ClCG09G014950 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG09G014950
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Ty3-gypsy retrotransposon protein
Location	CG_Chr09 : 27963847 .. 27968728 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAATGGTGCAATTCTTCCAGATGTATCAAAATTGGAACCTCTGGATGAATCCAATTACTGTCGCTGGTCTTAGAAACTCCTATATTTTTCGAGCAACTAAAAATCGATTACATTCTCACCATCGATAGTTCTGATAAAGGTAAGATTACTAACAAAGGTAAGTCTACTATGGTAATTGATCTTGACAGCTCCAAAGTCACAGATATGTTAAAATTCAGTCAGTCAAAATCCGAACCTGTTGTAGATCCAGATAAATTTGAGAAAGATAACAAGACAATCTATGGCCATTTACTCAATCATATGACAAACTCATTATTCAATTTATTCATGGTTTAAAAGTCAGCAAAGGTGATATGAGACACTGTGGAGTCTAGGTATAGAAGAGATGATGTAGGCCATTAGAAGTATGTTGTTTAATAATGGTTGTAATTCCAAATGACAGACGAGAAACCAATTGTGGATCAAGTGGATAAATATGAGAATCTGGTGGTGAACGTTTTGTCTGAAGTTATGTAGATGTGCGAAATTCTCCAAGCAAATGTACTGCATGAAAAATTTCCACTGTCCTAGACTGATTACAGAAATCACCTGAACACAAGAAGAACGATTTGACATTGCAGTAATTGATCACTCACATGCACACGTAATAAGCAAATCGACAGAAAGATAAGCTTATCTCTAAAAATTTAAATTTCGTTAATGCTAACCTAGTTGAGTCTTTTGCTGTTAATAGAAAAAGGTTAAAAAATAATAGCAAGCAATCTGTCAAAAATGATTTTTATAAGAGGAAGGAACATCATAAAGTTACTGGTGGGGAGATGGAAAAGAAAAAATTGATATGCTATGTCTATGGAAAACAAGGACACAAATCCTACCAGTGTAACTAAAGGAAAGGAACGCCAGATCAACGACCGATCCGACAGGCCAATCTTGTTGAGCAAAATGACATCATTACTGCTGTGGTCATGGAATCCAACTTGGTAGAAAACAAATCAAATTGGATTCTCAACGCTAGAGCCTTAGATAGTATCTTCCACGACTTCCAAGATACTATCGATCATTAATGTGTGTTTATGGATAACTATGCTACTGTAGGAGTACTTAGGAAAGGGAACATTCTCTTAAAACTTACTTCTAGTAAAACATTATCATTAAGTGATGTGTTGTATGTACCTTTGTTATGTAGGAACTTGGTGTCTAGAAGTTTGTTGAACAAGGCTGGGCTTAAAATTGTACTAGAGGCTGACAAGGTTATTCTCACCAAAAATGGTAACTTTGTTCCTAAGGGGTACTTAGCTAATGGTCTTTTTGTTTTAAATTGTTGAGACTGGCGTGTCCCTAGGTCTCGTAGTTTTGTAAATTTGTAAATACATTGTATTTATCAATAAAATAAGAAGTTATTTTATTTATCTTTTGCATTAACTCAATTCAATAAACTAAGATTCCATGATTATTTTATGTAAACTTAAACATGTATGTGGTTGACATACGAGGAAGGATCATGTTTAAGTAATAACCAAAAGGTCTATAGTATAGGAATAAGGTTGGGTACCTTAATCTGGTAACACTATGGATATGGCTCACTTTATAATTGTTACAAAGAGTTGTAAATTGTTACAAATGATTTGATTCTAATCGTTCATGTGGAGATATATGAGTGGGGGTATCCTATGTAAAGAGTTTGTATAAGAGTAGAACGCGAAATGTTTAATTTTTCTTTGCAACGCTATTAATTGAAGAAATTAACATTTCATAGGATGACTATAGGTGACTCGACCTTAATCCGGAGTAAGTTGTGAACTCCTATCTATGAAGACAATTTTTTGATCTATATGGATGAGAGGTTCCGATCGCTGACTCAATATGACTACCATTTTAGGGATTTGTCTGATTAGGGAGCTAGGAACATATCTTCACAAGATGGAATTCACTCCTTCCCATGTTTAGAGTAAGTAGATAAATTACTCCCTTATGGGCTAATTCCGGGTCTTGAACAATGACGCCTCACCCTCTCATTGGCCCGAGAGGGGTTAGTTTATAGTTGGATTATAAACAGTTTGTTCATTAGAAGAAATAGTGGTACTTATGGAGTTAGATATAACTACAGGGTAAAACGGTAATTTGACCTAGTTGTAGTTATGAGTAATTTGTGAAGAGTCGGCTTATTGTTGATTAGTAAATTTCGTGGACACAGAAATATATCTATAGTGTGAAAAGTGCAACTGTAAGTCTTTGGTAGAATGACCTACAGTTAATAAATATTGATTGATCTAATTAAAGAGTTTGATTGATTAATCTCATATCATTGGAGCTTCTACTATAAATCCATAAGGTCCTCTTGCTAGCTCATAAAAGGATTAGTATTAGAATCAAACATTTTGGTTTACTTTGAAATGTTCAAATTAATAAGGGAATTAATTGTATGTGATAATATAAAGTTTATTTTGAATGAGATTCAAAATTTATACTTTATGTTATAAGAGAGACAAATATTTAAATAAGATTTAAATATTTATTATATGAATGAGATTCATATTAAAACTATAGGTTAAAATTAATATAAATGAGATTGATATTAAAAGTATAGATGATGTGAGAGAAGGTTATTTGAATATGATTCAAATTTAAGTTAAATATAAATAAATTAATAAATTAATTAATTTTTAATTAATTAATTTTATTTAATTCTATTTACTAAATATAATTTAATATATTATAATTAAATTAACATTAATTTTAATTAATAATACTATTATATTATTATTTAAAAATAACTCCCATGTAGTGTAGAGTTATTTTTTGTTCTCTCTCACATAGCAGTTTCACTTAAAAAGAAGAGGAAATTGGAGAAGGAGGTGTGACAAGTTTTTACAAAAGAGTTCTGTATTCCTCTCTCAAGTTCCTCTAAAAAATTCTCTTTTCCTCTTAAGAACAATTCTCTTACCAAAGAAATTGAGAGCCCACAACTCCATAGTTGATTCTTCCTACAAAATAGCAAGGAAGATTGTGTAGTGGTGTTCCAAAGAAGAAGAAGAATATCAAATTCTGGTTTGTGATTTGTAGAAGAAGAAGCGTTTCCCACATCAAAGACGGTCTTCAAAGGTAGGAAACTTCTATTCTTCTTAACCTTCTCAAAAGCATGCTAAAGTTTAGTTGTTTATCCAAGCATTTGTTCTCTGTAATTTAAGTTTCTCAAAACAAATTTAATGGCACATGGCGATCACTCGCTTCTGTTGAGGATTCAATTCCTTCATAAACATCATTAATGTTGCTTCTAAGATGAATGAAATTGCTTCCAGTTCTAATTGTATCTGTTGAATGAGAAATTTCGGCCAACCAAATTTCGCCATGTCATCGTGAGTCCAAATGCATCGTGGAATTTATAAATCAGAGTGGGTCGAGTAATTAAAGTTGCTCGGGTTAAAAGCCTAACCCAATTCAAGTCCATGGTGAATTATTTTTTTGGGCCAAAGAAGATATTGGGCCTAAACCCAATCCCAATTTTGGGGCCCAAAAGCAATTGGGCCCAAGCCCATGAAGGCCCATAGAAACTCTATAAATAGAGGCTTTATCTCTTCATTTAGGATGGATCCTTTTTGGAGAGTGAAGAAAAGTACTGAAGCTCTGGAAATCTGGATTCTGAAGAATTGAAGGCTGAAGCTCAAAATCTAAAGACTGAAGCTCCCAAGCTCACAAGCTCTGAAGATTGAAGCTCCCTGAAGCTCCAAAGAAGCTAAAGATTCAAAGATCCAAAGATTGAAGACTCTAGAGTTGAAGACCTTGAAAGAAAAGCTTCATAGAAGATCTCAAGAATTCAAGTCGCACGCGTTTACTTTTTGAGAGAAAGAATAAAAGGATCAAATATATTAGAGATTGTACTCATAACACTGAAATTAATACAAATATGAAGCTCAAGTTCCACGAATCAAATCTTCGGAAATCTCGTCGAACAAATTGGCACGCCCGGTGGGACAGTCTCTACCTTTCATCTCTTTCTCCCGTACAAGACATACAACATAACATCCAAAGACAATGCTTCTAACGCTTCAAGTAACACTTCCAGAAGACCGATTACTCGCAGCCGCTCTAAAGAAATACAGTCGGAAGAGCAACCTACCTTTGAGATCGCGAGAAATATATGGGAACGGATCTCAAGAGACCCGAAAGCTGGGGTCGTCATCAAAGAGAATCCTACACTTGACAAGCCTACCTCAGCTTCTGAACGACCAAGCGAGGAGGCATCCCAACCAAATGTAATGTCAGTCATGATGGCCGACGTGGGAACAAGTGAGGAGAGAATGGCTGAACTTGAAAAGAAAGTTAACATACTACTGAAGGCAGTTGAAGAAAGGGATTATGAGATTGCATCCCTCAAGAATCATATTGAAAGTCGTGATGCGGCTGAATCAAGTCATACACCTGCAGTCAAGAATAATGACAAAGGGAAGAAGGTTTTGCAAGATAGTCAACCCCAAGATTCAACTTCAATTGCTTCGTTGTCTGTCCAAAAGTTGCAGAAAATGATTGCGAACTCCATCAAGGCTCAATATGGAGGTCCCAGTCAAACCTCCCTCTTGTATTCCAAGCCGTATACGAAGAGGATTGACAACCTAAGGATGCCAAATAGGTATCAGCCGCCAAAATTCCAGCAGTTCGACGGAAAGGGCAACCCAAAGCAACATGTTGCTCACTTCATTGAAACCTGTGAAAACGCTGGAACTAGAGGAGACCTGCTAGTTAAACAGTTTGTTCGAACTCTGAAGGAAACGCCTTCGACTGGTACACGGACCTGGAGCCCGAAACTATCGATAGCTGGGAGCAGCTTGAGAGAGAATTCCTCAATCGTTTCTACAGTACTAGGCGCATCGTTAGTATGA

