ClCG08G015620 (gene) Watermelon (Charleston Gray)

NameClCG08G015620
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr08 : 28118247 .. 28120962 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTCCCTCCGCTGGCTGCGTCTGAAAATTTCCTCTCTGACGATGCATTCTCACTGCCAATCTCAGGTTCTCTAACTTTCTTTCTCTTTATTATTATTGATTTAGGAAAGAATTTTGATATGTTTTTGCTGCGGTCTTACGTGTTCTTCCTTTCGTTTGCTTCCCTGTTCTTGATTTTATTGCTTGTGTTGATGTTTGGCTTTAATTTCTTAAGGAAATCGTTTTAACTGTTTCCGTCGCGTCATCAATGCTGCAGTTGGATCTTCATTGTTCTCGATGATCGTTGGAGGTTTTATTCTTGAAGATTTAGTGTGAATTTCACAGAATCGGATCTCTCTGTACGTATCTATCTTTTGCATCTTCATCTTTACGTTCAATCAAATTCTTTTTGCTTGATCATGAATGTCTATTTGATCTGGTTTCAAATTTCGCTTCTCTGTAATTGGAATTACTTTCCCGTTCCGTTTCTGAATTTAGTATACAACTTTCTTGAAAGGAATCGATGAAGATGACATTCTTGAAGATTCATTGTGAAATATCACAGAATCGATCTCTCAGTACGTCGCGATATTTTCGTCTTTTCTTTCCGTTGAATCAAAATTTTGCTTGATCTTGTGTATTTCTTGATCATGAACTTCAATTTTATTTGGTTTCAAACATGGCTTTTCTGCAACTGGAATCACTGTTGCTCTCCGTTTCTGAATCGAGTATTCAACTTACATGAATGGAATCGATGAAGATTGTTCGAGGTTTTGTTCTAGAGGATTGATTGTGAAATGACACAGAATGGATCTCTCAGTACGTATCGATCTTTTTCTTCTTTTCTTTACGTTCAATCAAATTAGTTTTGCTTAATCTTGTGTATATCTTGATCATGAACTTCGATTTGATCTGGTTTTCAAATTTGGCTTTTCTGCAACTGGAATTACTTTTGCGCTCCATTTCTGAATTTGGTATTTAACTTTCATGAAAGGAATCAATGACGATCGTTCGAGGTTTTACTCTTGAAGATTGAGGGTGAAATGTCACAGAGTCGATGGTCTTCTGTGCGTATCGATCTTTTTTACCTTTTATTTATGCTCAATCCTCAATCAATTTCCTTTTGCTCATAAAAGGAAAGAGGTCAATGTTAATATTCTGTTTGTACTTGCTTTTAATTCCTTCAAAAACATTTCGATTTCTATGGATTTCACCTTATTCCATTAATCTCCGGAACGGATACGCATGCGGATTTTATTTTCATAAGAAAAGAGGTCAATGTTAATATATCTGAATGGACTTCTTCTTGTCTCGCCTACTGATCAGGTCAGGTTGGATTGCATGATTGTGATCTCAGTCATGACCTTGCCGCAAGGTAAGTTTAACGTATGTTATAATTCTTTTTGTTTAGAATAATAACGTGTTATAATTCTCAAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAACGTATGTTATATAGATTTTTAAGTTCGCTTTTGTATCTTGTTGGTTGATGATGATTATAAATTATAATTAAGGTTATAAAAAAAGAAAAAGAGAGAAGTTAAAACCAGATTTCATAGCATAATTAGGGGGCCAAGAAAGCTGCAAAATGTACAGGTTTAAATTTAATAAATTTATTTTTATAATCTAAGCATTTTATGTCTAAGAGATTCTTAAACTTTCAAATTTTCACCATATTGTTTTACATTAACCAAAGGCTACCGCAGGAATCTTGCAATTAATTTGCAAGGTGAATTACAAACTGCTCGTGGAAACTTCTTAGTTAACTGCAGCTACTAAATTTCAAACCAAAGTTAGGAAGAGAGAAAAGACAGAATATTTGGGATAATGGAGCTGAATTTACATTCTATTAAAAATAAAGGTCAATCTAAACATTGCTCAACTAGTTTAAAAATGTGTCCTCGACCAAGAGATCAGAGGTTTGAGTCTCCCCCATATGACATTTAACTTGAAAAAAACAGTTTAGGATAGAACAACGACCATTAATTATCTGATACAGTGTGATGAATGTACGTAGGGCTACTGGAATGGACAAGTTTTGTTCGCCTAACCTCGTATAATACTCGGGCAAATGGACAGGTGATCATTCCATGATGATGAGATGCTTTATTTCACTTCAATTATTTCCTAGTCTGAAAAATGACCAACAACTCGAGCTTCTGATCTTAGTGCTTCCAATATACTATCAACCCATCTGCATCTCAGTTATCATGTTTGTATATATTCAGTATTCATTATATTCGATCTGCTTGAAAGATTGTTCTGAACTTAAGAAGTGCATAAACTAGAAGATTCTTGTTAAGTTGAAGTACGGAATAACTCACCCTTCCAAGCCGGGATTCTTGGGGTAGTAAACGTTTTTCAATCCTAATCTTTTTGCTGCTGCTGCAGTTGTTTCCCCAATACAGGCAAGTGATTTGTCCCACTCCTTTGGCCCTGAAATAAGATTGACCCATGCACTGTTGCGACAGATGGAACAAACAAATTAG

