ClCG10G000440 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTCTTCTTCTTCTTCCATTTTTCTCTGTTTTTCCCTCATTACAATGCTGGGTTTAGCCCCTCACTTCTGTCTTCCCACCATTTTTCCCGGATCCGCCATAGCCATGGATCACTCCTCTGCTTCTCGCCCCTCCTCTTCCCTTCACTTCTCTCTTCTCCGATCGTGTCCCAATGCGTTTCGCTCTCGCCGTCCCAAGTCGATCGTCATTTCTTGCCACTCTTCTCGTGATAGATCCACCCACAGTGATGATGATTCCCATCAGGATTATTTCGAGGCTTCGTTTCTTGTTTCAGGTTCTTGGTTTTAATTTTTGGGTTTCTTTTTTAGGGCTTTGATGATTGTTATAATCGCTGATCAAATCGATTCGGGTTTGTGGGTGTTTCTGATTCTTGTATTTGTTTGGTTTTTTCTGACTATTAGAGACTATCTATCACTATCGAATGTGGAAGAAGAGGTTTCAAGAGGACACGAGTTTCAACCAGAAAGAATCGCGTGTCAATTCTCATTCACTTGGACTGGGGTTTTTTAGACGTTTTCGAAGCCCCACTGTGTTTCTCAAAATTTCTTGCAATGGAGACTTTCTACTGCCAATTGTCGTAGGTATATTGGATGATAACTTTGTCGTGATTGGGATTGTGTTTTCTTATGAATTTTGTTGAAAAGACGCTGTATATTTTGGACTTGGTCTGCAGGGGAATATGCTATTGAGAAACTTATTGATTGTCAGCTTGGGATTGAAAATGGGGTTGGTTTTCTTTGGCTTTGTTATTCATATTTTTGGCTTCTCATACTTTATTGTTGGTATTGATTGCCAAACGATCGTGTTACAGGAGGCCCCGGATCTCTTTCAGTTTATACAAGACCTAATTGTGAAAGTTGGTTATGAGGTATGGAACTACCTTCTAACTTAGCCAATAAATACATGTTCAACCTTTATTATTATTTCTGAGTTCAACAATGTGGGGGATCGAACTTACCAGTGCCCTATCCATTGAGTTATGCTCAAATTGGCCTAGATTTTATAATTGGTTCAGTATTCTCTTGGAGAGAGTTCGTGGCATGAATGTGAAGGATGCTAGGATGGAGTTTTCAGCTTTTGATTATGCACTTGCTTGAAATGTAAATTGTTGCTTCCTACTATTATGCATGGAAGAACCAAGAAATATATACATGAACTTTTTAATTTTTTCTATACAAGAACCAAGAGGCGGAAAAAATCTGCTAGTTTTGTTTGAAACTCAATGTACCTGATGAGACAAGGTTATGCTCAAGAATATTAGCCTCTTTGTCTCTTATATTTCAAAGTGTTGTATAATTCGAGACATAATTCTTCATCTTTTTTATTGTTAATAAATTATTTGCTGTAAGCTAGATTATGGGTGGTCAGTGATTAGTGATGATTAGAATTCGTTCCTTCCTTGATTTGTTTCTTTAATGTAATTGAGTAGTAAATCTAGAAGCTTGCACGGCTTCTGAATAAATAATTTGTACTTCTATTGTACTTCTTTTTTTTCTGCTAACTACGAAAAAATTATGTTGTTACGAGCATAGGCTACCACAGCGAGAATTACTGAAAGAGTGGTGAACACTTACTTTGCGCGGCTCTTCTTGAGAAAGGTTAGCTCTTACAAATTCAGTCACAATTAGCCTATACATTTTTAGAAGTTTTCAATACATGTCATTTTTTTTTCCGTCTCACAGCTATTTTCATCTGCAGGAAGGGGAAAATGAGATGTTAAGTGTGGATGCACGCCCCTCAGACGCCCTAAATATTGCATATCGGTGTAAGGTAGATATTCTATCATTAACTGCCGAGATCATTGCAGAACTTATGCAAGTTGCTGGAATGACTTAGTTTCGTTTAAAATGAAGTAAAGTAGTATATATGCTAATTTGGTGGATGCTTTACTTTGCACCCTCTCACCCCCTTTCATGACAGATAATAATTTCTTACTTATACTGAAACTTTGTGGTCACGCCATTTTTCTGTTTAATGAATGTGCAGATACCAGTACTTGTTAGTAAGCAGATTGTCTATGAGGATGCGATAAGAGTTAGTTACGGGTTTGGAAGATTGCACGAGAGGAAGTCATGTTTTGATGTTTTACTTGACTGGTATAAGTGCAAGCACCGTTGGCTTATTTGATAGACATCTTTTCTTGATATCTAAAAATGATAATTTCTTGTTCAGTGCTGCAGATGGCCCAGATTTCTTGTCCGAGGAACTCGATATGCTGAAGAATATGAAAATCGCTATTTATGAAGAACGGTACAAAGATGCAGGTATAAGTAGGGAGGGCTAAGTGCTAACCAATTTATTTTTATTGCAACAATGTCTATCTAGACGTTTTGTTTCTGATCATTTTCATGCAAACGAGGGTATTTATTATTGATAATTGTTCCCTTCAGCCATGTGGAGGGATAAGTTAACAAAGCTTCGAAAGTCGGTACATGAGGCGTAACTTCGATATTCAAACTGCATTTATCTGCACTAGGACTTGTTGTTCCTGTAAGTAACTCTCTGTAATTGACTGCTGTACGGGGAGAGGTACCATACAACTAAACGTGTTTGAATTTTTCTGATACTACACCCTAACAGGGCGACTCTTTTGTTGGGTAGGAATTGTTCGCTCGCAGGCATGTCTTTGAACATTCAATTCAGCATTGGATGGATTAACACTGAGTGGACTGTTACGCATCATTGCAGAAAATTATCCATAGTGATGGTGTCGGTCTGTACAGTTACAGTTAAGAGTATGTAAATATTACATTTGGGTAGTCAATGTGTTGTATCTCTAAGATATGAATGAGATGGCTGATATTTTTTTCAGCTTTAAGTTTGCAGAGAATGCTAACATGAAAAGGAAGCTTTTTGTATATTCCAACAAAGTCTCATTCCTCTCACATACACTCTTCTTTGATCCTTTTGTTGTTACGAACAAAGCGAG TCTTCTTCTTCTTCTTCCATTTTTCTCTGTTTTTCCCTCATTACAATGCTGGGTTTAGCCCCTCACTTCTGTCTTCCCACCATTTTTCCCGGATCCGCCATAGCCATGGATCACTCCTCTGCTTCTCGCCCCTCCTCTTCCCTTCACTTCTCTCTTCTCCGATCGTGTCCCAATGCGTTTCGCTCTCGCCGTCCCAAGTCGATCGTCATTTCTTGCCACTCTTCTCGTGATAGATCCACCCACAGTGATGATGATTCCCATCAGGATTATTTCGAGGCTTCGTTTCTTGTTTCAGAGACTATCTATCACTATCGAATGTGGAAGAAGAGGTTTCAAGAGGACACGAGTTTCAACCAGAAAGAATCGCGTGTCAATTCTCATTCACTTGGACTGGGGTTTTTTAGACGTTTTCGAAGCCCCACTGTGTTTCTCAAAATTTCTTGCAATGGAGACTTTCTACTGCCAATTGTCGTAGGGGAATATGCTATTGAGAAACTTATTGATTGTCAGCTTGGGATTGAAAATGGGGAGGCCCCGGATCTCTTTCAGTTTATACAAGACCTAATTGTGAAAGTTGGTTATGAGGCTACCACAGCGAGAATTACTGAAAGAGTGGTGAACACTTACTTTGCGCGGCTCTTCTTGAGAAAGGAAGGGGAAAATGAGATGTTAAGTGTGGATGCACGCCCCTCAGACGCCCTAAATATTGCATATCGGTGTAAGGTAGATATTCTATCATTAACTGCCGAGATCATTGCAGAACTTATGCAAATACCAGTACTTGTTAGTAAGCAGATTGTCTATGAGGATGCGATAAGAGTTAGTTACGGGTTTGGAAGATTGCACGAGAGGAAGTCATGTTTTGATGTTTTACTTGACTGTGCTGCAGATGGCCCAGATTTCTTGTCCGAGGAACTCGATATGCTGAAGAATATGAAAATCGCTATTTATGAAGAACGGTACAAAGATGCAGCCATGTGGAGGGATAAGTTAACAAAGCTTCGAAAGTCGGTACATGAGGCGTAACTTCGATATTCAAACTGCATTTATCTGCACTAGGACTTGTTGTTCCTGGCGACTCTTTTGTTGGGTAGGAATTGTTCGCTCGCAGGCATGTCTTTGAACATTCAATTCAGCATTGGATGGATTAACACTGAGTGGACTGTTACGCATCATTGCAGAAAATTATCCATAGTGATGGTGTCGGTCTGTACAGTTACAGTTAAGAGTATGTAAATATTACATTTGGGTAGTCAATGTGTTGTATCTCTAAGATATGAATGAGATGGCTGATATTTTTTTCAGCTTTAAGTTTGCAGAGAATGCTAACATGAAAAGGAAGCTTTTTGTATATTCCAACAAAGTCTCATTCCTCTCACATACACTCTTCTTTGATCCTTTTGTTGTTACGAACAAAGCGAG ATGCTGGGTTTAGCCCCTCACTTCTGTCTTCCCACCATTTTTCCCGGATCCGCCATAGCCATGGATCACTCCTCTGCTTCTCGCCCCTCCTCTTCCCTTCACTTCTCTCTTCTCCGATCGTGTCCCAATGCGTTTCGCTCTCGCCGTCCCAAGTCGATCGTCATTTCTTGCCACTCTTCTCGTGATAGATCCACCCACAGTGATGATGATTCCCATCAGGATTATTTCGAGGCTTCGTTTCTTGTTTCAGAGACTATCTATCACTATCGAATGTGGAAGAAGAGGTTTCAAGAGGACACGAGTTTCAACCAGAAAGAATCGCGTGTCAATTCTCATTCACTTGGACTGGGGTTTTTTAGACGTTTTCGAAGCCCCACTGTGTTTCTCAAAATTTCTTGCAATGGAGACTTTCTACTGCCAATTGTCGTAGGGGAATATGCTATTGAGAAACTTATTGATTGTCAGCTTGGGATTGAAAATGGGGAGGCCCCGGATCTCTTTCAGTTTATACAAGACCTAATTGTGAAAGTTGGTTATGAGGCTACCACAGCGAGAATTACTGAAAGAGTGGTGAACACTTACTTTGCGCGGCTCTTCTTGAGAAAGGAAGGGGAAAATGAGATGTTAAGTGTGGATGCACGCCCCTCAGACGCCCTAAATATTGCATATCGGTGTAAGGTAGATATTCTATCATTAACTGCCGAGATCATTGCAGAACTTATGCAAATACCAGTACTTGTTAGTAAGCAGATTGTCTATGAGGATGCGATAAGAGTTAGTTACGGGTTTGGAAGATTGCACGAGAGGAAGTCATGTTTTGATGTTTTACTTGACTGTGCTGCAGATGGCCCAGATTTCTTGTCCGAGGAACTCGATATGCTGAAGAATATGAAAATCGCTATTTATGAAGAACGGTACAAAGATGCAGCCATGTGGAGGGATAAGTTAACAAAGCTTCGAAAGTCGGTACATGAGGCGTAA