mRNA sequence

ATGAAGAATGGTGCAATTCTTCCAGATGTATCAAAATTGGAACCTCTGGATGAATCCAATTACTGTCGCTGTTCTGATAAAGGTAAGATTACTAACAAAGGTAAGTCTACTATGGTAATTGATCTTGACAGCTCCAAAGTCACAGATATGTTAAAATTCAGTCAGTCAAAATCCGAACCTGTTGACACAAATCCTACCAGTGTAACTAAAGGAAAGGAACGCCAGATCAACGACCGATCCGACAGGCCAATCTTGTTGAGCAAAATGACATCATTACTGCTGTGGTCATGGAATCCAACTTGGAACTTGGTGTCTAGAAGTTTGTTGAACAAGGCTGGGCTTAAAATTGTACTAGAGGCTGACAAGGTTATTCTCACCAAAAATGGTAACTTTGTTCCTAAGGGTGGTGTTCCAAAGAAGAAGAAGAATATCAAATTCTGGTTTGTGATTTGTAGAAGAAGAAGCGTTTCCCACATCAAAGACGGTCTTCAAAGCTCCAAAGAAGCTAAAGATTCAAAGATCCAAAGATTGAAGACTCTAGAGTTGAAGACCTTGAAAGAAAAGCTTCATAGAAGATCTCAAGAATTCAACTCAAGTTCCACGAATCAAATCTTCGGAAATCTCGTCGAACAAATTGGCACGCCCGGTGGGACAGTCTCTACCTTTCATCTCTTTCTCCCGTACAAGACATACAACATAACATCCAAAGACAATGCTTCTAACGCTTCAAGTAACACTTCCAGAAGACCGATTACTCGCAGCCGCTCTAAAGAAATACAGTCGGAAGAGCAACCTACCTTTGAGATCGCGAGAAATATATGGGAACGGATCTCAAGAGACCCGAAAGCTGGGGTCGTCATCAAAGAGAATCCTACACTTGACAAGCCTACCTCAGCTTCTGAACGACCAAGCGAGGAGGCATCCCAACCAAATGTAATGTCAGTCATGATGGCCGACGTGGGAACAAGTGAGGAGAGAATGGCTGAACTTGAAAAGAAAGTTAACATACTACTGAAGGCAGTTGAAGAAAGGGATTATGAGATTGCATCCCTCAAGAATCATATTGAAAGTCGTGATGCGGCTGAATCAAGTCATACACCTGCAGTCAAGAATAATGACAAAGGGAAGAAGGTTTTGCAAGATAGTCAACCCCAAGATTCAACTTCAATTGCTTCGTTGTCTGTCCAAAAGTTGCAGAAAATGATTGCGAACTCCATCAAGGCTCAATATGGAGGTCCCAGTCAAACCTCCCTCTTGTATTCCAAGCCGTATACGAAGAGGATTGACAACCTAAGGATGCCAAATAGGTATCAGCCGCCAAAATTCCAGCAGTTCGACGGAAAGGGCAACCCAAAGCAACATGTTGCTCACTTCATTGAAACCTGTGAAAACGCTGGAACTAGAGGAGACCTGCTAGTTAAACAGTTTGTTCGAACTCTGAAGGAAACGCCTTCGACTGGTACACGGACCTGGAGCCCGAAACTATCGATAGCTGGGAGCAGCTTGAGAGAGAATTCCTCAATCGTTTCTACAGTACTAGGCGCATCGTTAGTATGA

Coding sequence (CDS)

