ClCG09G006980 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCCGACGAACTTCGTGTAGAAGAAGCAATGCCATGGCTTCCTACTCAAGTTCTTGACGAAGCTTGCGATATCAAGGTTCTCTACACTTCTACTTCTCTTAATTCCTCGCCTAATTTCTTTTCTTCACTTCTGTTTTCTGTTTGTTTCTCAGGAAAACAAAAATCTTCCGACAAAAATTAGTTCTACGTTCCGTCTTAATCTTTTATTTTTGATGATCATCAGGTGCAACATCACCACCACATACAACAACCTTACTTCCTCCATCGCCAACGGCGACGCGATCATCCTCTGCTATCGCCGTCCGATTTCGCTCTTTCACCGGTACATTATTCGCATTGTTTTCTATCCCCTAGGTTTACGATTACGATTTTTGATTACGTTACTGATTTTGTTCTTTTTGATTCGGCGAAATTGAATTAGAATCAGAAATCGAAGTACAGTATGCCGCACCTGAGGCAAAAACCAGCGGCTGCGGCGGCGAATTGGACGGCTGGAGGACATGGAATGCAAGCGATTTTTCTCGATTCCGGCCGGCAATTAGGCGGTACCGGCGTTTTTCTTCCTCGGGGAACAGGCGGCACCAGTTACCAACCAAACAAGAAGCCTGGTACGATTCCGAATCCGATTCATCTTTTATTAATCAATAATTTTCTCCATTGAGAGATTAAAAAAAAATAAAAATAAATAAAGAAACAGGGGAAGAACTCTGTATTCGTGCGTACCTGTTTCTGCTTCTCTCTCTCTCTGTTTTCAATCAATTCAATGGAAAAGAAGAAGAAAAAAACCTTTTGATTGCTAATTTTAATTATCATAATAGAATATATTAAAAAAAACAAAAATAGAATATTGTATTTTCTCAAATAAGTGCATGTCATAACCAAATGAAAATCAACCAATTGAAAACATAATATATATATACATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGTTATCTTATTGTATTAAATCCAAAATTCGCTTTTGTTCTGTTACTGTATAATAAATGAGGATATGTACTAAAAATATTAAACGAAGAATATTGTCATACTATGTATGTATCTTTTAAAAATAAAATAAATAGGAGTTGGATTAACAATTACCATATATATATTGATTTTTGTATTCAATCAATATATGTCAACAAACTCCTACCATATAAATTCATATCCCTATATTTGTAGGATTAGTTTAGAAAATCACCTTTAGATGTATATATAAAATTCGAACTCGAATATATTTTAGATTGATTTTAGACATGATTATTGTAACGATAAAAAAATTGCAAGGGTAGATATTTTCTTAAATGCTAAATTAAAAAAATAAAATAACTTCCAACTAGGTTTATATATTATAATATTGACGAAATGGAGTGTTGAAAAGACTATATTTAAACATTTTTTTTCTTTAATTGAAAGATACCAATTCAGCAACCTTATTTCCTAATACAAATTTTCATTAAAACTTATTCAAATAGTTATCCGGTAAAAGTTATTATTATTGTTTTTTTTTGGAATTTTCATGAATGACGTAATCTATAAAAGAAAAATAACAAAAAAAAAAAAAGAAAAGAAATGTAACGCCTTTCTTAAATTACAATCATGCATGTTGTTTAAAATTAAAAAAAAAAAAAAAAAGAAAACATACATGCATGTGAACAAGGTTTAATCCACAATTGAAATTCAAAATAATAATAATTAAAAATGAAAAATCCATACTTGGGATTCCTATTTTTAGACTTAAAATTGTGAAATTTATTTGCAGCTTGCTCCATGGTGCTTGTCCCTGCTCGTGTTGTTCAAGCTCTTAATCTCGATGTTCAAGCATTGGGATTGCAAATTCCCCCCCGTAAAGGTATGATAATATATTTTCAAGATTACTATAGAAGTTTAATAATGAAATAATCTCATCTCATAAATTCTTAAAATAATAATAATAATAAATAAATAAATAAATAAGGAGCAAAAAAATTGTCAATCTATTAATCTTAAGAGAGTTAAAATACCATTTTATCCATATAATTTGGGTTTATTCAATTTAAGTTTTCTAGGCAAAGTAAACTCAGCGTAATGGTATTAATATGCGTTTTGTACCTAGAGATTGTAAGTTTAATCCCTCTCTCTAAAGTTGTTGTAGTAAAAAAGAAAAAAAAAAAATTAAGTCATACTACTTTCAATAAATCTTTAATTTAGTCCTTTTAAAATTAATTTTTATTAAAATTGGTGTAATTATTTTAAACAATGTATTTGGTGTCTATTTGAACATCTTGCTATATTTGGGAATAAGTTGACCCTTAAAATTGAATAAAATAGAACATGTGAATATATTTTCAAAAATTATAGGAAAAATGTTAATAGATAAATTGTTTTTGAAAAATTCAATAATAAACTAACATTAATATTAAATTTAAGATTTGTTGAAAGATTAGAGAAAGAAAATGTAAATATTCAAAATCCACACATATAAAACAATATTTATAATTCAAAGAAAATAACTTATAATTTGACAAGATGCTGATGACTTGTTGAGACTTTTTTTTTTCTTTAATTAAAAATATTTGTTGCGACTTATTGCAGACCCCAAAAACAACCAAAAGGGAAGAGAATGCAACTCAATAGTGAAACACAAGAAGGGCAAAGATGTAACATCCACACATTGCTCCTTCATGTCCCAAAATCAAACCAATTCATCCCAAGAGATATTCCTTCCTAAAGAATGGACCTATTAA