ClCG08G009690 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG08G009690
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	NADH-quinone oxidoreductase subunit D
Location	CG_Chr08 : 22397946 .. 22399979 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGGGGCTCGGAAAAATAACGAGAATCGGTGTCGTGGTGGTACTACGAGATGGCGATTTATCGTATAGAAGAATAGATCTGCGGACCTATTGATTGACCATAGATGCGACTGCTATCTAAGAGAATCTCAGTAGTTCTTCTATCGTTCAAGGGCAAGGGGAAAACATGTAGCGGCTTGCCTAGATCTCGTATTTCCCACGTAGTCCGTCGATCAAACCAACGATTCTCTTCTCAAAGTAATAGAGAGATTCTTTTTCTTTTTCTGGTATGTAACTCCGCGAGCTAGGAGCGCATCATCGGGGCAGGGCGAAAACGAACATAGGATCATCATCATGGCCCTTTTCTTGTTTCTTTTGTTTGTGTCCGGCTTTATTTAGTTAAAAAGAGGTGTGTGTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATTTGGTGTCTTTCTGGTCAGTAATGGAAGCAATCGTCCTTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTCCAAACATCACATGCCAGCGGATGTGGTCACCATCATAGGTACTCAAGATATTGTGTCTGGAGAGGTAGATAGATAGGACTACTAGTTGCTCGATCAAGGGCCCTAGCTTTATTGCGAGCCAAAAACCTCAGCGGATCCTATAAAGAGAAAGCCTCTCGGAGAAAGTTTTTGTCGCCGTTAAAGTCGAGAGAGAAGTCTCTAAAGCCGCTATGGTCTGGGCTCTCACTCACGTCGTCCGTCCTGGGGACTCTATTACGCTGCTCGCCCTATTAGCTAGCCGGCGGCAACCGTGGAAATTCATTAATTTCAGCCTGTCTCGGGTTCTCTATTGTACGGCGAAACTCGCTAATAATATATATATGTTTTCTCAGGAACCAGACCTACATGCACAAAGAAGAATATATATCTCTGGTCATATTCTTATGTAACTTCTGTCGTCCCGTTCATTGTGGTTCCTCGGCCCTGCTAGCCATTTGCTTGCTCGAACTGTACACAGAATGGAGAAAAACACTCGCCAATACATTCTCCATATATTTTGAGTTATATTTTGATTAACCGTTTATTTTTTGTTTAATTCTAAACAAAGTCATTGATGATCTCAATGCTTCTGCTGTATATGGATCGTTCATTCCCTTTAGTTATAAGCCTGTTGAGGATGAGAGGTGA

mRNA sequence

ATGGGGGGGGCTCGGAAAAATAACGAGAATCGTAATGGAAGCAATCGTCCTTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTCCAAACATCACATGCCAGCGGATGTGGTCACCATCATAGAAAGCCTCTCGGAGAAAGTTTTTGTCGCCGTTAAAGTCGAGAGAGAAGTCTCTAAAGCCGCTATGGTCTGGGCTCTCACTCACGTCGTCCGTCCTGGGGACTCTATTACGCTGCTCGCCCTATTAGCTAGCCGGCGGCAACCGTGGAAATTCATTAATTTCAGCCTGTCTCGGGTTCTCTATTTCATTGATGATCTCAATGCTTCTGCTGTATATGGATCGTTCATTCCCTTTAGTTATAAGCCTGTTGAGGATGAGAGGTGA

Coding sequence (CDS)

ATGGGGGGGGCTCGGAAAAATAACGAGAATCGTAATGGAAGCAATCGTCCTTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTCCAAACATCACATGCCAGCGGATGTGGTCACCATCATAGAAAGCCTCTCGGAGAAAGTTTTTGTCGCCGTTAAAGTCGAGAGAGAAGTCTCTAAAGCCGCTATGGTCTGGGCTCTCACTCACGTCGTCCGTCCTGGGGACTCTATTACGCTGCTCGCCCTATTAGCTAGCCGGCGGCAACCGTGGAAATTCATTAATTTCAGCCTGTCTCGGGTTCTCTATTTCATTGATGATCTCAATGCTTCTGCTGTATATGGATCGTTCATTCCCTTTAGTTATAAGCCTGTTGAGGATGAGAGGTGA

Protein sequence

MGGARKNNENRNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESLSEKVFVAVKVEREVSKAAMVWALTHVVRPGDSITLLALLASRRQPWKFINFSLSRVLYFIDDLNASAVYGSFIPFSYKPVEDER

