ClCG08G008970 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG08G008970
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	3-ketoacyl-CoA thiolase B, putative
Location	CG_Chr08 : 21495457 .. 21495997 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTCTGGCCATTGGCCAATTAGCTGAAGCCAGCATTCAAGAAAGATGGCTGCACAACAGCAGGGAACTCTAGTCAAGTTAGTGACGGAGCTGCTGCAGTCCTCCTCATGAAAAGAAGCTTAGCTATCCAGAAAGGACTTCCAATTCTTGGTGTCTTTAGGAGTTTTTCAGTAGTTGGTGTGGATCCAGCAGTAATGGGCATTGGACCAGCTGCTGGTCTTACTCTCCAAGATATTGACCTTTTCGAAATTAATGAGGCATTTGCATCTCAGTATGTGTATTGCTGTAAGGAACTAAAGCTTGATACTGAAAAGGTGAATGTTAATGGCGGTGCAACGACTCTGGGCCATCCTTTGGGCGCAACTGGTGCTCGTTGTGTGGCGATGCTCTTGAGTGAAATGAAGCGTCGTGGAAGGGATAGCCGATTTGGGGTAATCTCCATGTGCATAGGTTCAGGGATGGGTGCTGCAGCTGTGTTTGAAAGAGGTGGCTATGTTGATGAGCTTCGCAAAGCAATTAGGCCAACCTTCCAATAA

mRNA sequence

ATGGAACTGAAGCCAGCATTCAAGAAAGATGGCTGCACAACAGCAGGGAACTCTAGTCAAGTTAGTGACGGAGCTGCTGCAGTCCTCCTCATGAAAAGAAGCTTAGCTATCCAGAAAGGACTTCCAATTCTTGGTGTCTTTAGGAGTTTTTCAGTAGTTGGTGTGGATCCAGCAGTAATGGGCATTGGACCAGCTGCTGGTCTTACTCTCCAAGATATTGACCTTTTCGAAATTAATGAGGCATTTGCATCTCAGTATGTGTATTGCTGTAAGGAACTAAAGCTTGATACTGAAAAGGTGAATGTTAATGGCGGTGCAACGACTCTGGGCCATCCTTTGGGCGCAACTGGTGCTCGTTGTGTGGCGATGCTCTTGAGTGAAATGAAGCGTCGTGGAAGGGATAGCCGATTTGGGGTAATCTCCATGTGCATAGGTTCAGGGATGGGTGCTGCAGCTGTGTTTGAAAGAGGTGGCTATGTTGATGAGCTTCGCAAAGCAATTAGGCCAACCTTCCAATAA

Coding sequence (CDS)

ATGGAACTGAAGCCAGCATTCAAGAAAGATGGCTGCACAACAGCAGGGAACTCTAGTCAAGTTAGTGACGGAGCTGCTGCAGTCCTCCTCATGAAAAGAAGCTTAGCTATCCAGAAAGGACTTCCAATTCTTGGTGTCTTTAGGAGTTTTTCAGTAGTTGGTGTGGATCCAGCAGTAATGGGCATTGGACCAGCTGCTGGTCTTACTCTCCAAGATATTGACCTTTTCGAAATTAATGAGGCATTTGCATCTCAGTATGTGTATTGCTGTAAGGAACTAAAGCTTGATACTGAAAAGGTGAATGTTAATGGCGGTGCAACGACTCTGGGCCATCCTTTGGGCGCAACTGGTGCTCGTTGTGTGGCGATGCTCTTGAGTGAAATGAAGCGTCGTGGAAGGGATAGCCGATTTGGGGTAATCTCCATGTGCATAGGTTCAGGGATGGGTGCTGCAGCTGTGTTTGAAAGAGGTGGCTATGTTGATGAGCTTCGCAAAGCAATTAGGCCAACCTTCCAATAA

Protein sequence

MELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMGIGPAAGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHPLGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGGYVDELRKAIRPTFQ

Homology

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BLAST of ClCG08G008970 vs. Swiss-Prot
Match: THIK2_ARATH (3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2)

