ClCG09G000540 (gene) Watermelon (Charleston Gray)

Overview
NameClCG09G000540
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRwd domain-containing protein, putative
LocationCG_Chr09 : 459162 .. 467656 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAAAACCAAGGGCAACAAGGGCTTTTATAGTTTATTTCATCTGTCTTATTTTCACTTTTTCTTCCAGCCCTTTCCCCCTCAAACTCGAAAAGATTCCCACATTATATTTGGTTTTCTTTACCAAATCCCATAGGGATAGAGCTGAAGGACTTCCTTATGCTGAGCAGTAATTTTTAGGTCTTCAGTAGCTCAGTGACTGTGATTGCATCTCAGCGACGCCAGGAAGAGGAGTGAGCGGAATCCAATTATAGCAGCCATGACTGGTACGTAATTTCCCTTATCCAACTACTTTCAGATTCACCTTAATGTTAAGGAAATTCGGAAGTGTTTTATGTAGCCTTCCTTTATCAGAATACGGATTCTTTCCTCTCGTCTGTGCTTAAGCTCTGACTTTTGCTAGTATTTTTCACCTGATCATATAAGTATGTCTATGGGTTCTTGCTATATTTACTCATCTGGTTACTGCTAGTATTCTGCTTTGTGGGTACGTTAACGATTTCGACCAGCTGCAGATTGAATGATTTTCAAATCGTGAAAGTTTTGTGATGTGGGCTTCATGATTTTTTTTTTTTTTTTTTTTTTTTGAACTTTTCTCTCGTGGTCGATAGACTTAATGAAATTGTCTCCCGAAGGGGCTGGGCGAGAGCATTGGGATTTCGATGGAGACAGCAGAAGTCTAGAAGTCCGATCACCAGCATATACTTTATAGTATAGTGCATTCATATCTTGATTTGGTAACGTGCGTGTGATCGCAAGCATATACTGCACTTTGCCTATGATCACCAGCAGAACTTGAATTTATAGGTCTTCATTAGCACAGTTCCTTTATATTTTGCTTTGACAAAGTTATTCCTGTTTCTGGATAAAATTAAGAAAAAAAAGACTTGTTAATGTGCTTGAAGTAATGCAAGATTACACGACTTGAATAATAACATGGGTGTGATTGGATAACATACAATCCTATACTTCAATATCTAATGAATTGATGTGTGTGCACGCCTATATAGTGGATGATATTTTGTCAGGATTTTTCATATGTCCCCATTAATTTCAACTGTTTACATTCTATTCGGCTTGCAGACTATGCACAGGAGCAGGAGATGGAAATTGAAGCATTGGAAGCTATACTTATGGATGAGTTCAAAGGTTTGTGACACATTTGTCTCTTAGAATTCAAAGTGCTTCGCTACCTTTTCTCTGGTCTAACATGTCAGATGCCCTTTTCTTTCTTTATTCCATATCAGAAATACACCCAAGTGAGAGTGGCCTAAACACTTCTGGCAGATGCTTTCAAATAACACTGTCTCCACAGGTACGTGTCTCTGTTTTCCACCTGTTCTACTTTTGCTGCTTGGTAAGCAATAAGCATCCTGCTTAGTACTTATAATAAGTGATATGCTAGTTTCTGAAATGAACAGGATATTATATTTGTGCCAACTCTCTTTTCCTCTTTAAAGAAGGGAGGAAGATAGGGGGAGCACAATGGTTGAAAATTTTGGATATATCTACTCACTGTGAACAACTTAGCTTTGGAATAGGTACAAATAGATTTGAGTTCTATTATTTCTTGGTTATTTAAGACTTAATTCAAACTAAAACCTTTGAAACAAGCTTTTTGAATTCCTTGGAGCAGTTCAACTACATTTCAAATATTATGGTAAATCTTCTATAGTGGCCATTGGTGAGAATCAGTTCATATGAGTCTTATTACATTAATTCTGCCCTTGATTTAATAGTTATCAATTTGCTTTGTGATTTTTGAGAAATTTTCATTATGAAAGATTAGGCCCTATTATAATTCAGAGTTATTTGCTTGCTTGCATGATTGTCAGCAAATAAGTTGACCTACTGTACCTTATGATCTTATGTTCGCTTCCTTTGTCGTTTTCAATAGGATGATGAGGCAGATGAATCAACAAATATGCCAGGTTATTCTTACTTAAGTTGCCTTACTAATAGATACACCTAGATAAACTATTTTCTTACTGTCCTAATATAGGATCAGTTATTTATTTGGTAGTAAGCTCTTGCCCCAAACTTTTGTGCAGTTCAGCTGGGTTTGATTTTCTCACATACAGAGAAATATCCTGATGAACCTCCACTTTTGAATGTGAAAAGGTTGTATTATTATGCTATGCATGTAAATACTTATGTGAATCCTAAGTATCCTTTACTTCTGTAATTCGAAATAAACAGAAAAAATTCATCTAAGTTGCCTAGTTAGGTTGTGGATCTTGATTTCTTGACTCATCCAAGCGACACATTAAGGATTGTTTGGTAGGCAATTTAGATTTAGTTTTATATTTTTGGATTTTCTGAATTTAGTGAATATGTGTTTGACATATGTGTTTTTGATAATTGTTTTCAAATCTATGATCCAAATGCTGTAAATTTTGAAAACAACATTTTTTATGTGTTCATTGTATCCAAATTTTGAATTTTGAAAGTTTAAAATACATATTTATATGAAAAGTTCAAAACTTTAAATGAAATATTGTATTTCATGTTATAAACTTAATTCATTCTGGTTAAACTAAAATATGCATATATAATGTATTATAAATTATTTGATATTGGAAAATAATAATAATTCAAAATTCTTAACCTAAAACATGTTCATAAATTAATTAATAATAGTCTATATTCAACCTAATATTTAGTGGACTACAATTAGTTTTATGATTTATAAATGTATTATATCAAACACATCTTGAACAATTGTTTAAATTGGGACCAATTTTTAAATATGCTATCAAATACATATATGAAAAAATGAAATACAACTTTGTTTTTATTGAACTCTTTGTTTTCAAATTTCTGTTTTTAGATTTGCTTAAAGACAAACCTTAAGTTATTTGGGTTAAAAAATATTCTACTCTTTAGTATAATAATATATTGATTTTTGGCTTTATTGCTTTGTTGTTTAGTATTAGAGGAATCCCGGGAGAAGATATAAAGATTTTGAGAGCAAAGCTTCAGCAAGAGGTATTTTCTTTAATTAAAATAGCTATCACACATCAGTAGCATTTAAGCTTGTATTCTTTCTTTTTTTTTTTTCCAATGAAAGCTTTGTTACCAAAGAGAGAAAAAAGAAAAAAAATGGAATATATCAATTTACCCCTAAACTTTGGGATGATGAGAAACTTGTACTTATGTTAATAGTTGATAATGTGGTTTATCTGAATATCTGACATTTACATTTAGTATATTTGGACAGGCATCTGAAAATCTTGGTATGGCTATGATCTACACACTTGTCACATCATCTAAAGAGTGGCTATCTGAGCGATTTGGTCAAGAGAGTAGTCTTGAGATAGCTGAAGCAGAAGAGAGGGCAAAAGAAGATGTACGAATCTCTATTTTTATCTCCTATTATTAGTTTTTTTCATAAAGAAAGATTTTTTATTTGCTTTCAGTTACTTTTGTGATTCATTGTTAATTATACTTTTGGATTGGAAATGTAGTCTGTGTCTAGAAATTTTTAGGGGCTATTGTGTCTGAGACCAAAATCTTAGTAGGTTGTTGTAATTTACCTTTTTATAAGAAACCCTTACAATTTACATCAACAGCTGCTCAAGTACAAACGAAAAAGATGAGCATCCTCCAAAAACGTCAAAGAGCTTTTAAAAAGGGTTTTCAATTGACAGAAATGAAATCACAAAAGGCATTATAAATACCAGTTTCTTTGTACATACTACAAGTAGAAACAAAAAACTTGAAAATTTTCATATATAAACTGTCTTATTCTTTTCCTCAAAGATTCTTCTGTTCCTTTCTACATTGTTTCCCAAAGAAGAGCTTCCACTGACTTGGTCCGTAAGACTTTAGCCTTATTTATGAACAAATTGATATTTGGAGTGAAATCAATAGGAAAACACCTTCAAACTCCAAAAGCCTTTAACAACCTATACCAACATTCAGAACTGAGAGCAGGACCAGAGATAAATGGATTGGATCCTCACGACTTCTTTTACACAGGGCACAGCAACTTGGAAAATATACATATATTTGTAAATGTACATATATGTTATTTTCTGCTTGATCCTCTTTATTACAGACATTATTGCATGTGGAGATAATTTTTGATAAGAGACAAAAGAATATATTAATGAAATCAGATCGTACAAAAAAGGTGGGAACGGTGGGAACTACTTTTCAGATGAAATTTTACTGATGCTGAAACTAACGAGGAGATTGTTCTCCAAGGTCTTGTTGAGCCCATTCAAACATGGAGGATACTGAACAGTGAACCCTTTAAAGAGAGGAGATTTCCACACCGTGCTCCTTCAAGATTCCCAATTAGCCATAATATAAACAAGGTCCTAATTATAAAAAATCTATGAAGAGTGCTAGACGAAAGAAAAATGTATAATTCACCATCAGATACCAAACTGCCAATCCCTCCCCACTGTTATGCATCACCTCATATTTATCAACATGATGCCCTAACCTATGCTTGATGATTTAGACTTTATACACTCATTTAGTAATTAACTTAAACTAAATTTGAATTGATGAGTTCTCACTATGTTATGTAATATGTTTACTTAAGGCTAGTGTGCTACTGCCATTGCTCCTTGTTGCAGGATGGTGATATTTCTTTTTAACTAAGTTTGTAGCATATTGTTAACAAAAAACTTCATACTAGGTCTCGTTACTTGTTAAATTTTTTATGGTGGCATTTATTGTATATTTGTGATGAGTACTGCAAGTTTTATTTATTTATGTTTCTCTCTCTCTCTCTAATAAAAGAACCATGCTTTCATTGAGATAGATGAAAGGATATGCAAGGGCATAAATAAAACAAATTAAAAAATACAATGAAAGTGGGCTGGTTTTTCATTTACATTTTATTCTATAGGCGTCGTGTTGTATAGTTGGAGTCCCTTCTTATAGAGGGTTCTCTTCTTTTTGTGCGCTGGTTTTTGTTGCCCTTGTATTCTCTCATTTTCCCTCAATGAGATTGGATGTTCCATAAAAAGAACAAATTAGAAAAATATGACAACCTCTACACCCGATTACAGAAAGGAGGGGTCCCAATCCAAAAGAATTGGGCTAAATTGATAATTACAAAAGATGGTATTAGTATTAACAGATGCCTACGAAGACAAATTAAATCTAATTGTATCCCAAAGTTCCTCCCAGACCTCTCCACCCCATGGAAAATTCTACTGTTCTTCTCAAGCCAAATGCCTCAAAGGAATTAAATCTAATTGTATCCCAGAGTTCCTCTCCAGACCTCTCCTCCCCATGGAAAATTCTGATGTTCTTCTCAAGCCAAATGCCGCACAGCATAGCGAGAGAGAGAAAAAAAAAAAGGAAAAAACTGCCAAAGAACACATCCTTTGAATTTTATTTATTTATGTTACATTCTGGATTTGATGGCATATGTTAGTCTATATTTTAAAATATTTGGCCGTTGAACATTACTTGAATGAATTCATTTACATTCTGCTTCTTTGATCTCGCAGGTAATTGTACCACATGGAGAACCTGTCACCCTAGACACATTTTTAGCATGGAGGGAAAGATTTGAAGCAGAGATTGCACTGGAACGAGCCAAGTAATTTATTTTTTCATCTCTTGCTTTGCCCCCCGCCCCCAACCACCCGCACAACAACAACAGTAGCAATTTGACCATAGTTGTCTTTGTGAAGGATAGGGTAGTCTCAGGTGTAGTTTTGCTAGTAGCGTCCAAAACATATGCTGTTGACTATCCCAACATGGTTGAAGTTATCCAATGCCTTTCTTGGATGAATCTCAATCTTAGTGTAGTGAAGGGGTGGTTCACCGTGGATATAGCAATGAAGTGGATCGCTCTGTCTAAAGTTCTAATGGAGGTAGCTTCACTTCCTATAGACTGGATGTCAGATTATGGTCACTGGAAACTGTGGGGGTTCTGTTAGCAGATCTCTGTATGATTTTTTAGGCAGTCTATAGGGTGTTAACTTTAGATGTGGCTTATATGCGAGTTTGCAGTTTGTAGGACCTTCCTATAAGTCTGTGTTTGGAAGAATGCTTCCTTGCAGGACTTGAGAAGAAATTCAAATGGCCAAGAGGCTAGCAGGATTCTTTTGGGAGAAGAGAGATTGTTTTCATTCAGCATATTGTTAATTGCCAGATTCCTGTGGAAGGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTGTGTGTGTGTGTGTAAGAACCTGTGGGAAGTTTTTAAGCAAAAGAATATGCAATGAGAATGTCAGAAAAACATGAAGGTCTTTCCAGGCTTCTTTATATGCGTTCTGGGTGGAGCATCAAACAGAGGATTTGGACCACCTTTTTTATTCACTTGATTTTTGTCAGATCCCTTTGTGAAGATTGTGAGCGGGGCTGCCTTTGATCTTTTATGGTTGGCACCCCCTTAGAGACTTTTGGTTTTAGCCCAACACTAAGATACCGAGGCCCAAATTTTGTGGATCATTTCTGCCCTTTCCTCTTTGTGGGAATGAGATTGAAACGAATGGATGTATGTAACAGTAAAAAGGAAAATGCAAGGGTATATTGAAACTACGCTTTACAAATGGAAAATAAGGACAATGAGAAAGTCCTATTTACAAAAAACAAAAAGTTTACCAAAAGGGCTCTGGTTGTTGAGAATAGGAGCTAAAGAAGGATCACAAAAGCTAATCTTCAAATCTGCATAACTTCTGAACTTGTAGTTCACACTACGTATAAAACCATCTAAATGAGTTGATAAGTAATAGTATTTTGATATGTACTTCCTATTATTAGTCCTGATCCTAACCAGGCTACAAAAAGTTAGTCCTGATCCCTAGTCTAGGCAAATCCATTATTGATCCAATCTGGAAATGTTAGCTAGTGACTAACATTTACCTTTAGCAGCTCTATTGGATAATTCAATAGATAAAGACGGGTTGTCTCTTGGAATTCTTTGGGGAATTTGGGTGCTAGTTGAGTTTCAAAATAATAATAATAATAATCTTAAAAAAAAAAAAAGTTGGTGCTAGTTAATACTTACGAAATGGTGCAGCTAACAGCTTTATGTCTGTCTCTGGCTGGCTAACACTTTAAACGTTTTTATCTTTAAATTTTGTCTAGTTATGGAGCTTTTCTTTTGTAATTTGCCTAGTCTTGAGATTGAATGGTCCCTAGTTTGCTCCTCCCGTTTTGTACATGTCATTTGATCAACATATTTGTATTGTATCTAACTGGTTTCAAGAAGTCATATTTTACGTTCAACTTTTTTCTTTGTTAATGAATATGAACTTCTTTCAGGATAATGCCCGAATCGGCTCTTACTGCACCTAAGGAAAAGAAACTTACTGGCAGGCAGTGGTTTGAGAGTGGACGAGCTTCGGCGGTAATTTTTCTTGTCATTGCTAGAATGGAAATATCGAACAACTGACTATTTTATCCTATGACACAGTTCATATACTGTTGATTCTCCTGTTAGCCGGAGCTTCTGCTTCATTCAACTTAATGTCTCTCTCTTTTTCTGACAGAAAGGTGCAGCCCCAGTTACTGAAGGATCTGACGAAGAAGACGAGGAAGATATTGACTTTGATGAGGATGATTTTGAAGGTGCTTTCGCCCCCTCTCCCACTTTACTCTCTCATTCATCTAATCAACAGTTAATAATACTAAATCATTCAGTTGTTAGCATTAATCCATACCAAATGAACATCCCTTTGCATTGCTTGGATTGCAGACGATGAGGAAGACATGCTTGAGCATTATCTGGCTGAGAAGTCAGATTCGTCCTCTCACTCTTCCAGAAGGCCTTAGTTATAAATCAGTTCATTTGCTTCATTATATGAATGGATATCAAATTTTGGCTTGTAATCTTAGTTGAAACCAGGATGACAATTTTTCCATTTATACAACTTTTTTTTATTCAGTTATGATGAAATGAGAGCACTGATGATCTTGGAAGTTGGCATTTCCTTGTTTTGGTTAGAGAGAAAGCTAGTGGAGGCAGTCAATTAATGAG

