ClCG09G017850 (gene) Watermelon (Charleston Gray)

Overview
NameClCG09G017850
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionDnaJ-like zinc-finger protein
LocationCG_Chr09 : 34851913 .. 34853246 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAGCTCTGCCTCTAACAAAATCTTCCCATTTCAAGTCCTCAAATGGCCACCATATTATAATACAACTATAACTAAACCATCCATCATTTCTTTTGCTGCACCCACAGCCTCTTTGCTGCCCAAAAGTTGCCGCAACTGTGGAGGTAAAGGAGCCATTGATTGTCCTGGATGTAAGGTTAATTATCATCCTCCCTCCACTTCTTACTTCATTAATTCATATGTTGTTTATTCTAAATTAAAATTCATGATCATAAAAGGAAAACAAATGTGAATTGGTGATTCAATTTGGTGGGTTACTTATGAGATCAATCACATTGCTATTCCTTTCCTTTTTAAACGTATTCATCATTTTACCCCCTAAAACCATAACTTCATATTGTTTTTAAAGAATTTACTAAGGGAGCGTTTGGGGCATGCAACGAGTTGAGTTGAGTTGAGTTGAAGTTTAGAAAGTTGTGAGCTCTTATAGAGAGTGTTTGGCCCAAGGAATTGGAGTTGTGAAGTCCACTCTATGGAGTTCATGAGCCCCATGACTAATAAATATCAATTTTAGGCTTCATTAAAAGGGGCAATTGCAAATATAGTAGTAAGGCTTAAGATATTATCAGATATAGCACAATGCAAAAAAAGGAATTGAAAATATAGCAAAATTTAGATCCCACTCTTAGACTCTATTAGACTATCTCACTAATAGAAGTATATCATCGATAGAGTCTATCACTCCTACATTTTGCTATATTTGCAATTCTTTTAAAATATTGCTGTACAATTATTTATTAGCCTAAAAGTACTACCCATTACAATTACCTTTAGTAAAAATCTTACACTGTGGGCCTCATGATTTCATGACTCTTTCACAACTCCACTGTTTGCTCCACACACCCTCGTAAGGAGTTAATAAAATATAAAATTGATATCTTTAATTGCAAGACAAAGCCCATAAACTCTTTGGGTCAAACACTCCTTAATTATTTTAGGAAACTAAAAAGAGATTCTTTAACCATTTTCGAATACAAGATACCTATATATATATTCTATACTAATCATATTATGTGATTGTTTTTTAGGGCACGGGAAAGAACAAGAAAAACGGAAACATCTTCGAGCGTTGGAAGTAAGTACTCTCACTCGATATATTTTTTACTTGTTTTTTTTTTCTCTCTCTCTCTCCCTTTTAACATAAACTCAAAGGTAGCTTAATTGAATTCATCCATTCATTCTCTTAAAATTGTTTGTTTTAGATGTTTTGATTGTCAAGGATTTGGATTAAAGAGTTGTCCGGAATGTGGAAAAGGAGGACTCACCCCCGAACAAAGGGGAGAAAGATAA

mRNA sequence

ATGGGTAGCTCTGCCTCTAACAAAATCTTCCCATTTCAAGTCCTCAAATGGCCACCATATTATAATACAACTATAACTAAACCATCCATCATTTCTTTTGCTGCACCCACAGCCTCTTTGCTGCCCAAAAGTTGCCGCAACTGTGGAGGTAAAGGAGCCATTGATTGTCCTGGATGTAAGGGCACGGGAAAGAACAAGAAAAACGGAAACATCTTCGAGCGTTGGAAATGTTTTGATTGTCAAGGATTTGGATTAAAGAGTTGTCCGGAATGTGGAAAAGGAGGACTCACCCCCGAACAAAGGGGAGAAAGATAA

Coding sequence (CDS)