HSP 1 Score: 262.3 bits (669), Expect = 3.7e-69
Identity = 133/174 (76.44%), Postives = 145/174 (83.33%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LKP FKKDG TTAGNSSQVSDGA AVLLMKRS+A+QKGLP+LGVFR+F+ VGVDPA+MG
Sbjct: 275 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMG 334

Query: 62  IGP---------AAGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           IGP         AAGL L DIDLFEINEAFASQ+VYC  +L LD EK+NVNGGA  +GHP
Sbjct: 335 IGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHP 394

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGGYVDELRKA 167
           LGATGARCVA LL EMKRRG+D RFGV+SMCIG+GMGAAAVFERG  VDELR A
Sbjct: 395 LGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGDGVDELRNA 448

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BLAST of ClCG08G008970 vs. Swiss-Prot
Match: THIK1_ARATH (3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=2 SV=2)

HSP 1 Score: 258.8 bits (660), Expect = 4.1e-68
Identity = 129/171 (75.44%), Postives = 144/171 (84.21%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LKP FK+DG TTAGNSSQ+SDGA AVLLM+R++A+QKGLPILGVFR+FS VGVDPA+MG
Sbjct: 267 KLKPVFKEDGTTTAGNSSQLSDGAGAVLLMRRNVAMQKGLPILGVFRTFSAVGVDPAIMG 326

Query: 62  IGP---------AAGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           +GP         AAGL L D+DLFEINEAFASQ+VYC  +L LD EK+NVNGGA  +GHP
Sbjct: 327 VGPAVAIPAAVKAAGLELNDVDLFEINEAFASQFVYCRNKLGLDAEKINVNGGAIAIGHP 386

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGGYVDEL 164
           LGATGARCVA LL EMKRRG+D RFGV+SMCIGSGMGAAAVFERGG VDEL
Sbjct: 387 LGATGARCVATLLHEMKRRGKDCRFGVVSMCIGSGMGAAAVFERGGGVDEL 437

[Close]

BLAST of ClCG08G008970 vs. Swiss-Prot
Match: THIK5_ARATH (3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2)

HSP 1 Score: 254.6 bits (649), Expect = 7.7e-67
Identity = 130/174 (74.71%), Postives = 144/174 (82.76%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LK  FK++G TTAGN+SQ+SDGA AVLLMKRSLA++KGLPILGVFRSF+V GV+P+VMG
Sbjct: 276 KLKTVFKQNGSTTAGNASQISDGAGAVLLMKRSLAMKKGLPILGVFRSFAVTGVEPSVMG 335

Query: 62  IGPA---------AGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           IGPA         AGL + DIDLFEINEAFASQYVY CK+L+LD EKVNVNGGA  +GHP
Sbjct: 336 IGPAVAIPAATKLAGLNVSDIDLFEINEAFASQYVYSCKKLELDMEKVNVNGGAIAIGHP 395

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGGYVDELRKA 167
           LGATGARCVA LL EMKRRG+D RFGVISMCIG+GMGAAAVFERG  VD L  A
Sbjct: 396 LGATGARCVATLLHEMKRRGKDCRFGVISMCIGTGMGAAAVFERGDSVDNLSNA 449

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BLAST of ClCG08G008970 vs. Swiss-Prot
Match: THIK_HUMAN (3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2)

HSP 1 Score: 210.7 bits (535), Expect = 1.3e-53
Identity = 111/166 (66.87%), Postives = 129/166 (77.71%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LKPAFKKDG TTAGNSSQVSDGAAA+LL +RS A + GLPILGV RS++VVGV P +MG
Sbjct: 259 KLKPAFKKDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMG 318

Query: 62  IGPA---------AGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           IGPA         AGLT+ D+D+FEINEAFASQ  YC ++L+L  EKVN  GGA  LGHP
Sbjct: 319 IGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHP 378

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGG 159
           LG TGAR V  LL+E+KRRG+ + +GV+SMCIG+GMGAAAVFE  G
Sbjct: 379 LGCTGARQVITLLNELKRRGKRA-YGVVSMCIGTGMGAAAVFEYPG 423