ATGAAGAATGGTGCAATTCTTCCAGATGTATCAAAATTGGAACCTCTGGATGAATCCAATTACTGTCGCTGTTCTGATAAAGGTAAGATTACTAACAAAGGTAAGTCTACTATGGTAATTGATCTTGACAGCTCCAAAGTCACAGATATGTTAAAATTCAGTCAGTCAAAATCCGAACCTGTTGACACAAATCCTACCAGTGTAACTAAAGGAAAGGAACGCCAGATCAACGACCGATCCGACAGGCCAATCTTGTTGAGCAAAATGACATCATTACTGCTGTGGTCATGGAATCCAACTTGGAACTTGGTGTCTAGAAGTTTGTTGAACAAGGCTGGGCTTAAAATTGTACTAGAGGCTGACAAGGTTATTCTCACCAAAAATGGTAACTTTGTTCCTAAGGGTGGTGTTCCAAAGAAGAAGAAGAATATCAAATTCTGGTTTGTGATTTGTAGAAGAAGAAGCGTTTCCCACATCAAAGACGGTCTTCAAAGCTCCAAAGAAGCTAAAGATTCAAAGATCCAAAGATTGAAGACTCTAGAGTTGAAGACCTTGAAAGAAAAGCTTCATAGAAGATCTCAAGAATTCAACTCAAGTTCCACGAATCAAATCTTCGGAAATCTCGTCGAACAAATTGGCACGCCCGGTGGGACAGTCTCTACCTTTCATCTCTTTCTCCCGTACAAGACATACAACATAACATCCAAAGACAATGCTTCTAACGCTTCAAGTAACACTTCCAGAAGACCGATTACTCGCAGCCGCTCTAAAGAAATACAGTCGGAAGAGCAACCTACCTTTGAGATCGCGAGAAATATATGGGAACGGATCTCAAGAGACCCGAAAGCTGGGGTCGTCATCAAAGAGAATCCTACACTTGACAAGCCTACCTCAGCTTCTGAACGACCAAGCGAGGAGGCATCCCAACCAAATGTAATGTCAGTCATGATGGCCGACGTGGGAACAAGTGAGGAGAGAATGGCTGAACTTGAAAAGAAAGTTAACATACTACTGAAGGCAGTTGAAGAAAGGGATTATGAGATTGCATCCCTCAAGAATCATATTGAAAGTCGTGATGCGGCTGAATCAAGTCATACACCTGCAGTCAAGAATAATGACAAAGGGAAGAAGGTTTTGCAAGATAGTCAACCCCAAGATTCAACTTCAATTGCTTCGTTGTCTGTCCAAAAGTTGCAGAAAATGATTGCGAACTCCATCAAGGCTCAATATGGAGGTCCCAGTCAAACCTCCCTCTTGTATTCCAAGCCGTATACGAAGAGGATTGACAACCTAAGGATGCCAAATAGGTATCAGCCGCCAAAATTCCAGCAGTTCGACGGAAAGGGCAACCCAAAGCAACATGTTGCTCACTTCATTGAAACCTGTGAAAACGCTGGAACTAGAGGAGACCTGCTAGTTAAACAGTTTGTTCGAACTCTGAAGGAAACGCCTTCGACTGGTACACGGACCTGGAGCCCGAAACTATCGATAGCTGGGAGCAGCTTGAGAGAGAATTCCTCAATCGTTTCTACAGTACTAGGCGCATCGTTAGTATGA

Protein sequence

MKNGAILPDVSKLEPLDESNYCRCSDKGKITNKGKSTMVIDLDSSKVTDMLKFSQSKSEPVDTNPTSVTKGKERQINDRSDRPILLSKMTSLLLWSWNPTWNLVSRSLLNKAGLKIVLEADKVILTKNGNFVPKGGVPKKKKNIKFWFVICRRRSVSHIKDGLQSSKEAKDSKIQRLKTLELKTLKEKLHRRSQEFNSSSTNQIFGNLVEQIGTPGGTVSTFHLFLPYKTYNITSKDNASNASSNTSRRPITRSRSKEIQSEEQPTFEIARNIWERISRDPKAGVVIKENPTLDKPTSASERPSEEASQPNVMSVMMADVGTSEERMAELEKKVNILLKAVEERDYEIASLKNHIESRDAAESSHTPAVKNNDKGKKVLQDSQPQDSTSIASLSVQKLQKMIANSIKAQYGGPSQTSLLYSKPYTKRIDNLRMPNRYQPPKFQQFDGKGNPKQHVAHFIETCENAGTRGDLLVKQFVRTLKETPSTGTRTWSPKLSIAGSSLRENSSIVSTVLGASLV

Homology

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BLAST of ClCG09G014950 vs. TrEMBL
Match: E5GCP6_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 7.8e-69
Identity = 138/245 (56.33%), Postives = 185/245 (75.51%), Query Frame = 1


Query: 240 SNASSNTSRRPITRSRSKEI--QSEEQPTFEIARNIWERISRDPKAGVVIKENPTLDKPT 299
           S+ +S++    +T+S  K    + E++  F + +   E++   PK G++I++NP  +  T
Sbjct: 10  SSVASDSYIGLVTQSHLKRSMQEQEQEQGFVLKKKSLEQLIESPKGGIIIRDNPLFNNST 69

Query: 300 SASERPSEEASQPNVMSVMMADVGTSEERMAELEKKVNILLKAVEERDYEIASLKNHIES 359
            AS   S++AS   V+SVMM DV T+E  + E+E+K+N L+K +EERD+EIA+LK+ +++
Sbjct: 70  PASNL-SDKASHLEVVSVMMVDV-TAEATVTEMERKINFLMKVIEERDHEIAALKDQMKA 129

Query: 360 RDAAESSHTPAVKNNDKGKKVLQDSQPQD-STSIASLSVQKLQKMIANSIKAQYGGPSQT 419
            +  ESS TP VK  DKGK V+Q++QPQ  S S+ASLSVQ+LQ MIANSI+AQYGGP QT
Sbjct: 130 CETGESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQYGGPPQT 189