ATGGGTAGCTCTGCCTCTAACAAAATCTTCCCATTTCAAGTCCTCAAATGGCCACCATATTATAATACAACTATAACTAAACCATCCATCATTTCTTTTGCTGCACCCACAGCCTCTTTGCTGCCCAAAAGTTGCCGCAACTGTGGAGGTAAAGGAGCCATTGATTGTCCTGGATGTAAGGGCACGGGAAAGAACAAGAAAAACGGAAACATCTTCGAGCGTTGGAAATGTTTTGATTGTCAAGGATTTGGATTAAAGAGTTGTCCGGAATGTGGAAAAGGAGGACTCACCCCCGAACAAAGGGGAGAAAGATAA

Protein sequence

MGSSASNKIFPFQVLKWPPYYNTTITKPSIISFAAPTASLLPKSCRNCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFDCQGFGLKSCPECGKGGLTPEQRGER
Homology
[Close]
BLAST of ClCG09G017850 vs. TrEMBL
Match: A0A0A0LIM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G238860 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.3e-35
Identity = 72/103 (69.90%), Postives = 81/103 (78.64%), Query Frame = 1 

Query: 3   SSASNKIFPFQVLKWPPYYNTTITKPSIISFAA-PTASLLPKSCRNCGGKGAIDCPGCKG 62
           +S S  IFPF   +       +     I+ FAA PT++LLPK C+ CGGKGAIDCPGCKG
Sbjct: 4   TSTSINIFPFPSYQIFRSKRKSSPNDIIVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKG 63

Query: 63  TGKNKKNGNIFERWKCFDCQGFGLKSCPECGKGGLTPEQRGER 105
           TGKNKKNGNIFERWKCF+CQGFGLKSCP+CGKGGLTPEQRGER
Sbjct: 64  TGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQRGER 106

[Close]
BLAST of ClCG09G017850 vs. TrEMBL
Match: M0TUP0_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.4e-30
Identity = 59/76 (77.63%), Postives = 64/76 (84.21%), Query Frame = 1 

Query: 29  SIISFAAPTASLLPKSCRNCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFDCQGFGLKSC 88
           S   + A +   + K C+ CGGKGAI+CPGCKGTGKNKKNGNIFERWKCFDCQGFGLKSC
Sbjct: 30  SASKYGAVSVKPVSKGCQKCGGKGAIECPGCKGTGKNKKNGNIFERWKCFDCQGFGLKSC 89

Query: 89  PECGKGGLTPEQRGER 105
           P CGKGGLTPEQRGER
Sbjct: 90  PSCGKGGLTPEQRGER 105

[Close]
BLAST of ClCG09G017850 vs. TrEMBL
Match: A0A0B2NTM7_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_022241 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 5.4e-30
Identity = 61/80 (76.25%), Postives = 69/80 (86.25%), Query Frame = 1 

Query: 30  IISFAAPTA-----SLLPKSCRNCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFDCQGFG 89
           +I+FA+ +      + L KSC++CGGKGAI+CPGCKGTGKNKKNGNIFERWKCFDCQGFG
Sbjct: 29  VITFASKSGGGFSLNSLLKSCKSCGGKGAIECPGCKGTGKNKKNGNIFERWKCFDCQGFG 88

Query: 90  LKSCPECGKGGLTPEQRGER 105
           LKSCP CGK GLTPEQRGER
Sbjct: 89  LKSCPSCGKEGLTPEQRGER 108

[Close]
BLAST of ClCG09G017850 vs. TrEMBL
Match: I1KW91_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G239000 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 5.4e-30
Identity = 61/80 (76.25%), Postives = 69/80 (86.25%), Query Frame = 1 

Query: 30  IISFAAPTA-----SLLPKSCRNCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFDCQGFG 89
           +I+FA+ +      + L KSC++CGGKGAI+CPGCKGTGKNKKNGNIFERWKCFDCQGFG
Sbjct: 29  VITFASKSGGGFSLNSLLKSCKSCGGKGAIECPGCKGTGKNKKNGNIFERWKCFDCQGFG 88

