ClCG08G003280 (gene) Watermelon (Charleston Gray)

Overview
NameClCG08G003280
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
Descriptionmyb domain protein 105 LENGTH=330
LocationCG_Chr08 : 8379948 .. 8382197 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAACCTCGACGATATGGACGGTTTTGCAGGGGACGAAACGAAGTCATTTCCTCGGGGACATTGGCGTCCGGCCGAGGATGAGAAGCTTCGACGGTTAGTTCAACAACATGGTGCACAAAACTGGAATTTCATTGCGGAGAAACTACAAGGAAGATCAGGCATGTCTCTTTTTGTAATAACGTTTGACAATTTTCTTTTCTTTTTTTTGTCGTTTTTTTTCTCTCCTTTGTATTGAAAAAGAAAAACAAATGCGTTGTTAATATAACTCTTACTTATTTCATGTTTTTAAAGATTTTAATTTTTCTTAAAAAAAATTGTTAAGTATTCGAGAATTTGAATCTTTAATCTTAAAGAAAAGAAGTACGTATCCATTGTTGTTGAATTATATTCCTGTCGACTTAAAATTAGTTTTAAGTAAGAAATAATTGCTTGAAGACCAAAAATGTTCAAAAGTATTATGCTATATTTAGTTTTTGGAATCATACATCTTTGTACGTACAACAATAGCGGGTGAGTCTACTCCCACATAGTTGAGTGGATATTGGATACAACAACTCCTCTATGTCATTTTAATTTTTTTTTTTTTTTCAAAAGAAAAAAGAAGAAGAAGAATGGAATTTATCGTGCATTCTTATAGATTAGTAATGAATAAAAGTATATTGAATTTATTAATACTCATCTAACAACGAAAATATTAAACAAACATAGAGAGAATTTTAGGCCCCGTATGGTAACTATTTGATTTTGATCNTACGTACAACAATAGCGGGTGAGTCTACTCCCACATAGTTGAGTGGATATTGGATACAACAACTCCTCTATGTCATTTTAATTAATTTTTTTTTTCAAAAGAAAAAAGAAGAAGAAGAATGGAATTTATCGTGCATTCTTATAGATTAGTAATGAATAAAAGTATATTGAATTTATTAATACTCATCTAACAACGAAAATATTAAACAAACATAGAGAGAATTTTAGGCCCCGTATGGTAACTATTTGATTTTGATTAATAGTTTTTAAAAATTAAGCCTATAAACACTCCAATTCTAAATTGTTTACTTGATGATCTAGTTCATACTAATGTTTACATTAACTAAGCCAAAGTTTTGAAAACCATAAAAGTAATTTTTTAATAATTTATTTTTGCTTTTAGAATTTGGCTTAGAATACAACTCTTTTTTATTTAAGATTAGATAATAATAATAAAAAAAAAAAAAAACACTATATAGTAAGTAATGGAGAAGAAATAGACTTCATTTTAAAAATAAAAAACAAAAAGTCAAATAGTTACCAAAATTAAGATCTAAATTTATCAAGACACACTCAGTTATTTAATTGGAGAAAAAGAGAAGACACACACAAAACTTTGCGAAAATATAGGCTTTGATCACTTCTCTTTGGTGATAATTAAAGCTCTTTATTAATTATGATGCTTCTTCTATAGCTTTGAATTAACTTGTTACATGTTTCTCGCAATTATTCTCTAAAAAGAAAGAATTTTAGTAGATCATCATTTTAAAATTAATACATTAATCACAAAGACTCAAGAAACACTTAGATTAAAAACCAAAAGTAATTATAGCACAGGAAACCGAAACTTTATTAAAACCCGACGTTAATCAAATATGTTTTATTTTATTCTTTTTAAATTTCATGAATTAGTTGCATTAATAATTTTGATGATGCAGGGAAGAGTTGTAGATTAAGATGGTTCAATCAACTAGATCCAAGAATAAACAGAAGACCATTCAGTGAAGAAGAAGAAGAAAGGCTTTTAGAAGCTCATGAAATTCATGGCAACAAATGGGCATTAATAGCAAGGCTTTTTCCTGGAAGAACTGATAATGCTGTAAAGAATCATTGGCATGTAATTATGGCAAGAAAACAAAGACAACAATCCAATAATCTCTCTACAACCAACAAAATTAGAAACAATTATCAACAATTTTTCTTCCATTCCAAATTAATCTCTCCCCCAGCGAAATCCGCAATCGCAAGAGCAAGAGCAAGATCGCACCGTGACGGAGGAATGTTCGGTACATTATGGTGGCCGGGACTTCAAACCCCTAACCACCGCTCTGATTATAACTTTAATTTGCTCTTTAGATGTTATCAAAAATCGTTGCATTCGGGGAATTTTAGACCAAATAATCAATCGAAATCGTCAATTAAGTCTGAGATTTTGAATGAACCGGTTGAGAGGAAGGATGTTAAGTTCATAGATTTCCTTGGAGTTGAGCAGTGA

