATGGACAGCACTGTGTGCTAGACTTTTTGCATATGTTTTTCTTGGACTTAAATACAGGGTTGCAACAACCTCTTGCATGGATTGATGCAGCAGGGAGATGCTTCTTTCCTGAGATTTATGGTGCAGATACAAGTGAATGCTGCCATTCTAATAATTTTGGAAATAAAGAACCACAGGTTGAAGAAGATCATGGGTCTGACGTAATCAAGTTGCAGTTGGAAATTGAAATAAGTGGAGTTGACCAATCAAGTTTGAAGGTGTGTAGTGGGGAATCAAATGATTACATCAAGCCGTCCCAAACTGATGAAGAACTTGCTTATGACCGTGATATTGAAGAAGTTGAGGATAGTTGTGGTAGAATACCTGTTGGAAAAGCGTATGACGTTGTCCCTGAACATAAAGAGTTGGATGAGAACCTCATCTCTGGGATGCAAGAACTTAAAGAGCTGGATGTGAACCTCATTTCTGGGATTCGATTGTTGAACGGAAGATTGGATAAAAGAACCGTGGAAAAGATATTTCGTGATGGAATGATGAGCTCTGATGGTAGTATAGAGATACTTAATATAAAACACTGCAATGACACTTCAATGCAATCTCAATTAGAGCTTTTCAATAAGCAAATTGAAATGACCAAATTGTACAGAGGGGATGCGAATGTTCGTTTTGCTTGGCTTGCTATTTCTGAAACAGAATTATCTAGCTTGATGATGTATGGAATTGGGCATTGTGCAGTTTCCTCAATCAAATCCATGTATGGCACTGGTGTTCACCTCACAGCTGTCAATTGCTCGAATGTCAGGTGGTTGGCCTTTTTCAGAACAATGATTAACTTTTATATGATTTTGAACTGGTATATAGAATATGTTGGTTACACTTGAATTGTATTTTCAACTGACAGTTTGCATAACTAAACTAACTACCCGGCCACTAATGAAAAAGAGAAAAAAAAAAACAACTATTGACTGCTAACTGTCAAGTGTTACAATACTACATCTGGTTCAATTTGCCCCTCAACTTTAAGGAAGCCTGTCCTTGGAGTTTGGATGATGAAATATGGTTTCATTTGGTGCAAAGTATTAAGGTCAAACTGAAGCACGCCAGAAGTTAGATAGGTGCAGGCTGTTGGAAGATTTTTACATAATTATTAGCCCAATTCTTTTTATTATTTAGCAAGGACTAAGTAGCTCTTTCTCTCTCCAGCTTATTATAGGTTCGGACAGGAAGTTGATTCAGCAAGTCCCATTCCTCAAAATCTTATGCTCTTCTCTCCTATTTATTTGTGCCATGGGAGGAGTTTACATTTATTGTTAAAATAATTCTTTATTTGCCATTAAAAATGATTTGACTTCTTAATGTTTCTTAGCTCATATCTGCAACTACCTTTTTCATTTGCCCTAAGTTTTACACTTTTATATGCAACATTTGCCATTCTTTTACCGTGGCTCCAGAAATGATAGGAGAGATGGATGGAAAAGCCTGCGACAGAAGTTTGGTCCATTATTAAGCATCACACCTCTCTTTAGCCTTTGTGTGTAAAGATTTATTGTAATTATTCGTTAGGTATTATCTTGTTTGACTGGAGTCTTTTTTAGTTTAGTTACGCTCTCATGGGGGTTTCCCTTTTCTTTTTCTTTTTTTCTTTTTAAAATTTTTAATTTTAATAATACCTTAAAAACAGGTAAAATGCATCTTGTTAAATGTTAAATGTTTGGACTTGGGAAGTTTGTTTTGATAGATTTTCAATCTAGTTGCCTAGGTAAGACAATCTCGAGAGGGAGTTACTTGTTGACCTATGCTTCATGTTGTAACGAGTAAAGTTGACTTGAGCTATGCTAATGCCTCGTTGTTGAGGCTTCTCAGCCCTCAACTCCAGCTTGAGTTAGTAACCCCTACTTTGCCCGTCTGTTTGTGGATGGAGGGCGGTTGCAAATTTCTTCCATAAAATTTTCATAGTGTTGGTAAATTTAGAGGTCATTGGTAATTGGTTTTGAAATACCATGCATTCTCTTATATCTTTAAGGAAAAAAAATTGGCAATGCCTAGGGTTAGGGCGTATTTTTTGTTCTGCCACCCAGAAATGTAATGGAATATTCCACAAAATCGATTCACAGCTACAAAGACAGAGTCATCCTCTTTATATGTGTTTGGAAATCCATATATAAAATCTGTGGAGAGATCTTTCTATATATATTTTTATGTTTGCAGCAATGAATGTAATCCTTTACATAAGGTTGCTGGGAGGAAGTTGATATGTTGGGCATCTTTTTAGATAATTTTTATGGTGGAATTGGCATACAAGGCATTGGAGACAAAAAAGGGCCCTTCTCGCTAAGTGGATATGGCAATATTACCATGAAGAAGGTGCGATCAATGACTCTTCATGGCCCAATACTTCCTTCCCTGAACATATTAAAGGCCCATGGAGATCCATCTTGACTCACTTAAATCTTATCAAAGAGAGAATTTCTATCAAAGTTGGGAATGGCAGCAACACCTCTTTTTGGCATGATCACCGGATTCCACAGCCCCTTTATCAAACCTTTATCCTCGGCTCTACACATTGGCCTCCCATAAGCTGTCCACCGCGAGCAATTGAATTGTTGGGTTGCACATCATGGTTGGGCCACCACCTGCAGAAGGAATTTCAAAGAAGATGAATTTGATGATTGGATGGCTCTCATGAACCTTCTTGATGGAGTTCGGTTAGCCTCCACAAGAGATAAATGGGTATGGAATCTTGAGAAAAATGGTCTTTTCTCCACAAAATGTTTGGCCAATTGATTTGGAATTGAGGGGGCTGCACCAAAGCCGTCCTTTTTTGACAATATATGGACGGATTTCTACCCCAAGAAAGTTAAAATTTTTGTGGAGATTAGCCACAACACCATCAATACGAATGAAAAAATTCAGAGACGTCTCCCACACGTGGCCCTTTCTCCAGAATGCTGTCATCTCTGTCATGCCGATTATGAGACCCAAGTCATCTTTTCATCGATTGCTCATTTGCTAAGAACTTTTGGAAGGAGATCACCATCTCCTTGGGATGGTCTACTCCTTATCCTAATGATATCTTGAGCCTTTTCATGTACACTCACTGGAAATCCTTTTAGCTCACACAAGAAGATTATGTGGTCACACTTGATTCGTGCTTTCTTATGGTTAATCTGGAAGGAGAGAAACAATCGCCTCTTCAATAAAAAGTGAAGCTCTGTGACACTTTTTTTTTTTTTTATCAATACCATCTATGACTTGGTGCAAATGTACATCTTTTTTCAATTCATATGATCTTACATCTCTCTTGACCAATTGGATAAGTCTTCTATAACTCCTTTGGTTCGGGCTTCTTGCTCGTCTTTTGTAAATTTCATACATCAATGAAATTTGTTTCTTAAAAAAAAAAAAAAGTTGACACTGTCTATGTTGTATTTGTGTCTCGTGTCTATGTTTGTGCTTTGTTGCCAACCATTAGTTTTCATCTTTCCAAAACTGAGGGTAGATGGCTGAACATCTCATACATTTTCATGTCTGTTCTTTGTCATATTTGCCATTGGGTCTGTTTATAATTTCTACAACTCAGTAATTTTTTCTTCTTATTATACATCCACTTCCCATACCTGTTTTGGTTATTGTTCATGTGGCCATGACAACTTCATATAATGTATATATGTTGACTGGTATTTCTCATGATTCATTTTGTCCTTTATGTCCTTGTTAAACATACACCATGTTGCTTTCAGAAGATTTGATCTTTTGTTTATTTACAGTGCAAATATTGATGACAATGGAGTGCAGCATCTGGTATTTTGCCGTGTAATATTGGGAAACTTGGAACTTCTTCACCCTGGAAGCAGACAATTCCATCCAAGTAGCAAGGACTTTGACAGTGGAGTGGACAACCTTACAAAACCAACATATTACGTTGTATGGAGAATGAATATGAACACCCACATCTATCCAGAGTCCGTTGTAAGCTTTAAGGCTGCTCCCAATCCCAAAGGTGATAATCATCTCTGGCTGCACTGTTTGTTTGGAGGAGCCTGTGACTTAATGCTTGTTTTTCCTTGATTAGTTTTACAAATTCTGCCCTAGGACAGCCATATTTTGCTTAGAGATGTTACTGCACTGATGGTTGGAAATGAAATTGTTGATTACAGTTTTCAGATTTGATGTAGTAGGAATCTAATGAATACATACATGTAATGTTATTCTGAGCACTAATTGATGCGATCCATTTGTGCAGTTGAAAACCGTACTAATGATGTTTCAGGGATCATTGCATCTCGTCAAGGGTCTCCTGACCAAATACAGTTGGAGCCTTCTGTAGTCAATGCGGTAAGCCTCCACATTTATCAATTGATTTATGTCTATTGCATTGCAGCCATTCATTATGATGGTTCAATATATGGGTTGTGGTTCATTGTTTCTTGTTTTCATGAAGATGGCATCTGGTGAACTGTGCCAAAAAATGAAACCTTTATTTATATTTGATCTTTTAGCACGTGGCTTTACTTGCAAATACTGAACTATCTTTTAGGTTAGCGATGGTCAACCTTCAGATGTTTGGAGATCTCATGAAAGAGCAGTTAGTGTGGGTTCCAACTCTATGAAAACGCCCAAGTCTCCATGGATGCCTTTCTCCATGTTGTTTGCTGCTATCTCTAATAAAGTTCCTTCTAAAGACATGGAGCATATTTATATGCAATATGAACAATTCAGGGTAATTTTGAATTGAAATTTAATGTCATACTTCTTTTCATGTCTTTTCATGTTACTTATATGGATATTGTTTTCTAGGCCAAGAAGATGAACCGTGATGATTTTGTAAGACAGCTGAGACTGACAGTTGGAGATTCTTTGCTGTGGACTACAATATCAAGTCTTTGCAAGGTCATCTTCTGCCTAGTGCCTCCTCCATTTTTTTCTTATAAAAAAATTCTTCTGATTTTCAATTTCCCTATATTTGTTCTACTTTTGATACTTTGACCCCTGTATACATGTAAATCGACTGTCTCTTTTTGGAAACGAAGCAACCATTTCATTGTTAGATGAAAAGAAAAATCAAGGATAAAAACACCCAAGTAATGCAGATAACGAGCAAGCAAACCAAAAAGGGAAGGCCTCCCAATAAGTACAGAAGGTACGATAGAATAATAAGGAAGAAAACGCCCTAGGGAGAAACAAGCTAACAAAAATAACGAGAAAGCAAGACCCAAGCCAAAGAGACACTGAATCTTAATCAGTCCAATGTTTCTCTTCTTGACCTCTATACATGAAAATTCAATGTCTCTCTTTCATGTCAATGAATTGAATTACTCCCATTTCCACAGGTAAAACATAAATCAAAATGTATTGGTAATTTGTTAACTTAGGCCCACCTATAAGTTTCTTTGTTTAATAATATATTTTTTACCTATGTTTTTTTAAAACTAAGCCAAATTTTAAAAATGGAAAGGAAAAATAGTTTTTGTTTTCAGAATTTTGAATAAGAGTTAATGTGTATCTTTAAGAAATGTGGAAACTATAAGTAAGCATAAATTTTAGAAACAGAAACTAAAAATAAAATCTTTATCTTTATCAAGCGAGGCAAAAGTTTCTTTCTTTTAATTTTTTGTTTTTAAAGGCCTATTGCAAATAGGAATGAAAAACAAATCTATTTCAGCTAATAAGAGAACATTTGTGAAGACTTTATGACAACAATTTTGGTTTTAGTTTTCTATTTTAAAATTTTTTCTTGCGTCTCAGAGTTTCTGTCTATTTTAAAAAATTATGCTTGCTTCTCAGAATTTGCTTTGTTTTGTTTTTTCTTTTCTTCTCTCCATCGATAGTTTTGTTTTTCTTTCTCCTTTCATTTTCACTCCCTAGGGAGTTTATATCCTTGCACTACTGTTCTTATTCATCAATCAAATAGAAGTATGTAAGCATTTCTAGGGGGCTTGTTGAGCATTTGTGACAATTGTTGGTGCGTCGGTGAAGATTTCAATTCAATGTCATCAGTCAAGATGTGAGTTTCCGGAAGATCTTCAGGGATCCGTCAAGAGGACAAAGCAACCCAACTGCAATTTCCTTGGTCAAAAACGGCCGCAGGGGGTGCAACAACAGGCACCAGTTTGACTTGGGGGTGCTGATTTAGTGGCAGTGCGCGGCAAAGTTGCTTTGTTACCTATTATATTAGGATCCACAGATTTTCTGGTGGGGTGCCTCGAATCTGACATGCGGCTTGCTTGGTAGGAGTAACATGAAGCTCAGATAGTCAATACTCCCATCTCAAATAAAAGGGGAATTGGTTTATGGTCGATCCCTCCAGAAACTTTTTTCAAATACCAAAGTGCAGTCTCTTCCTACGAATTAGTAAATTAGGAGAAAATGCTTCTCCCATTCTTTACCTAGTTGCTCAATTTTCTCGTCCCTGATGAGTGGTTTAGTAAGCTATTTGGGATTCTGTGGACATTTTTGGTTCAATTAGGAACTTTGCATGGCATTAGACTTAGAACATGAACTTGCAAATGATTTGGTGGGGGTATTCAACTTCCTGGTTGAAAAACTCTCTAATTGTTCGATTTGTCTTGGTGATAGTTGAGTAGATTCCATTAGTCTATAGAGCCCCAAACGTTCATCTTCTTGGAAAAAGGAAAATACCTTCTTCAGGCGCGGCCTAAGTTGATTCTACTGGTCCTTTCTGTGCCCTGTTTAGGAGTCCTTTGGTCAGTTTGTTTCGAACTGGTGAGGATCGTGATTAACCTTGACTCTTTGTTGGAAAAAAAAATCAATTTATACTCCTAAACTTTTGGAGTTGTATCAATTACAACTCCAAACTAATAATTATCAATCTAAACAAAACTTTTACAAATGATCCAGTTTGATAAACCCTATGTTAGTGGTTTATAACTATTTTTACTTGATTTTATTTAAAATCAACTCCAAATCACGTAAATAAAATCACATTCACTCACTATCCAATTGTTTTCAGCCTCTCTCCTATATTTTGTTAATTTCAACATTTAAAGTATACCTTATACGTGTTAGAATTATAAATTAACAACTTTAAAAGAAATCTTATAAGAGGGTCTAAATTTGATTCATTTGTGGAACTTAAAAGGTTTTACTTATACTATTATTAATTTGAGGGCTTAATTGATACAAACACCAAGTTTAGGATATATATCGCCCCAGCTGAACTATATTGGAATCAGGACATGAAATATTGAAATTAATAAAAGAAAATGTTCTTTTATCTATAACGGCTTGATTTACCTGATTTTGTGTTCTCCCTTGCTGCAGTTTTCGGAAGATGACGTTTTGTTTATTGTAGAGTCTAACATGCGTCGCCTATGAGTTCAGCTATGCTTGTAGAATGAGATCAGACTATGGGTCTTGCATTTTTTTCTATGATACCTTTTTTCTACTGAATCGCAAATTGATGCTTTAAACTTTTGACAATTGTGTTTATTTGGTCTCCAAAGTTTATGAAATTTCATTCACATTCTTGGACTTCTAATTTTGATTCCATTTAGTTCTTGTCATTAGCAACATTATTTAAGTATTGACGTGACACATTATTCGTATGAAGTGAGTGGATAAAATACATTTAAAGTTGAGTTTTTGGTTGCACGCTCTTATATTGTCCAACTAACTAGCTTTTTTGTGCGATTTGCTCCCCATCGTGTCAGTTCATTAGTTTGATTAATGTGTGTCGACATTGAGTAATGGGATAAAATACATTTGAAGTTGGAGTTTTTGGTCGCATGCTCTTAGATTGCTCAACTAACTAGCTTTTTTGTTTGTTTCTATTGGGTTTGACTCTCTTGTTTTCTGGCTCTTTGCTTGATCCTCTTGTAATTTGAGTTTTAATTTCTTTTCATTTTATCAAAGCCTTTTTTTTCTTTTTTTTTGCTTTCAAACAAAAAAAACAAAGCTTCCATGATGTTATTGAAATGTTTTGAGGATGGATACAATCATCAAAGTTCGATTGATTCGATTTGTAATTTAACAAAAAAAATCCATTTCATTTGGCTTTTTTCTTTGAAAATTTGAATATATTGTGCAAGAAATCTGCTTTTGATAGTAAACCCAATGTTCTTTCTTCTTTTTTTTTTTTTTTTTCCTATTGAGAGTTCCTCTTTCTCGCAGGTGCCAATGAAATCATCCAGCCCATAACGCAAGGATCTGAACCAATCAAGATACAAAGTGCTTTTAATGGTAATGGTTACGTGATGCTTTTGGTTAGAATGCGTCGACATAAAATTGTGAATATGCTCTTCATTTCTCTGGAACATGTTTTTTTTTCTGTTTTGGACTATTGCAATGTTACTTTTTTTTGGGTTATTTTCTTCAAATATTATATTTCTAAGTTTTTATTTTTACGCACAAGGATTTTCGATTATTGAATGTTTAGTGTATTGATCAGGTTATCAGGAAGTTGTTGGCAATGAGATGAGCAAAATGTACTTATCATCTTTGAAAATAGAAGTTATTGAAGTTCA