Homology

[Close]

BLAST of ClCG08G009690 vs. Swiss-Prot
Match: NDUS2_NICSY (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris GN=NAD7 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.9e-13
Identity = 36/38 (94.74%), Postives = 34/38 (89.47%), Query Frame = 1


Query: 12  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 50
           NGSNRPYRRKIRAP  AHSQGLDSMSKHHMPADVVTII
Sbjct: 345 NGSNRPYRRKIRAPCFAHSQGLDSMSKHHMPADVVTII 382

[Close]

BLAST of ClCG08G009690 vs. Swiss-Prot
Match: NDUS2_ARATH (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana GN=NAD7 PE=2 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-10
Identity = 33/38 (86.84%), Postives = 31/38 (81.58%), Query Frame = 1


Query: 12  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 50
           NGSNRPYR KIRAPG AH QGLD MSKHHM ADVVTII
Sbjct: 345 NGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTII 382

[Close]

BLAST of ClCG08G009690 vs. Swiss-Prot
Match: NDUS2_NEPOL (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea GN=NAD7 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.4e-09
Identity = 30/38 (78.95%), Postives = 30/38 (78.95%), Query Frame = 1


Query: 12  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 50
           NG+NRPYR KIRAPG  H QGLD MSK+HM ADVVTII
Sbjct: 349 NGTNRPYRCKIRAPGFLHLQGLDMMSKNHMLADVVTII 386

[Close]

BLAST of ClCG08G009690 vs. Swiss-Prot
Match: NDUS2_PROWI (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Prototheca wickerhamii GN=NAD7 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.4e-08
Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 1


Query: 12  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 50
           NG+++PYR KIRAPG AH QGLD M+++HM ADVVTII
Sbjct: 351 NGTSKPYRCKIRAPGFAHLQGLDFMARNHMLADVVTII 388

[Close]

BLAST of ClCG08G009690 vs. Swiss-Prot
Match: NUOD_RICM5 (NADH-quinone oxidoreductase subunit D OS=Rickettsia massiliae (strain Mtu5) GN=nuoD PE=3 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 8.4e-08
Identity = 27/40 (67.50%), Postives = 30/40 (75.00%), Query Frame = 1


Query: 13  GSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESL 53
           G NRPYR +I+APG AH QGLD MSK H+ ADV+TII +L
Sbjct: 343 GGNRPYRCRIKAPGFAHLQGLDFMSKGHLMADVITIIATL 382

[Close]

BLAST of ClCG08G009690 vs. TrEMBL
Match: A0A0D2ZTM9_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.6e-13
Identity = 52/112 (46.43%), Postives = 65/112 (58.04%), Query Frame = 1


Query: 12  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESLSEKVFVAVKVEREVSKAAM 71
           NGSN PYRRKIRAPG AHSQGLDSMSKHHMPADVVTII  ++      V ++R       
Sbjct: 47  NGSNHPYRRKIRAPGFAHSQGLDSMSKHHMPADVVTIIAEMNR-----VTMKR------- 106

Query: 72  VWALTHVVRPGDSITLLALLA--SRRQPWKFINFSLSRV--LYFIDDLNASA 120
                 VV P  ++ LL +    SRR+ W+  +    RV   +  DD+  S+
Sbjct: 107 -----MVVDPDSTVNLLPMSTRHSRRKDWRSTSREFDRVPGCFCTDDILRSS 141

[Close]

BLAST of ClCG08G009690 vs. TrEMBL
Match: A0A0X8GKJ8_MEDSA (NADH dehydrogenase subunit 7 OS=Medicago sativa PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.9e-13
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1


Query: 12  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 50
           NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
Sbjct: 345 NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 382

[Close]

BLAST of ClCG08G009690 vs. TrEMBL
Match: A0A126TGU8_MEDTR (NADH dehydrogenase subunit 7 OS=Medicago truncatula GN=nad7 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.9e-13
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1


Query: 12  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 50
           NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
Sbjct: 345 NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 382

[Close]

BLAST of ClCG08G009690 vs. TrEMBL
Match: A0A109WWA8_9ROSI (NADH dehydrogenase subunit 7 OS=Salix suchowensis GN=nad7 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.9e-13
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1


Query: 12  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 50
           NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
Sbjct: 345 NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 382

[Close]

BLAST of ClCG08G009690 vs. TrEMBL
Match: D7TSH3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0332g00140 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.9e-13
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1


Query: 12  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 50
           NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
Sbjct: 81  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 118

[Close]