Query: 90  LKSCPECGKGGLTPEQRGER 105
           LKSCP CGK GLTPEQRGER
Sbjct: 89  LKSCPSCGKEGLTPEQRGER 108

[Close]
BLAST of ClCG09G017850 vs. TrEMBL
Match: A0A0S3SEZ9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G271900 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 7.1e-30
Identity = 58/79 (73.42%), Postives = 70/79 (88.61%), Query Frame = 1 

Query: 27  KPSIISFAAPTASLLPKSCRNCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFDCQGFGLK 86
           + S++  A+ + + L KSC++CGGKGA++CPGCKGTGKNKKNGN+FERWKCFDCQGFGLK
Sbjct: 32  RTSVVVSASKSLNWLQKSCKSCGGKGAVECPGCKGTGKNKKNGNMFERWKCFDCQGFGLK 91

Query: 87  SCPECGKG-GLTPEQRGER 105
           +CP CGKG GLTPEQRGER
Sbjct: 92  TCPSCGKGRGLTPEQRGER 110

[Close]
BLAST of ClCG09G017850 vs. TAIR10
Match: AT1G22630.1 (AT1G22630.1 unknown protein)

HSP 1 Score: 135.2 bits (339), Expect = 2.3e-32
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 1 

Query: 43  KSCRNCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFDCQGFGLKSCPECGKGGLTPEQRG 102
           KSC  CG KGAI+CPGCKGTGKNKKNGN+FERWKCFDCQGFG+KSCP+CGKGGLTPEQRG
Sbjct: 49  KSCETCGAKGAIECPGCKGTGKNKKNGNMFERWKCFDCQGFGMKSCPKCGKGGLTPEQRG 108

Query: 103 ER 105
           ER
Sbjct: 109 ER 110

[Close]
BLAST of ClCG09G017850 vs. TAIR10
Match: AT2G34860.1 (AT2G34860.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein)

HSP 1 Score: 50.8 bits (120), Expect = 5.8e-07
Identity = 27/64 (42.19%), Postives = 33/64 (51.56%), Query Frame = 1 

Query: 44  SCRNCGGKGAIDCPGCKGTGK-----NKKNGNIFERWKCFDCQGFGLKSCPECGKGGLTP 103
           SCRNC G GA+ C  C GTGK      K+  +++E  +C +C G G   CP C   GL P
Sbjct: 101 SCRNCQGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGL-P 160

[Close]
BLAST of ClCG09G017850 vs. NCBI nr
Match: gi|659118711|ref|XP_008459263.1| (PREDICTED: uncharacterized protein LOC103498437 [Cucumis melo])

HSP 1 Score: 156.4 bits (394), Expect = 2.8e-35
Identity = 75/106 (70.75%), Postives = 85/106 (80.19%), Query Frame = 1 

Query: 3   SSASNKIFPF---QVLKWPPYYNTTITKPSIISFAA-PTASLLPKSCRNCGGKGAIDCPG 62
           +S S  IFPF   Q+++     +  IT P    FAA PT++LLPK C+ CGGKGAIDCPG
Sbjct: 6   TSTSINIFPFPSYQIVRSKTKSSPNITVP----FAALPTSNLLPKRCQKCGGKGAIDCPG 65

Query: 63  CKGTGKNKKNGNIFERWKCFDCQGFGLKSCPECGKGGLTPEQRGER 105
           CKGTGKNKKNGNIFERWKCF+CQGFGLKSCP+CGKGGLTPEQRGER
Sbjct: 66  CKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQRGER 107

[Close]
BLAST of ClCG09G017850 vs. NCBI nr
Match: gi|449470832|ref|XP_004153120.1| (PREDICTED: uncharacterized protein LOC101218183 [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 6.2e-35
Identity = 72/103 (69.90%), Postives = 81/103 (78.64%), Query Frame = 1 