mRNA sequence

ATGCTGCTTTTTGCTGGTTTGAAAGATTTTCAGTCATGGGAATCAATTTCTAGAAAGAAGGATAAAGCTAATTGGGTCAAGGATTTCAGACCTATTAGTCTTATCACTAGTGTTTATAAGATTCTGGCCAAGGTCCTTGCAAATCACCTTAGGAAAGTGCTTCCTTCCACCATTTCAGACTCACAAGGTGCTTTTATAGTAGGGAGAAAGATCCTTGACCAAGCCCTCCTTACTAATGAAGCTGTTGAGGATTATAGAGCCAAAAGGAAGGAAGGAGTGGTTTTTAAAATTGACTTCGAAAAGGCACATGACCATGTTGATTGGGACTTTCTAGATAAGGTGATGGATGAGAAAGGTTCTGGGAATGTGAGTTACTCACTCCTTGTGAATGGAACTCCTAAGGGATCAAGCAAGGCTTCTAGGGTTGTGGACATTTTGAGTAGACTCATCCTGAAGGGGGTGGAAGGTAACATTATCAAACCCTTTAAGGTTGGTTTGAAGGACGTGGCATGGACTGCTTTAGGAACCTTAATCACTGTTTCGGGTTTCTTTGAGGCAATCCCTGGGCTTAAAATCAACAGGAACAAGTGTCAGATTCTGGGATTCAATTGTGATCAGGAGAAACTAAGGAGTTGTGATGGTGTGATTGGTTGTGAAGTGGGGTCCTTTCCTTCTTCTTACCTTGGCCTCTCCGTTGGGGGAAATTTGAGGGCTATCTCTTTCTTGGATTCTCTGCTTGAAAAGATTAGGAAGAGGTTAGCTTCGTGGAAGAAAAGTTTCTTTTCCAAAGCTGGAAGACTTACCTTAGCCAAGTCGGGGTGGATGGAGGGAAAGGCTCTCTTTTGGTCGGTCGGGAGGTTATTGGGAGATCTGTTAACTAGGGGGGTTAAAGCTCAGAATCTAAGATTACGCAACAAAGCGTTGTTGGCTAAATGGCTTTGGTGGTTTTCCTCTGAACTTGAATCTTTGTGGCATAGGATTATTTTACCCATCCTTTTTGAACGATTGTCCAAGGGGGTTAAAGGTACATTTTGGAATTCATGGAAACATATTTCTCTTGAGCTCCCTTCTCTCTTGGAAGATCAGTGGGTAGGAGTTAGACCCCTCTGCTCTGCATTTCCTCATTCATATCATCTTTCTTCTTATAAAAGTCGTCCTGTTTCTAGTATGTTGGTTTGGTCTAGGAGCTCGATGTCTTTTTCCTTTGGTTTTCATTGTTCTTTGTCCGATAGGGAAGCAAGGAAGGTTGCCTCTTTGTTGTCCTTACTTGATGAGGTCAAGTTTAGGCTGGGGAGAAGGGATGTCTTTGATGTGCTTTGGAGGATTAAGATCCTTAAGAAAGTTAAATTCTTTACCCGACAAGTTTTACTTGGCCGGGTGAACACTATGGATAGGCTTCTAAGGAAGAAGTCTTCGCTTATGGGGCCTTTTTGTTGTATTCTTTGTCAGAAGGCGGAGGAAGACCTAGTTTCCGACGCCCGCCACCCACACGTTGATTTAAATTGGTCGGTTTCCTTTGGTCTCGGGATTGTTGAGAATGCGGATCAGCTGATCATGTGGTTGGTCTTGTCGGTTCCATATTTGAACCGGCGAACTAGAAAAGAATCCGGCAGCTTGCTTCTCAACACTTCCTGGTATGTTCCAATTCTTGGAGCTAAAGTTCTTGTGCACACACCATAATCACGGAGTAAACTTGGGAAATTGAGCAACCGATCTGATGTTTAAGCTTAAGTCCTCACACACCTCAAAATGGGAAAATAAAGGTTTTCCAAGTTCCTCACATGGCTTTCTTCATAAGTCCGGTTAATGTATAGGGTGTGCTCCGGATTTGTGACACACTTTTTGATTTGAAGTTGAATTTAGGTATTAGTGTAGCTAGTGAAAATGGAAGACAAGATCGCAAAGGTATTGGGTAGCCAGAGAGTTGCACTCGCCTTAAAAAGGAAGCGAGCAGCACAGTTTGATGCATATTCAACAGAACCAGTCTGCATGGCGCACCAGTGGCCTACCATGACTTCATTAAATAGGGTGGAAAAGAGACGGAAGCTAGGCGGATCTAGTGGAATATTTGCAGAATCTGAAACTCGTTTTAGACCCTTGTACAGAAGTTACTCAAATTTTATGAAAAGTGGGATACCGAAACACATAATGTTTTATGAAAATGGTGAGTGGATTAAATTTCCCCGTGATCTTCTTGATTTGGTCGTGGAAGATCTGCAGGTAAAGAAAGCATCTGTGGAAATTAAGTTTAATGGACAGCACTGTGTGCTAGACTTTTTGCATATGTTTTTCTTGGACTTAAATACAGGGTTGCAACAACCTCTTGCATGGATTGATGCAGCAGGGAGATGCTTCTTTCCTGAGATTTATGGTGCAGATACAAGTGAATGCTGCCATTCTAATAATTTTGGAAATAAAGAACCACAGGTTGAAGAAGATCATGGGTCTGACGTAATCAAGTTGCAGTTGGAAATTGAAATAAGTGGAGTTGACCAATCAAGTTTGAAGGTGTGTAGTGGGGAATCAAATGATTACATCAAGCCGTCCCAAACTGATGAAGAACTTGCTTATGACCGTGATATTGAAGAAGTTGAGGATAGTTGTGGTAGAATACCTGTTGGAAAAGCGTATGACGTTGTCCCTGAACATAAAGAGTTGGATGAGAACCTCATCTCTGGGATGCAAGAACTTAAAGAGCTGGATGTGAACCTCATTTCTGGGATTCGATTGTTGAACGGAAGATTGGATAAAAGAACCGTGGAAAAGATATTTCGTGATGGAATGATGAGCTCTGATGGTAGTATAGAGATACTTAATATAAAACACTGCAATGACACTTCAATGCAATCTCAATTAGAGCTTTTCAATAAGCAAATTGAAATGACCAAATTGTACAGAGGGGATGCGAATGTTCGTTTTGCTTGGCTTGCTATTTCTGAAACAGAATTATCTAGCTTGATGATGTATGGAATTGGGCATTGTGCAGTTTCCTCAATCAAATCCATGTATGGCACTGGTGTTCACCTCACAGCTGTCAATTGCTCGAATGTCAGTGCAAATATTGATGACAATGGAGTGCAGCATCTGGTATTTTGCCGTGTAATATTGGGAAACTTGGAACTTCTTCACCCTGGAAGCAGACAATTCCATCCAAGTAGCAAGGACTTTGACAGTGGAGTGGACAACCTTACAAAACCAACATATTACGTTGTATGGAGAATGAATATGAACACCCACATCTATCCAGAGTCCGTTGTAAGCTTTAAGGCTGCTCCCAATCCCAAAGTTGAAAACCGTACTAATGATGTTTCAGGGATCATTGCATCTCGTCAAGGGTCTCCTGACCAAATACAGTTGGAGCCTTCTGTAGTCAATGCGGTTAGCGATGGTCAACCTTCAGATGTTTGGAGATCTCATGAAAGAGCAGTTAGTGTGGGTTCCAACTCTATGAAAACGCCCAAGTCTCCATGGATGCCTTTCTCCATGTTGTTTGCTGCTATCTCTAATAAAGTTCCTTCTAAAGACATGGAGCATATTTATATGCAATATGAACAATTCAGGGCCAAGAAGATGAACCGTGATGATTTTGTAAGACAGCTGAGACTGACAGTTGGAGATTCTTTGCTGTGGACTACAATATCAAGTCTTTGCAAGGTGCCAATGAAATCATCCAGCCCATAACGCAAGGATCTGAACCAATCAAGATACAAAGTGCTTTTAATGGTAATGGTTACGTGATGCTTTTGGTTAGAATGCGTCGACATAAAATTGTGAATATGCTCTTCATTTCTCTGGAACATGTTTTTTTTTCTGTTTTGGACTATTGCAATGTTACTTTTTTTTGGGTTATTTTCTTCAAATATTATATTTCTAAGTTTTTATTTTTACGCACAAGGATTTTCGATTATTGAATGTTTAGTGTATTGATCAGGTTATCAGGAAGTTGTTGGCAATGAGATGAGCAAAATGTACTTATCATCTTTGAAAATAGAAGTTATTGAAGTTCA

Coding sequence (CDS)

ATGCTGCTTTTTGCTGGTTTGAAAGATTTTCAGTCATGGGAATCAATTTCTAGAAAGAAGGATAAAGCTAATTGGGTCAAGGATTTCAGACCTATTAGTCTTATCACTAGTGTTTATAAGATTCTGGCCAAGGTCCTTGCAAATCACCTTAGGAAAGTGCTTCCTTCCACCATTTCAGACTCACAAGGTGCTTTTATAGTAGGGAGAAAGATCCTTGACCAAGCCCTCCTTACTAATGAAGCTGTTGAGGATTATAGAGCCAAAAGGAAGGAAGGAGTGGTTTTTAAAATTGACTTCGAAAAGGCACATGACCATGTTGATTGGGACTTTCTAGATAAGGTGATGGATGAGAAAGGTTCTGGGAATGTGAGTTACTCACTCCTTGTGAATGGAACTCCTAAGGGATCAAGCAAGGCTTCTAGGGTTGTGGACATTTTGAGTAGACTCATCCTGAAGGGGGTGGAAGGTAACATTATCAAACCCTTTAAGGTTGGTTTGAAGGACGTGGCATGGACTGCTTTAGGAACCTTAATCACTGTTTCGGGTTTCTTTGAGGCAATCCCTGGGCTTAAAATCAACAGGAACAAGTGTCAGATTCTGGGATTCAATTGTGATCAGGAGAAACTAAGGAGTTGTGATGGTGTGATTGGTTGTGAAGTGGGGTCCTTTCCTTCTTCTTACCTTGGCCTCTCCGTTGGGGGAAATTTGAGGGCTATCTCTTTCTTGGATTCTCTGCTTGAAAAGATTAGGAAGAGGTTAGCTTCGTGGAAGAAAAGTTTCTTTTCCAAAGCTGGAAGACTTACCTTAGCCAAGTCGGGGTGGATGGAGGGAAAGGCTCTCTTTTGGTCGGTCGGGAGGTTATTGGGAGATCTGTTAACTAGGGGGGTTAAAGCTCAGAATCTAAGATTACGCAACAAAGCGTTGTTGGCTAAATGGCTTTGGTGGTTTTCCTCTGAACTTGAATCTTTGTGGCATAGGATTATTTTACCCATCCTTTTTGAACGATTGTCCAAGGGGGTTAAAGGTACATTTTGGAATTCATGGAAACATATTTCTCTTGAGCTCCCTTCTCTCTTGGAAGATCAGTGGGTAGGAGTTAGACCCCTCTGCTCTGCATTTCCTCATTCATATCATCTTTCTTCTTATAAAAGTCGTCCTGTTTCTAGTATGTTGGTTTGGTCTAGGAGCTCGATGTCTTTTTCCTTTGGTTTTCATTGTTCTTTGTCCGATAGGGAAGCAAGGAAGGTTGCCTCTTTGTTGTCCTTACTTGATGAGGTCAAGTTTAGGCTGGGGAGAAGGGATGTCTTTGATGTGCTTTGGAGGATTAAGATCCTTAAGAAAGTTAAATTCTTTACCCGACAAGTTTTACTTGGCCGGGTGAACACTATGGATAGGCTTCTAAGGAAGAAGTCTTCGCTTATGGGGCCTTTTTGTTGTATTCTTTGTCAGAAGGCGGAGGAAGACCTAGTTTCCGACGCCCGCCACCCACACGTTGATTTAAATTGGTCGGTTTCCTTTGGTCTCGGGATTGTTGAGAATGCGGATCAGCTGATCATGTGGTTGGTCTTGTCGGTTCCATATTTGAACCGGCGAACTAGAAAAGAATCCGGCAGCTTGCTTCTCAACACTTCCTGGTATGTTCCAATTCTTGGAGCTAAAGTTCTTGTGCACACACCATAA