Query: 420 SLLYSKPYTKRIDNLRMPNRYQPPKFQQFDGKGNPKQHVAHFIETCENAGTRGDLLVKQF 479
           S +YSK YTKRIDNLRMP  YQPPKFQQFDG+GNPKQH+AHF+ETCENAG+RGD LVKQF
Sbjct: 190 SFMYSKSYTKRIDNLRMPLGYQPPKFQQFDGRGNPKQHIAHFVETCENAGSRGDQLVKQF 249

Query: 480 VRTLK 482
           VR+LK
Sbjct: 250 VRSLK 252

[Close]

BLAST of ClCG09G014950 vs. TrEMBL
Match: E5GB67_CUCME (Retrotransposon gag protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.1e-52
Identity = 113/220 (51.36%), Postives = 145/220 (65.91%), Query Frame = 1


Query: 262 EEQPTFEIARNIWERISRDPKAGVVIKENPTLDKPTSASERPSEEASQPNVMSVMMADVG 321
           E++  F + +   E++    K G++I++NP  +  T  S   S++ S   V+SVMM DV 
Sbjct: 3   EQEQGFVLKKKSLEQLIESLKGGIIIRDNPLFNNSTPTSNL-SDKESHLEVVSVMMIDV- 62

Query: 322 TSEERMAELEKKVNILLKAVEERDYEIASLKNHIESRDAAESSHTPAVKNNDKGKKVLQD 381
           T+E  MAE+EKK+N L+K VEERD+EIA+LK+ +++ ++AESS T  VK  DKGK V   
Sbjct: 63  TAEATMAEMEKKINFLMKVVEERDHEIAALKDQMKACESAESSQTSVVKTTDKGKNV--- 122

Query: 382 SQPQDSTSIASLSVQKLQKMIANSIKAQYGGPSQTSLLYSKPYTKRIDNLRMPNRYQPPK 441
                                       YGGP QTS +YSKPYTKRIDNLRMP  YQPPK
Sbjct: 123 ----------------------------YGGPPQTSFMYSKPYTKRIDNLRMPLGYQPPK 182

Query: 442 FQQFDGKGNPKQHVAHFIETCENAGTRGDLLVKQFVRTLK 482
           FQQFDGKGNPKQH+AHF+ETCENAG+RGD LV+QFVR+LK
Sbjct: 183 FQQFDGKGNPKQHIAHFVETCENAGSRGDQLVRQFVRSLK 189

[Close]

BLAST of ClCG09G014950 vs. TrEMBL
Match: M5W5Z1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022233mg PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.2e-42
Identity = 114/264 (43.18%), Postives = 153/264 (57.95%), Query Frame = 1


Query: 236 KDNASNASSNTSRRPITRSRSKEIQSEEQ----PTFEIARNIWERISRDPKAGVVIKENP 295
           K  +++ SS  S   +TRS++K I         PT   A+++  R   D   G      P
Sbjct: 15  KSVSASFSSRDSAGVVTRSKAKAIFVTRHVTSIPTQAKAKDV-NRRHADSSTGSYHGSPP 74

Query: 296 TLDKPTSASERPSEEASQPNVMSVMMADVGTSEERMAELEKKVNILLKAVEERDYEIASL 355
              +   AS    E  S    M VM+    + EE+MA + + V  L K VEE+D +IASL
Sbjct: 75  DDQQKKIASASVGESYSM--AMQVMVTGAMSIEEQMAHMSEAVTKLTKMVEEKDVQIASL 134

Query: 356 KNHIE-------SRDAAESSHTPAVKNNDKGKKVLQDSQPQ-----DSTSIASLSVQKLQ 415
            N  E       S+D  +       ++++KG     +S  +     ++ S+ SLS+Q+LQ
Sbjct: 135 INKWETHQDKEPSQDVHKKESHHEAESSEKGLGHETESGDKSHGKGNTASVGSLSIQQLQ 194

Query: 416 KMIANSIKAQYGGPSQTSLLYSKPYTKRIDNLRMPNRYQPPKFQQFDGKGNPKQHVAHFI 475
            MI N+I+AQYGGPSQ + +YSKPYTKR+DNLRMP  YQPPKF QFDGKGNPKQHVAHFI
Sbjct: 195 DMITNTIRAQYGGPSQDTFIYSKPYTKRLDNLRMPMGYQPPKFMQFDGKGNPKQHVAHFI 254

Query: 476 ETCENAGTRGDLLVKQFVRTLKET 484
           + C +AGT  D LVKQFVR+L+ T
Sbjct: 255 DMCNSAGTNDDYLVKQFVRSLRGT 275

[Close]

BLAST of ClCG09G014950 vs. TrEMBL
Match: M5W7Y6_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa018422mg PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.8e-40
Identity = 109/263 (41.44%), Postives = 144/263 (54.75%), Query Frame = 1


Query: 230 TYNITSKDNASNASS-NTSRRPITRSRSKEI-------QSEEQPTFEIARNIWERISRDP 289
           T ++TS    + A   N  R P+     K I        S E+ +F  ++N  ER S  P
Sbjct: 41  TRHVTSIPTQAKAKDVNRRREPVINLAKKTIARADERNSSNEEKSFSCSKNSRER-SLSP 100

