ClCG09G018590 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGACTCAGGAGCATCATTATCCTCTTGGCAGCAGCTTTGGTGGTTGCAAGTGCCTTGGACAACCAAGGGCGGCAGCAGCGGTGTCGGCAAATGAGGGCCCAGGAGGAGATCGGGAGCTGCCAAGAGTACCTGAGGCAGCAAAGCAGGTACGTTTTGGAGATGCGTGGAATCGAAAACCAAAGGAGGAGAGGAGGAGAGTTGTTCAATGAGTGTTGCCATGAGCTTAGGAATGTGGATGAAGAGTGTAGGTGTGAACTGTTGGAGGAGATTGCTGGGATGGAGAGGAGGAAAGGAGGAGGGCTAGAAGAAAGGCAGATGTTTGAGAGAGCTAGAAACTTGCCATCCATGTGTGGGATCCGCCCACAGCAATGCTACTTCTAA ATGGCAAGACTCAGGAGCATCATTATCCTCTTGGCAGCAGCTTTGGTGGTTGCAAGTGCCTTGGACAACCAAGGGCGGCAGCAGCGGTGTCGGCAAATGAGGGCCCAGGAGGAGATCGGGAGCTGCCAAGAGTACCTGAGGCAGCAAAGCAGGTACGTTTTGGAGATGCGTGGAATCGAAAACCAAAGGAGGAGAGGAGGAGAGTTGTTCAATGAGTGTTGCCATGAGCTTAGGAATGTGGATGAAGAGTGTAGGTGTGAACTGTTGGAGGAGATTGCTGGGATGGAGAGGAGGAAAGGAGGAGGGCTAGAAGAAAGGCAGATGTTTGAGAGAGCTAGAAACTTGCCATCCATGTGTGGGATCCGCCCACAGCAATGCTACTTCTAA ATGGCAAGACTCAGGAGCATCATTATCCTCTTGGCAGCAGCTTTGGTGGTTGCAAGTGCCTTGGACAACCAAGGGCGGCAGCAGCGGTGTCGGCAAATGAGGGCCCAGGAGGAGATCGGGAGCTGCCAAGAGTACCTGAGGCAGCAAAGCAGGTACGTTTTGGAGATGCGTGGAATCGAAAACCAAAGGAGGAGAGGAGGAGAGTTGTTCAATGAGTGTTGCCATGAGCTTAGGAATGTGGATGAAGAGTGTAGGTGTGAACTGTTGGAGGAGATTGCTGGGATGGAGAGGAGGAAAGGAGGAGGGCTAGAAGAAAGGCAGATGTTTGAGAGAGCTAGAAACTTGCCATCCATGTGTGGGATCCGCCCACAGCAATGCTACTTCTAA MARLRSIIILLAAALVVASALDNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELLEEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF
BLAST of ClCG09G018590 vs. Swiss-Prot
Match: 2SS_CUCMA (2S albumin OS=Cucurbita maxima PE=1 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 7.1e-41 Identity = 86/141 (60.99%), Postives = 103/141 (73.05%), Query Frame = 1
BLAST of ClCG09G018590 vs. Swiss-Prot
Match: 2SS_RICCO (2S albumin OS=Ricinus communis PE=1 SV=2) HSP 1 Score: 68.9 bits (167), Expect = 4.5e-11 Identity = 37/103 (35.92%), Postives = 61/103 (59.22%), Query Frame = 1
HSP 2 Score: 67.4 bits (163), Expect = 1.3e-10 Identity = 37/105 (35.24%), Postives = 54/105 (51.43%), Query Frame = 1
BLAST of ClCG09G018590 vs. Swiss-Prot
Match: 2SS5_HELAN (2S seed storage protein OS=Helianthus annuus GN=HAG5 PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 4.5e-11 Identity = 39/117 (33.33%), Postives = 60/117 (51.28%), Query Frame = 1
HSP 2 Score: 49.7 bits (117), Expect = 2.8e-05 Identity = 32/148 (21.62%), Postives = 77/148 (52.03%), Query Frame = 1
BLAST of ClCG09G018590 vs. Swiss-Prot
Match: 2SS1_BEREX (2S sulfur-rich seed storage protein 1 OS=Bertholletia excelsa GN=BE2S1 PE=1 SV=2) HSP 1 Score: 67.8 bits (164), Expect = 1.0e-10 Identity = 46/138 (33.33%), Postives = 66/138 (47.83%), Query Frame = 1
BLAST of ClCG09G018590 vs. Swiss-Prot
Match: 2SS2_BEREX (2S sulfur-rich seed storage protein 2 OS=Bertholletia excelsa GN=BE2S2 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.8e-10 Identity = 40/106 (37.74%), Postives = 59/106 (55.66%), Query Frame = 1
BLAST of ClCG09G018590 vs. TrEMBL
Match: A0A0A0L7Q2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G080340 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 6.2e-44 Identity = 92/139 (66.19%), Postives = 108/139 (77.70%), Query Frame = 1