mRNA sequence

ATGCCAAACCTCGACGATATGGACGGTTTTGCAGGGGACGAAACGAAGTCATTTCCTCGGGGACATTGGCGTCCGGCCGAGGATGAGAAGCTTCGACGGTTAGTTCAACAACATGGTGCACAAAACTGGAATTTCATTGCGGAGAAACTACAAGGAAGATCAGGCATGTCTCTTTTTGTAATAACTTGCATTAATAATTTTGATGATGCAGGGAAGAGTTGTAGATTAAGATGGTTCAATCAACTAGATCCAAGAATAAACAGAAGACCATTCAGTGAAGAAGAAGAAGAAAGGCTTTTAGAAGCTCATGAAATTCATGGCAACAAATGGGCATTAATAGCAAGGCTTTTTCCTGGAAGAACTGATAATGCTGTAAAGAATCATTGGCATGTAATTATGGCAAGAAAACAAAGACAACAATCCAATAATCTCTCTACAACCAACAAAATTAGAAACAATTATCAACAATTTTTCTTCCATTCCAAATTAATCTCTCCCCCAGCGAAATCCGCAATCGCAAGAGCAAGAGCAAGATCGCACCGTGACGGAGGAATGTTCGGTACATTATGGTGGCCGGGACTTCAAACCCCTAACCACCGCTCTGATTATAACTTTAATTTGCTCTTTAGATGTTATCAAAAATCGTTGCATTCGGGGAATTTTAGACCAAATAATCAATCGAAATCGTCAATTAAGTCTGAGATTTTGAATGAACCGGTTGAGAGGAAGGATGTTAAGTTCATAGATTTCCTTGGAGTTGAGCAGTGA

Coding sequence (CDS)

ATGCCAAACCTCGACGATATGGACGGTTTTGCAGGGGACGAAACGAAGTCATTTCCTCGGGGACATTGGCGTCCGGCCGAGGATGAGAAGCTTCGACGGTTAGTTCAACAACATGGTGCACAAAACTGGAATTTCATTGCGGAGAAACTACAAGGAAGATCAGGCATGTCTCTTTTTGTAATAACTTGCATTAATAATTTTGATGATGCAGGGAAGAGTTGTAGATTAAGATGGTTCAATCAACTAGATCCAAGAATAAACAGAAGACCATTCAGTGAAGAAGAAGAAGAAAGGCTTTTAGAAGCTCATGAAATTCATGGCAACAAATGGGCATTAATAGCAAGGCTTTTTCCTGGAAGAACTGATAATGCTGTAAAGAATCATTGGCATGTAATTATGGCAAGAAAACAAAGACAACAATCCAATAATCTCTCTACAACCAACAAAATTAGAAACAATTATCAACAATTTTTCTTCCATTCCAAATTAATCTCTCCCCCAGCGAAATCCGCAATCGCAAGAGCAAGAGCAAGATCGCACCGTGACGGAGGAATGTTCGGTACATTATGGTGGCCGGGACTTCAAACCCCTAACCACCGCTCTGATTATAACTTTAATTTGCTCTTTAGATGTTATCAAAAATCGTTGCATTCGGGGAATTTTAGACCAAATAATCAATCGAAATCGTCAATTAAGTCTGAGATTTTGAATGAACCGGTTGAGAGGAAGGATGTTAAGTTCATAGATTTCCTTGGAGTTGAGCAGTGA