ATGGCTGCCGACGAACTTCGTGTAGAAGAAGCAATGCCATGGCTTCCTACTCAAGTTCTTGACGAAGCTTGCGATATCAAGGTTCTCTACACTTCTACTTCTCTTAATTCCTCGCCTAATTTCTTTTCTTCACTTCTGTTTTCTGTGCAACATCACCACCACATACAACAACCTTACTTCCTCCATCGCCAACGGCGACGCGATCATCCTCTGCTATCGCCGTCCGATTTCGCTCTTTCACCGAATCAGAAATCGAAGTACAGTATGCCGCACCTGAGGCAAAAACCAGCGGCTGCGGCGGCGAATTGGACGGCTGGAGGACATGGAATGCAAGCGATTTTTCTCGATTCCGGCCGGCAATTAGGCGGTACCGGCGTTTTTCTTCCTCGGGGAACAGGCGGCACCAGTTACCAACCAAACAAGAAGCCTGCTTGCTCCATGGTGCTTGTCCCTGCTCGTGTTGTTCAAGCTCTTAATCTCGATGTTCAAGCATTGGGATTGCAAATTCCCCCCCGTAAAGACCCCAAAAACAACCAAAAGGGAAGAGAATGCAACTCAATAGTGAAACACAAGAAGGGCAAAGATGTAACATCCACACATTGCTCCTTCATGTCCCAAAATCAAACCAATTCATCCCAAGAGATATTCCTTCCTAAAGAATGGACCTATTAA ATGGCTGCCGACGAACTTCGTGTAGAAGAAGCAATGCCATGGCTTCCTACTCAAGTTCTTGACGAAGCTTGCGATATCAAGGTTCTCTACACTTCTACTTCTCTTAATTCCTCGCCTAATTTCTTTTCTTCACTTCTGTTTTCTGTGCAACATCACCACCACATACAACAACCTTACTTCCTCCATCGCCAACGGCGACGCGATCATCCTCTGCTATCGCCGTCCGATTTCGCTCTTTCACCGAATCAGAAATCGAAGTACAGTATGCCGCACCTGAGGCAAAAACCAGCGGCTGCGGCGGCGAATTGGACGGCTGGAGGACATGGAATGCAAGCGATTTTTCTCGATTCCGGCCGGCAATTAGGCGGTACCGGCGTTTTTCTTCCTCGGGGAACAGGCGGCACCAGTTACCAACCAAACAAGAAGCCTGCTTGCTCCATGGTGCTTGTCCCTGCTCGTGTTGTTCAAGCTCTTAATCTCGATGTTCAAGCATTGGGATTGCAAATTCCCCCCCGTAAAGACCCCAAAAACAACCAAAAGGGAAGAGAATGCAACTCAATAGTGAAACACAAGAAGGGCAAAGATGTAACATCCACACATTGCTCCTTCATGTCCCAAAATCAAACCAATTCATCCCAAGAGATATTCCTTCCTAAAGAATGGACCTATTAA MAADELRVEEAMPWLPTQVLDEACDIKVLYTSTSLNSSPNFFSSLLFSVQHHHHIQQPYFLHRQRRRDHPLLSPSDFALSPNQKSKYSMPHLRQKPAAAAANWTAGGHGMQAIFLDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQALGLQIPPRKDPKNNQKGRECNSIVKHKKGKDVTSTHCSFMSQNQTNSSQEIFLPKEWTY
BLAST of ClCG09G006980 vs. TrEMBL
Match: A0A0A0KAI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390020 PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 1.1e-88 Identity = 178/231 (77.06%), Postives = 188/231 (81.39%), Query Frame = 1
BLAST of ClCG09G006980 vs. TrEMBL
Match: W9R722_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025061 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.3e-36 Identity = 107/226 (47.35%), Postives = 128/226 (56.64%), Query Frame = 1
BLAST of ClCG09G006980 vs. TrEMBL