Protein sequence

MLLFAGLKDFQSWESISRKKDKANWVKDFRPISLITSVYKILAKVLANHLRKVLPSTISDSQGAFIVGRKILDQALLTNEAVEDYRAKRKEGVVFKIDFEKAHDHVDWDFLDKVMDEKGSGNVSYSLLVNGTPKGSSKASRVVDILSRLILKGVEGNIIKPFKVGLKDVAWTALGTLITVSGFFEAIPGLKINRNKCQILGFNCDQEKLRSCDGVIGCEVGSFPSSYLGLSVGGNLRAISFLDSLLEKIRKRLASWKKSFFSKAGRLTLAKSGWMEGKALFWSVGRLLGDLLTRGVKAQNLRLRNKALLAKWLWWFSSELESLWHRIILPILFERLSKGVKGTFWNSWKHISLELPSLLEDQWVGVRPLCSAFPHSYHLSSYKSRPVSSMLVWSRSSMSFSFGFHCSLSDREARKVASLLSLLDEVKFRLGRRDVFDVLWRIKILKKVKFFTRQVLLGRVNTMDRLLRKKSSLMGPFCCILCQKAEEDLVSDARHPHVDLNWSVSFGLGIVENADQLIMWLVLSVPYLNRRTRKESGSLLLNTSWYVPILGAKVLVHTP

Homology

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BLAST of ClCG10G001300 vs. Swiss-Prot
Match: LORF2_HUMAN (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.8e-08
Identity = 65/287 (22.65%), Postives = 121/287 (42.16%), Query Frame = 1


Query: 27  KDFRPISLITSVYKILAKVLANHLRKVLPSTISDSQGAFIVGRKILDQALLTNEAVEDY- 86
           ++FRPISL+    KIL K+LAN +++ +   I   Q  FI G +       +   ++   
Sbjct: 528 ENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHIN 587

Query: 87  RAKRKEGVVFKIDFEKAHDHVDWDFLDKVMDEKGSGNV------------SYSLLVNG-- 146
           RAK K  V+  ID EKA D +   F+ K +++ G   +            + ++++NG  
Sbjct: 588 RAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQK 647

Query: 147 -----TPKGSSKASRVVDILSRLILKGVEGNI-----IKPFKVGLKDVAWTALG------ 206
                   G+ +   +  +L  ++L+ +   I     IK  ++G ++V  +         
Sbjct: 648 LEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVY 707

Query: 207 ---------TLITVSGFFEAIPGLKINRNKCQILGFNCDQEKLRSCDGVIGCEVGSFPSS 266
                     L+ +   F  + G KIN  K Q   +N +++      G +   + S    
Sbjct: 708 LENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYNNNRQTESQIMGELPFTIASKRIK 767

Query: 267 YLGLSVGGNLRAI--SFLDSLLEKIRKRLASWKKSFFSKAGRLTLAK 272
           YLG+ +  +++ +       LL++I++    WK    S  GR+ + K
Sbjct: 768 YLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVK 814

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BLAST of ClCG10G001300 vs. Swiss-Prot
Match: LORF2_MOUSE (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 2.6e-07
Identity = 63/294 (21.43%), Postives = 121/294 (41.16%), Query Frame = 1


Query: 26  VKDFRPISLITSVYKILAKVLANHLRKVLPSTISDSQGAFIVG-------RKILDQALLT 85
           +++FRPISL+    KIL K+LAN +++ + + I   Q  FI G       RK ++     
Sbjct: 534 IENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFNIRKSINVIHYI 593

Query: 86  NEAVEDYRAKRKEGVVFKIDFEKAHDHVDWDFLDKVMDEKGSGNVSYSL----------- 145
           N      + K K  ++  +D EKA D +   F+ KV++  G      ++           
Sbjct: 594 N------KLKDKNHMIISLDAEKAFDKIQHPFMIKVLERSGIQGPYLNMIKAIYSKPVAN 653

Query: 146 ------------LVNGTPKGSSKASRVVDILSRLILKGV-EGNIIKPFKVGLKDVAWTAL 205
                       L +GT +G   +  + +I+  ++ + + +   IK  ++G ++V  + L
Sbjct: 654 IKVNGEKLEAIPLKSGTRQGCPLSPYLFNIVLEVLARAIRQQKEIKGIQIGKEEVKISLL 713

Query: 206 G---------------TLITVSGFFEAIPGLKINRNKCQILGFNCDQEKLRSCDGVIGCE 265
                            L+ +   F  + G KIN NK     +  +++  +         
Sbjct: 714 ADDMIVYISDPKNSTRELLNLINSFGEVVGYKINSNKSMAFLYTKNKQAEKEIRETTPFS 773

Query: 266 VGSFPSSYLGLSVGGNLRAI--SFLDSLLEKIRKRLASWKKSFFSKAGRLTLAK 272
           + +    YLG+++   ++ +      SL ++I++ L  WK    S  GR+ + K
Sbjct: 774 IVTNNIKYLGVTLTKEVKDLYDKNFKSLKKEIKEDLRRWKDLPCSWIGRINIVK 821

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BLAST of ClCG10G001300 vs. Swiss-Prot
Match: YTX2_XENLA (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 5.9e-07
Identity = 32/97 (32.99%), Postives = 47/97 (48.45%), Query Frame = 1


Query: 15  SISRKKDKANWVKDFRPISLITSVYKILAKVLANHLRKVLPSTISDSQGAFIVGRKILDQ 74
           S+  KK     +K++RP+SL+++ YKI+AK ++  L+ VL   I   Q   + GR I D 
Sbjct: 511 SLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFDN 570

Query: 75  ALLTNEAVEDYRAKRKEGVVFKIDFEKAHDHVDWDFL 112
             L  + +   R          +D EKA D VD  +L
Sbjct: 571 VFLIRDLLHFARRTGLSLAFLSLDQEKAFDRVDHQYL 607

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BLAST of ClCG10G001300 vs. TrEMBL
Match: A5BI72_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000131 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.1e-67
Identity = 207/621 (33.33%), Postives = 290/621 (46.70%), Query Frame = 1


Query: 19  KKDKANWVKDFRPISLITSVYKILAKVLANHLRKVLPSTISDSQGAFIVGRKILDQALLT 78
           KK  +  + DFRPISLITS+YKI+AKVLA  +R+VL  TI  +QGAF+ GR+ILD  L+ 
Sbjct: 55  KKSMSRRISDFRPISLITSLYKIIAKVLAGRIREVLHETIHSTQGAFVQGRQILDAVLIA 114

Query: 79  NEAVEDYRAKRKEGVVFKIDFEKAHDHVDWDFLDKVMDEKGSG------------NVSYS 138
           NE V++ R   +EGVVFKIDFEKA+DHV WDFLD VM+ KG G            +VS++
Sbjct: 115 NEIVDEKRRSGEEGVVFKIDFEKAYDHVSWDFLDHVMEMKGFGIRWRKWMRGCLSSVSFA 174

Query: 139 LLVNGTPKGSSKASR---------------VVDILSRLILKGVEGNIIKPFKVGLKDVAW 198
           +LVNG  KG  KASR               V D+LSR++LK  E N+++ FKVG      
Sbjct: 175 VLVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFKVGRNRTRV 234

Query: 199 TALG-----------------TLITVSGFFEAIPGLKINRNKCQILGFNCDQEKLRSCDG 258
           + L                  TL  V   F  I GLK+N +K  I G N +Q  L     
Sbjct: 235 SHLQFADDTIFFSSSREEDMMTLKNVLLVFGHISGLKVNLDKSNIYGINLEQNHLSRLAE 294

Query: 259 VIGCEVGSFPSSYLGLSVGGNLRAISFLDSLLEKIRKRLASWKKSFFSKAGRLTLAKSGW 318
           ++ C+   +P  YLGL +GGN +   F D ++E+I +RL  W+K++ S  GR+TL +S  
Sbjct: 295 MLDCKASGWPILYLGLPLGGNPKTSGFWDPVIERISRRLDGWQKAYLSFGGRITLIQSCL 354

Query: 319 MEGKALFWS-----------VGRLLGDLLTRGV---KAQNL------------------- 378
                 F S           + R+  D L  GV   K  +L                   
Sbjct: 355 THMPCYFLSLFKIPASVAAKIERMQRDFLWSGVGEGKRDHLVNWDVVCKPKSRGGLGFGK 414

Query: 379 -RLRNKALLAKWLWWFSSELESLWHRIILPILFER-----LSKGVKGTFWNSWKHISL-- 438
             +RN ALL KWLW +  E  +LWH++IL I         ++  V+ +    WK I+L  
Sbjct: 415 ISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVY 474