Protein sequence

MPNLDDMDGFAGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNLSTTNKIRNNYQQFFFHSKLISPPAKSAIARARARSHRDGGMFGTLWWPGLQTPNHRSDYNFNLLFRCYQKSLHSGNFRPNNQSKSSIKSEILNEPVERKDVKFIDFLGVEQ
Homology
[Close]
BLAST of ClCG08G003280 vs. Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.8e-28
Identity = 61/117 (52.14%), Postives = 73/117 (62.39%), Query Frame = 1 

Query: 20  RGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCINNFDDAGKSCRLRWF 79
           +G W P EDE+LRRLV ++G +NW  I++ + GRSG                KSCRLRW 
Sbjct: 6   KGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSG----------------KSCRLRWC 65

Query: 80  NQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVKNHWHVIMARK 137
           NQL P++  RPFS EE+E +  AH   GNKWA IARL  GRTDNAVKNHW+  + RK
Sbjct: 66  NQLSPQVEHRPFSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]
BLAST of ClCG08G003280 vs. Swiss-Prot
Match: MYBAA_DICDI (Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.8e-24
Identity = 58/138 (42.03%), Postives = 79/138 (57.25%), Query Frame = 1 

Query: 16  KSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCINNFDDAGKSCR 75
           +S  +GHW   EDEKLR LV  HG + W +IA  L            C+ N    G+ CR
Sbjct: 753 ESKAKGHWTKEEDEKLRSLVDLHGTKRWKYIASLL------------CLRN----GRQCR 812

Query: 76  LRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVKNHWHVIMAR 135
            RW NQLDP I R  ++ EE+  +L+AH  +GNKWA I++L PGRT+ A+KNHW+  M R
Sbjct: 813 ERWSNQLDPSIKRDAWTLEEDRIILDAHSKYGNKWAEISKLLPGRTNCAIKNHWNSTMKR 872

Query: 136 KQRQQSNNLSTTNKIRNN 154
           K  ++  + S+   I ++
Sbjct: 873 KLSKKQYDFSSLPPISSS 874

[Close]
BLAST of ClCG08G003280 vs. Swiss-Prot
Match: MYB_XENLA (Transcriptional activator Myb OS=Xenopus laevis GN=myb PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 7.0e-24
Identity = 57/152 (37.50%), Postives = 85/152 (55.92%), Query Frame = 1 

Query: 20  RGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCINNFDDAGKSCRLRWF 79
           +G W   ED+++  LV ++G + W+ IA+ L+GR                 GK CR RW 
Sbjct: 89  KGPWTKEEDQRVIELVHKYGPKRWSVIAKHLKGR----------------IGKQCRERWH 148

Query: 80  NQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQ 139
           N L+P + +  ++EEE+  + EAH+  GN+WA IA+L PGRTDNA+KNHW+  M RK+ Q
Sbjct: 149 NHLNPEVKKSSWTEEEDRTIYEAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKEEQ 208

Query: 140 QS--NNLSTTNK-------IRNNYQQFFFHSK 163
           +    N S TN+        ++N+   F H++
Sbjct: 209 EGYLQNSSKTNQHTIVTNFPKSNHLMTFTHTR 224


HSP 2 Score: 72.0 bits (175), Expect = 1.1e-11
Identity = 36/126 (28.57%), Postives = 60/126 (47.62%), Query Frame = 1 

Query: 6   DMDGFAGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCIN 65
           D DG      +   +  W   EDEKL++LV+Q+G + W  IA  L  R+ +         
Sbjct: 23  DYDGLLSKGKRHLGKTRWTREEDEKLKKLVEQNGTEEWKVIASFLPNRTDV--------- 82

Query: 66  NFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLE-AHEIHGNKWALIARLFPGRTDNA 125
                   C+ RW   L+P + + P+++EE++R++E  H+    +W++IA+   GR    
Sbjct: 83  -------QCQHRWQKVLNPELIKGPWTKEEDQRVIELVHKYGPKRWSVIAKHLKGRIGKQ 132

Query: 126 VKNHWH 131
            +  WH
Sbjct: 143 CRERWH 132

[Close]
BLAST of ClCG08G003280 vs. Swiss-Prot
Match: MYB_MOUSE (Transcriptional activator Myb OS=Mus musculus GN=Myb PE=1 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 1.6e-23
Identity = 59/159 (37.11%), Postives = 87/159 (54.72%), Query Frame = 1 

