ClCG09G012430 (gene) Watermelon (Charleston Gray)

NameClCG09G012430
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr09 : 14305407 .. 14305934 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCCATCTTCCGACAAGAGCGATGAAGAAGTTCACAAGGTATGGTCTAAGGAGGAAAGCGTCATGGACATCGTGTCAGGTTTGGAACCTAACCACCAACCAGGATGGGCCGACTTTGACTATGTGTATAGTGTGATTAACTACTGGAGCACTAGATACTACTTGTCATAGATGTGAATCGAGGTCAATTGGTGTTGTATGATTCATACCCATAATATATCTTCATGGAGGACATCACACTATACTTGATGCTGTTATCATACACGTTGCCTTTAATTTGCCGAGTTCTGTAACCTTGGTGGACATAAACCCGATCTAGCTCCTACCCCTTGGAAAGTGTTCTCGAAAGAGACTGGTAACATCCAAAGTACCAAGTCTTTGGATTGCATGGTGTTTTGTCTAAAATTTTTCGAACACATGGTCACTGGAACCCCTGTAAAATTAAAGACGTACTGGTTCAAGATCGAATGCTGGACTTCATACTATAGTAGGGTAGAACGTTGGGCCAACATATTCTTTTACTAG

mRNA sequence

ATGGTTCCATCTTCCGACAAGAGCGATGAAGAAGTTCACAAGGTATGGTCTAAGGAGGAAAGCGTCATGGACATCGTGTCAGGTTTGGAACCTAACCACCAACCAGGATGGGCCGACTTTGACTATGTGTATAGTTTCTGTAACCTTGGTGGACATAAACCCGATCTAGCTCCTACCCCTTGGAAAGTGTTCTCGAAAGAGACTGGTAACATCCAAAGTACCAAGTCTTTGGATTGCATGGTGTTTTGTCTAAAATTTTTCGAACACATGGTCACTGGAACCCCTGTAAAATTAAAGACGTACTGGTTCAAGATCGAATGCTGGACTTCATACTATAGTAGGGTAGAACGTTGGGCCAACATATTCTTTTACTAG

Coding sequence (CDS)

ATGGTTCCATCTTCCGACAAGAGCGATGAAGAAGTTCACAAGGTATGGTCTAAGGAGGAAAGCGTCATGGACATCGTGTCAGGTTTGGAACCTAACCACCAACCAGGATGGGCCGACTTTGACTATGTGTATAGTTTCTGTAACCTTGGTGGACATAAACCCGATCTAGCTCCTACCCCTTGGAAAGTGTTCTCGAAAGAGACTGGTAACATCCAAAGTACCAAGTCTTTGGATTGCATGGTGTTTTGTCTAAAATTTTTCGAACACATGGTCACTGGAACCCCTGTAAAATTAAAGACGTACTGGTTCAAGATCGAATGCTGGACTTCATACTATAGTAGGGTAGAACGTTGGGCCAACATATTCTTTTACTAG

Protein sequence

MVPSSDKSDEEVHKVWSKEESVMDIVSGLEPNHQPGWADFDYVYSFCNLGGHKPDLAPTPWKVFSKETGNIQSTKSLDCMVFCLKFFEHMVTGTPVKLKTYWFKIECWTSYYSRVERWANIFFY
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G012430.1ClCG09G012430.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownSSF54001Cysteine proteinasescoord: 9..99
score: 5.2

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG09G012430Watermelon (Charleston Gray)wcgwcgB003
ClCG09G012430Watermelon (Charleston Gray)wcgwcgB023
ClCG09G012430Cucurbita maxima (Rimu)cmawcgB278
ClCG09G012430Cucumber (Gy14) v1cgywcgB534
ClCG09G012430Cucumber (Gy14) v1cgywcgB555
ClCG09G012430Cucurbita maxima (Rimu)cmawcgB440
ClCG09G012430Cucurbita maxima (Rimu)cmawcgB509
ClCG09G012430Cucurbita maxima (Rimu)cmawcgB719
ClCG09G012430Cucurbita moschata (Rifu)cmowcgB270
ClCG09G012430Cucurbita moschata (Rifu)cmowcgB439
ClCG09G012430Cucurbita moschata (Rifu)cmowcgB506
ClCG09G012430Cucurbita moschata (Rifu)cmowcgB722
ClCG09G012430Wild cucumber (PI 183967)cpiwcgB178
ClCG09G012430Wild cucumber (PI 183967)cpiwcgB180
ClCG09G012430Wild cucumber (PI 183967)cpiwcgB184
ClCG09G012430Cucumber (Chinese Long) v2cuwcgB176
ClCG09G012430Cucumber (Chinese Long) v2cuwcgB175
ClCG09G012430Cucumber (Chinese Long) v2cuwcgB181
ClCG09G012430Melon (DHL92) v3.5.1mewcgB310
ClCG09G012430Melon (DHL92) v3.5.1mewcgB409
ClCG09G012430Melon (DHL92) v3.5.1mewcgB410
ClCG09G012430Watermelon (97103) v1wcgwmB007
ClCG09G012430Watermelon (97103) v1wcgwmB017
ClCG09G012430Watermelon (97103) v1wcgwmB031
ClCG09G012430Cucurbita pepo (Zucchini)cpewcgB187
ClCG09G012430Cucurbita pepo (Zucchini)cpewcgB625
ClCG09G012430Bottle gourd (USVL1VR-Ls)lsiwcgB315
ClCG09G012430Bottle gourd (USVL1VR-Ls)lsiwcgB385
ClCG09G012430Cucumber (Gy14) v2cgybwcgB162
ClCG09G012430Cucumber (Gy14) v2cgybwcgB164
ClCG09G012430Cucumber (Gy14) v2cgybwcgB168
ClCG09G012430Melon (DHL92) v3.6.1medwcgB305
ClCG09G012430Melon (DHL92) v3.6.1medwcgB398
ClCG09G012430Melon (DHL92) v3.6.1medwcgB399
ClCG09G012430Silver-seed gourdcarwcgB0548
ClCG09G012430Silver-seed gourdcarwcgB0682
ClCG09G012430Silver-seed gourdcarwcgB0753
ClCG09G012430Cucumber (Chinese Long) v3cucwcgB182
ClCG09G012430Cucumber (Chinese Long) v3cucwcgB184
ClCG09G012430Cucumber (Chinese Long) v3cucwcgB188
ClCG09G012430Watermelon (97103) v2wcgwmbB005
ClCG09G012430Watermelon (97103) v2wcgwmbB020
ClCG09G012430Watermelon (97103) v2wcgwmbB035
ClCG09G012430Wax gourdwcgwgoB013
ClCG09G012430Wax gourdwcgwgoB027
ClCG09G012430Wax gourdwcgwgoB034
ClCG09G012430Wax gourdwcgwgoB043