Query: 439 --------------ELPSLLEDQWVGVRPLCSAFPHSYHLSSYKSRPVSSMLVWSRSSMS 498
                         +     +D W G +PL   +P    + + K+ P+SS+L  S    S
Sbjct: 475 QEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPISSIL-GSTRPFS 534

Query: 499 FSFGFHCSLSDREARKVASLL----------SLLDEVKFRLGRRDVFDVLWRIKILK--- 509
           ++F F  +LSD E   +  L+          S+ D+  + L    +F V      L    
Sbjct: 535 WNFTFRRNLSDSEIEDLEGLMQSFDRLHISSSVPDKRSWSLSPSGLFTVKXFFLALSQYS 594

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BLAST of ClCG10G001300 vs. TrEMBL
Match: A5BCI7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029474 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.5e-67
Identity = 206/621 (33.17%), Postives = 290/621 (46.70%), Query Frame = 1


Query: 19   KKDKANWVKDFRPISLITSVYKILAKVLANHLRKVLPSTISDSQGAFIVGRKILDQALLT 78
            KK  +  + DFRPISLITS+YKI+AKVLA  +R VL  TI  +QGAF+ GR+ILD  L+ 
Sbjct: 1165 KKSMSRRISDFRPISLITSLYKIIAKVLAGRIRGVLHETIHSTQGAFVQGRQILDAVLIA 1224

Query: 79   NEAVEDYRAKRKEGVVFKIDFEKAHDHVDWDFLDKVMDEKGSG------------NVSYS 138
            NE V++ R   +EGVVFKIDFEKA+DHV WDFLD V++ KG G            +VS++
Sbjct: 1225 NEIVDEKRRSGEEGVVFKIDFEKAYDHVSWDFLDHVLEMKGFGIRWRKWMRGCLSSVSFA 1284

Query: 139  LLVNGTPKGSSKASR---------------VVDILSRLILKGVEGNIIKPFKVGLKDVAW 198
            +LVNG  KG  KASR               V D+LSR++LK  E N+++ FKVG      
Sbjct: 1285 VLVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFKVGRNRTRV 1344

Query: 199  TALG-----------------TLITVSGFFEAIPGLKINRNKCQILGFNCDQEKLRSCDG 258
            + L                  TL  V   F  I GLK+N +K  I G N +Q  L     
Sbjct: 1345 SHLQFADDTIFFSSSREEDMMTLKNVLLVFGHISGLKVNLDKSNIYGINLEQNHLSRLAE 1404

Query: 259  VIGCEVGSFPSSYLGLSVGGNLRAISFLDSLLEKIRKRLASWKKSFFSKAGRLTLAKSGW 318
            ++ C+   +P  YLGL +GGN +   F D ++E+I +RL  W+K++ S  GR+TL +S  
Sbjct: 1405 MLDCKASGWPILYLGLPLGGNPKTSGFWDPVIERISRRLDGWQKAYLSFGGRITLIQSCL 1464

Query: 319  MEGKALFWS-----------VGRLLGDLLTRGV---KAQNL------------------- 378
                  F S           + R+  D L  GV   K  +L                   
Sbjct: 1465 THMPCYFLSLFKIPASVAAKIERMQRDFLWSGVGEGKRDHLVNWDVVCKPKSRGGLGFGK 1524

Query: 379  -RLRNKALLAKWLWWFSSELESLWHRIILPILFER-----LSKGVKGTFWNSWKHISL-- 438
              +RN ALL KWLW +  E  +LWH++IL I         ++  V+ +    WK I+L  
Sbjct: 1525 ISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVY 1584

Query: 439  --------------ELPSLLEDQWVGVRPLCSAFPHSYHLSSYKSRPVSSMLVWSRSSMS 498
                          +     +D W G +PL   +P    + + K+ P+SS+L ++R   S
Sbjct: 1585 QEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPISSILGYTR-PFS 1644

Query: 499  FSFGFHCSLSDREARKVASLLSLLDEV----------KFRLGRRDVFDVLWRIKILK--- 509
            ++F F  +LSD E   +  L+  LD +           + L    +F V      L    
Sbjct: 1645 WNFTFRRNLSDSEIEDLEGLMQSLDRLHISSSVPDKRSWFLSPSGLFTVKSFFLALSQYS 1704

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BLAST of ClCG10G001300 vs. TrEMBL
Match: M5W647_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019748mg PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.8e-67
Identity = 174/517 (33.66%), Postives = 259/517 (50.10%), Query Frame = 1


Query: 19  KKDKANWVKDFRPISLITSVYKILAKVLANHLRKVLPSTISDSQGAFIVGRKILDQALLT 78
           KK ++  V DFRPISL+TS+YK+++KVLA+ LR+VL STIS  Q AF+ GR+ILD AL+ 
Sbjct: 461 KKKESIKVSDFRPISLVTSLYKMVSKVLASRLREVLGSTISSYQSAFVQGRQILDAALIA 520

Query: 79  NEAVEDYRAKRKEGVVFKIDFEKAHDHVDWDFLDKVMDEKGSGN------------VSYS 138
           NE VE+ R   K G+VFKID EKA+DHV+W F+D+V+  KG G+             ++S
Sbjct: 521 NEVVEESRRLNKSGMVFKIDLEKAYDHVEWRFVDEVLIRKGFGDRWRSWIRGSLETANFS 580

Query: 139 LLVNGTPKGSSKASR---------------VVDILSRLILKGVEGNIIKPFKVGL----- 198
           +++NG P+G  +ASR               V+D+LSR++ K  + ++      GL     
Sbjct: 581 VMINGRPRGKFRASRGLRQGDPLSPFLFTLVMDVLSRIMEKAQDADMFHGLSPGLGMVEV 640

Query: 199 ---------------KDVAWTALGTLITVSGFFEAIPGLKINRNKCQILGFNCDQEKLRS 258
                          KD  W     L+ +   F  + G++IN++KC ++G N D   L  
Sbjct: 641 SHLQFADDTIFFIEDKDEYW---NNLLQILELFCFVSGMEINKSKCSLVGINLDDGLLNE 700

Query: 259 CDGVIGCEVGSFPSSYLGLSVGGNLRAISFLDSLLEKIRKRLASWKKSFFSKAGRLTLAK 318
             G  GCEVG++P SYLGL +GGN RAI F D ++EK+  RL  WK++  SK GRLT+ +
Sbjct: 701 LAGAWGCEVGAWPMSYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSKEGRLTMIQ 760

Query: 319 SGWMEGKALFWS-----------VGRLLGDLLTRGVKAQ--------------------- 378
           +        + S           + +L+ D L  G+  +                     
Sbjct: 761 AVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEGLDGKRNHAVSWEVVGKAKFYGGLGV 820

Query: 379 -NLRLRNKALLAKWLWWFSSELESLWHRIILPILFERLS-----KGVKGTFWNSWKHISL 435
            +LR R+ AL AKWLW F +E  +LWH++I  I     +        +G+  + W+ IS 
Sbjct: 821 GSLRARSAALRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRSLWRDISS 880

[Close]

BLAST of ClCG10G001300 vs. TrEMBL
Match: M5W647_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019748mg PE=4 SV=1)

HSP 1 Score: 40.8 bits (94), Expect = 6.3e+00
Identity = 21/52 (40.38%), Postives = 30/52 (57.69%), Query Frame = 1


Query: 439  LWRIKILKKVKFFTRQVLLGRVNTMDRLLRKKSSL-MGPFCCILCQKAEEDL 490
            +W+ K   KVK F  Q +LG++NT D L R+   L + P  C LC KA + +
Sbjct: 1008 IWKAKTPPKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGQSV 1059

HSP 2 Score: 260.4 bits (664), Expect = 5.1e-66
Identity = 178/510 (34.90%), Postives = 256/510 (50.20%), Query Frame = 1


Query: 19   KKDKANWVKDFRPISLITSVYKILAKVLANHLRKVLPSTISDSQGAFIVGRKILDQALLT 78
            KK ++  V DFRPISL+TS+YK+++KVLA+ LR+VL STIS  Q AF+ GR+ILD AL+ 
Sbjct: 755  KKKESIKVSDFRPISLVTSLYKMVSKVLASRLREVLGSTISSYQSAFVQGRQILDAALIA 814

Query: 79   NEAVEDYRAKRKEGVVFKIDFEKAHDHVDWDFLDKVMDEKGSGN------------VSYS 138
            NE VE+ R   K G+VFKID EKA+DHV+W F+D+V+  KG G+             ++S
Sbjct: 815  NEVVEESRRLNKSGMVFKIDLEKAYDHVEWRFVDEVLIRKGFGDRWRSWIRGCLETANFS 874

Query: 139  LLVNGTPKGSSKASR---------------VVDILSRLILKGVEGNIIKPFKVGLKDVAW 198
            +++NG P+G  +ASR               V+D+LSR++ K  + +       G   V  
Sbjct: 875  VMINGRPRGKIRASRGLRQGDPLSPFLFTLVMDVLSRIMEKAQDTDQFHGLSPGHGMVEV 934

Query: 199  TAL-----------------GTLITVSGFFEAIPGLKINRNKCQILGFNCDQEKLRSCDG 258
            + L                   L+ +   F  + G+KIN++KC ++G N D   L    G
Sbjct: 935  SHLQFADDTIFFIEDKEEYWNNLLQILELFCFVSGMKINKSKCSLVGINLDDGLLNELAG 994

Query: 259  VIGCEVGSFPSSYLGLSVGGNLRAISFLDSLLEKIRKRLASWKKSFFSKAGRLTLAKSGW 318
              GCEVG++P SYLGL +GGN RAI F D ++EK+  RL  WK++  SK GRLT+ ++  
Sbjct: 995  AWGCEVGAWPMSYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSKGGRLTMIQAVL 1054

Query: 319  MEGKALFWSVGR-----------LLGDLLTRGV--------------KAQ--------NL 378
                  + SV R           L+ D L  G+              KA+        +L
Sbjct: 1055 CSIPIYYMSVFRIPIGVANRIEKLMRDFLWEGLDRKRNHAVSWEVVGKAKFCGGLGVGSL 1114

