ClCG10G001060 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAACCGTAGGCAGCCATTCTAGAACAGAGAAAAATACGTTGAAGTTCGTGTTCGTGGCCACCACACGTCTGAACCTGCTCCTTCTCTCTTCTTGGCTGCGATTTTCCGGCTTCAATCACTCGCCGGGACTCACTTTCTACGGTATTTTCTTTCCTTTCAAACGCTTCTGATTTTTCTTTCCTTCATTTTCAATGTTTTTCGATGTCAATTTTGTAGTTTCTTCATCTTCTAGCTCAAAGAAAATTCAATTTGTAGGGTTACATGTGATCAGATACTTGTTTTCCGAATTCTCCCGATTCTAGAATTTCAGTGTGTGTGTTTTTAATGCTATTTTGTGCGAATTACTCTCTCGTTGCGGGAGCATGATGTATGATTGATTTTACTGCTGGAGAAATTCATACGGCTTTCTTTTTGTTCTTCCCGCTCGGTGTATTTCTATTGATTTTTCTAGATTTTCCTTCGTGTGGTTGGTTAGTGATTTGAAAGGTTTAATTGGAATCATCTCTCATTTGGGTGTAATGATATAGACTGTTTATTGGTCATCAGTTATCATTGTCAATTTCTCTTCGAATTTGCTCGATTATGGTTGTCGAAGATTGACGGAGAATCATCTTTATGATGTGTTTTTTTCTTGTTTTTATGAGTTTGATTTAGCTCTGGCCTCCGTGTGAGGGTGGTTATACCTTGAAATTTAAAAGTATGAATTTCTAACATCTGATATCTGAGGAAGAGCAAACTACCTTTTGTTGGCTTTTTTGGAATTGGGGAGTGTGAAGCAAGTAAAGTGACTATGGGGTAGGATCAAACTCCCTAAAAGGAAAACTCAGTCTATTAATGAGACCGTTATCGTCTGGGATTAGTTGGGGTGCGTATAAGCTAGCTCGGATTACTCACAGTATAAAAAGCAAATAGAAATTGAAGAGAAACTATGATTCAAAATAAATTGATATCTTTACGGTGTTATCTTTTATAAAGTTCCTTCGTTCTTTGCTTTTGCCTTGTGTCTTAAAACATGGAAGTTGATAAATATTTGTCCTAGAGGGCATCTGACCTTTCTACTTTCTATCCCCTTTTGTTTCTTAACCCTATATTTTTGCAGGAAAAATCTTATTAAGAAGTAGTAATGGACTTTATATTAAGAGGAATGAATGATGAGGCATCTGGGTGCTACTCTAATGATATGGACATCCAGAGATGCCCGTTCCTCAGGAATATCAATAAACCAACCTGCTTTTCCTTCTCCACCTTGAATATCACCTTCCCGGTAACTTCCATATCTGGTCTACCGCTACACATTTGCAAAATTGCAATGGCCGATCAGGTTTAGAGAAGTCAATATATTATTTTTGAATTTTCAGGTTCGGGGAGCGAAAGGGCCAATTTTTGAGGAGGGTCCTAATTTTGACACAGCATTTAAGCTCTTTCATGGTAAAGATGGGGTTGTCCCACTATCTGAGAGATCCGGCTTTGAGAAAATATCGTTAGAAGCAGAGATGGCTCCTCATTTCAACCCCTTGGCTGCAAAAGCTGCAACCATCAGTCTGTCAGCTTTTGGACCAGGAGGGCCATTCAGCTTCGGTAACTTCTCTGAGAAATGGAAGAAACAAAAGTCTGAGGCATCCAACAAGAAAGATCATTTGTCACAGGTATATGTGCATTCTTCTTAACCATTAAACTTGGGACACAAAGTTAGATCATCCGTACTACTTTTTTTAAGGGATGCCTACTTCAGTGGAGACTGAATTTCAGAATTTAATATAATTTGCTCCAAAAAATGTGATTGTCGTTGGCTTCTGTTGCTAGAAAAGAGCCAGAATTTGACAGGCATAAAAATCTTGAATCTAGCATGGTTATGAAGGAAAGCTAGAAAATATGGGACTTGAACTTGGGAAAACATCACACGTGGAGTGGGGGATAGTCTGATAATATGATGTTTGGAAGACTTTTACTCTGTCTATTTTCCTTAAGATTTGAAGGGATTTAAATCCCGATGGATTACAAACGAGTATTTTCGTTTGTCATCCCTTAAAATGGTCAAAGTATACAAGATTTTAAAGAAAATATCTCATTAAAACAAAAAGATTTCATAGTCAATTATTAATTTAATTTCACTAGGTTTCACTTTTCATTTACAAATTTATACAAGATTTTAAAGAAAATATCTCATTAAAACAAAAAGACTTCTTAGTCAATTATTAATTTACTTTCACTAGGTTTCACTTTTCATTCACAAATTAAGATTTTAAAGTGTTCTCTTCTTGCCTGCCCCCTTTTTTCAAAAAGACGAAAATGGTTATATTTGTAGAATCCTTAGTTTCTTTTCATTTCTATCAGATAGTCCGAACAAAATTGTTTAATCAAATAAATTTCAGGTCTTTCTTATTCCAAACAAGACAACAATTTTAAGATCGTTTCTAGATTTTCAGTTTGTATAATAGTCGTTGGTAAGCCTTTGCTCATGAACCTTCTTTCTGTGTTTATTTCATTTCTGTTTCTTGATGTTTTCCAGAAAAAAGGAAGTTCATCCAAGCACGAGGCTCTGGGAAGTGACTGGTTGGAAACAGGAAACTGCCCAATTGCGAAGTCTTTTAGAGCTGTTAGCGGAGTCCTCCCACTTGTTGCAACAGCTTTTCAGCTACCACCTGGCATGAAGCTTAAGTGCCCGCCCGCAATAGTTGCTGCCCGTGCTGCCCTAGCTCGTACAGCATTTGTAAAAAATCTGCGTCCTCAGCCACTTCCTTCAAAAATGCTTGTCATTGCGGCCTTAGGCATGGCGGCAAACGTTCCTCTTGGTATATGGAGGGAGCACACTAAGAAATTTTCGTTTTCATGGTTTGTAGCAATTCATGCAGCTGTACCCTTTATTGCCATGCTTCGGAAATCTGTCTTGATGCCAAAGACAGCCATGGCAATGACCATTGCTGCTTCTGTACTAGGGCAGGTTATCGGCTCAAGGGCTGAACGTATGCGACTGAAAGCTATTGCTGAAAAGGGAAAGGCAACAACAATTATGCCAACACTAGAGTCTACTCCAAGCTATGAGTTAACCCAGGTCGATGCCATAGTAGGTGGTCGTTGTGGTGTAGAAAGAATGGTGTTTGATCCTCTCCAGAAGAATGGTAGGCAAACGTCTTCCCCAGCGAATGTATGCTCATAAGGTGACTTCGTATAGATACAAGCATATTATGAAATAAATGAAGTGCCATTGATATTGTTAATGGGACTCAACCTGTTATGAAATGTAGATTTAATGGATATTCAACCTCTGTCATGGTTGGCTATCATATAATGTTATGTATTATGCTTTTGAAAAGCTTCTCTTTAGCTAAATATAAATGAAAAATCCTTCTTATAGACTTGTTTAATGTGAAAAAAGTCTTGTAATGTTATCTCAGTTCATGTTGCCTTCTGAAGTGCCCCTACAAGATGGTGATTATGGAAT TTAACCGTAGGCAGCCATTCTAGAACAGAGAAAAATACGTTGAAGTTCGTGTTCGTGGCCACCACACGTCTGAACCTGCTCCTTCTCTCTTCTTGGCTGCGATTTTCCGGCTTCAATCACTCGCCGGGACTCACTTTCTACGGAAAAATCTTATTAAGAAGTAGTAATGGACTTTATATTAAGAGGAATGAATGATGAGGCATCTGGGTGCTACTCTAATGATATGGACATCCAGAGATGCCCGTTCCTCAGGAATATCAATAAACCAACCTGCTTTTCCTTCTCCACCTTGAATATCACCTTCCCGGTTCGGGGAGCGAAAGGGCCAATTTTTGAGGAGGGTCCTAATTTTGACACAGCATTTAAGCTCTTTCATGGTAAAGATGGGGTTGTCCCACTATCTGAGAGATCCGGCTTTGAGAAAATATCGTTAGAAGCAGAGATGGCTCCTCATTTCAACCCCTTGGCTGCAAAAGCTGCAACCATCAGTCTGTCAGCTTTTGGACCAGGAGGGCCATTCAGCTTCGGAAAGCTAGAAAATATGGGACTTGAACTTGGGAAAACATCACACGTGGAGTGGGGGATAAAAAAAGGAAGTTCATCCAAGCACGAGGCTCTGGGAAGTGACTGGTTGGAAACAGGAAACTGCCCAATTGCGAAGTCTTTTAGAGCTGTTAGCGGAGTCCTCCCACTTGTTGCAACAGCTTTTCAGCTACCACCTGGCATGAAGCTTAAGTGCCCGCCCGCAATAGTTGCTGCCCGTGCTGCCCTAGCTCGTACAGCATTTGTAAAAAATCTGCGTCCTCAGCCACTTCCTTCAAAAATGCTTGTCATTGCGGCCTTAGGCATGGCGGCAAACGTTCCTCTTGGTATATGGAGGGAGCACACTAAGAAATTTTCGTTTTCATGGTTTGTAGCAATTCATGCAGCTGTACCCTTTATTGCCATGCTTCGGAAATCTGTCTTGATGCCAAAGACAGCCATGGCAATGACCATTGCTGCTTCTGTACTAGGGCAGGTTATCGGCTCAAGGGCTGAACGTATGCGACTGAAAGCTATTGCTGAAAAGGGAAAGGCAACAACAATTATGCCAACACTAGAGTCTACTCCAAGCTATGAGTTAACCCAGGTCGATGCCATAGTAGGTGGTCGTTGTGGTGTAGAAAGAATGGTGTTTGATCCTCTCCAGAAGAATGGTAGGCAAACGTCTTCCCCAGCGAATGTATGCTCATAAGGTGACTTCGTATAGATACAAGCATATTATGAAATAAATGAAGTGCCATTGATATTGTTAATGGGACTCAACCTGTTATGAAATGTAGATTTAATGGATATTCAACCTCTGTCATGGTTGGCTATCATATAATGTTATGTATTATGCTTTTGAAAAGCTTCTCTTTAGCTAAATATAAATGAAAAATCCTTCTTATAGACTTGTTTAATGTGAAAAAAGTCTTGTAATGTTATCTCAGTTCATGTTGCCTTCTGAAGTGCCCCTACAAGATGGTGATTATGGAAT