Query: 20  RGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCINNFDDAGKSCRLRWF 79
           +G W   ED+++  LVQ++G + W+ IA+ L+GR                 GK CR RW 
Sbjct: 92  KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGR----------------IGKQCRERWH 151

Query: 80  NQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQ 139
           N L+P + +  ++EEE+  + +AH+  GN+WA IA+L PGRTDNA+KNHW+  M RK  Q
Sbjct: 152 NHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQ 211

Query: 140 Q---------SNNLSTTNKIRNNYQQFFFHSKLISPPAK 170
           +         S     T+  +NN+   F H+   SPP++
Sbjct: 212 EGYLQEPSKASQTPVATSFQKNNHLMGFGHA---SPPSQ 231


HSP 2 Score: 68.2 bits (165), Expect = 1.5e-10
Identity = 38/127 (29.92%), Postives = 61/127 (48.03%), Query Frame = 1 

Query: 6   DMDGFAGDETKS-FPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCI 65
           D DG      K    +  W   EDEKL++LV+Q+G  +W  IA  L  R+ +        
Sbjct: 25  DYDGLLPKSGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDV-------- 84

Query: 66  NNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNK-WALIARLFPGRTDN 125
                    C+ RW   L+P + + P+++EE++R++E  + +G K W++IA+   GR   
Sbjct: 85  --------QCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGK 135

Query: 126 AVKNHWH 131
             +  WH
Sbjct: 145 QCRERWH 135

[Close]
BLAST of ClCG08G003280 vs. Swiss-Prot
Match: MYBB_XENLA (Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 4.5e-23
Identity = 50/117 (42.74%), Postives = 72/117 (61.54%), Query Frame = 1 

Query: 20  RGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCINNFDDAGKSCRLRWF 79
           +G W   EDEK+  LV+++G ++W  IA++L+GR G                K CR RW 
Sbjct: 83  KGPWTKEEDEKVIELVKKYGTKHWTLIAKQLRGRMG----------------KQCRERWH 142

Query: 80  NQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVKNHWHVIMARK 137
           N L+P + +  ++EEE+  + +AH++ GN+WA IA+L PGRTDNAVKNHW+  + RK
Sbjct: 143 NHLNPEVKKSSWTEEEDRIICQAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRK 183


HSP 2 Score: 68.6 bits (166), Expect = 1.2e-10
Identity = 37/126 (29.37%), Postives = 58/126 (46.03%), Query Frame = 1 

Query: 6   DMDGFAGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCIN 65
           D D    +  ++  +  W P EDE L+ LV++HG   W  IA  L  R+           
Sbjct: 17  DTDSDVPEPKENRVKVKWTPEEDETLKALVKKHGQGEWKTIASNLNNRT----------- 76

Query: 66  NFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNK-WALIARLFPGRTDNA 125
                 + C+ RW   L P + + P+++EE+E+++E  + +G K W LIA+   GR    
Sbjct: 77  -----EQQCQHRWLRVLHPDLVKGPWTKEEDEKVIELVKKYGTKHWTLIAKQLRGRMGKQ 126

Query: 126 VKNHWH 131
            +  WH
Sbjct: 137 CRERWH 126

[Close]
BLAST of ClCG08G003280 vs. TrEMBL
Match: A0A0A0LKW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G229940 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.0e-73
Identity = 145/195 (74.36%), Postives = 153/195 (78.46%), Query Frame = 1 

Query: 64  INNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDN 123
           IN FDD GKSCRLRWFNQLDPRINRRPF+EEEEERLLEAH IHGNKWALIARLFPGRTDN
Sbjct: 53  INYFDDVGKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDN 112

Query: 124 AVKNHWHVIMARKQRQQS--NNLSTTNKIRNNYQQFFFHSKLISPPAKSAIARARARSHR 183
           AVKNHWHVIMARKQRQQS  NNLST  KI N+YQQF  HSKLIS P           SH 
Sbjct: 113 AVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSKLISHP--------HGDSHG 172