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BLAST of ClCG08G008970 vs. Swiss-Prot
Match: THIKA_MOUSE (3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=1 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.1e-52
Identity = 113/166 (68.07%), Postives = 127/166 (76.51%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LKPAFK  G TTAGNSSQVSDGAAAVLL +RS A + GLPILGV RS++VVGV P VMG
Sbjct: 259 KLKPAFKDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDVMG 318

Query: 62  IGPA---------AGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           IGPA         AGLT+ DID+FEINEAFASQ VYC ++L +  EKVN  GGA  LGHP
Sbjct: 319 IGPAYAIPAALQKAGLTVNDIDIFEINEAFASQAVYCVEKLGIPAEKVNPLGGAIALGHP 378

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGG 159
           LG TGAR V  LL+E+KRRGR + +GV+SMCIG+GMGAAAVFE  G
Sbjct: 379 LGCTGARQVVTLLNELKRRGRRA-YGVVSMCIGTGMGAAAVFEYPG 423

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BLAST of ClCG08G008970 vs. TrEMBL
Match: A0A0A0LBK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G624070 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 4.0e-78
Identity = 156/179 (87.15%), Postives = 161/179 (89.94%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LKPAFKK+GCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG
Sbjct: 274 KLKPAFKKNGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 333

Query: 62  IGPA---------AGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           IGPA         AGLTLQDIDLFEINEAFASQYVYCCK+L LDTEKVNVNGGA  LGHP
Sbjct: 334 IGPAVAIPAAVKSAGLTLQDIDLFEINEAFASQYVYCCKKLNLDTEKVNVNGGAIALGHP 393

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGGYVDELRKAIRPTF 172
           LG TGARCVA LLSEMKRRGRDSRFGVISMCIG+GMGAAAV ERG YVDELR A RP+F
Sbjct: 394 LGTTGARCVATLLSEMKRRGRDSRFGVISMCIGTGMGAAAVIERGDYVDELRNA-RPSF 451

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BLAST of ClCG08G008970 vs. TrEMBL
Match: A0A059A7T5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K03601 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.8e-70
Identity = 141/174 (81.03%), Postives = 150/174 (86.21%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LKPAF+KDG TTAGN+SQVSDGA AVLLMKRS+A+QKGLPILGVFRSF+ VGVDPAVMG
Sbjct: 279 KLKPAFRKDGATTAGNASQVSDGAGAVLLMKRSVAVQKGLPILGVFRSFAAVGVDPAVMG 338

Query: 62  IGPA---------AGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           IGPA         AGLTL DIDL EINEAFASQYVYCCK+L LD EKVNVNGGA  LGHP
Sbjct: 339 IGPAVAIPAAVKSAGLTLDDIDLLEINEAFASQYVYCCKKLGLDPEKVNVNGGALALGHP 398

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGGYVDELRKA 167
           LGATGARCVA LL+EMKR+GRDSRFGVISMCIGSGMGAAAVFERG   DEL  A
Sbjct: 399 LGATGARCVATLLNEMKRQGRDSRFGVISMCIGSGMGAAAVFERGDCADELCNA 452

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BLAST of ClCG08G008970 vs. TrEMBL
Match: M5VYZ5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005303mg PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.3e-70
Identity = 141/171 (82.46%), Postives = 149/171 (87.13%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LKPAFK DG TTAGN+SQVSDGA AVLLMKRSLA+QKGLPILGVFRSF+ VGVDPAVMG
Sbjct: 280 KLKPAFKADGSTTAGNASQVSDGAGAVLLMKRSLAMQKGLPILGVFRSFAAVGVDPAVMG 339

Query: 62  IGPA---------AGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           IGPA         AGL L DIDLFEINEAFASQYVYCCK+L+LD EKVNVNGGA  LGHP
Sbjct: 340 IGPAAAIPVAVKSAGLELDDIDLFEINEAFASQYVYCCKKLELDPEKVNVNGGAIALGHP 399

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGGYVDEL 164
           LGATGARCVA LL+EMKRRG+D RFGVISMCIGSGMGAAAVFERG  VDEL
Sbjct: 400 LGATGARCVATLLNEMKRRGKDHRFGVISMCIGSGMGAAAVFERGDSVDEL 450

[Close]