MLGLAPHFCLPTIFPGSAIAMDHSSASRPSSSLHFSLLRSCPNAFRSRRPKSIVISCHSSRDRSTHSDDDSHQDYFEASFLVSETIYHYRMWKKRFQEDTSFNQKESRVNSHSLGLGFFRRFRSPTVFLKISCNGDFLLPIVVGEYAIEKLIDCQLGIENGEAPDLFQFIQDLIVKVGYEATTARITERVVNTYFARLFLRKEGENEMLSVDARPSDALNIAYRCKVDILSLTAEIIAELMQIPVLVSKQIVYEDAIRVSYGFGRLHERKSCFDVLLDCAADGPDFLSEELDMLKNMKIAIYEERYKDAAMWRDKLTKLRKSVHEA
BLAST of ClCG10G000440 vs. Swiss-Prot
Match: BBD2_ARATH (Bifunctional nuclease 2 OS=Arabidopsis thaliana GN=BBD2 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 3.3e-26 Identity = 99/319 (31.03%), Postives = 151/319 (47.34%), Query Frame = 1
BLAST of ClCG10G000440 vs. Swiss-Prot
Match: BBD2_ORYSJ (Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica GN=BBD2 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.1e-24 Identity = 78/217 (35.94%), Postives = 108/217 (49.77%), Query Frame = 1
BLAST of ClCG10G000440 vs. Swiss-Prot
Match: BBD1_ARATH (Bifunctional nuclease 1 OS=Arabidopsis thaliana GN=BBD1 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.6e-23 Identity = 72/201 (35.82%), Postives = 104/201 (51.74%), Query Frame = 1
BLAST of ClCG10G000440 vs. Swiss-Prot
Match: BBD1_ORYSI (Bifunctional nuclease 1 OS=Oryza sativa subsp. indica GN=BBD1 PE=3 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 8.4e-22 Identity = 70/202 (34.65%), Postives = 106/202 (52.48%), Query Frame = 1
BLAST of ClCG10G000440 vs. Swiss-Prot
Match: BBD1_ORYSJ (Bifunctional nuclease 1 OS=Oryza sativa subsp. japonica GN=BBD1 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.1e-21 Identity = 68/197 (34.52%), Postives = 103/197 (52.28%), Query Frame = 1
BLAST of ClCG10G000440 vs. TrEMBL
Match: A0A0A0L3L8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002490 PE=4 SV=1) HSP 1 Score: 575.9 bits (1483), Expect = 3.2e-161 Identity = 293/328 (89.33%), Postives = 301/328 (91.77%), Query Frame = 1
BLAST of ClCG10G000440 vs. TrEMBL
Match: M5VR09_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008623mg PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 1.4e-79 Identity = 164/314 (52.23%), Postives = 214/314 (68.15%), Query Frame = 1
BLAST of ClCG10G000440 vs. TrEMBL
Match: W9SMU0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026609 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 4.0e-79 Identity = 170/359 (47.35%), Postives = 228/359 (63.51%), Query Frame = 1