ATGGACTTTATATTAAGAGGAATGAATGATGAGGCATCTGGGTGCTACTCTAATGATATGGACATCCAGAGATGCCCGTTCCTCAGGAATATCAATAAACCAACCTGCTTTTCCTTCTCCACCTTGAATATCACCTTCCCGGTTCGGGGAGCGAAAGGGCCAATTTTTGAGGAGGGTCCTAATTTTGACACAGCATTTAAGCTCTTTCATGGTAAAGATGGGGTTGTCCCACTATCTGAGAGATCCGGCTTTGAGAAAATATCGTTAGAAGCAGAGATGGCTCCTCATTTCAACCCCTTGGCTGCAAAAGCTGCAACCATCAGTCTGTCAGCTTTTGGACCAGGAGGGCCATTCAGCTTCGGAAAGCTAGAAAATATGGGACTTGAACTTGGGAAAACATCACACGTGGAGTGGGGGATAAAAAAAGGAAGTTCATCCAAGCACGAGGCTCTGGGAAGTGACTGGTTGGAAACAGGAAACTGCCCAATTGCGAAGTCTTTTAGAGCTGTTAGCGGAGTCCTCCCACTTGTTGCAACAGCTTTTCAGCTACCACCTGGCATGAAGCTTAAGTGCCCGCCCGCAATAGTTGCTGCCCGTGCTGCCCTAGCTCGTACAGCATTTGTAAAAAATCTGCGTCCTCAGCCACTTCCTTCAAAAATGCTTGTCATTGCGGCCTTAGGCATGGCGGCAAACGTTCCTCTTGGTATATGGAGGGAGCACACTAAGAAATTTTCGTTTTCATGGTTTGTAGCAATTCATGCAGCTGTACCCTTTATTGCCATGCTTCGGAAATCTGTCTTGATGCCAAAGACAGCCATGGCAATGACCATTGCTGCTTCTGTACTAGGGCAGGTTATCGGCTCAAGGGCTGAACGTATGCGACTGAAAGCTATTGCTGAAAAGGGAAAGGCAACAACAATTATGCCAACACTAGAGTCTACTCCAAGCTATGAGTTAACCCAGGTCGATGCCATAGTAGGTGGTCGTTGTGGTGTAGAAAGAATGGTGTTTGATCCTCTCCAGAAGAATGGTAGGCAAACGTCTTCCCCAGCGAATGTATGCTCATAA MDFILRGMNDEASGCYSNDMDIQRCPFLRNINKPTCFSFSTLNITFPVRGAKGPIFEEGPNFDTAFKLFHGKDGVVPLSERSGFEKISLEAEMAPHFNPLAAKAATISLSAFGPGGPFSFGKLENMGLELGKTSHVEWGIKKGSSSKHEALGSDWLETGNCPIAKSFRAVSGVLPLVATAFQLPPGMKLKCPPAIVAARAALARTAFVKNLRPQPLPSKMLVIAALGMAANVPLGIWREHTKKFSFSWFVAIHAAVPFIAMLRKSVLMPKTAMAMTIAASVLGQVIGSRAERMRLKAIAEKGKATTIMPTLESTPSYELTQVDAIVGGRCGVERMVFDPLQKNGRQTSSPANVCS
BLAST of ClCG10G001060 vs. TrEMBL
Match: A0A0A0L1Q1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G005570 PE=4 SV=1) HSP 1 Score: 616.3 bits (1588), Expect = 2.3e-173 Identity = 313/358 (87.43%), Postives = 331/358 (92.46%), Query Frame = 1
BLAST of ClCG10G001060 vs. TrEMBL
Match: A0A067L5J4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02765 PE=4 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 1.1e-130 Identity = 237/359 (66.02%), Postives = 276/359 (76.88%), Query Frame = 1
BLAST of ClCG10G001060 vs. TrEMBL
Match: M5W9S6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007844mg PE=4 SV=1) HSP 1 Score: 465.3 bits (1196), Expect = 6.6e-128 Identity = 242/357 (67.79%), Postives = 280/357 (78.43%), Query Frame = 1