BLAST of ClCG08G008970 vs. TrEMBL
Match: A0A166JDR6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_004712 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.0e-70
Identity = 138/174 (79.31%), Postives = 152/174 (87.36%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LKP+FKKDG TTAGN+SQVSDGA AVLLMKRS+A++KGLPILGVFRSF+ VGVDPAVMG
Sbjct: 274 KLKPSFKKDGTTTAGNASQVSDGAGAVLLMKRSVAVKKGLPILGVFRSFAAVGVDPAVMG 333

Query: 62  IGPA---------AGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           +GPA         AGL + DIDLFEINEAFASQYVYCCK+L+LD EKVNVNGGA  LGHP
Sbjct: 334 VGPAVAIPAALKSAGLQVDDIDLFEINEAFASQYVYCCKKLELDPEKVNVNGGALALGHP 393

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGGYVDELRKA 167
           LGATGARCVA LL+EMKRRG+DSR+GVISMCIGSGMGAAAVFERG  VDEL  A
Sbjct: 394 LGATGARCVATLLNEMKRRGKDSRYGVISMCIGSGMGAAAVFERGDCVDELSNA 447

[Close]

BLAST of ClCG08G008970 vs. TrEMBL
Match: A0A061DNG8_THECC (Peroxisomal 3-ketoacyl-CoA thiolase 3 isoform 1 OS=Theobroma cacao GN=TCM_003008 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.0e-69
Identity = 138/170 (81.18%), Postives = 148/170 (87.06%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LKPAF+KDG TTAGN+SQVSDGA AVLLMKRSLA+QKGLPILGVFRSF+ VGVDPAVMG
Sbjct: 283 KLKPAFRKDGATTAGNASQVSDGAGAVLLMKRSLAMQKGLPILGVFRSFAAVGVDPAVMG 342

Query: 62  IGPA---------AGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           IGPA         AG+ L DIDLFEINEAFASQYVYCCK+L+LD+EKVNVNGGA  LGHP
Sbjct: 343 IGPAVAIPAAVKSAGIELADIDLFEINEAFASQYVYCCKKLELDSEKVNVNGGAIALGHP 402

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGGYVDE 163
           LGATGARCV  LL EMKRRG+D RFGVISMCIGSGMGAAAVFERG  VDE
Sbjct: 403 LGATGARCVGTLLYEMKRRGKDCRFGVISMCIGSGMGAAAVFERGDCVDE 452

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BLAST of ClCG08G008970 vs. TAIR10
Match: AT2G33150.1 (AT2G33150.1 peroxisomal 3-ketoacyl-CoA thiolase 3)

HSP 1 Score: 262.3 bits (669), Expect = 2.1e-70
Identity = 133/174 (76.44%), Postives = 145/174 (83.33%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LKP FKKDG TTAGNSSQVSDGA AVLLMKRS+A+QKGLP+LGVFR+F+ VGVDPA+MG
Sbjct: 275 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMG 334

Query: 62  IGP---------AAGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           IGP         AAGL L DIDLFEINEAFASQ+VYC  +L LD EK+NVNGGA  +GHP
Sbjct: 335 IGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHP 394

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGGYVDELRKA 167
           LGATGARCVA LL EMKRRG+D RFGV+SMCIG+GMGAAAVFERG  VDELR A
Sbjct: 395 LGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGDGVDELRNA 448

[Close]

BLAST of ClCG08G008970 vs. TAIR10
Match: AT1G04710.1 (AT1G04710.1 peroxisomal 3-ketoacyl-CoA thiolase 4)

HSP 1 Score: 258.8 bits (660), Expect = 2.3e-69
Identity = 129/171 (75.44%), Postives = 144/171 (84.21%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LKP FK+DG TTAGNSSQ+SDGA AVLLM+R++A+QKGLPILGVFR+FS VGVDPA+MG
Sbjct: 267 KLKPVFKEDGTTTAGNSSQLSDGAGAVLLMRRNVAMQKGLPILGVFRTFSAVGVDPAIMG 326