Query: 290 KAGVVIKENPTLDKPTSASERPSEEASQPN----VMSVMMADVGTSEERMAELEKKVNIL 349
            +      +     P    ++    AS        M VM+    + EE++A + + V  L
Sbjct: 101 VSDADSSTSSYHGSPPDYQQKKIASASVGESYFMAMQVMVTGAMSIEEQLAHMSEAVTKL 160

Query: 350 LKAVEERDYEIASLKNHIESRDAAESSHTPAVKNN----DKGKKVLQDSQPQDSTSIASL 409
            K VEE+D +IASL N  E+    E S     K +    +  +K L      +S S+ SL
Sbjct: 161 TKMVEEKDVQIASLINKWETHQDKEPSQDVHKKESHHEAESSEKGL--GHETESASVGSL 220

Query: 410 SVQKLQKMIANSIKAQYGGPSQTSLLYSKPYTKRIDNLRMPNRYQPPKFQQFDGKGNPKQ 469
           S+Q+LQ MI N+I+AQYG PSQ + +YSKPYTKR+DNLRMP  YQPPKF QF+GKGNPKQ
Sbjct: 221 SIQQLQDMITNTIRAQYGRPSQDTFIYSKPYTKRLDNLRMPTGYQPPKFMQFNGKGNPKQ 280

Query: 470 HVAHFIETCENAGTRGDLLVKQF 477
           HVAHFIE C +AGT  D LVKQF
Sbjct: 281 HVAHFIEMCNSAGTNDDYLVKQF 300

[Close]

BLAST of ClCG09G014950 vs. TrEMBL
Match: M5WEC9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025679mg PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.7e-39
Identity = 93/183 (50.82%), Postives = 121/183 (66.12%), Query Frame = 1


Query: 313 MSVMMADVGTSEERMAELEKKVNILLKAVEERDYEIASLKNHIESRDAAESSHTPAVK-- 372
           M VM+    + EE++A + + V  L+K VEE+D +IASL N  E+    E S     K  
Sbjct: 3   MQVMVTGAMSIEEQLAHMSEAVTKLMKMVEEKDVQIASLINKWETHQDKEPSEDVHKKES 62

Query: 373 -----NNDKGKKVLQDSQPQ-----DSTSIASLSVQKLQKMIANSIKAQYGGPSQTSLLY 432
                +++KG     +S  +     ++ S+ SLS+Q+LQ MI N+I+AQYGGPSQ + +Y
Sbjct: 63  HHEAESSEKGLGHETESGDKSHGKGNTASVGSLSIQQLQDMITNTIRAQYGGPSQDTFIY 122

Query: 433 SKPYTKRIDNLRMPNRYQPPKFQQFDGKGNPKQHVAHFIETCENAGTRGDLLVKQFVRTL 484
           SKPYTKR+DNLRMP  YQP KF QFDGKGNPKQHVAHFIE C + GT  D LVKQFVR+L
Sbjct: 123 SKPYTKRLDNLRMPTGYQPLKFMQFDGKGNPKQHVAHFIEMCNSVGTNDDYLVKQFVRSL 182

[Close]

BLAST of ClCG09G014950 vs. NCBI nr
Match: gi|307136441|gb|ADN34247.1| (ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 269.6 bits (688), Expect = 1.1e-68
Identity = 138/245 (56.33%), Postives = 185/245 (75.51%), Query Frame = 1


Query: 240 SNASSNTSRRPITRSRSKEI--QSEEQPTFEIARNIWERISRDPKAGVVIKENPTLDKPT 299
           S+ +S++    +T+S  K    + E++  F + +   E++   PK G++I++NP  +  T
Sbjct: 10  SSVASDSYIGLVTQSHLKRSMQEQEQEQGFVLKKKSLEQLIESPKGGIIIRDNPLFNNST 69

Query: 300 SASERPSEEASQPNVMSVMMADVGTSEERMAELEKKVNILLKAVEERDYEIASLKNHIES 359
            AS   S++AS   V+SVMM DV T+E  + E+E+K+N L+K +EERD+EIA+LK+ +++
Sbjct: 70  PASNL-SDKASHLEVVSVMMVDV-TAEATVTEMERKINFLMKVIEERDHEIAALKDQMKA 129

Query: 360 RDAAESSHTPAVKNNDKGKKVLQDSQPQD-STSIASLSVQKLQKMIANSIKAQYGGPSQT 419
            +  ESS TP VK  DKGK V+Q++QPQ  S S+ASLSVQ+LQ MIANSI+AQYGGP QT
Sbjct: 130 CETGESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQYGGPPQT 189

Query: 420 SLLYSKPYTKRIDNLRMPNRYQPPKFQQFDGKGNPKQHVAHFIETCENAGTRGDLLVKQF 479
           S +YSK YTKRIDNLRMP  YQPPKFQQFDG+GNPKQH+AHF+ETCENAG+RGD LVKQF
Sbjct: 190 SFMYSKSYTKRIDNLRMPLGYQPPKFQQFDGRGNPKQHIAHFVETCENAGSRGDQLVKQF 249

Query: 480 VRTLK 482
           VR+LK
Sbjct: 250 VRSLK 252

[Close]