mRNA sequence

ATAAAAACCAAGGGCAACAAGGGCTTTTATAGTTTATTTCATCTGTCTTATTTTCACTTTTTCTTCCAGCCCTTTCCCCCTCAAACTCGAAAAGATTCCCACATTATATTTGGTTTTCTTTACCAAATCCCATAGGGATAGAGCTGAAGGACTTCCTTATGCTGAGCAGTAATTTTTAGGTCTTCAGTAGCTCAGTGACTGTGATTGCATCTCAGCGACGCCAGGAAGAGGAGTGAGCGGAATCCAATTATAGCAGCCATGACTGACTATGCACAGGAGCAGGAGATGGAAATTGAAGCATTGGAAGCTATACTTATGGATGAGTTCAAAGAAATACACCCAAGTGAGAGTGGCCTAAACACTTCTGGCAGATGCTTTCAAATAACACTGTCTCCACAGGATGATGAGGCAGATGAATCAACAAATATGCCAGTTCAGCTGGGTTTGATTTTCTCACATACAGAGAAATATCCTGATGAACCTCCACTTTTGAATGTGAAAAGTATTAGAGGAATCCCGGGAGAAGATATAAAGATTTTGAGAGCAAAGCTTCAGCAAGAGGCATCTGAAAATCTTGGTATGGCTATGATCTACACACTTGTCACATCATCTAAAGAGTGGCTATCTGAGCGATTTGGTCAAGAGAGTAGTCTTGAGATAGCTGAAGCAGAAGAGAGGGCAAAAGAAGATGTAATTGTACCACATGGAGAACCTGTCACCCTAGACACATTTTTAGCATGGAGGGAAAGATTTGAAGCAGAGATTGCACTGGAACGAGCCAAGATAATGCCCGAATCGGCTCTTACTGCACCTAAGGAAAAGAAACTTACTGGCAGGCAGTGGTTTGAGAGTGGACGAGCTTCGGCGAAAGGTGCAGCCCCAGTTACTGAAGGATCTGACGAAGAAGACGAGGAAGATATTGACTTTGATGAGGATGATTTTGAAGACGATGAGGAAGACATGCTTGAGCATTATCTGGCTGAGAAGTCAGATTCGTCCTCTCACTCTTCCAGAAGGCCTTAGTTATAAATCAGTTCATTTGCTTCATTATATGAATGGATATCAAATTTTGGCTTGTAATCTTAGTTGAAACCAGGATGACAATTTTTCCATTTATACAACTTTTTTTTATTCAGTTATGATGAAATGAGAGCACTGATGATCTTGGAAGTTGGCATTTCCTTGTTTTGGTTAGAGAGAAAGCTAGTGGAGGCAGTCAATTAATGAG

Coding sequence (CDS)

ATGACTGACTATGCACAGGAGCAGGAGATGGAAATTGAAGCATTGGAAGCTATACTTATGGATGAGTTCAAAGAAATACACCCAAGTGAGAGTGGCCTAAACACTTCTGGCAGATGCTTTCAAATAACACTGTCTCCACAGGATGATGAGGCAGATGAATCAACAAATATGCCAGTTCAGCTGGGTTTGATTTTCTCACATACAGAGAAATATCCTGATGAACCTCCACTTTTGAATGTGAAAAGTATTAGAGGAATCCCGGGAGAAGATATAAAGATTTTGAGAGCAAAGCTTCAGCAAGAGGCATCTGAAAATCTTGGTATGGCTATGATCTACACACTTGTCACATCATCTAAAGAGTGGCTATCTGAGCGATTTGGTCAAGAGAGTAGTCTTGAGATAGCTGAAGCAGAAGAGAGGGCAAAAGAAGATGTAATTGTACCACATGGAGAACCTGTCACCCTAGACACATTTTTAGCATGGAGGGAAAGATTTGAAGCAGAGATTGCACTGGAACGAGCCAAGATAATGCCCGAATCGGCTCTTACTGCACCTAAGGAAAAGAAACTTACTGGCAGGCAGTGGTTTGAGAGTGGACGAGCTTCGGCGAAAGGTGCAGCCCCAGTTACTGAAGGATCTGACGAAGAAGACGAGGAAGATATTGACTTTGATGAGGATGATTTTGAAGACGATGAGGAAGACATGCTTGAGCATTATCTGGCTGAGAAGTCAGATTCGTCCTCTCACTCTTCCAGAAGGCCTTAG

Protein sequence

MTDYAQEQEMEIEALEAILMDEFKEIHPSESGLNTSGRCFQITLSPQDDEADESTNMPVQLGLIFSHTEKYPDEPPLLNVKSIRGIPGEDIKILRAKLQQEASENLGMAMIYTLVTSSKEWLSERFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPESALTAPKEKKLTGRQWFESGRASAKGAAPVTEGSDEEDEEDIDFDEDDFEDDEEDMLEHYLAEKSDSSSHSSRRP
Homology
[Close]
BLAST of ClCG09G000540 vs. Swiss-Prot
Match: RWDD1_MOUSE (RWD domain-containing protein 1 OS=Mus musculus GN=Rwdd1 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 9.4e-29
Identity = 93/258 (36.05%), Postives = 138/258 (53.49%), Query Frame = 1 

Query: 1   MTDYAQEQEMEIEALEAILMDEFKEIHPSESGLNTSGRCFQITLSPQDDEADESTNMPVQ 60
           MTDY +EQ  E+EALE+I  D F       + L+ S   F IT++ +  E DE+    VQ
Sbjct: 1   MTDYGEEQRNELEALESIYPDSF-------TVLSESPPSFTITVTSEAGENDET----VQ 60

Query: 61  LGLIFSHTEKYPDEPPLLNVKSIRGIPGEDIKILRAKLQQEASENLGMAMIYTLVTSSKE 120
             L F+++EKYPDE PL  + S   +   D+  +   L  +A ENLGM MI+TLVT+ +E
Sbjct: 61  TTLKFTYSEKYPDETPLYEIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAVQE 120

Query: 121 WLSE-------RFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALER 180
            L+E       R  +E   +  EAEE  K+   + HG PVT++ FL+W+ +F+AE+   +
Sbjct: 121 KLNEIVDQIKTRREEEKKQKEKEAEEAEKK---LFHGTPVTIENFLSWKAKFDAELLEIK 180

Query: 181 AKIMPESALTAPKEKKLTGRQWFESGRASAKGAAPVTE--GSDEEDEEDI--DFDEDDFE 240
            K M E       + KL+G+Q FE+            E  G++ E +E +  + D+ + E
Sbjct: 181 KKRMKEEEQAG--KNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQEMDDLELE 240

Query: 241 DDEEDMLEHYLAEKSDSS 248
           D E+D   + +A  SDSS
Sbjct: 241 DGEDDPDYNPVAPGSDSS 242

[Close]
BLAST of ClCG09G000540 vs. Swiss-Prot
Match: RWDD1_RAT (RWD domain-containing protein 1 OS=Rattus norvegicus GN=Rwdd1 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.1e-28
Identity = 92/258 (35.66%), Postives = 138/258 (53.49%), Query Frame = 1 

Query: 1   MTDYAQEQEMEIEALEAILMDEFKEIHPSESGLNTSGRCFQITLSPQDDEADESTNMPVQ 60
           MTDY +EQ  E+EALE+I  D F       + L+ +   F IT++ +  E DE+    VQ
Sbjct: 1   MTDYGEEQRNELEALESIYPDSF-------TVLSENPPSFTITVTSEAGENDET----VQ 60

Query: 61  LGLIFSHTEKYPDEPPLLNVKSIRGIPGEDIKILRAKLQQEASENLGMAMIYTLVTSSKE 120
             L F+++EKYPDE PL  + S   +   D+  +   L  +A ENLGM MI+TLVT+ +E
Sbjct: 61  TTLKFTYSEKYPDEAPLYEIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAVQE 120

Query: 121 WLSE-------RFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALER 180
            L+E       R  +E   +  EAEE  K+   + HG PVT++ FL+W+ +F+AE+   +
Sbjct: 121 KLNEIVDQIKTRREEEKKQKEKEAEEAEKK---LFHGTPVTIENFLSWKAKFDAELLEIK 180

Query: 181 AKIMPESALTAPKEKKLTGRQWFESGRASAKGAAPVTE--GSDEEDEEDI--DFDEDDFE 240
            K M E       + KL+G+Q FE+            E  G++ E +E +  + D+ + E
Sbjct: 181 KKRMKEEEQAG--KNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQEMDDLELE 240

Query: 241 DDEEDMLEHYLAEKSDSS 248
           D E+D   + +A  SDSS
Sbjct: 241 DGEDDPDYNPVAPGSDSS 242

[Close]
BLAST of ClCG09G000540 vs. Swiss-Prot
Match: RWDD1_HUMAN (RWD domain-containing protein 1 OS=Homo sapiens GN=RWDD1 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.7e-28
Identity = 91/258 (35.27%), Postives = 137/258 (53.10%), Query Frame = 1 

Query: 1   MTDYAQEQEMEIEALEAILMDEFKEIHPSESGLNTSGRCFQITLSPQDDEADESTNMPVQ 60
           MTDY +EQ  E+EALE+I  D F       + L+ +   F IT++ +  E DE+    VQ
Sbjct: 1   MTDYGEEQRNELEALESIYPDSF-------TVLSENPPSFTITVTSEAGENDET----VQ 60

Query: 61  LGLIFSHTEKYPDEPPLLNVKSIRGIPGEDIKILRAKLQQEASENLGMAMIYTLVTSSKE 120
             L F+++EKYPDE PL  + S   +   D+  +   L  +A ENLGM MI+TLVT+ +E
Sbjct: 61  TTLKFTYSEKYPDEAPLYEIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAVQE 120

Query: 121 WLSE-------RFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALER 180
            L+E       R  +E   +  EAEE  K+   + HG PVT++ FL W+ +F+AE+   +
Sbjct: 121 KLNEIVDQIKTRREEEKKQKEKEAEEAEKQ---LFHGTPVTIENFLNWKAKFDAELLEIK 180

Query: 181 AKIMPESALTAPKEKKLTGRQWFESGRASAKGAAPVTE--GSDEEDEEDI--DFDEDDFE 240
            K M E       + KL+G+Q FE+            E  G++ E +E +  + D+ + E
Sbjct: 181 KKRMKEEEQAG--KNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQEMDDLELE 240

Query: 241 DDEEDMLEHYLAEKSDSS 248
           DDE+D   +    +SDS+
Sbjct: 241 DDEDDPDYNPADPESDSA 242

[Close]
BLAST of ClCG09G000540 vs. Swiss-Prot
Match: YCF9_SCHPO (RWD domain-containing protein C1393.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1393.09c PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 6.6e-14
Identity = 71/211 (33.65%), Postives = 106/211 (50.24%), Query Frame = 1 

Query: 9   EMEIEALEAILMDEFKEIHPSESGLNTSGRCFQITLSPQDDEADESTNMPVQLGLIFSH- 68
           E E E LE+I  +EFK I+ S          F+IT  P D E     N P    LIF+  
Sbjct: 6   EEEREILESIYPEEFKCINDST---------FEIT-QPIDREESNCDNPP---SLIFTCQ 65

Query: 69  -TEKYPDEPPLLNVKSIRGIPG---EDIKILRAKLQQEASENLGMAMIYTLVTSSKEWLS 128
            +E YPDE P + +      P    E+I+ L+  + Q A E LGMAMI++L + +KE  +
Sbjct: 66  LSEAYPDEVPDVKITFSEPHPWLGEEEIERLKQVVAQNAEECLGMAMIFSLCSVAKEETN 125

Query: 129 ERFGQESSLEIAEAEER----AKEDVIVPHGEPVTLDTFLAWRERFEA----EIALERAK 188
               ++S  E    EER    A+++    HG PVT+++F  W++ F+A    ++ LE+  
Sbjct: 126 AILIEQSQRETQAIEERHRKEAEQENKKFHGTPVTVESFTEWKKGFDAWRNEQLKLEQES 185

Query: 189 IMPE--------SALTAPKEKKLTGRQWFES 199
            + E        +A  A  EK++TGR+ FE+
Sbjct: 186 KLKEALSAASSSNARKAILEKRMTGRELFEN 203

[Close]
BLAST of ClCG09G000540 vs. Swiss-Prot
Match: GIR2_YEAST (Protein GIR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIR2 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-09
Identity = 70/270 (25.93%), Postives = 112/270 (41.48%), Query Frame = 1 

Query: 3   DYAQEQEMEIEALEAILMDEFKEIHPS--------------ESGLNTSGRCFQITL---- 62
           DY +EQ+ E+E LE+I  DE + I+                ++G +TS    + T+    
Sbjct: 2   DYKEEQKQELEVLESIYPDELRIINDEYPKIKFEVAIKLELDTGDSTSVLTKEHTIIAEF 61

Query: 63  ------------------------SPQDDEADESTNMPVQLGLIFSHTEKYPDEPPLLNV 122
                                   + +D+E DE        G      +K+ + P L++ 
Sbjct: 62  KLPENYPDEPCLISLEAQEVALNDNEEDNEEDEDEVEYDDHGN--KVLKKFENLPDLISF 121

Query: 123 KSIRGIPGEDIKILRAKLQQEASENLGMAMIYTLVTSSKE----WLSERFGQESSLEIAE 182
           K    +P   +++   + Q E    LGM M + L++S KE    W SE+  +       E
Sbjct: 122 KGY--LPELTVQL---ESQIETDMLLGMQMCFALISSIKERCEQWYSEQLNKLEKQYELE 181

Query: 183 AEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIAL-ERAKIMPESALTAPKEKKLTGRQW 226
           A+ER K++    HG  VT +++L WR +F  E+ L ER ++    A       KLTG+Q 
Sbjct: 182 AQEREKKEQAKFHGTKVTRESYLEWRSKFRQELKLDERDQVRRMKA----HHGKLTGKQM 241