Match: A0A067FN24_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045348mg PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.2e-36 Identity = 107/220 (48.64%), Postives = 133/220 (60.45%), Query Frame = 1
BLAST of ClCG09G006980 vs. TrEMBL
Match: B9GSP4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s05470g PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 8.3e-36 Identity = 100/225 (44.44%), Postives = 129/225 (57.33%), Query Frame = 1
BLAST of ClCG09G006980 vs. TrEMBL
Match: B9H876_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s23040g PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 8.3e-36 Identity = 101/219 (46.12%), Postives = 125/219 (57.08%), Query Frame = 1
BLAST of ClCG09G006980 vs. TAIR10
Match: AT4G02830.1 (AT4G02830.1 unknown protein) HSP 1 Score: 81.6 bits (200), Expect = 6.5e-16 Identity = 62/174 (35.63%), Postives = 83/174 (47.70%), Query Frame = 1
BLAST of ClCG09G006980 vs. TAIR10
Match: AT5G59050.1 (AT5G59050.1 unknown protein) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-10 Identity = 50/132 (37.88%), Postives = 66/132 (50.00%), Query Frame = 1
BLAST of ClCG09G006980 vs. NCBI nr
Match: gi|778727740|ref|XP_011659311.1| (PREDICTED: uncharacterized protein LOC105436162 [Cucumis sativus]) HSP 1 Score: 334.3 bits (856), Expect = 1.6e-88 Identity = 178/231 (77.06%), Postives = 188/231 (81.39%), Query Frame = 1
BLAST of ClCG09G006980 vs. NCBI nr
Match: gi|659100986|ref|XP_008451370.1| (PREDICTED: uncharacterized protein LOC103492680 [Cucumis melo]) HSP 1 Score: 319.7 bits (818), Expect = 4.0e-84 Identity = 170/230 (73.91%), Postives = 185/230 (80.43%), Query Frame = 1
BLAST of ClCG09G006980 vs. NCBI nr
Match: gi|1009148742|ref|XP_015892099.1| (PREDICTED: uncharacterized protein LOC107426424 [Ziziphus jujuba]) HSP 1 Score: 172.2 bits (435), Expect = 1.0e-39 Identity = 110/229 (48.03%), Postives = 141/229 (61.57%), Query Frame = 1
BLAST of ClCG09G006980 vs. NCBI nr
Match: gi|743840358|ref|XP_011026182.1| (PREDICTED: uncharacterized protein LOC105126865 [Populus euphratica]) HSP 1 Score: 163.7 bits (413), Expect = 3.7e-37 Identity = 101/224 (45.09%), Postives = 130/224 (58.04%), Query Frame = 1
BLAST of ClCG09G006980 vs. NCBI nr
Match: gi|743867427|ref|XP_011032727.1| (PREDICTED: uncharacterized protein LOC105131445 [Populus euphratica]) HSP 1 Score: 163.3 bits (412), Expect = 4.8e-37 Identity = 102/225 (45.33%), Postives = 129/225 (57.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |