ClCG09G004210 (gene) Watermelon (Charleston Gray)

Overview
NameClCG09G004210
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRING/U-box superfamily protein LENGTH=248
LocationCG_Chr09 : 3749806 .. 3752096 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGAGGATAGACAAATGGAAGTACATTATGTTGACACCGGGTTCCCTTACACGGTTACGGAGAGCTTCATGGATTTCTTTGAAGGGCTTCACCAACATCAAGTGCCTGCTTATGGCAATGCCGTGCCATTGCTCGATCAGGTAATAATGTGGCCATGAAAAACCGATATAATTTGTCATTACACTAACTTGAGTTTTGTCAGTTGAGAGAACAATAAGTACTGGAAATGTACGGTAATTTGTGTCTCAGGGAAATGCTTACTGGTCAATGAATATGCAATGTTACAAATTTGGAGTATCTGATCATGGGAATACGTATTATGGCCATTCGCATTCGGAGAGTCACCATTTACCACCTTCATTGGATGTTGGTGAAAGGGAATGGGAGTATCCTACTTCAGTGGTGAATGTCGAAATTCCCGAACCAACATATGCGCCATCCGTGGAGGAGGATGTAGTAGATGCTCATTCTATACCAGAAGAATGTAAGTGTTGACAAATCTGATACTCAGTCTGTTTATTTCATACTTTTGAAAGCCAACATTGAGTTTGTCACTATCATATTGTCGAGTTGAATCGTTGAAATTGTTTGAGAAACATAATATTTGTGCATCTTATCAGCATCTTTTTACTTTTTTTTTTTTCCTGTTTTGTAGGCGATTTAAGCCATCAGGAGGAGACCAGTACTTCTCAAGTATGATGCTTTCTCCTTGATTTTGCGATATGCCTCCTTTTCTGTTATGACCATCATCTACTTAATGCCTCGAATGAACTGTGCTTAATCAAAAAGTTGTTTGGGATCGTTTTTCTTATTCGTTACATAATGAATTAGGGTATAATCTTATCATCATCAAAGGTTGTAGTATGTTCATTTATCATTCTGAAGTTATGTGGGTGATGAATTTATTTTCTTCTCAAGTTATAGTTTCTCGTGCCAAAATGTCTCTCTTTCTAATCAGTTTTGTGGCCGACGAAGTTTCTTTGTTTTCACACTATGAAATTAGCTACTGTTTTGGTTTATAGCTCATTGAATCCGTCTTATTTTGTTTGTCTCTTCAGGTTACATGGCAAGATGAGATTGATCCTGACCACATGACCTATGAGGTATGGTTTCAACTCTATCATTTAGAAACCAGATTTGTTCAAGAACATGCTGTTTTAAGAAACGTTCTGTAGATCTTCAATTGATTGCCCTATAGAAGTTGAGGGTTTACCGAGCATGTGATTATTTGGCTCAATTATCAACAAACCCGTAGTTTCTTATGGCCACATGAACTATGGTTGGTTGTCAAATAAATGGGATCCATTGAAGTTTACTAGAAGAGCACAAAGGGAGTCTTTAGCCATGACCGTGGATCATCTTATATGGTTTTACAGGAACTGTTGGACTTGGGTGAATCAGTTGGAACTGAAAGTCGGGGTCTTTCTGAAGAACAAATAAGTTTGCTTCCGACTGCACGATGCAAGTTAACGAGTTTTTTCTCGAGGAAAAAGCCTGAGGAGAGGTATGGTTTTTTGACATATGTTGCATTTGGCTATCTTGCACTGTTAGTCTGCTTTACTTGGTGGATATAAGAACATTCCTGTCAAGAAAACATTGAATGATCTATCAAATAATCGGTTCAGTTGATATTTAGACAACAATCTCTGCGAACTGAGATGTACAACGTTGTCATTACACTATGCTTGTTTCTGATGTGTCTACTCTGAAAGTCATATGGATCTATTTTTGCTGCCATAATACACAAGTTAAAACAGTCGGTACTTTCCCGTACGGTGTTTATGTAGCAATGTCAAACTCGAATCTCTAAAAAGTTTTACAAATAAAATAGTCATATGAGATACACTCCTTAGAGTATGATCATGTTCTTGGAGTTGTCTCAAGTTACTGACTATAGATCTCGGTAAAAGAAGGTGTTTACATCTCGGTTCTTCTTGGTAAGGTGCTTACTCTTGGAGCTTCAGTATTTGATTGTACTTGTTTTGTTTTGTTCTTTTTTTTTTTTACTGCAGATGCGTTATTTGCCAAATGAGGTACAAGAGAGGGGACAAACAAATAAAATTACCCTGCAAGCATTTCTACCACAACAAATGCATAACCAAATGGCTCACCATCAACAAAGTTAGTTATTTTCTTGGCTTTCTCATGTATTTATACTTGCACGATTTCTGATCTAACTTGGTATATCATCACGCCACATCATCTTCGTGTTTATCAGATATGTCCGATCTGCAACATCGAGGTGTTCGGAGACGAAAGCACGAATGCATTGGGCAGCGATAACTGA

mRNA sequence

ATGAATGAGGATAGACAAATGGAAGTACATTATGTTGACACCGGGTTCCCTTACACGGTTACGGAGAGCTTCATGGATTTCTTTGAAGGGCTTCACCAACATCAAGTGCCTGCTTATGGCAATGCCGTGCCATTGCTCGATCAGGGAAATGCTTACTGGTCAATGAATATGCAATGTTACAAATTTGGAGTATCTGATCATGGGAATACGTATTATGGCCATTCGCATTCGGAGAGTCACCATTTACCACCTTCATTGGATGTTGGTGAAAGGGAATGGGAGTATCCTACTTCAGTGGTGAATGTCGAAATTCCCGAACCAACATATGCGCCATCCGTGGAGGAGGATGTAGTAGATGCTCATTCTATACCAGAAGAATGCGATTTAAGCCATCAGGAGGAGACCAGTACTTCTCAAGTTACATGGCAAGATGAGATTGATCCTGACCACATGACCTATGAGGAACTGTTGGACTTGGGTGAATCAGTTGGAACTGAAAGTCGGGGTCTTTCTGAAGAACAAATAAGTTTGCTTCCGACTGCACGATGCAAGTTAACGAGTTTTTTCTCGAGGAAAAAGCCTGAGGAGAGATGCGTTATTTGCCAAATGAGGTACAAGAGAGGGGACAAACAAATAAAATTACCCTGCAAGCATTTCTACCACAACAAATGCATAACCAAATGGCTCACCATCAACAAAATATGTCCGATCTGCAACATCGAGGTGTTCGGAGACGAAAGCACGAATGCATTGGGCAGCGATAACTGA

Coding sequence (CDS)

ATGAATGAGGATAGACAAATGGAAGTACATTATGTTGACACCGGGTTCCCTTACACGGTTACGGAGAGCTTCATGGATTTCTTTGAAGGGCTTCACCAACATCAAGTGCCTGCTTATGGCAATGCCGTGCCATTGCTCGATCAGGGAAATGCTTACTGGTCAATGAATATGCAATGTTACAAATTTGGAGTATCTGATCATGGGAATACGTATTATGGCCATTCGCATTCGGAGAGTCACCATTTACCACCTTCATTGGATGTTGGTGAAAGGGAATGGGAGTATCCTACTTCAGTGGTGAATGTCGAAATTCCCGAACCAACATATGCGCCATCCGTGGAGGAGGATGTAGTAGATGCTCATTCTATACCAGAAGAATGCGATTTAAGCCATCAGGAGGAGACCAGTACTTCTCAAGTTACATGGCAAGATGAGATTGATCCTGACCACATGACCTATGAGGAACTGTTGGACTTGGGTGAATCAGTTGGAACTGAAAGTCGGGGTCTTTCTGAAGAACAAATAAGTTTGCTTCCGACTGCACGATGCAAGTTAACGAGTTTTTTCTCGAGGAAAAAGCCTGAGGAGAGATGCGTTATTTGCCAAATGAGGTACAAGAGAGGGGACAAACAAATAAAATTACCCTGCAAGCATTTCTACCACAACAAATGCATAACCAAATGGCTCACCATCAACAAAATATGTCCGATCTGCAACATCGAGGTGTTCGGAGACGAAAGCACGAATGCATTGGGCAGCGATAACTGA

Protein sequence

MNEDRQMEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDAHSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDESTNALGSDN
Homology
[Close]
BLAST of ClCG09G004210 vs. Swiss-Prot
Match: BB_ARATH (E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 9.7e-66
Identity = 123/249 (49.40%), Postives = 164/249 (65.86%), Query Frame = 1 

Query: 1   MNEDRQM--EVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQ 60
           MN D +   + HY +TGFPY  T S+MDF+ G  Q  +  Y +A  +  Q N YW+MN  
Sbjct: 1   MNGDNRPVEDAHYTETGFPYAATGSYMDFYGGAAQGPLN-YDHAATMHPQDNLYWTMNTN 60

Query: 61  CYKFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVV 120
            YKFG S   N  +  S+  + HL   + +G   W+Y   V   + PE T A SV+    
Sbjct: 61  AYKFGFSGSDNASFYGSYDMNDHLS-RMSIGRTNWDYHPMVNVADDPENTVARSVQIGDT 120

Query: 121 DAHSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLL 180
           D HS  EEC ++++ +  + QV+WQD+IDPD MTYEEL++LGE+VGTESRGLS+E I  L
Sbjct: 121 DEHSEAEEC-IANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETL 180

Query: 181 PTARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPIC 240
           PT + K  S FSRK+  ERCVICQ++YK G++Q+ LPCKH YH++CI+KWL+INK+CP+C
Sbjct: 181 PTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVC 240

Query: 241 NIEVFGDES 248
           N EVFG+ S
Sbjct: 241 NSEVFGEPS 246

[Close]
BLAST of ClCG09G004210 vs. Swiss-Prot
Match: BBR_ARATH (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.4e-26
Identity = 57/111 (51.35%), Postives = 76/111 (68.47%), Query Frame = 1 

Query: 132 QEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSR 191
           ++E+ TSQ  W DE+DPD ++YEELL LG+ VGTESRGLS + I+ LP+ R K     ++
Sbjct: 225 EDESHTSQDAW-DEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGD--NQ 284

Query: 192 KKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEV 243
               E CVIC++ Y+  +  I LPCKH YH++CI  WL INK+CP+C+ EV
Sbjct: 285 NGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEV 332

[Close]
BLAST of ClCG09G004210 vs. Swiss-Prot
Match: MBR2_ARATH (E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana GN=MBR2 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.0e-14
Identity = 38/93 (40.86%), Postives = 49/93 (52.69%), Query Frame = 1 

Query: 146 IDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKPEERCVICQMRY 205
           +D D+M+YEELL LGE +G  S GLSEE I  +       +S     +  E C +CQ  Y
Sbjct: 567 LDVDNMSYEELLALGERIGDVSTGLSEEVILKVMKQHKHTSSAAGSHQDMEPCCVCQEEY 626

Query: 206 KRGDKQIKLPCKHFYHNKCITKWLTINKICPIC 239
             GD    L C H +H  C+ +WL +  +CPIC
Sbjct: 627 AEGDDLGTLGCGHEFHTACVKQWLMLKNLCPIC 659

[Close]
BLAST of ClCG09G004210 vs. Swiss-Prot
Match: HIP1_ORYSJ (Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica GN=HIP1 PE=1 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.9e-13
Identity = 39/93 (41.94%), Postives = 49/93 (52.69%), Query Frame = 1 

Query: 146 IDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKPEERCVICQMRY 205
           +D D+M+YEELL L E +G  S GLSEE+++ L   R   +        EE C ICQ  Y
Sbjct: 568 LDIDNMSYEELLALEERIGNVSTGLSEEEVTKLLKQRKFSSWRLEASVEEEPCCICQEEY 627

Query: 206 KRGDKQIKLPCKHFYHNKCITKWLTINKICPIC 239
             GD    L C H +H  C+ +WL +   CPIC
Sbjct: 628 VDGDDLGTLDCGHDFHVGCVRQWLVVKNTCPIC 660

[Close]
BLAST of ClCG09G004210 vs. Swiss-Prot
Match: MBR1_ARATH (E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana GN=MBR1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.3e-13
Identity = 44/100 (44.00%), Postives = 53/100 (53.00%), Query Frame = 1 

Query: 146 IDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRK----KPEERCVIC 205
           +D D+M+YEELL LGE +G  S GLSEE I L    + K TS         +  E C IC
Sbjct: 601 LDVDNMSYEELLALGERIGDVSTGLSEEVI-LKAMKQHKHTSSSPSSVELHQNIEPCCIC 660

Query: 206 QMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 242
           Q  Y  GD    L C H +H  CI +W+ I  +CPIC  E
Sbjct: 661 QEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 699

[Close]
BLAST of ClCG09G004210 vs. TrEMBL
Match: A0A0A0K8C4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G428220 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 2.3e-138
Identity = 233/249 (93.57%), Postives = 241/249 (96.79%), Query Frame = 1 

Query: 7   MEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD 66
           ME+HY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD
Sbjct: 1   MELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD 60

Query: 67  HGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDAHSIPEE 126
           HGNTYYGHS  ESHHLPPS+DVGEREWEYPTS +NVEIPEP+YAPSVEEDVVDAHSIPEE
Sbjct: 61  HGNTYYGHSE-ESHHLPPSMDVGEREWEYPTSAMNVEIPEPSYAPSVEEDVVDAHSIPEE 120

Query: 127 CDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT 186
           CDLSH+EETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT
Sbjct: 121 CDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT 180

Query: 187 SFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDE 246
           SFFSRKK +ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGD 
Sbjct: 181 SFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDG 240

Query: 247 STNALGSDN 256
           STNA  SDN
Sbjct: 241 STNASASDN 248

[Close]
BLAST of ClCG09G004210 vs. TrEMBL
Match: M5X1N2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010554mg PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 2.6e-81
Identity = 155/248 (62.50%), Postives = 191/248 (77.02%), Query Frame = 1 

Query: 1   MNEDRQMEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60
           MN + QM+VHY+DT FPYT TESFMDFF G+  H    YG+A+P+ DQ  AYWSMNM  Y
Sbjct: 1   MNGNGQMDVHYIDTDFPYTPTESFMDFFGGV-THVPMNYGHAMPMHDQETAYWSMNMHSY 60

Query: 61  KFGVSDHG-NTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVD 120
           KFG S  G N+YYG+ +  + HLP  +DV  R WE+P SV+N E P    +   EED V 
Sbjct: 61  KFGPSGPGSNSYYGNYYEVNDHLP-RMDVSRRTWEHP-SVMNSEEPANIDSHPEEEDAV- 120

Query: 121 AHSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLP 180
           A + PEEC + +Q+ T+TSQV WQ++IDPD+MTYEELLDLGE+VGT+SRGLS+E ISLLP
Sbjct: 121 AEAAPEEC-IQNQQNTNTSQVVWQEDIDPDNMTYEELLDLGEAVGTQSRGLSDELISLLP 180

Query: 181 TARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICN 240
           T++ K  SFFSRKK  ERCVICQMRYKRGD+QI LPCKH YH++CI+KWL INK+CP+CN
Sbjct: 181 TSKYKCGSFFSRKKSGERCVICQMRYKRGDRQINLPCKHVYHSECISKWLGINKVCPVCN 240

Query: 241 IEVFGDES 248
           +EV G+ES
Sbjct: 241 LEVSGEES 243

[Close]
BLAST of ClCG09G004210 vs. TrEMBL
Match: A0A061DWE7_THECC (RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_005889 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 9.7e-81
Identity = 154/247 (62.35%), Postives = 184/247 (74.49%), Query Frame = 1 

Query: 1   MNEDRQMEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60
           MN +RQMEVHY+DTGFPYT TESFMDFFEGL  H    Y + VP+ DQ N YWSM+M  Y
Sbjct: 1   MNGNRQMEVHYIDTGFPYTATESFMDFFEGL-THVPVNYTHTVPMQDQENIYWSMSMNAY 60

Query: 61  KFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDA 120
           KFG S   +T+Y   +  S HLP  +DV  R W+YP S +N E P         E VV  
Sbjct: 61  KFGFSGPESTFYS-PYEVSDHLP-RMDVSRRTWDYP-STLNSEEPATIDMQPGGEAVVGI 120

Query: 121 HSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180
           H+IPEEC  +HQ   S SQV WQD IDPD+MTYEELLDLGE++G++SRGLS+E I LLPT
Sbjct: 121 HAIPEECITNHQSN-SNSQVVWQDNIDPDNMTYEELLDLGETIGSQSRGLSQELIDLLPT 180

Query: 181 ARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI 240
           ++CK  SFFS K+  ERCVICQMRYKRG++Q+KLPCKH YH++CITKWL+INKICP+CN 
Sbjct: 181 SKCKFGSFFSTKR--ERCVICQMRYKRGEQQMKLPCKHVYHSQCITKWLSINKICPVCNN 240

Query: 241 EVFGDES 248
           EVFG+ES
Sbjct: 241 EVFGEES 240

[Close]
BLAST of ClCG09G004210 vs. TrEMBL
Match: V4TG92_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032570mg PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 6.3e-80
Identity = 150/247 (60.73%), Postives = 181/247 (73.28%), Query Frame = 1 

Query: 1   MNEDRQMEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60
           M   RQMEVHY+DTGF YTVTESFMDFFEGL  H    Y    P+ DQ N YWSMNM  Y
Sbjct: 1   MRVSRQMEVHYIDTGFAYTVTESFMDFFEGL-THAPVNYAQTGPIHDQENVYWSMNMHPY 60

Query: 61  KFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDA 120
           KFG S   + YY  S+  + HLP  ++   R WEY +++ NVE P  T   S  E V+  
Sbjct: 61  KFGFSGPESNYYYGSYEVNDHLP-RIEASRRTWEYASTMNNVE-PSTTDVQSEGEAVMGV 120

Query: 121 HSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180
           H+ PEEC   HQ  +++SQV WQD +DPD+MTYEELLDLGE+VGT+SRGLS+EQI+LLPT
Sbjct: 121 HTAPEECSPHHQS-SNSSQVVWQDNVDPDNMTYEELLDLGETVGTQSRGLSQEQINLLPT 180

Query: 181 ARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI 240
           ++ K  + F RK+  ERCVICQM+YKRGD+Q+KLPC+H YH++CITKWL INKICPICN 
Sbjct: 181 SKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINKICPICNN 240

Query: 241 EVFGDES 248
           EVFGDES
Sbjct: 241 EVFGDES 243

[Close]
BLAST of ClCG09G004210 vs. TrEMBL
Match: A0A067L4R8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16753 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 8.2e-80
Identity = 150/241 (62.24%), Postives = 179/241 (74.27%), Query Frame = 1 

Query: 7   MEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD 66
           MEVHY++TGFPYTVTESFMDFFEGL  H    Y +  P+ DQ NAYWSMNM  YK+G S 
Sbjct: 1   MEVHYINTGFPYTVTESFMDFFEGL-THVPVHYAHTGPVHDQENAYWSMNMNAYKYGFSG 60

Query: 67  HGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDAHSIPEE 126
            G+T Y + H E +   P +DVG   WEYP+  VN+E P      S  +  V  H+ PEE
Sbjct: 61  PGSTSY-YGHYEVNDNLPRMDVGRVAWEYPS--VNMEEPTTADTQSEGDAAVGVHTPPEE 120

Query: 127 CDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT 186
           C + +   + + Q  WQD++DPD+MTYEELLDLGE+VGT+SRGLSEE ISLLPT++CK  
Sbjct: 121 C-IPNPTSSDSPQGVWQDDVDPDNMTYEELLDLGETVGTQSRGLSEELISLLPTSKCKFG 180

Query: 187 SFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDE 246
            FFSRKK  ERCVICQMRYKRGDKQ+KLPCKH YH++CITKWL INKICP+CN EVFG+E
Sbjct: 181 GFFSRKKAGERCVICQMRYKRGDKQMKLPCKHVYHSECITKWLGINKICPVCNNEVFGEE 236

Query: 247 S 248
           S
Sbjct: 241 S 236

[Close]
BLAST of ClCG09G004210 vs. TAIR10
Match: AT3G63530.1 (AT3G63530.1 RING/U-box superfamily protein)

HSP 1 Score: 251.5 bits (641), Expect = 5.5e-67
Identity = 123/249 (49.40%), Postives = 164/249 (65.86%), Query Frame = 1 

Query: 1   MNEDRQM--EVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQ 60
           MN D +   + HY +TGFPY  T S+MDF+ G  Q  +  Y +A  +  Q N YW+MN  
Sbjct: 1   MNGDNRPVEDAHYTETGFPYAATGSYMDFYGGAAQGPLN-YDHAATMHPQDNLYWTMNTN 60

Query: 61  CYKFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVV 120
            YKFG S   N  +  S+  + HL   + +G   W+Y   V   + PE T A SV+    
Sbjct: 61  AYKFGFSGSDNASFYGSYDMNDHLS-RMSIGRTNWDYHPMVNVADDPENTVARSVQIGDT 120

Query: 121 DAHSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLL 180
           D HS  EEC ++++ +  + QV+WQD+IDPD MTYEEL++LGE+VGTESRGLS+E I  L
Sbjct: 121 DEHSEAEEC-IANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETL 180

Query: 181 PTARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPIC 240
           PT + K  S FSRK+  ERCVICQ++YK G++Q+ LPCKH YH++CI+KWL+INK+CP+C
Sbjct: 181 PTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVC 240

Query: 241 NIEVFGDES 248
           N EVFG+ S
Sbjct: 241 NSEVFGEPS 246

[Close]
BLAST of ClCG09G004210 vs. TAIR10
Match: AT3G19910.1 (AT3G19910.1 RING/U-box superfamily protein)

HSP 1 Score: 119.8 bits (299), Expect = 2.5e-27
Identity = 57/111 (51.35%), Postives = 76/111 (68.47%), Query Frame = 1 

Query: 132 QEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSR 191
           ++E+ TSQ  W DE+DPD ++YEELL LG+ VGTESRGLS + I+ LP+ R K     ++
Sbjct: 225 EDESHTSQDAW-DEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGD--NQ 284

Query: 192 KKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEV 243
               E CVIC++ Y+  +  I LPCKH YH++CI  WL INK+CP+C+ EV
Sbjct: 285 NGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEV 332

[Close]
BLAST of ClCG09G004210 vs. TAIR10
Match: AT5G52140.1 (AT5G52140.1 RING/U-box superfamily protein)

HSP 1 Score: 102.8 bits (255), Expect = 3.1e-22
Identity = 53/122 (43.44%), Postives = 73/122 (59.84%), Query Frame = 1 

Query: 130 SHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTAR--CKLTS 189
           +H   + +   T  +  DP++MTYEEL +LG+SVG   +GLS+E+IS L T +   K  S
Sbjct: 158 THSPSSISHNPTDDENNDPENMTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTKS 217

Query: 190 FFS---RKK---PEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 244
           ++    +KK    + +C IC M Y +GDK   LPCKH YH  CI++WL  NK+C IC  E
Sbjct: 218 WYCLHMKKKFVADDSQCSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAE 277

[Close]
BLAST of ClCG09G004210 vs. TAIR10
Match: AT3G47180.1 (AT3G47180.1 RING/U-box superfamily protein)

HSP 1 Score: 102.4 bits (254), Expect = 4.1e-22
Identity = 55/128 (42.97%), Postives = 78/128 (60.94%), Query Frame = 1 

Query: 113 VEEDVVDAHSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSE 172
           V+ED ++     +E + + +EE    +   +DEIDPD ++YEEL+ LG+ +G E+RGL+ 
Sbjct: 81  VDEDEINEFLEDQESNSNLEEEDDFLEE--EDEIDPDQLSYEELIALGDFIGVENRGLTP 140

Query: 173 EQISLLPTARCKLTSFFSRKKPE-ERCVICQMRYKRGDKQIKL-PCKHFYHNKCITKWLT 232
            +IS    A    T  FS  K E +RCV+CQM ++  +  + L PC H YH++CITKWL 
Sbjct: 141 IEISTCLNAS---TYVFSHNKNEIDRCVVCQMEFEERESLVVLRPCDHPYHSECITKWLE 200

Query: 233 INKICPIC 239
             KICPIC
Sbjct: 201 TKKICPIC 203

[Close]
BLAST of ClCG09G004210 vs. TAIR10
Match: AT4G31450.1 (AT4G31450.1 RING/U-box superfamily protein)

HSP 1 Score: 82.4 bits (202), Expect = 4.4e-16
Identity = 43/102 (42.16%), Postives = 57/102 (55.88%), Query Frame = 1 

Query: 146 IDPDHMTYEELLDLGESVGTESRGLSEEQIS---------LLPTARCKLTSFFSRKKPEE 205
           +D D+M+YEELL L E +GT S  L+EE IS         + P +   +T   S  K + 
Sbjct: 387 LDIDNMSYEELLALEERIGTVSTALTEEAISKCLKTSIYQMKPLSYGSITKSPSDNKEDA 446

Query: 206 RCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPIC 239
           +C ICQ  Y  GD+  +L C+H YH KC+ +WL I   CPIC
Sbjct: 447 KCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPIC 488

[Close]
BLAST of ClCG09G004210 vs. NCBI nr
Match: gi|659122706|ref|XP_008461282.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo])

HSP 1 Score: 513.1 bits (1320), Expect = 2.8e-142
Identity = 240/255 (94.12%), Postives = 247/255 (96.86%), Query Frame = 1 

Query: 1   MNEDRQMEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60
           MNEDRQME+HY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 61  KFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDA 120
           KFGVSDHGNTYYGHS  ESHHLPPS+DVGEREWEYPTS VNVEIPEP+YAPSVEEDVVDA
Sbjct: 61  KFGVSDHGNTYYGHSE-ESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDA 120

Query: 121 HSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180
           HSIPEECDLSH+EETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT
Sbjct: 121 HSIPEECDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180

Query: 181 ARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI 240
           ARCKLTSFFSRKK +ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI
Sbjct: 181 ARCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI 240

Query: 241 EVFGDESTNALGSDN 256
           EVFGD STNA  SDN
Sbjct: 241 EVFGDGSTNASASDN 254

[Close]
BLAST of ClCG09G004210 vs. NCBI nr
Match: gi|778728645|ref|XP_011659453.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER [Cucumis sativus])

HSP 1 Score: 511.9 bits (1317), Expect = 6.3e-142
Identity = 239/255 (93.73%), Postives = 247/255 (96.86%), Query Frame = 1 

Query: 1   MNEDRQMEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60
           MNEDRQME+HY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 61  KFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDA 120
           KFGVSDHGNTYYGHS  ESHHLPPS+DVGEREWEYPTS +NVEIPEP+YAPSVEEDVVDA
Sbjct: 61  KFGVSDHGNTYYGHSE-ESHHLPPSMDVGEREWEYPTSAMNVEIPEPSYAPSVEEDVVDA 120

Query: 121 HSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180
           HSIPEECDLSH+EETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT
Sbjct: 121 HSIPEECDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180

Query: 181 ARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI 240
           ARCKLTSFFSRKK +ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI
Sbjct: 181 ARCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI 240

Query: 241 EVFGDESTNALGSDN 256
           EVFGD STNA  SDN
Sbjct: 241 EVFGDGSTNASASDN 254

[Close]
BLAST of ClCG09G004210 vs. NCBI nr
Match: gi|659122710|ref|XP_008461284.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X2 [Cucumis melo])

HSP 1 Score: 500.7 bits (1288), Expect = 1.5e-138
Identity = 234/249 (93.98%), Postives = 241/249 (96.79%), Query Frame = 1 

Query: 7   MEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD 66
           ME+HY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD
Sbjct: 1   MELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD 60

Query: 67  HGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDAHSIPEE 126
           HGNTYYGHS  ESHHLPPS+DVGEREWEYPTS VNVEIPEP+YAPSVEEDVVDAHSIPEE
Sbjct: 61  HGNTYYGHSE-ESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDAHSIPEE 120

Query: 127 CDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT 186
           CDLSH+EETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT
Sbjct: 121 CDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT 180

Query: 187 SFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDE 246
           SFFSRKK +ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGD 
Sbjct: 181 SFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDG 240