BLAST of ClCG10G001060 vs. TrEMBL
Match: B9S1M0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0866500 PE=4 SV=1) HSP 1 Score: 456.8 bits (1174), Expect = 2.4e-125 Identity = 233/363 (64.19%), Postives = 273/363 (75.21%), Query Frame = 1
BLAST of ClCG10G001060 vs. TrEMBL
Match: A0A068V2Z0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00042439001 PE=4 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 2.0e-124 Identity = 229/362 (63.26%), Postives = 275/362 (75.97%), Query Frame = 1
BLAST of ClCG10G001060 vs. TAIR10
Match: AT5G45410.1 (AT5G45410.1 unknown protein) HSP 1 Score: 393.3 bits (1009), Expect = 1.6e-109 Identity = 203/314 (64.65%), Postives = 234/314 (74.52%), Query Frame = 1
BLAST of ClCG10G001060 vs. TAIR10
Match: AT4G25030.1 (AT4G25030.1 unknown protein) HSP 1 Score: 374.8 bits (961), Expect = 5.9e-104 Identity = 196/316 (62.03%), Postives = 229/316 (72.47%), Query Frame = 1
BLAST of ClCG10G001060 vs. NCBI nr
Match: gi|659095464|ref|XP_008448595.1| (PREDICTED: uncharacterized protein LOC103490724 [Cucumis melo]) HSP 1 Score: 628.6 bits (1620), Expect = 6.5e-177 Identity = 317/358 (88.55%), Postives = 333/358 (93.02%), Query Frame = 1
BLAST of ClCG10G001060 vs. NCBI nr
Match: gi|449456773|ref|XP_004146123.1| (PREDICTED: uncharacterized protein LOC101211606 [Cucumis sativus]) HSP 1 Score: 616.3 bits (1588), Expect = 3.3e-173 Identity = 313/358 (87.43%), Postives = 331/358 (92.46%), Query Frame = 1
BLAST of ClCG10G001060 vs. NCBI nr
Match: gi|802585560|ref|XP_012070494.1| (PREDICTED: uncharacterized protein LOC105632664 isoform X1 [Jatropha curcas]) HSP 1 Score: 474.6 bits (1220), Expect = 1.6e-130 Identity = 237/359 (66.02%), Postives = 276/359 (76.88%), Query Frame = 1
BLAST of ClCG10G001060 vs. NCBI nr
Match: gi|470128425|ref|XP_004300142.1| (PREDICTED: uncharacterized protein LOC101302456 [Fragaria vesca subsp. vesca]) HSP 1 Score: 469.5 bits (1207), Expect = 5.0e-129 Identity = 239/357 (66.95%), Postives = 282/357 (78.99%), Query Frame = 1
BLAST of ClCG10G001060 vs. NCBI nr
Match: gi|645265320|ref|XP_008238096.1| (PREDICTED: uncharacterized protein LOC103336778 [Prunus mume]) HSP 1 Score: 467.2 bits (1201), Expect = 2.5e-128 Identity = 243/357 (68.07%), Postives = 280/357 (78.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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