BLAST of ClCG09G014950 vs. NCBI nr
Match: gi|659074577|ref|XP_008437679.1| (PREDICTED: uncharacterized protein LOC103483019 [Cucumis melo])

HSP 1 Score: 249.6 bits (636), Expect = 1.2e-62
Identity = 121/144 (84.03%), Postives = 133/144 (92.36%), Query Frame = 1


Query: 338 LKAVEERDYEIASLKNHIESRDAAESSHTPAVKNNDKGKKVLQDSQPQDSTSIASLSVQK 397
           +KAVEERD+EIA LKNHIESRDAAESSHT  +KN +KGK ++Q+SQPQ+STSIASLSVQ+
Sbjct: 1   MKAVEERDFEIALLKNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQQ 60

Query: 398 LQKMIANSIKAQYGGPSQTSLLYSKPYTKRIDNLRMPNRYQPPKFQQFDGKGNPKQHVAH 457
           LQ+MIANSIK QYGGP QT  LYSKPYTKRIDN+RMP+ YQPPKFQQFDGKGNPKQHVAH
Sbjct: 61  LQEMIANSIKTQYGGPVQTFSLYSKPYTKRIDNMRMPHEYQPPKFQQFDGKGNPKQHVAH 120

Query: 458 FIETCENAGTRGDLLVKQFVRTLK 482
           FIETCE AGTRGDLLVKQFVRTLK
Sbjct: 121 FIETCETAGTRGDLLVKQFVRTLK 144

[Close]

BLAST of ClCG09G014950 vs. NCBI nr
Match: gi|307135838|gb|ADN33709.1| (retrotransposon gag protein [Cucumis melo subsp. melo])

HSP 1 Score: 213.8 bits (543), Expect = 7.3e-52
Identity = 113/220 (51.36%), Postives = 145/220 (65.91%), Query Frame = 1


Query: 262 EEQPTFEIARNIWERISRDPKAGVVIKENPTLDKPTSASERPSEEASQPNVMSVMMADVG 321
           E++  F + +   E++    K G++I++NP  +  T  S   S++ S   V+SVMM DV 
Sbjct: 3   EQEQGFVLKKKSLEQLIESLKGGIIIRDNPLFNNSTPTSNL-SDKESHLEVVSVMMIDV- 62

Query: 322 TSEERMAELEKKVNILLKAVEERDYEIASLKNHIESRDAAESSHTPAVKNNDKGKKVLQD 381
           T+E  MAE+EKK+N L+K VEERD+EIA+LK+ +++ ++AESS T  VK  DKGK V   
Sbjct: 63  TAEATMAEMEKKINFLMKVVEERDHEIAALKDQMKACESAESSQTSVVKTTDKGKNV--- 122

Query: 382 SQPQDSTSIASLSVQKLQKMIANSIKAQYGGPSQTSLLYSKPYTKRIDNLRMPNRYQPPK 441
                                       YGGP QTS +YSKPYTKRIDNLRMP  YQPPK
Sbjct: 123 ----------------------------YGGPPQTSFMYSKPYTKRIDNLRMPLGYQPPK 182

Query: 442 FQQFDGKGNPKQHVAHFIETCENAGTRGDLLVKQFVRTLK 482
           FQQFDGKGNPKQH+AHF+ETCENAG+RGD LV+QFVR+LK
Sbjct: 183 FQQFDGKGNPKQHIAHFVETCENAGSRGDQLVRQFVRSLK 189

[Close]

BLAST of ClCG09G014950 vs. NCBI nr
Match: gi|659118742|ref|XP_008459280.1| (PREDICTED: uncharacterized protein LOC103498458 [Cucumis melo])

HSP 1 Score: 194.5 bits (493), Expect = 4.6e-46
Identity = 103/211 (48.82%), Postives = 140/211 (66.35%), Query Frame = 1


Query: 271 RNIWERISRDPKAGVVIKENPTLDKPTSASERPSEEASQPNVMSVMMADVGTSEERMAEL 330
           ++I +++   PKAG+ IKENP  D   SA  +  +EA  P+VMSVMM D+ T+E  M E+
Sbjct: 2   QSILKQLMLSPKAGIFIKENPLYDNFDSALSKLKKEA-HPDVMSVMMVDI-TAEAAMTEM 61

Query: 331 EKKVNILLKAVEERDYEIASLKNHIESRDAAESSHTPAVKNNDKGKKVLQDSQPQDSTSI 390
           E+K+N+++K V+E+D++I +L+  ++  +  +SS TP                       
Sbjct: 62  ERKINLVMKVVKEQDHKITALREQMQIHETTKSSQTP----------------------- 121

Query: 391 ASLSVQKLQKMIANSIKAQYGGPSQTSLLYSKPYTKRIDNLRMPNRYQPPKFQQFDGKGN 450
                 +LQ MI +SI+AQYGGP QTS +YSKPYTKRI++LRMP  YQP KFQQFD KGN
Sbjct: 122 ------QLQDMITSSIRAQYGGPPQTSFMYSKPYTKRINDLRMPVGYQPLKFQQFDRKGN 181

Query: 451 PKQHVAHFIETCENAGTRGDLLVKQFVRTLK 482
             QHVAHF+ETC+N G+RGD LVKQFVR+LK
Sbjct: 182 LNQHVAHFVETCKNTGSRGDQLVKQFVRSLK 181

[Close]

BLAST of ClCG09G014950 vs. NCBI nr
Match: gi|848894615|ref|XP_012847343.1| (PREDICTED: uncharacterized protein LOC105967287 [Erythranthe guttata])

HSP 1 Score: 193.7 bits (491), Expect = 7.8e-46
Identity = 106/209 (50.72%), Postives = 138/209 (66.03%), Query Frame = 1


Query: 284 GVVIKENPTLDKPTSASERPSEEASQPNVMSVMMADVGTSEERMAELEKKVNILLKAVEE 343
           G +     T    +S SE    ++     + VM+ D  + +E++A L + V  L K VE+
Sbjct: 28  GKIDNTTTTNGSSSSGSEEIDSKSQAFTTLPVMVVDATSVDEQLAHLTQTVANLQKIVED 87

Query: 344 RDYEIASLKNHIESRDAAESS--HTPAVKNNDKGKKVLQDSQPQ---------DSTSIAS 403
           +D +IA L + +E  +  E S  H      ++K K+V +++ P+          S S+A+
Sbjct: 88  KDIKIAQLMDKLEQSEVGEFSPKHESYPLRDEKAKQV-EEAHPKPDFVQGATHSSMSVAT 147

Query: 404 LSVQKLQKMIANSIKAQYGGPSQTSLLYSKPYTKRIDNLRMPNRYQPPKFQQFDGKGNPK 463
           LSVQ+LQ+MIAN+IKAQYGGPSQ S +YSKPYTKRID LRMP  YQPPK QQFDGKGNPK
Sbjct: 148 LSVQQLQEMIANTIKAQYGGPSQVSPMYSKPYTKRIDALRMPAGYQPPKLQQFDGKGNPK 207

Query: 464 QHVAHFIETCENAGTRGDLLVKQFVRTLK 482
           QH+AHFIETC NAGT GDLLVKQFVR+LK
Sbjct: 208 QHIAHFIETCNNAGTNGDLLVKQFVRSLK 235

The following BLAST results are available for this feature:

BLAST of ClCG09G014950 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GCP6_CUCME	7.8e-69	56.33	Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
E5GB67_CUCME	5.1e-52	51.36	Retrotransposon gag protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
M5W5Z1_PRUPE	1.2e-42	43.18	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022233mg PE=4 SV=1	[more]
M5W7Y6_PRUPE	5.8e-40	41.44	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa018422mg PE=4 S...	[more]
M5WEC9_PRUPE	1.7e-39	50.82	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025679mg PE=4 SV=1	[more]

BLAST of ClCG09G014950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|307136441\|gb\|ADN34247.1\|	1.1e-68	56.33	ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]	[more]
gi\|659074577\|ref\|XP_008437679.1\|	1.2e-62	84.03	PREDICTED: uncharacterized protein LOC103483019 [Cucumis melo]	[more]
gi\|307135838\|gb\|ADN33709.1\|	7.3e-52	51.36	retrotransposon gag protein [Cucumis melo subsp. melo]	[more]
gi\|659118742\|ref\|XP_008459280.1\|	4.6e-46	48.82	PREDICTED: uncharacterized protein LOC103498458 [Cucumis melo]	[more]
gi\|848894615\|ref\|XP_012847343.1\|	7.8e-46	50.72	PREDICTED: uncharacterized protein LOC105967287 [Erythranthe guttata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G014950.1	ClCG09G014950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 320..340 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG09G014950	Cla004389	Watermelon (97103) v1	wcgwmB012

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG09G014950	Silver-seed gourd	carwcgB0628
ClCG09G014950	Cucumber (Chinese Long) v3	cucwcgB535
ClCG09G014950	Watermelon (97103) v2	wcgwmbB035
ClCG09G014950	Wax gourd	wcgwgoB033
ClCG09G014950	Cucumber (Gy14) v1	cgywcgB592
ClCG09G014950	Cucurbita maxima (Rimu)	cmawcgB075
ClCG09G014950	Cucurbita maxima (Rimu)	cmawcgB444
ClCG09G014950	Cucurbita moschata (Rifu)	cmowcgB072
ClCG09G014950	Cucurbita moschata (Rifu)	cmowcgB445
ClCG09G014950	Wild cucumber (PI 183967)	cpiwcgB541
ClCG09G014950	Cucumber (Chinese Long) v2	cuwcgB514
ClCG09G014950	Melon (DHL92) v3.5.1	mewcgB176
ClCG09G014950	Watermelon (97103) v1	wcgwmB010
ClCG09G014950	Cucurbita pepo (Zucchini)	cpewcgB221
ClCG09G014950	Cucurbita pepo (Zucchini)	cpewcgB578
ClCG09G014950	Bottle gourd (USVL1VR-Ls)	lsiwcgB215
ClCG09G014950	Cucumber (Gy14) v2	cgybwcgB473
ClCG09G014950	Melon (DHL92) v3.6.1	medwcgB171