mRNA sequence

GGTCCCTCCGCTGGCTGCGTCTGAAAATTTCCTCTCTGACGATGCATTCTCACTGCCAATCTCAGAGGTCAATGTTAATATATCTGAATGGACTTCTTCTTGTCTCGCCTACTGATCAGGTCAGGTTGGATTGCATGATTGTGATCTCAGTCATGACCTTGCCGCAAGTTGTTTCCCCAATACAGGCAAGTGATTTGTCCCACTCCTTTGGCCCTGAAATAAGATTGACCCATGCACTGTTGCGACAGATGGAACAAACAAATTAG

Coding sequence (CDS)

ATGCATTCTCACTGCCAATCTCAGAGGTCAATGTTAATATATCTGAATGGACTTCTTCTTGTCTCGCCTACTGATCAGGTCAGGTTGGATTGCATGATTGTGATCTCAGTCATGACCTTGCCGCAAGTTGTTTCCCCAATACAGGCAAGTGATTTGTCCCACTCCTTTGGCCCTGAAATAAGATTGACCCATGCACTGTTGCGACAGATGGAACAAACAAATTAG

Protein sequence

MHSHCQSQRSMLIYLNGLLLVSPTDQVRLDCMIVISVMTLPQVVSPIQASDLSHSFGPEIRLTHALLRQMEQTN
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G015620.1ClCG08G015620.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG08G015620Bottle gourd (USVL1VR-Ls)lsiwcgB305
ClCG08G015620Bottle gourd (USVL1VR-Ls)lsiwcgB438
ClCG08G015620Cucumber (Gy14) v2cgybwcgB155
ClCG08G015620Cucumber (Gy14) v2cgybwcgB309
ClCG08G015620Cucumber (Gy14) v2cgybwcgB529
ClCG08G015620Melon (DHL92) v3.6.1medwcgB288
ClCG08G015620Melon (DHL92) v3.6.1medwcgB496
ClCG08G015620Silver-seed gourdcarwcgB0106
ClCG08G015620Silver-seed gourdcarwcgB0178
ClCG08G015620Silver-seed gourdcarwcgB0264
ClCG08G015620Silver-seed gourdcarwcgB0752
ClCG08G015620Cucumber (Chinese Long) v3cucwcgB176
ClCG08G015620Cucumber (Chinese Long) v3cucwcgB350
ClCG08G015620Watermelon (97103) v2wcgwmbB327
ClCG08G015620Watermelon (97103) v2wcgwmbB336
ClCG08G015620Wax gourdwcgwgoB612
ClCG08G015620Wax gourdwcgwgoB656
ClCG08G015620Watermelon (Charleston Gray)wcgwcgB138
ClCG08G015620Watermelon (Charleston Gray)wcgwcgB166
ClCG08G015620Cucumber (Gy14) v1cgywcgB195
ClCG08G015620Cucumber (Gy14) v1cgywcgB407
ClCG08G015620Cucurbita maxima (Rimu)cmawcgB029
ClCG08G015620Cucurbita maxima (Rimu)cmawcgB169
ClCG08G015620Cucurbita maxima (Rimu)cmawcgB434
ClCG08G015620Cucurbita maxima (Rimu)cmawcgB712
ClCG08G015620Cucurbita moschata (Rifu)cmowcgB023
ClCG08G015620Cucurbita moschata (Rifu)cmowcgB161
ClCG08G015620Cucurbita moschata (Rifu)cmowcgB435
ClCG08G015620Cucurbita moschata (Rifu)cmowcgB716
ClCG08G015620Wild cucumber (PI 183967)cpiwcgB172
ClCG08G015620Wild cucumber (PI 183967)cpiwcgB350
ClCG08G015620Wild cucumber (PI 183967)cpiwcgB601
ClCG08G015620Cucumber (Chinese Long) v2cuwcgB169
ClCG08G015620Cucumber (Chinese Long) v2cuwcgB332
ClCG08G015620Cucumber (Chinese Long) v2cuwcgB568
ClCG08G015620Melon (DHL92) v3.5.1mewcgB295
ClCG08G015620Melon (DHL92) v3.5.1mewcgB502
ClCG08G015620Watermelon (97103) v1wcgwmB400
ClCG08G015620Watermelon (97103) v1wcgwmB412
ClCG08G015620Watermelon (97103) v1wcgwmB421
ClCG08G015620Cucurbita pepo (Zucchini)cpewcgB125
ClCG08G015620Cucurbita pepo (Zucchini)cpewcgB528
ClCG08G015620Cucurbita pepo (Zucchini)cpewcgB708
ClCG08G015620Cucurbita pepo (Zucchini)cpewcgB748