[Close]
BLAST of ClCG09G000540 vs. TrEMBL
Match: A0A0A0K775_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G451950 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 8.3e-133
Identity = 243/255 (95.29%), Postives = 247/255 (96.86%), Query Frame = 1 

Query: 1   MTDYAQEQEMEIEALEAILMDEFKEIHPSESGLNTSGRCFQITLSPQDDEADESTNMPVQ 60
           MTDYAQEQEMEIEALEAILMDEFKEIH SESGLNTS RCFQITLSPQDDE DEST MPVQ
Sbjct: 1   MTDYAQEQEMEIEALEAILMDEFKEIHSSESGLNTSSRCFQITLSPQDDETDESTIMPVQ 60

Query: 61  LGLIFSHTEKYPDEPPLLNVKSIRGIPGEDIKILRAKLQQEASENLGMAMIYTLVTSSKE 120
           LGLIFSHTEKYPDEPPLLNVKSIRGIPGED+KIL+ KLQQEASENLGMAM+YTLVTSSKE
Sbjct: 61  LGLIFSHTEKYPDEPPLLNVKSIRGIPGEDLKILKEKLQQEASENLGMAMVYTLVTSSKE 120

Query: 121 WLSERFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPES 180
           WLSERFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPES
Sbjct: 121 WLSERFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPES 180

Query: 181 ALTAPKEKKLTGRQWFESGRASAKGAAPVTEGSDEEDEEDIDFDEDDFE-DDEEDMLEHY 240
           ALTAPKEKKL GRQWFESGRAS KGAAPVTEGSDE+DEEDIDFDEDDFE DDEEDMLEHY
Sbjct: 181 ALTAPKEKKLAGRQWFESGRASGKGAAPVTEGSDEDDEEDIDFDEDDFEDDDEEDMLEHY 240

Query: 241 LAEKSDSSSHSSRRP 255
           LAEKSDSSSHSSRRP
Sbjct: 241 LAEKSDSSSHSSRRP 255

[Close]
BLAST of ClCG09G000540 vs. TrEMBL
Match: A0A0B0NJ46_GOSAR (RWD domain-containing 1 OS=Gossypium arboreum GN=F383_11670 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 9.3e-116
Identity = 207/253 (81.82%), Postives = 230/253 (90.91%), Query Frame = 1 

Query: 1   MTDYAQEQEMEIEALEAILMDEFKEIHPSESGLNTSGRCFQITLSPQDDEADESTNMPVQ 60
           MTD+ QEQEMEIEALEAILMDEFKEIH  ESGLNTS RCFQITLSPQDD+ D+ST +PV 
Sbjct: 1   MTDHLQEQEMEIEALEAILMDEFKEIHSGESGLNTSNRCFQITLSPQDDDTDQSTTLPVL 60

Query: 61  LGLIFSHTEKYPDEPPLLNVKSIRGIPGEDIKILRAKLQQEASENLGMAMIYTLVTSSKE 120
           L LIFSHTEKYPDEPPLLNVKSIRGI   D+K+L+ KL+QEASENLGMAMIYTLVTS+KE
Sbjct: 61  LALIFSHTEKYPDEPPLLNVKSIRGIQVSDLKVLKEKLEQEASENLGMAMIYTLVTSAKE 120

Query: 121 WLSERFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPES 180
           WLSER+GQ+   +  E EE  K++VI+PHGEPVT+DTFLAWRERFEAE+ALERAK+MPES
Sbjct: 121 WLSERYGQDVDADNVEEEESTKDEVIIPHGEPVTVDTFLAWRERFEAELALERAKLMPES 180

Query: 181 ALTAPKEKKLTGRQWFESGRASAKGAAPVTEGSDEEDEEDIDFDEDDFEDDEEDMLEHYL 240
           ALTAPKEKKL+GRQWFESGRA+AKGAA V E SDEEDEEDIDFD+DDFEDDEEDMLEHYL
Sbjct: 181 ALTAPKEKKLSGRQWFESGRATAKGAARVNEESDEEDEEDIDFDDDDFEDDEEDMLEHYL 240

Query: 241 AEKSDSSSHSSRR 254
           AEKSDSS+HSS+R
Sbjct: 241 AEKSDSSTHSSKR 253

[Close]
BLAST of ClCG09G000540 vs. TrEMBL
Match: F6HY38_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g02540 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 6.0e-115
Identity = 204/251 (81.27%), Postives = 232/251 (92.43%), Query Frame = 1 

Query: 3   DYAQEQEMEIEALEAILMDEFKEIHPSESGLNTSGRCFQITLSPQDDEADESTNMPVQLG 62
           DY QEQEMEIEAL+AILMD+FKEI PSESGLNTS RCFQITLSPQ+DEADE+T +PVQL 
Sbjct: 10  DYVQEQEMEIEALQAILMDDFKEIDPSESGLNTSNRCFQITLSPQEDEADEATTIPVQLA 69

Query: 63  LIFSHTEKYPDEPPLLNVKSIRGIPGEDIKILRAKLQQEASENLGMAMIYTLVTSSKEWL 122
           LIFSHTEKYPDEPP LN KS+RGI  ED++ L+ KL+QEASENLGMAM+YTLVTS++EWL
Sbjct: 70  LIFSHTEKYPDEPPHLNFKSLRGIQYEDLRNLKEKLEQEASENLGMAMVYTLVTSAQEWL 129

Query: 123 SERFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPESAL 182
           SERFGQ++++E +E EE  K+D+IVPHGEPVT++TFLAWRERFEAE+ALERAK+MPESAL
Sbjct: 130 SERFGQDANVENSEEEETEKDDIIVPHGEPVTVETFLAWRERFEAELALERAKLMPESAL 189

Query: 183 TAPKEKKLTGRQWFESGRASAKGAAPVTEGSDEEDEEDIDFDEDDFEDDEEDMLEHYLAE 242
           TAPKEKKL+GRQWFESGRA AKGA PV E SDEED+EDIDFD+DDFEDDEEDMLEHYLAE
Sbjct: 190 TAPKEKKLSGRQWFESGRAVAKGAVPVNEESDEEDDEDIDFDDDDFEDDEEDMLEHYLAE 249

Query: 243 KSDSSSHSSRR 254
           KSDSS+HSSRR
Sbjct: 250 KSDSSTHSSRR 260

[Close]
BLAST of ClCG09G000540 vs. TrEMBL
Match: B9RQ64_RICCO (Rwd domain-containing protein, putative OS=Ricinus communis GN=RCOM_1485400 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 3.9e-114
Identity = 205/253 (81.03%), Postives = 233/253 (92.09%), Query Frame = 1 

Query: 1   MTDYAQEQEMEIEALEAILMDEFKEIHPSESGLNTSGRCFQITLSPQDDEADESTNMPVQ 60
           MTDY QEQEMEIEALEAILMDEFKEIH SESGLNTS RCF IT+SPQDD+A++ST++PVQ
Sbjct: 1   MTDYGQEQEMEIEALEAILMDEFKEIHSSESGLNTSNRCFHITISPQDDDAEDSTDIPVQ 60

Query: 61  LGLIFSHTEKYPDEPPLLNVKSIRGIPGEDIKILRAKLQQEASENLGMAMIYTLVTSSKE 120
           L LIFSHTEKYPDEPPLL+VKSIRGI   D+K+L+ KL++EASENLGMAM+YTLVTS+KE
Sbjct: 61  LALIFSHTEKYPDEPPLLSVKSIRGIQVGDLKVLKEKLEEEASENLGMAMVYTLVTSAKE 120

Query: 121 WLSERFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPES 180
           WLSE++GQ++S E  E EE AK++VIVPHGEPVT+DTFLAWRERFEAE+ALERAK+MPES
Sbjct: 121 WLSEKYGQDASNETIEDEEAAKDEVIVPHGEPVTIDTFLAWRERFEAELALERAKLMPES 180