BLAST of ClCG10G000440 vs. TrEMBL
Match: A0A0R0LIR7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G161700 PE=4 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 1.5e-78 Identity = 162/334 (48.50%), Postives = 224/334 (67.07%), Query Frame = 1
BLAST of ClCG10G000440 vs. TrEMBL
Match: B9SXC6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0783240 PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 3.4e-78 Identity = 156/299 (52.17%), Postives = 209/299 (69.90%), Query Frame = 1
BLAST of ClCG10G000440 vs. TAIR10
Match: AT5G66050.1 (AT5G66050.1 Wound-responsive family protein) HSP 1 Score: 237.7 bits (605), Expect = 1.0e-62 Identity = 142/327 (43.43%), Postives = 189/327 (57.80%), Query Frame = 1
BLAST of ClCG10G000440 vs. TAIR10
Match: AT1G19660.1 (AT1G19660.1 Wound-responsive family protein) HSP 1 Score: 120.6 bits (301), Expect = 1.9e-27 Identity = 99/319 (31.03%), Postives = 151/319 (47.34%), Query Frame = 1
BLAST of ClCG10G000440 vs. TAIR10
Match: AT1G75380.1 (AT1G75380.1 bifunctional nuclease in basal defense response 1) HSP 1 Score: 110.9 bits (276), Expect = 1.5e-24 Identity = 72/201 (35.82%), Postives = 104/201 (51.74%), Query Frame = 1
BLAST of ClCG10G000440 vs. NCBI nr
Match: gi|778674674|ref|XP_011650273.1| (PREDICTED: bifunctional nuclease 2 [Cucumis sativus]) HSP 1 Score: 575.9 bits (1483), Expect = 4.6e-161 Identity = 293/328 (89.33%), Postives = 301/328 (91.77%), Query Frame = 1
BLAST of ClCG10G000440 vs. NCBI nr
Match: gi|659095305|ref|XP_008448511.1| (PREDICTED: bifunctional nuclease 2 isoform X1 [Cucumis melo]) HSP 1 Score: 566.2 bits (1458), Expect = 3.6e-158 Identity = 291/328 (88.72%), Postives = 299/328 (91.16%), Query Frame = 1
BLAST of ClCG10G000440 vs. NCBI nr
Match: gi|659095309|ref|XP_008448513.1| (PREDICTED: bifunctional nuclease 2 isoform X2 [Cucumis melo]) HSP 1 Score: 411.8 bits (1057), Expect = 1.1e-111 Identity = 209/228 (91.67%), Postives = 215/228 (94.30%), Query Frame = 1
BLAST of ClCG10G000440 vs. NCBI nr
Match: gi|1009177519|ref|XP_015870017.1| (PREDICTED: bifunctional nuclease 2-like [Ziziphus jujuba]) HSP 1 Score: 308.1 bits (788), Expect = 1.8e-80 Identity = 170/335 (50.75%), Postives = 220/335 (65.67%), Query Frame = 1
BLAST of ClCG10G000440 vs. NCBI nr
Match: gi|645273696|ref|XP_008242000.1| (PREDICTED: bifunctional nuclease 2 isoform X1 [Prunus mume]) HSP 1 Score: 305.8 bits (782), Expect = 8.8e-80 Identity = 167/326 (51.23%), Postives = 216/326 (66.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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