Query: 3   SSASNKIFPFQVLKWPPYYNTTITKPSIISFAA-PTASLLPKSCRNCGGKGAIDCPGCKG 62
           +S S  IFPF   +       +     I+ FAA PT++LLPK C+ CGGKGAIDCPGCKG
Sbjct: 4   TSTSINIFPFPSYQIFRSKRKSSPNDIIVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKG 63

Query: 63  TGKNKKNGNIFERWKCFDCQGFGLKSCPECGKGGLTPEQRGER 105
           TGKNKKNGNIFERWKCF+CQGFGLKSCP+CGKGGLTPEQRGER
Sbjct: 64  TGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQRGER 106

[Close]
BLAST of ClCG09G017850 vs. NCBI nr
Match: gi|1000959546|ref|XP_015576413.1| (PREDICTED: uncharacterized protein LOC107261466 [Ricinus communis])

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-30
Identity = 63/92 (68.48%), Postives = 72/92 (78.26%), Query Frame = 1 

Query: 18  PPYYNTTITKPSIIS-FAAPTASL----LPKSCRNCGGKGAIDCPGCKGTGKNKKNGNIF 77
           P + N T TKP  +  FAA +       + K C+ CGGKGAI+CPGCKG+GKNKKNGNIF
Sbjct: 29  PTHKNCTETKPRTVRVFAAKSGGFSFNSILKGCKTCGGKGAIECPGCKGSGKNKKNGNIF 88

Query: 78  ERWKCFDCQGFGLKSCPECGKGGLTPEQRGER 105
           ERWKC+DCQGFGLKSCP CG+GGLTPEQRGER
Sbjct: 89  ERWKCYDCQGFGLKSCPNCGRGGLTPEQRGER 120

[Close]
BLAST of ClCG09G017850 vs. NCBI nr
Match: gi|695053769|ref|XP_009414992.1| (PREDICTED: uncharacterized protein LOC103995951 isoform X1 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 139.4 bits (350), Expect = 3.5e-30
Identity = 59/76 (77.63%), Postives = 64/76 (84.21%), Query Frame = 1 

Query: 29  SIISFAAPTASLLPKSCRNCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFDCQGFGLKSC 88
           S   + A +   + K C+ CGGKGAI+CPGCKGTGKNKKNGNIFERWKCFDCQGFGLKSC
Sbjct: 30  SASKYGAVSVKPVSKGCQKCGGKGAIECPGCKGTGKNKKNGNIFERWKCFDCQGFGLKSC 89

Query: 89  PECGKGGLTPEQRGER 105
           P CGKGGLTPEQRGER
Sbjct: 90  PSCGKGGLTPEQRGER 105

[Close]
BLAST of ClCG09G017850 vs. NCBI nr
Match: gi|734306138|gb|KHM98831.1| (hypothetical protein glysoja_022241 [Glycine soja])

HSP 1 Score: 138.3 bits (347), Expect = 7.8e-30
Identity = 61/80 (76.25%), Postives = 69/80 (86.25%), Query Frame = 1 

Query: 30  IISFAAPTA-----SLLPKSCRNCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFDCQGFG 89
           +I+FA+ +      + L KSC++CGGKGAI+CPGCKGTGKNKKNGNIFERWKCFDCQGFG
Sbjct: 29  VITFASKSGGGFSLNSLLKSCKSCGGKGAIECPGCKGTGKNKKNGNIFERWKCFDCQGFG 88