Query: 62  IGP---------AAGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           +GP         AAGL L D+DLFEINEAFASQ+VYC  +L LD EK+NVNGGA  +GHP
Sbjct: 327 VGPAVAIPAAVKAAGLELNDVDLFEINEAFASQFVYCRNKLGLDAEKINVNGGAIAIGHP 386

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGGYVDEL 164
           LGATGARCVA LL EMKRRG+D RFGV+SMCIGSGMGAAAVFERGG VDEL
Sbjct: 387 LGATGARCVATLLHEMKRRGKDCRFGVVSMCIGSGMGAAAVFERGGGVDEL 437

[Close]

BLAST of ClCG08G008970 vs. TAIR10
Match: AT5G48880.2 (AT5G48880.2 peroxisomal 3-keto-acyl-CoA thiolase 2)

HSP 1 Score: 254.6 bits (649), Expect = 4.3e-68
Identity = 130/174 (74.71%), Postives = 144/174 (82.76%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LK  FK++G TTAGN+SQ+SDGA AVLLMKRSLA++KGLPILGVFRSF+V GV+P+VMG
Sbjct: 276 KLKTVFKQNGSTTAGNASQISDGAGAVLLMKRSLAMKKGLPILGVFRSFAVTGVEPSVMG 335

Query: 62  IGPA---------AGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           IGPA         AGL + DIDLFEINEAFASQYVY CK+L+LD EKVNVNGGA  +GHP
Sbjct: 336 IGPAVAIPAATKLAGLNVSDIDLFEINEAFASQYVYSCKKLELDMEKVNVNGGAIAIGHP 395

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGGYVDELRKA 167
           LGATGARCVA LL EMKRRG+D RFGVISMCIG+GMGAAAVFERG  VD L  A
Sbjct: 396 LGATGARCVATLLHEMKRRGKDCRFGVISMCIGTGMGAAAVFERGDSVDNLSNA 449

[Close]

BLAST of ClCG08G008970 vs. TAIR10
Match: AT5G48230.2 (AT5G48230.2 acetoacetyl-CoA thiolase 2)

HSP 1 Score: 115.9 bits (289), Expect = 2.4e-26
Identity = 69/164 (42.07%), Postives = 96/164 (58.54%), Query Frame = 1


Query: 2   ELKPAFKKDGCT-TAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVM 61
           +L+P+FK++G T TAGN+S +SDGAAA++L+    A+Q GL +L   + +     +P   
Sbjct: 240 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKALQLGLLVLAKIKGYGDAAQEPEFF 299

Query: 62  GIGPA---------AGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGH 121
              PA         AGL    +D +EINEAFA   +   K L +  EKVNVNGGA +LGH
Sbjct: 300 TTAPALAIPKAIAHAGLESSQVDYYEINEAFAVVALANQKLLGIAPEKVNVNGGAVSLGH 359

Query: 122 PLGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFE 156
           PLG +GAR +  LL  +K+  R+ ++GV  +C G G  +A V E
Sbjct: 360 PLGCSGARILITLLGILKK--RNGKYGVGGVCNGGGGASALVLE 401

[Close]

BLAST of ClCG08G008970 vs. TAIR10
Match: AT5G47720.2 (AT5G47720.2 Thiolase family protein)

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-25
Identity = 65/164 (39.63%), Postives = 96/164 (58.54%), Query Frame = 1


Query: 2   ELKPAFKKDG-CTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVM 61
           +L+P+FK+DG   TAGN+S +SDGAAA++L+    A++ GL ++   R ++     P + 
Sbjct: 242 KLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLHVIAKIRGYADAAQAPELF 301

Query: 62  GIGPA---------AGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGH 121
              PA         AGL    +D +EINEAF+   +   K L LD E++N +GGA +LGH
Sbjct: 302 TTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVSLGH 361

Query: 122 PLGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFE 156
           PLG +GAR +  LL  +  R +  ++GV S+C G G  +A V E
Sbjct: 362 PLGCSGARILVTLLGVL--RAKKGKYGVASICNGGGGASALVLE 403

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BLAST of ClCG08G008970 vs. NCBI nr
Match: gi|449468618|ref|XP_004152018.1| (PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal [Cucumis sativus])