Query: 181 ALTAPKEKKLTGRQWFESGRASAKGAAPVTEGSDEEDEEDIDFDEDDFEDDEEDMLEHYL 240
            LTAPKEKK++GRQWFESGR  AKGAA V E SDEEDEE+IDFD+DDFEDDEEDMLEHYL
Sbjct: 181 VLTAPKEKKISGRQWFESGR--AKGAATVNEESDEEDEEEIDFDDDDFEDDEEDMLEHYL 240

Query: 241 AEKSDSSSHSSRR 254
           AEKSDSS+HSSRR
Sbjct: 241 AEKSDSSTHSSRR 251

[Close]
BLAST of ClCG09G000540 vs. TrEMBL
Match: A0A0D2MJX3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G060200 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 8.7e-114
Identity = 203/250 (81.20%), Postives = 227/250 (90.80%), Query Frame = 1 

Query: 1   MTDYAQEQEMEIEALEAILMDEFKEIHPSESGLNTSGRCFQITLSPQDDEADESTNMPVQ 60
           MTD+ QEQEMEIEALEAILMDEFKEIH  ESGLNTS RCFQITLSPQDD+ D+ST +PV 
Sbjct: 1   MTDHLQEQEMEIEALEAILMDEFKEIHSGESGLNTSNRCFQITLSPQDDDTDQSTTLPVL 60

Query: 61  LGLIFSHTEKYPDEPPLLNVKSIRGIPGEDIKILRAKLQQEASENLGMAMIYTLVTSSKE 120
           L LIFSHTEKYPDEPPLLNVKSIRGI   D+K+L+ KL+QEASENLGMAMIYTLVTS+K+
Sbjct: 61  LALIFSHTEKYPDEPPLLNVKSIRGIQVSDLKVLKEKLEQEASENLGMAMIYTLVTSAKD 120

Query: 121 WLSERFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPES 180
           WLSER+GQ++  +  E EE  K++VI+PHGEPVT+DTFLAWRERFEAE+ALERAK+MPES
Sbjct: 121 WLSERYGQDADADNVEEEESTKDEVIIPHGEPVTVDTFLAWRERFEAELALERAKLMPES 180

Query: 181 ALTAPKEKKLTGRQWFESGRASAKGAAPVTEGSDEEDEEDIDFDEDDFEDDEEDMLEHYL 240
           ALTAPKEKKL+GRQWFESGRA+AKGAA V E SDEEDEEDIDFD+DDFEDDEEDMLEHYL
Sbjct: 181 ALTAPKEKKLSGRQWFESGRATAKGAARVNEESDEEDEEDIDFDDDDFEDDEEDMLEHYL 240

Query: 241 AEKSDSSSHS 251
           AEKSD S+HS
Sbjct: 241 AEKSDLSTHS 250

[Close]
BLAST of ClCG09G000540 vs. TAIR10
Match: AT1G51730.1 (AT1G51730.1 Ubiquitin-conjugating enzyme family protein)

HSP 1 Score: 376.3 bits (965), Expect = 1.5e-104
Identity = 187/253 (73.91%), Postives = 215/253 (84.98%), Query Frame = 1 

Query: 1   MTDYAQEQEMEIEALEAILMDEFKEIHPSESGLNTSGRCFQITLSPQDDEADESTNMPVQ 60
           MT+Y QEQEMEIEALEAILMDEFKEIH SESGLNTS RCFQIT++PQDDE +E    PVQ
Sbjct: 1   MTEYKQEQEMEIEALEAILMDEFKEIHSSESGLNTSNRCFQITVTPQDDELEELAIPPVQ 60

Query: 61  LGLIFSHTEKYPDEPPLLNVKSIRGIPGEDIKILRAKLQQEASENLGMAMIYTLVTSSKE 120
           L L+FSHTE YPDE PLL+VKSIRGI   D+ IL+ KL+QEASENLGMAMIYTLV+S+K+
Sbjct: 61  LALVFSHTENYPDEAPLLDVKSIRGIHVSDLTILKEKLEQEASENLGMAMIYTLVSSAKD 120

Query: 121 WLSERFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPES 180
           WLSE +GQ+ + E AE E   +++VIVPHGEPVTL+TFLAWRER+EAE+ALERAK+MPES
Sbjct: 121 WLSEHYGQDDAAEFAEVEAAKEDEVIVPHGEPVTLETFLAWRERYEAELALERAKLMPES 180

Query: 181 ALTAPKEKKLTGRQWFESGRASAKGAAPVTEGSD-EEDEEDIDFDEDDFEDDEEDMLEHY 240
           ALTAPKEKKLTGRQWFESGR   +G   + +  D EEDEEDIDF+++DFEDDEEDMLEHY
Sbjct: 181 ALTAPKEKKLTGRQWFESGR--GRGTVVIADEEDEEEDEEDIDFEDEDFEDDEEDMLEHY 240

Query: 241 LAEKSDSSSHSSR 253
           LAEKSDSS+  +R
Sbjct: 241 LAEKSDSSAPPTR 251

[Close]
BLAST of ClCG09G000540 vs. NCBI nr
Match: gi|659124830|ref|XP_008462370.1| (PREDICTED: RWD domain-containing protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 488.8 bits (1257), Expect = 5.7e-135
Identity = 246/255 (96.47%), Postives = 250/255 (98.04%), Query Frame = 1 

Query: 1   MTDYAQEQEMEIEALEAILMDEFKEIHPSESGLNTSGRCFQITLSPQDDEADESTNMPVQ 60
           MTDYAQEQEMEIEALEAILMDEFKEIH SESGLNTSGRCFQITLSPQDDE DESTNMPVQ
Sbjct: 1   MTDYAQEQEMEIEALEAILMDEFKEIHSSESGLNTSGRCFQITLSPQDDETDESTNMPVQ 60

Query: 61  LGLIFSHTEKYPDEPPLLNVKSIRGIPGEDIKILRAKLQQEASENLGMAMIYTLVTSSKE 120
           LGLIFSHTEKYPDEPPLLNVKSIRGIPGED+KIL+ KLQQEASENLGMAM+YTLVTSSKE
Sbjct: 61  LGLIFSHTEKYPDEPPLLNVKSIRGIPGEDLKILKEKLQQEASENLGMAMVYTLVTSSKE 120

Query: 121 WLSERFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPES 180
           WLSERFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPES
Sbjct: 121 WLSERFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPES 180

Query: 181 ALTAPKEKKLTGRQWFESGRASAKGAAPVTEGSDEEDEEDIDFDEDDFE-DDEEDMLEHY 240
           ALTAPKEKKLTGRQWFESGRAS KGAAPVTEGSDE+DEEDIDFDEDDFE DDEEDMLEHY
Sbjct: 181 ALTAPKEKKLTGRQWFESGRASGKGAAPVTEGSDEDDEEDIDFDEDDFEDDDEEDMLEHY 240

Query: 241 LAEKSDSSSHSSRRP 255
           LAEKSDSSSHSSRRP
Sbjct: 241 LAEKSDSSSHSSRRP 255

[Close]
BLAST of ClCG09G000540 vs. NCBI nr
Match: gi|449447836|ref|XP_004141673.1| (PREDICTED: RWD domain-containing protein 1 [Cucumis sativus])

HSP 1 Score: 481.1 bits (1237), Expect = 1.2e-132
Identity = 243/255 (95.29%), Postives = 247/255 (96.86%), Query Frame = 1 

Query: 1   MTDYAQEQEMEIEALEAILMDEFKEIHPSESGLNTSGRCFQITLSPQDDEADESTNMPVQ 60
           MTDYAQEQEMEIEALEAILMDEFKEIH SESGLNTS RCFQITLSPQDDE DEST MPVQ
Sbjct: 1   MTDYAQEQEMEIEALEAILMDEFKEIHSSESGLNTSSRCFQITLSPQDDETDESTIMPVQ 60