Query: 90  LKSCPECGKGGLTPEQRGER 105
           LKSCP CGK GLTPEQRGER
Sbjct: 89  LKSCPSCGKEGLTPEQRGER 108

The following BLAST results are available for this feature:
BLAST of ClCG09G017850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIM5_CUCSA4.3e-3569.90Uncharacterized protein OS=Cucumis sativus GN=Csa_2G238860 PE=4 SV=1[more]
M0TUP0_MUSAM2.4e-3077.63Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1[more]
A0A0B2NTM7_GLYSO5.4e-3076.25Uncharacterized protein OS=Glycine soja GN=glysoja_022241 PE=4 SV=1[more]
I1KW91_SOYBN5.4e-3076.25Uncharacterized protein OS=Glycine max GN=GLYMA_08G239000 PE=4 SV=1[more]
A0A0S3SEZ9_PHAAN7.1e-3073.42Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G271900 PE=... [more]
BLAST of ClCG09G017850 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G22630.12.3e-3288.71 unknown protein[more]
AT2G34860.15.8e-0742.19 DnaJ/Hsp40 cysteine-rich domain superfamily protein[more]
BLAST of ClCG09G017850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118711|ref|XP_008459263.1|2.8e-3570.75PREDICTED: uncharacterized protein LOC103498437 [Cucumis melo][more]
gi|449470832|ref|XP_004153120.1|6.2e-3569.90PREDICTED: uncharacterized protein LOC101218183 [Cucumis sativus][more]
gi|1000959546|ref|XP_015576413.1|1.6e-3068.48PREDICTED: uncharacterized protein LOC107261466 [Ricinus communis][more]
gi|695053769|ref|XP_009414992.1|3.5e-3077.63PREDICTED: uncharacterized protein LOC103995951 isoform X1 [Musa acuminata subsp... [more]
gi|734306138|gb|KHM98831.1|7.8e-3076.25hypothetical protein glysoja_022241 [Glycine soja][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G017850.1ClCG09G017850.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG09G017850Csa2G238860Cucumber (Chinese Long) v2cuwcgB091
ClCG09G017850MELO3C021951Melon (DHL92) v3.5.1mewcgB076
ClCG09G017850Cla97C09G179260Watermelon (97103) v2wcgwmbB035
ClCG09G017850Bhi10G001640Wax gourdwcgwgoB054
ClCG09G017850CSPI02G11940Wild cucumber (PI 183967)cpiwcgB097
ClCG09G017850Cucsa.109840Cucumber (Gy14) v1cgywcgB154
ClCG09G017850Lsi10G003410Bottle gourd (USVL1VR-Ls)lsiwcgB034
ClCG09G017850CsGy2G011980Cucumber (Gy14) v2cgybwcgB089
ClCG09G017850MELO3C021951.2Melon (DHL92) v3.6.1medwcgB074
ClCG09G017850CsaV3_2G014460Cucumber (Chinese Long) v3cucwcgB105
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG09G017850Watermelon (97103) v2wcgwmbB004
ClCG09G017850Wax gourdwcgwgoB041
ClCG09G017850Wax gourdwcgwgoB056
ClCG09G017850Watermelon (Charleston Gray)wcgwcgB013
ClCG09G017850Cucumber (Gy14) v1cgywcgB132
ClCG09G017850Cucurbita maxima (Rimu)cmawcgB081
ClCG09G017850Cucurbita maxima (Rimu)cmawcgB474
ClCG09G017850Cucurbita maxima (Rimu)cmawcgB510
ClCG09G017850Cucurbita moschata (Rifu)cmowcgB472
ClCG09G017850Cucurbita moschata (Rifu)cmowcgB507
ClCG09G017850Wild cucumber (PI 183967)cpiwcgB442
ClCG09G017850Cucumber (Chinese Long) v2cuwcgB420
ClCG09G017850Melon (DHL92) v3.5.1mewcgB506
ClCG09G017850Watermelon (97103) v1wcgwmB008
ClCG09G017850Watermelon (97103) v1wcgwmB033
ClCG09G017850Cucurbita pepo (Zucchini)cpewcgB246
ClCG09G017850Cucurbita pepo (Zucchini)cpewcgB626
ClCG09G017850Bottle gourd (USVL1VR-Ls)lsiwcgB075
ClCG09G017850Cucumber (Gy14) v2cgybwcgB390
ClCG09G017850Melon (DHL92) v3.6.1medwcgB500
ClCG09G017850Silver-seed gourdcarwcgB0769
ClCG09G017850Silver-seed gourdcarwcgB0865
ClCG09G017850Cucumber (Chinese Long) v3cucwcgB443