BLAST of ClCG09G018590 vs. TrEMBL
Match: A0A0U1Z284_TRIKI (Alpha-amylase inhibitor OS=Trichosanthes kirilowii GN=AAI PE=2 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.3e-38 Identity = 85/141 (60.28%), Postives = 103/141 (73.05%), Query Frame = 1
BLAST of ClCG09G018590 vs. TrEMBL
Match: Q8L694_MOMCH (Napin OS=Momordica charantia GN=napin PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 4.5e-26 Identity = 63/141 (44.68%), Postives = 91/141 (64.54%), Query Frame = 1
BLAST of ClCG09G018590 vs. TrEMBL
Match: A0A0M5WZ27_MOMCH (AdMc1 protein OS=Momordica charantia GN=adMc1 PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 7.1e-24 Identity = 67/141 (47.52%), Postives = 89/141 (63.12%), Query Frame = 1
BLAST of ClCG09G018590 vs. TrEMBL
Match: Q8VX62_SESIN (Precursor of thiamin-binding protein OS=Sesamum indicum PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.1e-16 Identity = 53/129 (41.09%), Postives = 78/129 (60.47%), Query Frame = 1
BLAST of ClCG09G018590 vs. TAIR10
Match: AT4G27140.1 (AT4G27140.1 seed storage albumin 1) HSP 1 Score: 50.8 bits (120), Expect = 7.1e-07 Identity = 28/106 (26.42%), Postives = 60/106 (56.60%), Query Frame = 1
BLAST of ClCG09G018590 vs. TAIR10
Match: AT4G27160.1 (AT4G27160.1 seed storage albumin 3) HSP 1 Score: 48.5 bits (114), Expect = 3.5e-06 Identity = 28/107 (26.17%), Postives = 55/107 (51.40%), Query Frame = 1
BLAST of ClCG09G018590 vs. TAIR10
Match: AT5G54740.1 (AT5G54740.1 seed storage albumin 5) HSP 1 Score: 47.4 bits (111), Expect = 7.8e-06 Identity = 37/141 (26.24%), Postives = 68/141 (48.23%), Query Frame = 1
BLAST of ClCG09G018590 vs. NCBI nr
Match: gi|778676144|ref|XP_011650534.1| (PREDICTED: 2S albumin-like [Cucumis sativus]) HSP 1 Score: 184.9 bits (468), Expect = 8.9e-44 Identity = 92/139 (66.19%), Postives = 108/139 (77.70%), Query Frame = 1
BLAST of ClCG09G018590 vs. NCBI nr
Match: gi|68564970|sp|Q39649.1|2SS_CUCMA (RecName: Full=2S albumin; Contains: RecName: Full=2S albumin small chain; Contains: RecName: Full=2S albumin large chain; Flags: Precursor [Cucurbita maxima]) HSP 1 Score: 167.9 bits (424), Expect = 1.1e-38 Identity = 86/141 (60.99%), Postives = 104/141 (73.76%), Query Frame = 1
BLAST of ClCG09G018590 vs. NCBI nr
Match: gi|758343810|gb|AJO68010.1| (alpha-amylase inhibitor [Trichosanthes kirilowii]) HSP 1 Score: 167.2 bits (422), Expect = 1.9e-38 Identity = 85/141 (60.28%), Postives = 103/141 (73.05%), Query Frame = 1
BLAST of ClCG09G018590 vs. NCBI nr
Match: gi|21327881|emb|CAD32938.1| (napin [Momordica charantia]) HSP 1 Score: 125.6 bits (314), Expect = 6.4e-26 Identity = 63/141 (44.68%), Postives = 91/141 (64.54%), Query Frame = 1
BLAST of ClCG09G018590 vs. NCBI nr
Match: gi|930584849|emb|CDG50933.1| (AdMc1 protein [Momordica charantia]) HSP 1 Score: 118.2 bits (295), Expect = 1.0e-23 Identity = 67/141 (47.52%), Postives = 89/141 (63.12%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |