ClCG08G008130 (gene) Watermelon (Charleston Gray)

NameClCG08G008130
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr08 : 20658143 .. 20660589 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATTTTTGGTGCTAGCTACCCTACCCCATGAAACATATTTGCCAAGGTAGAAAACAAATAGATATTTAAAAACATGTAAGGTTATCCAATGGACCATGATACAATATCATATTGATTTGTCCAAAATATCTTGGATGGGTGTTTTCAAATGTCAATATCAATTAGGGCTTTGTTTTATTGTTTATATTCTTGGAAACAATTAATGACAGGCAATGATGAGAATGTTTTAAAAGTTTCCTTTCAATGACAGTATGGCACCACTTGAGTGTTCTCATTAAGCACAAATTCAAATATCCAATTGAGTTTTAAACCTGAAACAATGGGACACCACTTCAATATTCTCACCCCAAAATTAAAATATCCAATTGGGTTAGAAATAAAGACCAACCTGTTTACCAATTTATAATAAAAAATAGTGTAATCGTAATGAAATTTCATTAATAGATCAATCGTAATAGTGTAATCGTAATGAAATTTCATTAATAGATCAATTGTAATAGATCACAATCGCAAATGTATATCACGAATTATGAATCTGTCACATTTACTCTTACCGTTATTGTTATTATTATGTTTTAGGATCAAACAGTAATGGTAATGGTAAATTATTCCTAAGGAAATAAATATTAATAAAATATTTAATTTTATAAGTGACTATGGTAGTGCCTATTTTTCAATTCAAGATTTTTTTTTTTTTTTTTTTTTTTGTCTACATAAATGTTATTATCACCCACTAAACTAAAAGGAGGCGTTTTGAGCACTGAATTAGTTATTATAATCTATGAGTTATATTACTATTTTAGTCTACATAATATCTAATACTTGTATGGACTTGTGCACAATTGCGCAGCCTCAACAATCACAAACTGCAAGTTAGAGCCAATGTTGTTAATGGTGTGGGTTATGATTTGTCAGAGTTGAGCTACTTGGTGGAGGAGATTGTCTCCTTATCTTTGGTCGCTCAGGTGGTCTCCTTCATGTGGTGCTCGAGAGAGGCGAATGGGGTGGCACATCATCTCGCTCGTCTAGTGGTGTCTTTTGGTAATTTTGGCTTTTGTTTTGTAAATATAGCTTCTTCCTTCTCCAAAGAAGTTGTTACAGACTCTTTTGAACTTCCTGTTTGGTTTCCTCTACTATTTTTTAGAAGGCAGGTATATGAGACTCGATTCTAGTTTGGTTTTATAGATCTTAAAAAAAATAAAAATAAAAAAATCACAAACTGATGTTCCCAAGATAAGGACTTGGTATGGACTTATGCTTCCAAACCAAAGAAAACTATTAACTTAAAGCCTTTGTCTCATAGAGCTTATACATAGTGTGGGCGTTTGTATCACAATGGTAACACTTGGTGGGGAGGTTTGTGCGAGAGCACCAAAGTTAGAGATATATCAGGATTGTTGATTGGAAAATAATTAGGGCATAAGGGTAATTAACTAGGTGCATCTTGGTTATAAATAGAGTGTGTTAGGGACCTTCGAGGAGAGAAGATTTTAGAAATAATTTCCATTGTGGGAATTTTGGGAGAGTGTAACTTTCTCGAAAAGCTATGTTATGTTGTAACTTCTTTAGATATTACAATATACATTTCTATCTTTTCGTGTCCCTCGTGTTCTTTATTGTTCTTATTAGGTGGTAATCTAATAGTTTACTGATCAATGGTCGCTAACACTTGCATGTCAAACACGGATCACTTAAGATGCAATCATGTCAACACTAATCCACAGAATCTCGTCAAGACTCTACAACTAAGCACACTAAACTGGATAATCACTTGGAAATTCCTCATGTTGCACTCTTTTTCATATTTTAGTTTCCCTATTTTTTTCGCAACTTGCAAACAACCCCACTAGTATATGCTCATGCACATCGCATTTCTTTTCCTCAGGCATGGGTGCATGGGTCCCACTGACAATTCCAAGCACTTGTGCCTAACCTAAAATGGGTTTAAGCCTCCCAACTGAAACAGCCTCCTATACATTGGAAAATAGACTACTATATATATATATATATAGAAAATGAAGCAATTTACTACAGAATGTTAGGAATTCATGAACTTCTGATGACATTTAAGCAAACACTTGTTTTGAGCTTTTGCTATGAACTAATCCTGAAAAGCCAAACCAAATGAGTGTGGGATTCAAAATATCCAACAGTTTATTTTATGTATAAAAAGTTGAAGATAAACTGATGTCCAGGCAGAACAAGCTCAAACTACAGGACAAATAACAACAATATTACACACTTACAGTATGATACAAGGTCAAACCTCCTTCTAAGGCCAATTTCCTTCCAGCAAGTTTGCAGAAACCAAGAGAATGTAAAATGGTCTTCCAAAGTACATGAGTATCGTTGCAAAAGAAAAACAGCTCTCCTGGAACCTGAAGAATGTATCACATATCTATATACTTATAACTACATAGCTATCTATACATATCTGGCCTAA

mRNA sequence

ATGACATTTTTGGTGCTAGCTACCCTACCCCATGAAACATATTTGCCAAGCCTCAACAATCACAAACTGCAAGTTAGAGCCAATGTTGTTAATGGTGTGGGTTATGATTTGTCAGAGTTGAGCTACTTGGTGGAGGAGATTGTCTCCTTATCTTTGGTCGCTCAGGTGGTCTCCTTCATGTGGTGCTCGAGAGAGGCGAATGGGGTGGCACATCATCTCGCTCGTCTAGTGGTGTCTTTTGCTTCTTCCTTCTCCAAAGAAGTTGTTACAGACTCTTTTGAACTTCCTGTTTGGTTTCCTCTACTATTTTTTAGAAGGCAGTATGATACAAGGTCAAACCTCCTTCTAAGGCCAATTTCCTTCCAGCAAGTTTGCAGAAACCAAGAGAATGTAAAATGGTCTTCCAAAGTACATGAGTATCGTTGCAAAAGAAAAACAGCTCTCCTGGAACCTGAAGAATGTATCACATATCTATATACTTATAACTACATAGCTATCTATACATATCTGGCCTAA

Coding sequence (CDS)

ATGACATTTTTGGTGCTAGCTACCCTACCCCATGAAACATATTTGCCAAGCCTCAACAATCACAAACTGCAAGTTAGAGCCAATGTTGTTAATGGTGTGGGTTATGATTTGTCAGAGTTGAGCTACTTGGTGGAGGAGATTGTCTCCTTATCTTTGGTCGCTCAGGTGGTCTCCTTCATGTGGTGCTCGAGAGAGGCGAATGGGGTGGCACATCATCTCGCTCGTCTAGTGGTGTCTTTTGCTTCTTCCTTCTCCAAAGAAGTTGTTACAGACTCTTTTGAACTTCCTGTTTGGTTTCCTCTACTATTTTTTAGAAGGCAGTATGATACAAGGTCAAACCTCCTTCTAAGGCCAATTTCCTTCCAGCAAGTTTGCAGAAACCAAGAGAATGTAAAATGGTCTTCCAAAGTACATGAGTATCGTTGCAAAAGAAAAACAGCTCTCCTGGAACCTGAAGAATGTATCACATATCTATATACTTATAACTACATAGCTATCTATACATATCTGGCCTAA

Protein sequence

MTFLVLATLPHETYLPSLNNHKLQVRANVVNGVGYDLSELSYLVEEIVSLSLVAQVVSFMWCSREANGVAHHLARLVVSFASSFSKEVVTDSFELPVWFPLLFFRRQYDTRSNLLLRPISFQQVCRNQENVKWSSKVHEYRCKRKTALLEPEECITYLYTYNYIAIYTYLA
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G008130.1ClCG08G008130.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13456RVT_3coord: 28..76
score: 7.

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG08G008130Cucumber (Gy14) v1cgywcgB623
ClCG08G008130Cucurbita maxima (Rimu)cmawcgB271
ClCG08G008130Cucurbita maxima (Rimu)cmawcgB274
ClCG08G008130Cucurbita maxima (Rimu)cmawcgB679
ClCG08G008130Cucurbita maxima (Rimu)cmawcgB680
ClCG08G008130Cucurbita moschata (Rifu)cmowcgB266
ClCG08G008130Cucurbita moschata (Rifu)cmowcgB263
ClCG08G008130Cucurbita moschata (Rifu)cmowcgB369
ClCG08G008130Cucurbita moschata (Rifu)cmowcgB681
ClCG08G008130Cucurbita moschata (Rifu)cmowcgB682
ClCG08G008130Wild cucumber (PI 183967)cpiwcgB523
ClCG08G008130Cucumber (Chinese Long) v2cuwcgB497
ClCG08G008130Melon (DHL92) v3.5.1mewcgB300
ClCG08G008130Watermelon (97103) v1wcgwmB400
ClCG08G008130Watermelon (97103) v1wcgwmB413
ClCG08G008130Cucurbita pepo (Zucchini)cpewcgB055
ClCG08G008130Cucurbita pepo (Zucchini)cpewcgB181
ClCG08G008130Cucurbita pepo (Zucchini)cpewcgB183
ClCG08G008130Cucurbita pepo (Zucchini)cpewcgB416
ClCG08G008130Cucurbita pepo (Zucchini)cpewcgB417
ClCG08G008130Bottle gourd (USVL1VR-Ls)lsiwcgB300
ClCG08G008130Bottle gourd (USVL1VR-Ls)lsiwcgB443
ClCG08G008130Cucumber (Gy14) v2cgybwcgB455
ClCG08G008130Melon (DHL92) v3.6.1medwcgB294
ClCG08G008130Silver-seed gourdcarwcgB0263
ClCG08G008130Silver-seed gourdcarwcgB0663
ClCG08G008130Silver-seed gourdcarwcgB0819
ClCG08G008130Cucumber (Chinese Long) v3cucwcgB515
ClCG08G008130Watermelon (97103) v2wcgwmbB328
ClCG08G008130Watermelon (97103) v2wcgwmbB336
ClCG08G008130Wax gourdwcgwgoB647
ClCG08G008130Watermelon (Charleston Gray)wcgwcgB167