Query: 379  RLRNKALLAKWLWWFSSELESLWHRIILPILFERLSKGVKGTFWNS-WKHISLELPSLL- 435
            R R+ AL AKWLW F +E  +LWH++I         + + G   N  W+ IS      L 
Sbjct: 1115 RARSAALRAKWLWRFPNEPHALWHKVI---------RSIYGLDTNGPWRDISSGYNLFLQ 1174

[Close]

BLAST of ClCG10G001300 vs. TrEMBL
Match: M5XUF8_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015473mg PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.2e-13
Identity = 74/249 (29.72%), Postives = 106/249 (42.57%), Query Frame = 1


Query: 295  GVKAQNLRLRNKALLAKWLWWFSSELESLWHRIILPI-----------------LFER-- 354
            G+   +LR R+ AL AKWLW F +E  +LWH++I  I                 LF +  
Sbjct: 1108 GLGVGSLRARSAALRAKWLWRFPNEPHALWHKVIRSIYGLDTNGPWRDISSGYNLFLQGC 1167

Query: 355  ---LSKGVKGTFWNSWKHISLELPSLLEDQWVGVRPLCSAFPHSYHLSSYKSRPVSSMLV 414
               +  GV+  FW              ED W     L   FP  ++LS  ++  +SS   
Sbjct: 1168 VFVVGCGVRVRFW--------------EDDWNRGGVLKEVFPRLFNLSRKQNHNISSFTG 1227

Query: 415  WSRSSMSFSFGFHCSLSDREARKVASLLSLLDEVKF---RLGRR---------------- 474
                S+S+ FGF   L++ E  + A LL LL+ V+    RL RR                
Sbjct: 1228 SDGFSLSWDFGFRRDLNELEITEAARLLDLLEGVRLITSRLDRRRWKLDPSGLFTCHSFC 1287

Query: 475  ---------DVFDV---LWRIKILKKVKFFTRQVLLGRVNTMDRLLRKKSSL-MGPFCCI 490
                     ++F     +W+ K   KVK F  Q +LG++NT D L R+   L + P  C 
Sbjct: 1288 AHIQNCGEGEIFSPYTQIWKAKTPPKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCA 1342

HSP 2 Score: 259.2 bits (661), Expect = 1.1e-65
Identity = 185/566 (32.69%), Postives = 272/566 (48.06%), Query Frame = 1


Query: 26  VKDFRPISLITSVYKILAKVLANHLRKVLPSTISDSQGAFIVGRKILDQALLTNEAVEDY 85
           V DF PISL+TS+YK+++KVLA+ LR+VL STIS  QGAF+ GR+ILD AL+ NE VE+ 
Sbjct: 363 VSDFWPISLVTSLYKMVSKVLASRLREVLGSTISSYQGAFVQGRQILDAALIANEVVEES 422

Query: 86  RAKRKEGVVFKIDFEKAHDHVDWDFLDKVMDEKGSGN------------VSYSLLVNGTP 145
           R   K G+VFKID EKA+DHV+W F+D V+  K  G+             ++S+++NG P
Sbjct: 423 RRLNKSGMVFKIDLEKAYDHVEWRFVDVVLIRKEFGDRRRSWIRGCLETANFSVMINGRP 482

Query: 146 KGSSKASR---------------VVDILSRLILKGVEGNIIKPFKVGLKDVAWTAL---- 205
           +G  +ASR               V+ +LSR++ K  + +       GL  V  + L    
Sbjct: 483 RGKFRASRGLRQGDPLSPFLFTLVMVVLSRIMEKAQDADKFHGLSPGLGMVEVSHLQFAD 542

Query: 206 -------------GTLITVSGFFEAIPGLKINRNKCQILGFNCDQEKLRSCDGVIGCEVG 265
                          L+ +   F  +  +KIN++KC ++G N D   L    G  GCEVG
Sbjct: 543 DTIFFIEDKEEYWNNLLQILELFCFVSVMKINKSKCSLVGINLDDGLLNELAGAWGCEVG 602

Query: 266 SFPSSYLGLSVGGNLRAISFLDSLLEKIRKRLASWKKSFFSKAGRLTLAKSGWMEGKALF 325
           ++P SYLGL  GGN  AI F D ++EK+  RL  WK++  SK GRLT+ ++        +
Sbjct: 603 AWPMSYLGLPQGGNPGAIKFWDPVVEKVENRLQKWKRACLSKGGRLTMIQAVLCSIPIYY 662

Query: 326 WS-----------VGRLLGDLLTRGVKAQ----------------------NLRLRNKAL 385
            S           + +L+ D L  G+  +                      +LR R+ AL
Sbjct: 663 MSLFDIPIGVANRIKKLMRDFLWEGLDGKRNHAVSWEVVGKAKFCGGLEVGSLRARSAAL 722

Query: 386 LAKWLWWFSSELESLWHRIILPILFERLS-----KGVKGTFWNSWKHISLELPSLL---- 445
            AKWLW F +E  +LWH++I  I     +        +G+  + W+ IS      L    
Sbjct: 723 RAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRSPWRDISSGYNLFLQGCV 782

Query: 446 ------------EDQWVGVRPLCSAFPHSYHLSSYKSRPVSSMLVWSRSSMSFSFGFHCS 490
                       ED W     L   FP  ++LS              +  +S+ FGF  +
Sbjct: 783 FVVGCGVRVRFWEDDWSRGGVLKEVFPRLFNLS-------------RKFPLSWDFGFRRN 842

[Close]

BLAST of ClCG10G001300 vs. TAIR10
Match: AT4G20520.1 (AT4G20520.1 RNA binding;RNA-directed DNA polymerases)

HSP 1 Score: 49.7 bits (117), Expect = 6.9e-06
Identity = 24/76 (31.58%), Postives = 39/76 (51.32%), Query Frame = 1


Query: 46  LANHLRKVLPSTISDSQGAFIVGRKILDQALLTNEAVEDYRAKR--KEGVVFKIDFEKAH 105
           +   L+ ++ + I  +Q +FI GR   D  +   EAV   R K+  K  ++ K+D EKA+
Sbjct: 1   MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60

Query: 106 DHVDWDFLDKVMDEKG 120
           D + WD+L+  +   G
Sbjct: 61  DRIRWDYLEDTLISAG 76

[Close]

BLAST of ClCG10G001300 vs. NCBI nr
Match: gi|694414464|ref|XP_009335445.1| (PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri])

HSP 1 Score: 291.2 bits (744), Expect = 3.9e-75
Identity = 194/531 (36.53%), Postives = 271/531 (51.04%), Query Frame = 1


Query: 19  KKDKANWVKDFRPISLITSVYKILAKVLANHLRKVLPSTISDSQGAFIVGRKILDQALLT 78
           KK  +  V D+RPISL+T +YKI+AK L + LR+V+ STIS  QG F+ GR+ILD  L+ 
Sbjct: 322 KKSDSLKVTDYRPISLVTGLYKIVAKTLVSRLREVMGSTISPHQGGFVKGRQILDAVLIA 381

Query: 79  NEAVEDYRAKRKEGVVFKIDFEKAHDHVDWDFLDKVMDEKGSGN------------VSYS 138
           NE VE+ R K++EG++FKIDFEKA+DHV+W FLD+++  KG GN             ++S
Sbjct: 382 NELVEEVRQKKEEGLMFKIDFEKAYDHVEWRFLDEILQRKGFGNRWRKWVQGCQNSANFS 441

Query: 139 LLVNGTPKGSSKASR---------------VVDILSRLILKGVEGNIIKPFKVGLKDVAW 198
           +L+NG PKG   ASR               VVD+LSRL+ K  E ++IK   +G + V  
Sbjct: 442 ILINGRPKGKFHASRRLRQGDPLSPFLFTLVVDVLSRLMEKAHENHLIKGLGIGQERVEI 501

Query: 199 TAL-----------------GTLITVSGFFEAIPGLKINRNKCQILGFNCDQEKLRSCDG 258
           + L                   L+ V   F  I GLKIN+ KC + G N D EKL+    
Sbjct: 502 SHLQFADDTIFFLAEDEDVWNNLLEVLNLFCTISGLKINKAKCSMAGINSDCEKLKGMAD 561

Query: 259 VIGCEVGSFPSSYLGLSVGGNLRAISFLDSLLEKIRKRLASWKKSFFSKAGRLTLAKSGW 318
             GCEVGS+P  YLGL +GG  +A+ F D ++EK+ KRL SWKK+F SK GRLTL +   
Sbjct: 562 SWGCEVGSWPIKYLGLPLGGRPKALMFWDPVVEKMEKRLQSWKKAFLSKGGRLTLIQFVL 621

Query: 319 MEGKALFWS--------VGR---LLGDLLTRGVK-----------------------AQN 378
                 + S        +GR   L+   L  GV+                         N
Sbjct: 622 GSLPIYYMSLFKIPCGVIGRLEKLMKGFLWEGVEEGKKNHLVKWEIVIKSKEEGGLCVGN 681

Query: 379 LRLRNKALLAKWLWWFSSELESLWHRIILPILFERLSKGVKGTFWNS-----------WK 438
           LR + +ALLAKWLW F  E  SLWH++I      R   G++   WN+           WK
Sbjct: 682 LRNQKEALLAKWLWRFPKEPNSLWHKVI------RSKYGLQDNGWNANPPLRGSSRSPWK 741

Query: 439 HISLELPSLL----------------EDQWVGVRPLCSAFPHSYHLSSYKSRPVSSMLVW 445
            IS  L S L                ED W+   PL   +P  + LS   ++ +SS +  
Sbjct: 742 DISCGLQSFLQCCKFEVGNGERVRFWEDGWLEGGPLKEQYPRLFLLSRMHNQNISSFVDL 801