HSP 1 Score: 298.9 bits (764), Expect = 5.7e-78
Identity = 156/179 (87.15%), Postives = 161/179 (89.94%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LKPAFKK+GCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG
Sbjct: 274 KLKPAFKKNGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 333

Query: 62  IGPA---------AGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           IGPA         AGLTLQDIDLFEINEAFASQYVYCCK+L LDTEKVNVNGGA  LGHP
Sbjct: 334 IGPAVAIPAAVKSAGLTLQDIDLFEINEAFASQYVYCCKKLNLDTEKVNVNGGAIALGHP 393

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGGYVDELRKAIRPTF 172
           LG TGARCVA LLSEMKRRGRDSRFGVISMCIG+GMGAAAV ERG YVDELR A RP+F
Sbjct: 394 LGTTGARCVATLLSEMKRRGRDSRFGVISMCIGTGMGAAAVIERGDYVDELRNA-RPSF 451

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BLAST of ClCG08G008970 vs. NCBI nr
Match: gi|659109014|ref|XP_008454504.1| (PREDICTED: 3-ketoacyl-CoA thiolase 1, peroxisomal-like isoform X1 [Cucumis melo])

HSP 1 Score: 297.7 bits (761), Expect = 1.3e-77
Identity = 156/179 (87.15%), Postives = 161/179 (89.94%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LKPAFKK+GCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG
Sbjct: 324 KLKPAFKKNGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 383

Query: 62  IGPA---------AGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           IGPA         AGLTLQDIDLFEINEAFASQYVYCCK+LKLDTEKVNVNGGA  LGHP
Sbjct: 384 IGPAVAIPAAVKSAGLTLQDIDLFEINEAFASQYVYCCKKLKLDTEKVNVNGGAIALGHP 443

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGGYVDELRKAIRPTF 172
           LGATGARCVA LLSEMKRRGRDSRFGVISMCIG+GMGAAAV ERG YVDE   A RP+F
Sbjct: 444 LGATGARCVATLLSEMKRRGRDSRFGVISMCIGTGMGAAAVIERGDYVDEFCNA-RPSF 501

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BLAST of ClCG08G008970 vs. NCBI nr
Match: gi|659109016|ref|XP_008454505.1| (PREDICTED: 3-ketoacyl-CoA thiolase 1, peroxisomal-like isoform X2 [Cucumis melo])

HSP 1 Score: 297.7 bits (761), Expect = 1.3e-77
Identity = 156/179 (87.15%), Postives = 161/179 (89.94%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LKPAFKK+GCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG
Sbjct: 283 KLKPAFKKNGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 342

Query: 62  IGPA---------AGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           IGPA         AGLTLQDIDLFEINEAFASQYVYCCK+LKLDTEKVNVNGGA  LGHP
Sbjct: 343 IGPAVAIPAAVKSAGLTLQDIDLFEINEAFASQYVYCCKKLKLDTEKVNVNGGAIALGHP 402

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGGYVDELRKAIRPTF 172
           LGATGARCVA LLSEMKRRGRDSRFGVISMCIG+GMGAAAV ERG YVDE   A RP+F
Sbjct: 403 LGATGARCVATLLSEMKRRGRDSRFGVISMCIGTGMGAAAVIERGDYVDEFCNA-RPSF 460

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BLAST of ClCG08G008970 vs. NCBI nr
Match: gi|702500971|ref|XP_010038353.1| (PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal [Eucalyptus grandis])

HSP 1 Score: 273.5 bits (698), Expect = 2.6e-70
Identity = 141/174 (81.03%), Postives = 150/174 (86.21%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LKPAF+KDG TTAGN+SQVSDGA AVLLMKRS+A+QKGLPILGVFRSF+ VGVDPAVMG
Sbjct: 279 KLKPAFRKDGATTAGNASQVSDGAGAVLLMKRSVAVQKGLPILGVFRSFAAVGVDPAVMG 338

Query: 62  IGPA---------AGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           IGPA         AGLTL DIDL EINEAFASQYVYCCK+L LD EKVNVNGGA  LGHP
Sbjct: 339 IGPAVAIPAAVKSAGLTLDDIDLLEINEAFASQYVYCCKKLGLDPEKVNVNGGALALGHP 398