Query: 247 STNALGSDN 256
           STNA  SDN
Sbjct: 241 STNASASDN 248

[Close]
BLAST of ClCG09G004210 vs. NCBI nr
Match: gi|700189901|gb|KGN45134.1| (hypothetical protein Csa_7G428220 [Cucumis sativus])

HSP 1 Score: 499.6 bits (1285), Expect = 3.3e-138
Identity = 233/249 (93.57%), Postives = 241/249 (96.79%), Query Frame = 1 

Query: 7   MEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD 66
           ME+HY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD
Sbjct: 1   MELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD 60

Query: 67  HGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDAHSIPEE 126
           HGNTYYGHS  ESHHLPPS+DVGEREWEYPTS +NVEIPEP+YAPSVEEDVVDAHSIPEE
Sbjct: 61  HGNTYYGHSE-ESHHLPPSMDVGEREWEYPTSAMNVEIPEPSYAPSVEEDVVDAHSIPEE 120

Query: 127 CDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT 186
           CDLSH+EETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT
Sbjct: 121 CDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT 180

Query: 187 SFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDE 246
           SFFSRKK +ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGD 
Sbjct: 181 SFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDG 240

Query: 247 STNALGSDN 256
           STNA  SDN
Sbjct: 241 STNASASDN 248

[Close]
BLAST of ClCG09G004210 vs. NCBI nr
Match: gi|802555649|ref|XP_012065554.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X2 [Jatropha curcas])

HSP 1 Score: 312.8 bits (800), Expect = 5.7e-82
Identity = 154/247 (62.35%), Postives = 184/247 (74.49%), Query Frame = 1 

Query: 1   MNEDRQMEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60
           MN +RQMEVHY++TGFPYTVTESFMDFFEGL  H    Y +  P+ DQ NAYWSMNM  Y
Sbjct: 1   MNGNRQMEVHYINTGFPYTVTESFMDFFEGL-THVPVHYAHTGPVHDQENAYWSMNMNAY 60

Query: 61  KFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDA 120
           K+G S  G+T Y + H E +   P +DVG   WEYP+  VN+E P      S  +  V  
Sbjct: 61  KYGFSGPGSTSY-YGHYEVNDNLPRMDVGRVAWEYPS--VNMEEPTTADTQSEGDAAVGV 120

Query: 121 HSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180
           H+ PEEC + +   + + Q  WQD++DPD+MTYEELLDLGE+VGT+SRGLSEE ISLLPT
Sbjct: 121 HTPPEEC-IPNPTSSDSPQGVWQDDVDPDNMTYEELLDLGETVGTQSRGLSEELISLLPT 180

Query: 181 ARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI 240
           ++CK   FFSRKK  ERCVICQMRYKRGDKQ+KLPCKH YH++CITKWL INKICP+CN 
Sbjct: 181 SKCKFGGFFSRKKAGERCVICQMRYKRGDKQMKLPCKHVYHSECITKWLGINKICPVCNN 240

Query: 241 EVFGDES 248
           EVFG+ES
Sbjct: 241 EVFGEES 242

The following BLAST results are available for this feature:
BLAST of ClCG09G004210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BB_ARATH9.7e-6649.40E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1 SV=1[more]
BBR_ARATH4.4e-2651.35E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1[more]
MBR2_ARATH5.0e-1440.86E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana GN=MBR2 PE=1 SV=1[more]
HIP1_ORYSJ1.9e-1341.94Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica GN=HIP... [more]
MBR1_ARATH4.3e-1344.00E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana GN=MBR1 PE=1 SV=1[more]
BLAST of ClCG09G004210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8C4_CUCSA2.3e-13893.57Uncharacterized protein OS=Cucumis sativus GN=Csa_7G428220 PE=4 SV=1[more]
M5X1N2_PRUPE2.6e-8162.50Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010554mg PE=4 SV=1[more]
A0A061DWE7_THECC9.7e-8162.35RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_005889 PE=4 S... [more]
V4TG92_9ROSI6.3e-8060.73Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032570mg PE=4 SV=1[more]
A0A067L4R8_JATCU8.2e-8062.24Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16753 PE=4 SV=1[more]
BLAST of ClCG09G004210 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G63530.15.5e-6749.40 RING/U-box superfamily protein[more]
AT3G19910.12.5e-2751.35 RING/U-box superfamily protein[more]
AT5G52140.13.1e-2243.44 RING/U-box superfamily protein[more]
AT3G47180.14.1e-2242.97 RING/U-box superfamily protein[more]
AT4G31450.14.4e-1642.16 RING/U-box superfamily protein[more]
BLAST of ClCG09G004210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659122706|ref|XP_008461282.1|2.8e-14294.12PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo][more]
gi|778728645|ref|XP_011659453.1|6.3e-14293.73PREDICTED: E3 ubiquitin ligase BIG BROTHER [Cucumis sativus][more]
gi|659122710|ref|XP_008461284.1|1.5e-13893.98PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X2 [Cucumis melo][more]
gi|700189901|gb|KGN45134.1|3.3e-13893.57hypothetical protein Csa_7G428220 [Cucumis sativus][more]
gi|802555649|ref|XP_012065554.1|5.7e-8262.35PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X2 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
GO:0046621negative regulation of organ growth
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046621 negative regulation of organ growth
biological_process GO:0016567 protein ubiquitination
biological_process GO:0044707 single-multicellular organism process
biological_process GO:0044767 single-organism developmental process
biological_process GO:0048437 floral organ development
biological_process GO:0008285 negative regulation of cell proliferation
biological_process GO:1900057 positive regulation of leaf senescence
biological_process GO:0051865 protein autoubiquitination
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0031624 ubiquitin conjugating enzyme binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G004210.1ClCG09G004210.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 197..239
score: 6.7
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 198..238
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 198..239
score: 11
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 194..242
score: 7.5
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 39..79
score: 2.3E-83coord: 98..246
score: 2.3
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 194..244
score: 2.59

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG09G004210Csa7G428220Cucumber (Chinese Long) v2cuwcgB516
ClCG09G004210MELO3C023546Melon (DHL92) v3.5.1mewcgB164
ClCG09G004210Cla015236Watermelon (97103) v1wcgwmB007
ClCG09G004210Cla97C09G166490Watermelon (97103) v2wcgwmbB035
ClCG09G004210Bhi09G000526Wax gourdwcgwgoB070
ClCG09G004210CSPI07G19300Wild cucumber (PI 183967)cpiwcgB543
ClCG09G004210Cucsa.127830Cucumber (Gy14) v1cgywcgB209
ClCG09G004210CmoCh08G005210Cucurbita moschata (Rifu)cmowcgB780
ClCG09G004210Lsi02G025800Bottle gourd (USVL1VR-Ls)lsiwcgB156
ClCG09G004210Cp4.1LG17g08140Cucurbita pepo (Zucchini)cpewcgB286
ClCG09G004210CsGy7G017660Cucumber (Gy14) v2cgybwcgB475
ClCG09G004210MELO3C023546.2Melon (DHL92) v3.6.1medwcgB156
ClCG09G004210Carg13446Silver-seed gourdcarwcgB0440
ClCG09G004210CsaV3_7G031110Cucumber (Chinese Long) v3cucwcgB537
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG09G004210Cucurbita pepo (Zucchini)cpewcgB126
ClCG09G004210Cucurbita pepo (Zucchini)cpewcgB130
ClCG09G004210Cucurbita pepo (Zucchini)cpewcgB280
ClCG09G004210Cucurbita pepo (Zucchini)cpewcgB482
ClCG09G004210Cucurbita pepo (Zucchini)cpewcgB543
ClCG09G004210Bottle gourd (USVL1VR-Ls)lsiwcgB214
ClCG09G004210Bottle gourd (USVL1VR-Ls)lsiwcgB217
ClCG09G004210Melon (DHL92) v3.6.1medwcgB308
ClCG09G004210Silver-seed gourdcarwcgB0345
ClCG09G004210Silver-seed gourdcarwcgB0346
ClCG09G004210Silver-seed gourdcarwcgB0442
ClCG09G004210Silver-seed gourdcarwcgB0736
ClCG09G004210Cucumber (Chinese Long) v3cucwcgB187
ClCG09G004210Watermelon (97103) v2wcgwmbB006
ClCG09G004210Watermelon (97103) v2wcgwmbB009
ClCG09G004210Wax gourdwcgwgoB009
ClCG09G004210Wax gourdwcgwgoB011
ClCG09G004210Wax gourdwcgwgoB064
ClCG09G004210Watermelon (Charleston Gray)wcgwcgB006
ClCG09G004210Cucumber (Gy14) v1cgywcgB208
ClCG09G004210Cucurbita maxima (Rimu)cmawcgB219
ClCG09G004210Cucurbita maxima (Rimu)cmawcgB306
ClCG09G004210Cucurbita maxima (Rimu)cmawcgB310
ClCG09G004210Cucurbita maxima (Rimu)cmawcgB384
ClCG09G004210Cucurbita maxima (Rimu)cmawcgB779
ClCG09G004210Cucurbita moschata (Rifu)cmowcgB204
ClCG09G004210Cucurbita moschata (Rifu)cmowcgB299
ClCG09G004210Cucurbita moschata (Rifu)cmowcgB303
ClCG09G004210Wild cucumber (PI 183967)cpiwcgB183
ClCG09G004210Cucumber (Chinese Long) v2cuwcgB180
ClCG09G004210Melon (DHL92) v3.5.1mewcgB313
ClCG09G004210Watermelon (97103) v1wcgwmB015
ClCG09G004210Watermelon (97103) v1wcgwmB016