BLAST of ClCG08G009690 vs. TAIR10
Match: ATMG00510.1 (ATMG00510.1 NADH dehydrogenase subunit 7)

HSP 1 Score: 81.6 bits (200), Expect = 4.0e-16
Identity = 38/38 (100.00%), Postives = 36/38 (94.74%), Query Frame = 1


Query: 12  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 50
           NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
Sbjct: 345 NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 382

[Close]

BLAST of ClCG08G009690 vs. TAIR10
Match: AT1G55200.1 (AT1G55200.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain)

HSP 1 Score: 61.2 bits (147), Expect = 5.6e-10
Identity = 30/55 (54.55%), Postives = 36/55 (65.45%), Query Frame = 1


Query: 53  SEKVFVAVKVEREVSKAAMVWALTHVVRPGDSITLLALLAS---RRQPWKFINFS 105
           +EKV VAVK  RE+SK A VWALTH+V PGD ITL+ ++ S    R+ W F  F+
Sbjct: 15  TEKVLVAVKASREISKTAFVWALTHIVHPGDCITLIVVVTSYNAGRKLWTFPRFA 69

[Close]

BLAST of ClCG08G009690 vs. TAIR10
Match: AT3G13690.1 (AT3G13690.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain)

HSP 1 Score: 59.3 bits (142), Expect = 2.1e-09
Identity = 27/59 (45.76%), Postives = 37/59 (62.71%), Query Frame = 1


Query: 48  IIESLSEKVFVAVKVEREVSKAAMVWALTHVVRPGDSITLLALLASRRQPWKFINFSLS 107
           ++   ++KV VAVK  RE+ K A++WALTHVV+PGD ITL+ ++ S     K   F+ S
Sbjct: 14  VVSDGAQKVIVAVKASREIPKTALIWALTHVVQPGDCITLIVVVPSHNSGRKLWGFTKS 72

[Close]

BLAST of ClCG08G009690 vs. TAIR10
Match: AT5G56790.1 (AT5G56790.1 Protein kinase superfamily protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.2e-07
Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 1


Query: 52  LSEKVFVAVKVEREVSKAAMVWALTHVVRPGDSITLLALLASR---RQPWKFINFS 105
           + +KV VAV+  +E+ KAA++W LTHVV+PGD I LL ++ S    ++ W F  F+
Sbjct: 13  VGKKVMVAVRASKEIPKAALLWTLTHVVQPGDRIRLLVVVPSNYTSKKIWGFSRFT 68

[Close]

BLAST of ClCG08G009690 vs. NCBI nr
Match: gi|984915219|gb|AMC33027.1| (NADH dehydrogenase subunit 7 (mitochondrion) [Astragalus canadensis])

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-12
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1


Query: 12  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 50
           NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
Sbjct: 345 NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 382

[Close]

BLAST of ClCG08G009690 vs. NCBI nr
Match: gi|661813545|ref|YP_009045735.1| (NADH dehydrogenase subunit 7 (mitochondrion) [Batis maritima])

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-12
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1


Query: 12  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 50
           NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
Sbjct: 345 NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 382

[Close]

BLAST of ClCG08G009690 vs. NCBI nr
Match: gi|476507690|ref|YP_007516886.1| (NADH dehydrogenase subunit 7 (mitochondrion) [Glycine max])

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-12
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1


Query: 12  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 50
           NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
Sbjct: 345 NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 382

[Close]

BLAST of ClCG08G009690 vs. NCBI nr
Match: gi|13449329|ref|NP_085511.1| (NADH dehydrogenase subunit 7 [Arabidopsis thaliana])

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-12
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1


Query: 12  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 50
           NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
Sbjct: 345 NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 382

[Close]

BLAST of ClCG08G009690 vs. NCBI nr
Match: gi|984915234|gb|AMC33034.1| (NADH dehydrogenase subunit 7 (mitochondrion) [Cleomella serrulata])

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-12
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1


Query: 12  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 50
           NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
Sbjct: 345 NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII 382

The following BLAST results are available for this feature:

BLAST of ClCG08G009690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NDUS2_NICSY	3.9e-13	94.74	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris GN...	[more]
NDUS2_ARATH	1.1e-10	86.84	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana GN...	[more]
NDUS2_NEPOL	4.4e-09	78.95	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea G...	[more]
NDUS2_PROWI	6.4e-08	71.05	NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Prototheca wickerhamii GN=NAD7 ...	[more]
NUOD_RICM5	8.4e-08	67.50	NADH-quinone oxidoreductase subunit D OS=Rickettsia massiliae (strain Mtu5) GN=n...	[more]