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGGYVDELRKA 167
           LGATGARCVA LL+EMKR+GRDSRFGVISMCIGSGMGAAAVFERG   DEL  A
Sbjct: 399 LGATGARCVATLLNEMKRQGRDSRFGVISMCIGSGMGAAAVFERGDCADELCNA 452

[Close]

BLAST of ClCG08G008970 vs. NCBI nr
Match: gi|1009149399|ref|XP_015892458.1| (PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Ziziphus jujuba])

HSP 1 Score: 273.1 bits (697), Expect = 3.3e-70
Identity = 141/174 (81.03%), Postives = 149/174 (85.63%), Query Frame = 1


Query: 2   ELKPAFKKDGCTTAGNSSQVSDGAAAVLLMKRSLAIQKGLPILGVFRSFSVVGVDPAVMG 61
           +LKPAFKK G TTAGN+SQVSDGA AVL+MKRSLA+QKGLPILGV RSF  VGVDPAVMG
Sbjct: 275 KLKPAFKKGGSTTAGNASQVSDGAGAVLVMKRSLALQKGLPILGVLRSFCAVGVDPAVMG 334

Query: 62  IGPA---------AGLTLQDIDLFEINEAFASQYVYCCKELKLDTEKVNVNGGATTLGHP 121
           IGPA         AGL L DIDLFEINEAFASQYVYCCK+L LDTEKVNVNGGA  LGHP
Sbjct: 335 IGPAVAIPAAVKSAGLELDDIDLFEINEAFASQYVYCCKKLALDTEKVNVNGGAMALGHP 394

Query: 122 LGATGARCVAMLLSEMKRRGRDSRFGVISMCIGSGMGAAAVFERGGYVDELRKA 167
           LGATGARCV+ LL+EMKRRG+D RFGVISMCIGSGMGAAAVFERG YVDEL  A
Sbjct: 395 LGATGARCVSTLLNEMKRRGKDCRFGVISMCIGSGMGAAAVFERGDYVDELCNA 448

The following BLAST results are available for this feature:

BLAST of ClCG08G008970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
THIK2_ARATH	3.7e-69	76.44	3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2	[more]
THIK1_ARATH	4.1e-68	75.44	3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=2 SV=2	[more]
THIK5_ARATH	7.7e-67	74.71	3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2	[more]
THIK_HUMAN	1.3e-53	66.87	3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2	[more]
THIKA_MOUSE	1.1e-52	68.07	3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=1 SV=1	[more]

BLAST of ClCG08G008970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBK4_CUCSA	4.0e-78	87.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G624070 PE=3 SV=1	[more]
A0A059A7T5_EUCGR	1.8e-70	81.03	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K03601 PE=3 SV=1	[more]
M5VYZ5_PRUPE	2.3e-70	82.46	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005303mg PE=3 SV=1	[more]
A0A166JDR6_DAUCA	3.0e-70	79.31	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_004712 PE=4 SV=1	[more]
A0A061DNG8_THECC	2.0e-69	81.18	Peroxisomal 3-ketoacyl-CoA thiolase 3 isoform 1 OS=Theobroma cacao GN=TCM_003008...	[more]

BLAST of ClCG08G008970 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33150.1	2.1e-70	76.44	peroxisomal 3-ketoacyl-CoA thiolase 3	[more]
AT1G04710.1	2.3e-69	75.44	peroxisomal 3-ketoacyl-CoA thiolase 4	[more]
AT5G48880.2	4.3e-68	74.71	peroxisomal 3-keto-acyl-CoA thiolase 2	[more]
AT5G48230.2	2.4e-26	42.07	acetoacetyl-CoA thiolase 2	[more]
AT5G47720.2	1.6e-25	39.63	Thiolase family protein	[more]