[Close]

BLAST of ClCG10G001300 vs. NCBI nr
Match: gi|658048925|ref|XP_008360144.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica])

HSP 1 Score: 273.1 bits (697), Expect = 1.1e-69
Identity = 200/610 (32.79%), Postives = 292/610 (47.87%), Query Frame = 1


Query: 19  KKDKANWVKDFRPISLITSVYKILAKVLANHLRKVLPSTISDSQGAFIVGRKILDQALLT 78
           KK  +  V DFRPISL+T +YKI+AK LA+ L++VL STIS +QGAF+  R+ILD  L+ 
Sbjct: 27  KKSDSMKVTDFRPISLVTGLYKIMAKTLASRLKEVLGSTISQNQGAFVKDRQILDAVLIA 86

Query: 79  NEAVEDYRAKRKEGVVFKIDFEKAHDHVDWDFLDKVMDEKGSGN------------VSYS 138
           NE VE+ R K++EG+V KIDFEKA+DHV+W FLD+V+  K  GN             ++S
Sbjct: 87  NEVVEEVRQKKEEGLVLKIDFEKAYDHVEWRFLDEVLQRKSFGNRWRKWMQGCLSSANFS 146

Query: 139 LLVNGTPKGSSKASR---------------VVDILSRLILKGVEGNIIKPFKVGLKDVAW 198
           +L+NG P+G  +ASR               VVD+LSRL+ K  E ++IK   +G + V  
Sbjct: 147 VLINGRPRGKFQASRGLRQGDPLSPFLFTLVVDVLSRLMEKAQENHLIKGLCIGQEKVEI 206

Query: 199 TAL-----------------GTLITVSGFFEAIPGLKINRNKCQILGFNCDQEKLRSCDG 258
           + L                   L+ +   F ++ GLKIN+ KC + G N D EKL     
Sbjct: 207 SHLQFADDTIFFLAXBEGGWNNLLELLKLFCSVSGLKINKAKCYLAGINSDCEKLNRLAD 266

Query: 259 VIGCEVGSFPSSYLGLSVGGNLRAISFLDSLLEKIRKRLASWKKSFFSKAGRLTLAKSGW 318
             GCEVGS+P  YLGL +GG  RA+ F D  ++K+ KRL SWKK+F S+ GRLTL +S  
Sbjct: 267 SWGCEVGSWPIKYLGLPLGGRPRALKFWDPXVDKMEKRLQSWKKAFLSRGGRLTLIQSVL 326

Query: 319 MEGKALFWS--------VGR---LLGDLLTRGVK-----------------------AQN 378
                 + S        +GR   L+   L  GV+                         N
Sbjct: 327 GSLPTYYMSLFKMPCGVIGRLEKLMKGFLWEGVEEGKKNNLVKWEIVIKSKEEGGLGVGN 386

Query: 379 LRLRNKALLAKWLWWFSSELESLWHRIILPILFERLSKGVKGTFWNSWKHISLELPSLLE 438
           LR RN+ALLAKWLW F  E  SLWH++I      R   G++   WN++  I     S  +
Sbjct: 387 LRNRNEALLAKWLWRFPKEPHSLWHKVI------RSKYGLQDNGWNAFPPIRGSXRSPWK 446

Query: 439 DQWVGVRPL--CSAFP--HSYHLSSYKS-----------------------RPVSSMLVW 490
           D  +G +    C  F   +   +  ++                        + +SS +  
Sbjct: 447 DISIGSQLFLHCCKFEVGNGERVRFWEDGWLDGGPLKEQFPRLFLLSRKHNQNISSFVDL 506

[Close]

BLAST of ClCG10G001300 vs. NCBI nr
Match: gi|658030603|ref|XP_008350747.1| (PREDICTED: uncharacterized protein LOC103414113 [Malus domestica])

HSP 1 Score: 272.7 bits (696), Expect = 1.4e-69
Identity = 200/610 (32.79%), Postives = 292/610 (47.87%), Query Frame = 1


Query: 19   KKDKANWVKDFRPISLITSVYKILAKVLANHLRKVLPSTISDSQGAFIVGRKILDQALLT 78
            KK  +  V DFRPISL+T +YKI+AK LA+ L++VL STIS +QGAF+  R+ILD  L+ 
Sbjct: 1050 KKSDSMKVTDFRPISLVTGLYKIMAKTLASRLKEVLGSTISQNQGAFVKDRQILDAVLIA 1109

Query: 79   NEAVEDYRAKRKEGVVFKIDFEKAHDHVDWDFLDKVMDEKGSGN------------VSYS 138
            NE VE+ R K++EG+V KIDFEKA+DHV+W FLD+V+  K  GN             ++S
Sbjct: 1110 NEVVEEVRQKKEEGLVLKIDFEKAYDHVEWRFLDEVLQRKSFGNRWRKWMQGCLSSANFS 1169

Query: 139  LLVNGTPKGSSKASR---------------VVDILSRLILKGVEGNIIKPFKVGLKDVAW 198
            +L+NG P+G  +ASR               VVD+LSRL+ K  E ++IK   +G + V  
Sbjct: 1170 VLINGRPRGKFQASRGLRQGDPLSPFLFTLVVDVLSRLMEKAQENHLIKGLCIGQEKVEI 1229

Query: 199  TAL-----------------GTLITVSGFFEAIPGLKINRNKCQILGFNCDQEKLRSCDG 258
              L                   L+ +   F ++ GLKIN+ KC + G N D EKL     
Sbjct: 1230 XHLQFADDTIFFLAEDEGGWNNLLELLKLFCSVSGLKINKAKCYLAGINSDCEKLNRLAD 1289

Query: 259  VIGCEVGSFPSSYLGLSVGGNLRAISFLDSLLEKIRKRLASWKKSFFSKAGRLTLAKSGW 318
              GCEVGS+P  YLGL +GG  RA+ F D +++K+ KRL SWKK+F S+ GRLTL +S  
Sbjct: 1290 SWGCEVGSWPIKYLGLPLGGRPRALKFWDPVVDKMEKRLQSWKKAFLSRGGRLTLIQSVL 1349

Query: 319  MEGKALFWS--------VGR---LLGDLLTRGVK-----------------------AQN 378
                  + S        +GR   L+   L  GV+                         N
Sbjct: 1350 GSLPTYYMSLFKMPCGVIGRLEKLMKGFLWEGVEEGKKNNLVKWEIVIKSKEEGGLGVGN 1409

Query: 379  LRLRNKALLAKWLWWFSSELESLWHRIILPILFERLSKGVKGTFWNSWKHISLELPSLLE 438
            LR RN+ALLAKWLW F  E  SLWH++I      R   G++   WN++  I     S  +
Sbjct: 1410 LRNRNEALLAKWLWRFPKEPHSLWHKVI------RSKYGLQDNGWNAFPPIRGSSRSPWK 1469

Query: 439  DQWVGVRPL--CSAFP--HSYHLSSYKS-----------------------RPVSSMLVW 490
            D  +G +    C  F   +   +  ++                        + +SS +  
Sbjct: 1470 DISIGSQLFLHCCKFEVGNGERVRFWEDGWLDGGPLKEQFPRLFLLSRKHNQNISSFVDL 1529

[Close]

BLAST of ClCG10G001300 vs. NCBI nr
Match: gi|657990185|ref|XP_008387315.1| (PREDICTED: uncharacterized protein LOC103449768 [Malus domestica])

HSP 1 Score: 269.6 bits (688), Expect = 1.2e-68
Identity = 199/610 (32.62%), Postives = 290/610 (47.54%), Query Frame = 1


Query: 19   KKDKANWVKDFRPISLITSVYKILAKVLANHLRKVLPSTISDSQGAFIVGRKILDQALLT 78
            KK  +  V DFRPISL+T +YKI+AK LA+ L++VL STIS +QGAF+  R+ILD  L+ 
Sbjct: 1501 KKSDSMKVTDFRPISLVTGLYKIMAKTLASRLKEVLGSTISQNQGAFVKDRQILDAVLIA 1560

Query: 79   NEAVEDYRAKRKEGVVFKIDFEKAHDHVDWDFLDKVMDEKGSGN------------VSYS 138
            NE VE+ R K++EG+V KIDFEKA+DHV+W FLD+V+  K  GN             ++S
Sbjct: 1561 NEVVEEVRQKKEEGLVLKIDFEKAYDHVEWRFLDEVLQRKSFGNRWRKWMQGCLSSANFS 1620

Query: 139  LLVNGTPKGSSKASR---------------VVDILSRLILKGVEGNIIKPFKVGLKDVAW 198
            +L+NG P+G  + SR               VVD+LSRL+ K  E ++IK   +G + V  
Sbjct: 1621 VLINGRPRGKFQXSRGLRQGDPLSPFLFTLVVDVLSRLMEKAQENHLIKGLCIGQEKVEI 1680

Query: 199  TAL-----------------GTLITVSGFFEAIPGLKINRNKCQILGFNCDQEKLRSCDG 258
              L                   L+ +   F ++ GLKIN+ KC + G N D EKL     
Sbjct: 1681 XHLQFADDTIFFLAXXEGGWNNLLELLKLFCSVSGLKINKAKCYLXGINSDCEKLNRLAD 1740

Query: 259  VIGCEVGSFPSSYLGLSVGGNLRAISFLDSLLEKIRKRLASWKKSFFSKAGRLTLAKSGW 318
              GCEVGS P  YLGL +GG  RA+ F D +++K+ KRL SWKK+F S+ GRLTL +S  
Sbjct: 1741 SWGCEVGSXPIKYLGLPLGGRPRALKFWDPVVDKMEKRLQSWKKAFLSRGGRLTLIQSVL 1800

Query: 319  MEGKALFWS--------VGR---LLGDLLTRGVK-----------------------AQN 378
                  + S        +GR   L+   L  GV+                         N
Sbjct: 1801 GSLPTYYMSLFKMPCGVIGRLEKLMKGFLWEGVEEGKKNNLVKWEIVIKSKEEGGLGVGN 1860