Query: 61  LGLIFSHTEKYPDEPPLLNVKSIRGIPGEDIKILRAKLQQEASENLGMAMIYTLVTSSKE 120
           LGLIFSHTEKYPDEPPLLNVKSIRGIPGED+KIL+ KLQQEASENLGMAM+YTLVTSSKE
Sbjct: 61  LGLIFSHTEKYPDEPPLLNVKSIRGIPGEDLKILKEKLQQEASENLGMAMVYTLVTSSKE 120

Query: 121 WLSERFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPES 180
           WLSERFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPES
Sbjct: 121 WLSERFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPES 180

Query: 181 ALTAPKEKKLTGRQWFESGRASAKGAAPVTEGSDEEDEEDIDFDEDDFE-DDEEDMLEHY 240
           ALTAPKEKKL GRQWFESGRAS KGAAPVTEGSDE+DEEDIDFDEDDFE DDEEDMLEHY
Sbjct: 181 ALTAPKEKKLAGRQWFESGRASGKGAAPVTEGSDEDDEEDIDFDEDDFEDDDEEDMLEHY 240

Query: 241 LAEKSDSSSHSSRRP 255
           LAEKSDSSSHSSRRP
Sbjct: 241 LAEKSDSSSHSSRRP 255

[Close]
BLAST of ClCG09G000540 vs. NCBI nr
Match: gi|1009112020|ref|XP_015866212.1| (PREDICTED: RWD domain-containing protein 1 [Ziziphus jujuba])

HSP 1 Score: 446.8 bits (1148), Expect = 2.5e-122
Identity = 222/253 (87.75%), Postives = 239/253 (94.47%), Query Frame = 1 

Query: 2   TDYAQEQEMEIEALEAILMDEFKEIHPSESGLNTSGRCFQITLSPQDDEAD-ESTNMPVQ 61
           TDY QEQEMEIEALEAILMDEFKEIH  ESGLNTS RCFQITLSPQDDEAD EST +PVQ
Sbjct: 11  TDYTQEQEMEIEALEAILMDEFKEIHSGESGLNTSNRCFQITLSPQDDEADYESTTLPVQ 70

Query: 62  LGLIFSHTEKYPDEPPLLNVKSIRGIPGEDIKILRAKLQQEASENLGMAMIYTLVTSSKE 121
           LGLIF+HTEKYPDEPPLLNVKS+RGI  ED++IL+ KLQQEASENLGMAMIYTLVTS+KE
Sbjct: 71  LGLIFAHTEKYPDEPPLLNVKSLRGIQAEDLRILKEKLQQEASENLGMAMIYTLVTSAKE 130

Query: 122 WLSERFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPES 181
           WLSERFGQ+SS+E A+AEE AKED++VPHGEPVT++TFLAWRERFEAE+ALERAK+MPES
Sbjct: 131 WLSERFGQDSSIEGAQAEEAAKEDIVVPHGEPVTVETFLAWRERFEAELALERAKLMPES 190

Query: 182 ALTAPKEKKLTGRQWFESGRASAKGAAPVTEGSDEEDEEDIDFDEDDFEDDEEDMLEHYL 241
           ALTAPKEKKLTGRQWFESGRASAKGAA VTEGSDEEDEEDI FD+DD EDDEEDMLEHYL
Sbjct: 191 ALTAPKEKKLTGRQWFESGRASAKGAAQVTEGSDEEDEEDIYFDDDDLEDDEEDMLEHYL 250

Query: 242 AEKSDSSSHSSRR 254
           AEKSDSSSHSSRR
Sbjct: 251 AEKSDSSSHSSRR 263

[Close]
BLAST of ClCG09G000540 vs. NCBI nr
Match: gi|1009112055|ref|XP_015866374.1| (PREDICTED: RWD domain-containing protein 1-like [Ziziphus jujuba])

HSP 1 Score: 432.2 bits (1110), Expect = 6.4e-118
Identity = 215/245 (87.76%), Postives = 232/245 (94.69%), Query Frame = 1 

Query: 10  MEIEALEAILMDEFKEIHPSESGLNTSGRCFQITLSPQDDEAD-ESTNMPVQLGLIFSHT 69
           MEIEALEAILMDEFKEIH  ESGLNTS RCFQITLSPQDDEAD EST +PVQLGLIF+HT
Sbjct: 1   MEIEALEAILMDEFKEIHSGESGLNTSNRCFQITLSPQDDEADYESTTLPVQLGLIFAHT 60

Query: 70  EKYPDEPPLLNVKSIRGIPGEDIKILRAKLQQEASENLGMAMIYTLVTSSKEWLSERFGQ 129
           EKYPDEPPLLNVKS+RGI  ED++IL+ KLQQEASENLGMAMIYTLVTS+KEWLSERFGQ
Sbjct: 61  EKYPDEPPLLNVKSLRGIQAEDLRILKEKLQQEASENLGMAMIYTLVTSAKEWLSERFGQ 120

Query: 130 ESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPESALTAPKEK 189
           +SS+E A+AEE AKED++VPHGEPVT++TFLAWRERFEAE+ALERAK+MPESALTAPKEK
Sbjct: 121 DSSIEGAQAEEAAKEDIVVPHGEPVTVETFLAWRERFEAELALERAKLMPESALTAPKEK 180

Query: 190 KLTGRQWFESGRASAKGAAPVTEGSDEEDEEDIDFDEDDFEDDEEDMLEHYLAEKSDSSS 249
           KLTGRQWFESGRASAKGAA VTEGSDEEDEEDI FD+DD EDDEEDMLEHYLAEKSDSSS
Sbjct: 181 KLTGRQWFESGRASAKGAAQVTEGSDEEDEEDIYFDDDDLEDDEEDMLEHYLAEKSDSSS 240

Query: 250 HSSRR 254
           HSSRR
Sbjct: 241 HSSRR 245

[Close]
BLAST of ClCG09G000540 vs. NCBI nr
Match: gi|720019872|ref|XP_010262224.1| (PREDICTED: RWD domain-containing protein 1 isoform X2 [Nelumbo nucifera])

HSP 1 Score: 430.6 bits (1106), Expect = 1.9e-117
Identity = 212/253 (83.79%), Postives = 232/253 (91.70%), Query Frame = 1 

Query: 1   MTDYAQEQEMEIEALEAILMDEFKEIHPSESGLNTSGRCFQITLSPQDDEADESTNMPVQ 60
           MTDY QEQEMEIEAL+AILMDEFKEI  SESGLNTS RCFQITLSPQDD+ADE+   PVQ
Sbjct: 1   MTDYVQEQEMEIEALQAILMDEFKEIDSSESGLNTSNRCFQITLSPQDDDADEARTTPVQ 60

Query: 61  LGLIFSHTEKYPDEPPLLNVKSIRGIPGEDIKILRAKLQQEASENLGMAMIYTLVTSSKE 120
           L LIFSHTEKYPDEPP+L VKSIRGIP  D+K+L+ KL+QEASENLGMAMIYTLVTS+KE
Sbjct: 61  LALIFSHTEKYPDEPPVLIVKSIRGIPAADLKVLKEKLEQEASENLGMAMIYTLVTSAKE 120

Query: 121 WLSERFGQESSLEIAEAEERAKEDVIVPHGEPVTLDTFLAWRERFEAEIALERAKIMPES 180
           WL ERFGQ++ +   E E+ AK+D+IVPHGEPVT+DTFLAWRERFEAE+ALERAK+MPES
Sbjct: 121 WLGERFGQDAGVSETEEEDTAKDDIIVPHGEPVTVDTFLAWRERFEAELALERAKLMPES 180

Query: 181 ALTAPKEKKLTGRQWFESGRASAKGAAPVTEGSDEEDEEDIDFDEDDFEDDEEDMLEHYL 240
           ALTAPKEKKLTGRQWFESGRA AKGA PVTEGSDEEDEEDIDFD+DDFEDDEEDMLEHYL
Sbjct: 181 ALTAPKEKKLTGRQWFESGRA-AKGAMPVTEGSDEEDEEDIDFDDDDFEDDEEDMLEHYL 240