Query: 184 DGGMFGTLWWPGLQTPNHRSDYNFNLLFR-CYQKSLHSGNFRPNNQSKSSIKSEILNEPV 243
            GG+FG  W P L+ PN+R DYN NL  R CYQ S  S +FRPN +SKS+IK EILNE V
Sbjct: 173 RGGLFGRFWQPKLRNPNNRWDYNLNLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESV 232

Query: 244 ERKDVKFIDFLGVEQ 256
           ERKD KFIDFLGVEQ
Sbjct: 233 ERKDAKFIDFLGVEQ 239

[Close]
BLAST of ClCG08G003280 vs. TrEMBL
Match: A0A072V0T7_MEDTR (Myb transcription factor OS=Medicago truncatula GN=MTR_3g089045 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 7.7e-54
Identity = 110/173 (63.58%), Postives = 126/173 (72.83%), Query Frame = 1 

Query: 6   DMDGFAGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCIN 65
           D    A ++TKS PRGHWRPAEDEKLR+LV+Q+GAQNWN IAEKLQGRSG          
Sbjct: 2   DDSSSAAEDTKSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSG---------- 61

Query: 66  NFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAV 125
                 KSCRLRWFNQLDPRINRRPF+EEEEERLL AH IHGNKWALIARLFPGRTDNAV
Sbjct: 62  ------KSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAV 121

Query: 126 KNHWHVIMARKQRQQSNNLSTTNKIRNNYQQFFFHSKLISPPAKSAIARARAR 179
           KNHWHVIMARKQR+QS         + ++Q+ F +S +++ P  + I     R
Sbjct: 122 KNHWHVIMARKQREQSKLCG-----KRSFQEVFSNSSILNFPYTTRIGYENGR 153

[Close]
BLAST of ClCG08G003280 vs. TrEMBL
Match: A0A0B2QTM6_GLYSO (Transcription factor MYB44 OS=Glycine soja GN=glysoja_015741 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.8e-53
Identity = 104/134 (77.61%), Postives = 112/134 (83.58%), Query Frame = 1 

Query: 8   DGFAGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCINNF 67
           D  AG++TK+ PRGHWRPAEDEKLR+LV+Q+GAQNWN IAEKLQGRSG            
Sbjct: 3   DSSAGEDTKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSG------------ 62

Query: 68  DDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVKN 127
               KSCRLRWFNQLDPRINRRPF+EEEEERLL AH IHGNKWALIARLFPGRTDNAVKN
Sbjct: 63  ----KSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKN 120

Query: 128 HWHVIMARKQRQQS 142
           HWHVIMARKQR+QS
Sbjct: 123 HWHVIMARKQREQS 120

[Close]
BLAST of ClCG08G003280 vs. TrEMBL
Match: K7KUM6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G121200 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.8e-53
Identity = 104/134 (77.61%), Postives = 112/134 (83.58%), Query Frame = 1 

Query: 8   DGFAGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCINNF 67
           D  AG++TK+ PRGHWRPAEDEKLR+LV+Q+GAQNWN IAEKLQGRSG            
Sbjct: 3   DSSAGEDTKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSG------------ 62

Query: 68  DDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVKN 127
               KSCRLRWFNQLDPRINRRPF+EEEEERLL AH IHGNKWALIARLFPGRTDNAVKN
Sbjct: 63  ----KSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKN 120

Query: 128 HWHVIMARKQRQQS 142
           HWHVIMARKQR+QS
Sbjct: 123 HWHVIMARKQREQS 120

[Close]
BLAST of ClCG08G003280 vs. TrEMBL
Match: A0A0B2SHG3_GLYSO (Transcription factor MYB44 OS=Glycine soja GN=glysoja_024488 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 8.6e-53
Identity = 103/134 (76.87%), Postives = 112/134 (83.58%), Query Frame = 1 

Query: 8   DGFAGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCINNF 67
           D  AG++T++ PRGHWRPAEDEKLR+LV+Q+GAQNWN IAEKLQGRSG            
Sbjct: 3   DSSAGEDTRTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSG------------ 62

Query: 68  DDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVKN 127
               KSCRLRWFNQLDPRINRRPF+EEEEERLL AH IHGNKWALIARLFPGRTDNAVKN
Sbjct: 63  ----KSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKN 120

Query: 128 HWHVIMARKQRQQS 142
           HWHVIMARKQR+QS
Sbjct: 123 HWHVIMARKQREQS 120

[Close]
BLAST of ClCG08G003280 vs. TAIR10
Match: AT1G69560.1 (AT1G69560.1 myb domain protein 105)

HSP 1 Score: 190.3 bits (482), Expect = 1.5e-48
Identity = 110/249 (44.18%), Postives = 138/249 (55.42%), Query Frame = 1 

Query: 17  SFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCINNFDDAGKSCRL 76
           S  RGHWRPAED KL+ LV  +G QNWN IAEKLQGRSG                KSCRL
Sbjct: 104 SVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSG----------------KSCRL 163

Query: 77  RWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVKNHWHVIMARK 136
           RWFNQLDPRINRR F+EEEEERL++AH ++GNKWA+IARLFPGRTDN+VKNHWHVIMARK
Sbjct: 164 RWFNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARK 223

Query: 137 QRQQSNNLSTTNKIRN-----NYQQFFFHSKLISPPAKSAIARARARSHRDGGMFGTLWW 196
            R+QS++      + +     N     F+      P + A+    +  H+       L  
Sbjct: 224 FREQSSSYRRRKTMVSLKPLINPNPHIFND---FDPTRLALTHLASSDHKQ------LML 283

Query: 197 PGLQTPNHRSDYNFNLLFRCYQKSLHSGNFRPNNQSKSSI-------KSEILNEPVERKD 254
           P    P +  +    L+   ++  +  G++    Q  ++        KSEI     E K 
Sbjct: 284 PVPCFPGYDHENESPLMVDMFETQMMVGDYIAWTQEATTFDFLNQTGKSEIFERINEEKK 327

[Close]
BLAST of ClCG08G003280 vs. TAIR10
Match: AT1G26780.2 (AT1G26780.2 myb domain protein 117)

HSP 1 Score: 183.7 bits (465), Expect = 1.4e-46
Identity = 87/134 (64.93%), Postives = 98/134 (73.13%), Query Frame = 1 

Query: 20  RGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCINNFDDAGKSCRLRWF 79
           RGHWRPAED KL+ LV  +G QNWN IAEKLQGRSG                KSCRLRWF
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSG----------------KSCRLRWF 157

Query: 80  NQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQ 139
           NQLDPRINRR F+EEEEERL++AH ++GNKWA+IARLFPGRTDN+VKNHWHV+MARK R+
Sbjct: 158 NQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYRE 215

Query: 140 QSNNLSTTNKIRNN 154
            S+       + NN
Sbjct: 218 HSSAYRRRKLMSNN 215

[Close]
BLAST of ClCG08G003280 vs. TAIR10
Match: AT1G73410.1 (AT1G73410.1 myb domain protein 54)

HSP 1 Score: 182.2 bits (461), Expect = 4.1e-46
Identity = 87/122 (71.31%), Postives = 93/122 (76.23%), Query Frame = 1 

Query: 20  RGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCINNFDDAGKSCRLRWF 79
           RGHWRPAEDEKL+ LV+Q+G  NWN IA KL GRSG                KSCRLRWF
Sbjct: 6   RGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSG----------------KSCRLRWF 65

Query: 80  NQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQ 139
           NQLDPRINR PF+EEEEERLL AH IHGN+W++IARLFPGRTDNAVKNHWHVIMAR+ RQ
Sbjct: 66  NQLDPRINRNPFTEEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQ 111

Query: 140 QS 142
            S
Sbjct: 126 TS 111

[Close]
BLAST of ClCG08G003280 vs. TAIR10
Match: AT1G17950.1 (AT1G17950.1 myb domain protein 52)

HSP 1 Score: 181.4 bits (459), Expect = 6.9e-46
Identity = 85/122 (69.67%), Postives = 93/122 (76.23%), Query Frame = 1 

Query: 20  RGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCINNFDDAGKSCRLRWF 79
           RGHWRPAEDEKLR LV+Q G  NWN IA+KL GRSG                KSCRLRWF
Sbjct: 5   RGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSG----------------KSCRLRWF 64

Query: 80  NQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQ 139
           NQLDPRINR PF+EEEEERLL +H IHGN+W++IAR FPGRTDNAVKNHWHVIMAR+ R+
Sbjct: 65  NQLDPRINRNPFTEEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRE 110