Query: 379  LRLRNKALLAKWLWWFSSELESLWHRIILPILFERLSKGVKGTFWNSWKHISLELPSLLE 438
            LR RN+ALLAKWLW F  E  SLWH++I      R   G++   WN++  I     S  +
Sbjct: 1861 LRNRNEALLAKWLWRFPXEPHSLWHKVI------RSKYGLQDNGWNAFPPIRGSSRSPWK 1920

Query: 439  DQWVGVRPL--CSAFP--HSYHLSSYKS-----------------------RPVSSMLVW 490
            D  +G +    C  F   +   +  ++                        + +SS +  
Sbjct: 1921 DISIGSQLFLHCCKFEVGNGERVRFWEDGWLDGGXLKEQFPRLFLLSRKHNQNISSFVDL 1980

[Close]

BLAST of ClCG10G001300 vs. NCBI nr
Match: gi|147839313|emb|CAN72359.1| (hypothetical protein VITISV_000131 [Vitis vinifera])

HSP 1 Score: 265.0 bits (676), Expect = 3.0e-67
Identity = 207/621 (33.33%), Postives = 290/621 (46.70%), Query Frame = 1


Query: 19  KKDKANWVKDFRPISLITSVYKILAKVLANHLRKVLPSTISDSQGAFIVGRKILDQALLT 78
           KK  +  + DFRPISLITS+YKI+AKVLA  +R+VL  TI  +QGAF+ GR+ILD  L+ 
Sbjct: 55  KKSMSRRISDFRPISLITSLYKIIAKVLAGRIREVLHETIHSTQGAFVQGRQILDAVLIA 114

Query: 79  NEAVEDYRAKRKEGVVFKIDFEKAHDHVDWDFLDKVMDEKGSG------------NVSYS 138
           NE V++ R   +EGVVFKIDFEKA+DHV WDFLD VM+ KG G            +VS++
Sbjct: 115 NEIVDEKRRSGEEGVVFKIDFEKAYDHVSWDFLDHVMEMKGFGIRWRKWMRGCLSSVSFA 174

Query: 139 LLVNGTPKGSSKASR---------------VVDILSRLILKGVEGNIIKPFKVGLKDVAW 198
           +LVNG  KG  KASR               V D+LSR++LK  E N+++ FKVG      
Sbjct: 175 VLVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFKVGRNRTRV 234

Query: 199 TALG-----------------TLITVSGFFEAIPGLKINRNKCQILGFNCDQEKLRSCDG 258
           + L                  TL  V   F  I GLK+N +K  I G N +Q  L     
Sbjct: 235 SHLQFADDTIFFSSSREEDMMTLKNVLLVFGHISGLKVNLDKSNIYGINLEQNHLSRLAE 294

Query: 259 VIGCEVGSFPSSYLGLSVGGNLRAISFLDSLLEKIRKRLASWKKSFFSKAGRLTLAKSGW 318
           ++ C+   +P  YLGL +GGN +   F D ++E+I +RL  W+K++ S  GR+TL +S  
Sbjct: 295 MLDCKASGWPILYLGLPLGGNPKTSGFWDPVIERISRRLDGWQKAYLSFGGRITLIQSCL 354

Query: 319 MEGKALFWS-----------VGRLLGDLLTRGV---KAQNL------------------- 378
                 F S           + R+  D L  GV   K  +L                   
Sbjct: 355 THMPCYFLSLFKIPASVAAKIERMQRDFLWSGVGEGKRDHLVNWDVVCKPKSRGGLGFGK 414

Query: 379 -RLRNKALLAKWLWWFSSELESLWHRIILPILFER-----LSKGVKGTFWNSWKHISL-- 438
             +RN ALL KWLW +  E  +LWH++IL I         ++  V+ +    WK I+L  
Sbjct: 415 ISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVY 474

Query: 439 --------------ELPSLLEDQWVGVRPLCSAFPHSYHLSSYKSRPVSSMLVWSRSSMS 498
                         +     +D W G +PL   +P    + + K+ P+SS+L  S    S
Sbjct: 475 QEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPISSIL-GSTRPFS 534

Query: 499 FSFGFHCSLSDREARKVASLL----------SLLDEVKFRLGRRDVFDVLWRIKILK--- 509
           ++F F  +LSD E   +  L+          S+ D+  + L    +F V      L    
Sbjct: 535 WNFTFRRNLSDSEIEDLEGLMQSFDRLHISSSVPDKRSWSLSPSGLFTVKXFFLALSQYS 594

The following BLAST results are available for this feature:

BLAST of ClCG10G001300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LORF2_HUMAN	1.8e-08	22.65	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1	[more]
LORF2_MOUSE	2.6e-07	21.43	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2	[more]
YTX2_XENLA	5.9e-07	32.99	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis PE=3 SV=1	[more]

BLAST of ClCG10G001300 vs. TrEMBL


Match Name	E-value	Identity	Description
A5BI72_VITVI	2.1e-67	33.33	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000131 PE=4 SV=1	[more]
A5BCI7_VITVI	3.5e-67	33.17	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029474 PE=4 SV=1	[more]
M5W647_PRUPE	7.8e-67	33.66	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019748mg PE=4 S...	[more]
M5W647_PRUPE	6.3e+00	40.38	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019748mg PE=4 S...	[more]
M5XUF8_PRUPE	2.2e-13	29.72	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015473mg PE=4 S...	[more]

BLAST of ClCG10G001300 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G20520.1	6.9e-06	31.58	RNA binding;RNA-directed DNA polymerases	[more]

BLAST of ClCG10G001300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|694414464\|ref\|XP_009335445.1\|	3.9e-75	36.53	PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri]	[more]
gi\|658048925\|ref\|XP_008360144.1\|	1.1e-69	32.79	PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica]	[more]
gi\|658030603\|ref\|XP_008350747.1\|	1.4e-69	32.79	PREDICTED: uncharacterized protein LOC103414113 [Malus domestica]	[more]
gi\|657990185\|ref\|XP_008387315.1\|	1.2e-68	32.62	PREDICTED: uncharacterized protein LOC103449768 [Malus domestica]	[more]
gi\|147839313\|emb\|CAN72359.1\|	3.0e-67	33.33	hypothetical protein VITISV_000131 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000477	RT_dom
IPR026960	RVT-Znf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G001300.1	ClCG10G001300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 19..117 score: 2.7
IPR000477	Reverse transcriptase domain	PROFILE	PS50878	RT_POL	coord: 1..232 score: 8
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 434..488 score: 4.
None	No IPR available	PANTHER	PTHR19446	REVERSE TRANSCRIPTASES	coord: 18..265 score: 3.5
None	No IPR available	PANTHER	PTHR19446:SF368	SUBFAMILY NOT NAMED	coord: 18..265 score: 3.5

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG10G001300	Melon (DHL92) v3.6.1	medwcgB312
ClCG10G001300	Melon (DHL92) v3.6.1	medwcgB401
ClCG10G001300	Silver-seed gourd	carwcgB0754
ClCG10G001300	Silver-seed gourd	carwcgB0941
ClCG10G001300	Silver-seed gourd	carwcgB1021
ClCG10G001300	Cucumber (Chinese Long) v3	cucwcgB194
ClCG10G001300	Cucumber (Chinese Long) v3	cucwcgB196
ClCG10G001300	Watermelon (97103) v2	wcgwmbB038
ClCG10G001300	Watermelon (97103) v2	wcgwmbB053
ClCG10G001300	Wax gourd	wcgwgoB113
ClCG10G001300	Wax gourd	wcgwgoB128
ClCG10G001300	Watermelon (Charleston Gray)	wcgwcgB003
ClCG10G001300	Cucumber (Gy14) v1	cgywcgB535
ClCG10G001300	Cucumber (Gy14) v1	cgywcgB556
ClCG10G001300	Cucurbita maxima (Rimu)	cmawcgB284
ClCG10G001300	Cucurbita maxima (Rimu)	cmawcgB452
ClCG10G001300	Cucurbita maxima (Rimu)	cmawcgB515
ClCG10G001300	Cucurbita maxima (Rimu)	cmawcgB721
ClCG10G001300	Cucurbita moschata (Rifu)	cmowcgB276
ClCG10G001300	Cucurbita moschata (Rifu)	cmowcgB453
ClCG10G001300	Cucurbita moschata (Rifu)	cmowcgB513
ClCG10G001300	Cucurbita moschata (Rifu)	cmowcgB724
ClCG10G001300	Wild cucumber (PI 183967)	cpiwcgB190
ClCG10G001300	Wild cucumber (PI 183967)	cpiwcgB192
ClCG10G001300	Cucumber (Chinese Long) v2	cuwcgB189
ClCG10G001300	Cucumber (Chinese Long) v2	cuwcgB191
ClCG10G001300	Melon (DHL92) v3.5.1	mewcgB317
ClCG10G001300	Melon (DHL92) v3.5.1	mewcgB415
ClCG10G001300	Watermelon (97103) v1	wcgwmB045
ClCG10G001300	Watermelon (97103) v1	wcgwmB056
ClCG10G001300	Cucurbita pepo (Zucchini)	cpewcgB193
ClCG10G001300	Cucurbita pepo (Zucchini)	cpewcgB227
ClCG10G001300	Cucurbita pepo (Zucchini)	cpewcgB631
ClCG10G001300	Cucurbita pepo (Zucchini)	cpewcgB772
ClCG10G001300	Bottle gourd (USVL1VR-Ls)	lsiwcgB001
ClCG10G001300	Bottle gourd (USVL1VR-Ls)	lsiwcgB389
ClCG10G001300	Cucumber (Gy14) v2	cgybwcgB174
ClCG10G001300	Cucumber (Gy14) v2	cgybwcgB176