BLAST of ClCG08G009690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0D2ZTM9_BRAOL	4.6e-13	46.43	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]
A0A0X8GKJ8_MEDSA	7.9e-13	100.00	NADH dehydrogenase subunit 7 OS=Medicago sativa PE=3 SV=1	[more]
A0A126TGU8_MEDTR	7.9e-13	100.00	NADH dehydrogenase subunit 7 OS=Medicago truncatula GN=nad7 PE=3 SV=1	[more]
A0A109WWA8_9ROSI	7.9e-13	100.00	NADH dehydrogenase subunit 7 OS=Salix suchowensis GN=nad7 PE=3 SV=1	[more]
D7TSH3_VITVI	7.9e-13	100.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0332g00140 PE=4 SV=...	[more]

BLAST of ClCG08G009690 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG00510.1	4.0e-16	100.00	ATMG00510.1 NADH dehydrogenase subunit 7	[more]
AT1G55200.1	5.6e-10	54.55	Protein kinase protein with adenine nucleotide alpha hydrolases-like...	[more]
AT3G13690.1	2.1e-09	45.76	Protein kinase protein with adenine nucleotide alpha hydrolases-like...	[more]
AT5G56790.1	1.2e-07	44.64	Protein kinase superfamily protein	[more]

BLAST of ClCG08G009690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|984915219\|gb\|AMC33027.1\|	1.1e-12	100.00	NADH dehydrogenase subunit 7 (mitochondrion) [Astragalus canadensis]	[more]
gi\|661813545\|ref\|YP_009045735.1\|	1.1e-12	100.00	NADH dehydrogenase subunit 7 (mitochondrion) [Batis maritima]	[more]
gi\|476507690\|ref\|YP_007516886.1\|	1.1e-12	100.00	NADH dehydrogenase subunit 7 (mitochondrion) [Glycine max]	[more]
gi\|13449329\|ref\|NP_085511.1\|	1.1e-12	100.00	NADH dehydrogenase subunit 7 [Arabidopsis thaliana]	[more]
gi\|984915234\|gb\|AMC33034.1\|	1.1e-12	100.00	NADH dehydrogenase subunit 7 (mitochondrion) [Cleomella serrulata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001135	NADH_Q_OxRdtase_suD

Vocabulary: **Molecular Function**
Term	Definition
GO:0016651	oxidoreductase activity, acting on NAD(P)H
GO:0048038	quinone binding
GO:0051287	NAD binding

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0015992	proton transport
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G009690.1	ClCG08G009690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001135	NADH-quinone oxidoreductase, subunit D	PFAM	PF00346	Complex1_49kDa	coord: 12..52 score: 8.
None	No IPR available	PANTHER	PTHR11993	NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT	coord: 12..52 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG08G009690	Cla97C08G152500	Watermelon (97103) v2	wcgwmbB336

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG08G009690	Wax gourd	wcgwgoB626
ClCG08G009690	Cucumber (Gy14) v1	cgywcgB046
ClCG08G009690	Cucurbita maxima (Rimu)	cmawcgB175
ClCG08G009690	Cucurbita maxima (Rimu)	cmawcgB710
ClCG08G009690	Cucurbita maxima (Rimu)	cmawcgB711
ClCG08G009690	Cucurbita moschata (Rifu)	cmowcgB166
ClCG08G009690	Cucurbita moschata (Rifu)	cmowcgB714
ClCG08G009690	Cucurbita moschata (Rifu)	cmowcgB715
ClCG08G009690	Wild cucumber (PI 183967)	cpiwcgB522
ClCG08G009690	Cucumber (Chinese Long) v2	cuwcgB496
ClCG08G009690	Melon (DHL92) v3.5.1	mewcgB296
ClCG08G009690	Watermelon (97103) v1	wcgwmB400
ClCG08G009690	Cucurbita pepo (Zucchini)	cpewcgB123
ClCG08G009690	Cucurbita pepo (Zucchini)	cpewcgB124
ClCG08G009690	Cucurbita pepo (Zucchini)	cpewcgB756
ClCG08G009690	Bottle gourd (USVL1VR-Ls)	lsiwcgB438
ClCG08G009690	Cucumber (Gy14) v2	cgybwcgB454
ClCG08G009690	Melon (DHL92) v3.6.1	medwcgB289
ClCG08G009690	Silver-seed gourd	carwcgB0129
ClCG08G009690	Silver-seed gourd	carwcgB0179
ClCG08G009690	Cucumber (Chinese Long) v3	cucwcgB514