BLAST of ClCG08G008970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468618\|ref\|XP_004152018.1\|	5.7e-78	87.15	PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal [Cucumis sativus]	[more]
gi\|659109014\|ref\|XP_008454504.1\|	1.3e-77	87.15	PREDICTED: 3-ketoacyl-CoA thiolase 1, peroxisomal-like isoform X1 [Cucumis melo]	[more]
gi\|659109016\|ref\|XP_008454505.1\|	1.3e-77	87.15	PREDICTED: 3-ketoacyl-CoA thiolase 1, peroxisomal-like isoform X2 [Cucumis melo]	[more]
gi\|702500971\|ref\|XP_010038353.1\|	2.6e-70	81.03	PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal [Eucalyptus grandis]	[more]
gi\|1009149399\|ref\|XP_015892458.1\|	3.3e-70	81.03	PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016039	Thiolase-like
IPR020610	Thiolase_AS
IPR020616	Thiolase_N
IPR020617	Thiolase_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005777	peroxisome
molecular_function	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G008970.1	ClCG08G008970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016039	Thiolase-like	GENE3D	G3DSA:3.40.47.10		coord: 2..46 score: 1.3E-13coord: 48..156 score: 1.8
IPR016039	Thiolase-like	unknown	SSF53901	Thiolase-like	coord: 44..156 score: 3.35E-34coord: 2..41 score: 1.7
IPR020610	Thiolase, active site	PROSITE	PS00099	THIOLASE_3	coord: 138..151 scor
IPR020616	Thiolase, N-terminal	PFAM	PF00108	Thiolase_N	coord: 2..34 score: 4.8
IPR020617	Thiolase, C-terminal	PFAM	PF02803	Thiolase_C	coord: 43..156 score: 5.3
None	No IPR available	PANTHER	PTHR18919	ACETYL-COA C-ACYLTRANSFERASE	coord: 3..158 score: 5.5E
None	No IPR available	PANTHER	PTHR18919:SF93	3-KETOACYL-COA THIOLASE 2, PEROXISOMAL	coord: 3..158 score: 5.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG08G008970	Cla021892	Watermelon (97103) v1	wcgwmB400
ClCG08G008970	Cla97C08G151770	Watermelon (97103) v2	wcgwmbB336

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG08G008970	Cucumber (Chinese Long) v3	cucwcgB528
ClCG08G008970	Wax gourd	wcgwgoB619
ClCG08G008970	Wax gourd	wcgwgoB646
ClCG08G008970	Watermelon (Charleston Gray)	wcgwcgB169
ClCG08G008970	Cucumber (Gy14) v1	cgywcgB056
ClCG08G008970	Cucumber (Gy14) v1	cgywcgB500
ClCG08G008970	Cucurbita maxima (Rimu)	cmawcgB171
ClCG08G008970	Cucurbita maxima (Rimu)	cmawcgB175
ClCG08G008970	Cucurbita maxima (Rimu)	cmawcgB684
ClCG08G008970	Cucurbita maxima (Rimu)	cmawcgB710
ClCG08G008970	Cucurbita moschata (Rifu)	cmowcgB163
ClCG08G008970	Cucurbita moschata (Rifu)	cmowcgB166
ClCG08G008970	Cucurbita moschata (Rifu)	cmowcgB714
ClCG08G008970	Wild cucumber (PI 183967)	cpiwcgB435
ClCG08G008970	Wild cucumber (PI 183967)	cpiwcgB535
ClCG08G008970	Cucumber (Chinese Long) v2	cuwcgB508
ClCG08G008970	Melon (DHL92) v3.5.1	mewcgB296
ClCG08G008970	Cucurbita pepo (Zucchini)	cpewcgB123
ClCG08G008970	Cucurbita pepo (Zucchini)	cpewcgB750
ClCG08G008970	Cucurbita pepo (Zucchini)	cpewcgB756
ClCG08G008970	Bottle gourd (USVL1VR-Ls)	lsiwcgB304
ClCG08G008970	Bottle gourd (USVL1VR-Ls)	lsiwcgB438
ClCG08G008970	Cucumber (Gy14) v2	cgybwcgB383
ClCG08G008970	Cucumber (Gy14) v2	cgybwcgB467
ClCG08G008970	Melon (DHL92) v3.6.1	medwcgB289
ClCG08G008970	Silver-seed gourd	carwcgB0129
ClCG08G008970	Silver-seed gourd	carwcgB0130
ClCG08G008970	Silver-seed gourd	carwcgB0205