Query: 241 AEKSDSSSHSSRR 254
           AEKSD+SSHSSRR
Sbjct: 241 AEKSDTSSHSSRR 252

The following BLAST results are available for this feature:
BLAST of ClCG09G000540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RWDD1_MOUSE9.4e-2936.05RWD domain-containing protein 1 OS=Mus musculus GN=Rwdd1 PE=1 SV=1[more]
RWDD1_RAT2.1e-2835.66RWD domain-containing protein 1 OS=Rattus norvegicus GN=Rwdd1 PE=2 SV=1[more]
RWDD1_HUMAN4.7e-2835.27RWD domain-containing protein 1 OS=Homo sapiens GN=RWDD1 PE=1 SV=1[more]
YCF9_SCHPO6.6e-1433.65RWD domain-containing protein C1393.09c OS=Schizosaccharomyces pombe (strain 972... [more]
GIR2_YEAST2.2e-0925.93Protein GIR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIR2 PE... [more]
BLAST of ClCG09G000540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K775_CUCSA8.3e-13395.29Uncharacterized protein OS=Cucumis sativus GN=Csa_7G451950 PE=4 SV=1[more]
A0A0B0NJ46_GOSAR9.3e-11681.82RWD domain-containing 1 OS=Gossypium arboreum GN=F383_11670 PE=4 SV=1[more]
F6HY38_VITVI6.0e-11581.27Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g02540 PE=4 SV=... [more]
B9RQ64_RICCO3.9e-11481.03Rwd domain-containing protein, putative OS=Ricinus communis GN=RCOM_1485400 PE=4... [more]
A0A0D2MJX3_GOSRA8.7e-11481.20Uncharacterized protein OS=Gossypium raimondii GN=B456_003G060200 PE=4 SV=1[more]
BLAST of ClCG09G000540 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G51730.11.5e-10473.91 Ubiquitin-conjugating enzyme family protein[more]
BLAST of ClCG09G000540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659124830|ref|XP_008462370.1|5.7e-13596.47PREDICTED: RWD domain-containing protein 1 isoform X1 [Cucumis melo][more]
gi|449447836|ref|XP_004141673.1|1.2e-13295.29PREDICTED: RWD domain-containing protein 1 [Cucumis sativus][more]
gi|1009112020|ref|XP_015866212.1|2.5e-12287.75PREDICTED: RWD domain-containing protein 1 [Ziziphus jujuba][more]
gi|1009112055|ref|XP_015866374.1|6.4e-11887.76PREDICTED: RWD domain-containing protein 1-like [Ziziphus jujuba][more]
gi|720019872|ref|XP_010262224.1|1.9e-11783.79PREDICTED: RWD domain-containing protein 1 isoform X2 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006575RWD-domain
IPR016135UBQ-conjugating_enzyme/RWD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016579 protein deubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0002181 cytoplasmic translation
cellular_component GO:0005575 cellular_component
cellular_component GO:0005844 polysome
molecular_function GO:0005515 protein binding
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0016874 ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G000540.1ClCG09G000540.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006575RWD domainPFAMPF05773RWDcoord: 6..121
score: 1.7
IPR006575RWD domainSMARTSM00591RWD2001bcoord: 10..125
score: 1.4
IPR006575RWD domainPROFILEPS50908RWDcoord: 10..125
score: 2
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 1..128
score: 7.2
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 1..124
score: 2.06
NoneNo IPR availableunknownCoilCoilcoord: 5..25
scor
NoneNo IPR availablePANTHERPTHR12292RWD DOMAIN-CONTAINING PROTEINcoord: 1..249
score: 6.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG09G000540Csa7G451950Cucumber (Chinese Long) v2cuwcgB524
ClCG09G000540MELO3C024403Melon (DHL92) v3.5.1mewcgB174
ClCG09G000540Cla015599Watermelon (97103) v1wcgwmB007
ClCG09G000540Cla97C09G162460Watermelon (97103) v2wcgwmbB035
ClCG09G000540Bhi09G000321Wax gourdwcgwgoB068
ClCG09G000540CSPI07G22990Wild cucumber (PI 183967)cpiwcgB553
ClCG09G000540Cucsa.360690Cucumber (Gy14) v1cgywcgB610
ClCG09G000540CmaCh17G007390Cucurbita maxima (Rimu)cmawcgB308
ClCG09G000540CmaCh08G007580Cucurbita maxima (Rimu)cmawcgB778
ClCG09G000540CmoCh08G007250Cucurbita moschata (Rifu)cmowcgB779
ClCG09G000540CmoCh17G007090Cucurbita moschata (Rifu)cmowcgB301
ClCG09G000540Lsi02G029520Bottle gourd (USVL1VR-Ls)lsiwcgB160
ClCG09G000540Cp4.1LG12g08750Cucurbita pepo (Zucchini)cpewcgB128
ClCG09G000540Cp4.1LG17g05110Cucurbita pepo (Zucchini)cpewcgB284
ClCG09G000540CsGy7G021270Cucumber (Gy14) v2cgybwcgB484
ClCG09G000540MELO3C024403.2Melon (DHL92) v3.6.1medwcgB168
ClCG09G000540Carg09474Silver-seed gourdcarwcgB1002
ClCG09G000540Carg18743Silver-seed gourdcarwcgB0723
ClCG09G000540CsaV3_7G034910Cucumber (Chinese Long) v3cucwcgB546
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG09G000540Melon (DHL92) v3.6.1medwcgB301
ClCG09G000540Melon (DHL92) v3.6.1medwcgB442
ClCG09G000540Silver-seed gourdcarwcgB0119
ClCG09G000540Silver-seed gourdcarwcgB0189
ClCG09G000540Cucumber (Chinese Long) v3cucwcgB190
ClCG09G000540Cucumber (Chinese Long) v3cucwcgB276
ClCG09G000540Watermelon (97103) v2wcgwmbB029
ClCG09G000540Wax gourdwcgwgoB029
ClCG09G000540Wax gourdwcgwgoB075
ClCG09G000540Watermelon (Charleston Gray)wcgwcgB022
ClCG09G000540Watermelon (Charleston Gray)wcgwcgB032
ClCG09G000540Cucumber (Gy14) v1cgywcgB578
ClCG09G000540Cucurbita maxima (Rimu)cmawcgB010
ClCG09G000540Cucurbita maxima (Rimu)cmawcgB218
ClCG09G000540Cucurbita maxima (Rimu)cmawcgB383
ClCG09G000540Cucurbita moschata (Rifu)cmowcgB203
ClCG09G000540Cucurbita moschata (Rifu)cmowcgB381
ClCG09G000540Wild cucumber (PI 183967)cpiwcgB186
ClCG09G000540Wild cucumber (PI 183967)cpiwcgB276
ClCG09G000540Cucumber (Chinese Long) v2cuwcgB182
ClCG09G000540Cucumber (Chinese Long) v2cuwcgB268
ClCG09G000540Melon (DHL92) v3.5.1mewcgB307
ClCG09G000540Melon (DHL92) v3.5.1mewcgB448
ClCG09G000540Watermelon (97103) v1wcgwmB027
ClCG09G000540Watermelon (97103) v1wcgwmB030
ClCG09G000540Cucurbita pepo (Zucchini)cpewcgB481
ClCG09G000540Cucurbita pepo (Zucchini)cpewcgB542
ClCG09G000540Bottle gourd (USVL1VR-Ls)lsiwcgB255
ClCG09G000540Bottle gourd (USVL1VR-Ls)lsiwcgB386
ClCG09G000540Cucumber (Gy14) v2cgybwcgB170
ClCG09G000540Cucumber (Gy14) v2cgybwcgB248