Query: 140 QS 142
           +S
Sbjct: 125 RS 110

[Close]
BLAST of ClCG08G003280 vs. TAIR10
Match: AT4G33450.1 (AT4G33450.1 myb domain protein 69)

HSP 1 Score: 174.5 bits (441), Expect = 8.5e-44
Identity = 104/252 (41.27%), Postives = 136/252 (53.97%), Query Frame = 1 

Query: 17  SFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCINNFDDAGKSCRL 76
           S  RGHWRP ED+ LR+LV+Q+G +NWNFIA+ L GRSG                KSCRL
Sbjct: 16  SCQRGHWRPVEDDNLRQLVEQYGPKNWNFIAQHLYGRSG----------------KSCRL 75

Query: 77  RWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVKNHWHVIMARK 136
           RW+NQLDP I ++PF+EEEEERLL+AH I GN+WA IARLFPGRTDNAVKNH+HVIMAR+
Sbjct: 76  RWYNQLDPNITKKPFTEEEEERLLKAHRIQGNRWASIARLFPGRTDNAVKNHFHVIMARR 135

Query: 137 QRQQSNNLSTTNKIRNNYQQFFFHSKLISPPAKSAIARARARSHRDGGMFGTLWWPGLQT 196
           +R+  ++ + T+     +      S  ++   +S     R R  +  G    LW     +
Sbjct: 136 KRENFSS-TATSTFNQTWHTVLSPSSSLTRLNRSHFGLWRYRKDKSCG----LWPYSFVS 195

Query: 197 PNHRSDYN----FNLLFRCYQKSLHSGNF-RPNN----------QSKSSIKSEILNEPVE 254
           P     +      N+    Y +   S     P N          +  S+     + +  E
Sbjct: 196 PPTNGQFGSSSVSNVHHEIYLERRKSKELVDPQNYTFHAATPDHKMTSNEDGPSMGDDGE 246

[Close]
BLAST of ClCG08G003280 vs. NCBI nr
Match: gi|659090032|ref|XP_008445798.1| (PREDICTED: transcriptional activator Myb-like [Cucumis melo])

HSP 1 Score: 339.0 bits (868), Expect = 7.4e-90
Identity = 175/252 (69.44%), Postives = 187/252 (74.21%), Query Frame = 1 

Query: 7   MDGFAGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCINN 66
           M G AGD+ KS PRGHWRPAEDEKLR+LVQQHG QNWNFIAEKLQGRSG           
Sbjct: 1   MAGVAGDDAKSCPRGHWRPAEDEKLRQLVQQHGPQNWNFIAEKLQGRSG----------- 60

Query: 67  FDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVK 126
                KSCRLRWFNQLDPRINRRPF+EEEEERLLEAH IHGNKWALIARLFPGRTDNAVK
Sbjct: 61  -----KSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVK 120

Query: 127 NHWHVIMARKQRQQS--NNLSTTNKIRNNYQQFFFHSKLISPPAKSAIARARARSHRDGG 186
           NHWHVIMARKQRQQS  NNL T  KI +NYQQF  HSKLIS         +    H  G 
Sbjct: 121 NHWHVIMARKQRQQSNNNNLPTRKKITSNYQQFLLHSKLIS--------HSHGDGHGGGE 180

Query: 187 MFGTLWWPGLQTPNHRSDYNFNLLFR-CYQKSLHSGNFRPNNQSKSSIKSEILNEPVERK 246
           +FG  W P ++ PN+R DYN N+  R CYQ S  S NFR N +SKS+IK EILNE VERK
Sbjct: 181 LFGRFWQPKIRNPNNRWDYNLNMFLRSCYQNSFRSENFRLNIRSKSTIKFEILNESVERK 228

Query: 247 DVKFIDFLGVEQ 256
           D KFIDFLGVEQ
Sbjct: 241 DAKFIDFLGVEQ 228

[Close]
BLAST of ClCG08G003280 vs. NCBI nr
Match: gi|700206590|gb|KGN61709.1| (hypothetical protein Csa_2G229940 [Cucumis sativus])

HSP 1 Score: 283.9 bits (725), Expect = 2.8e-73
Identity = 145/195 (74.36%), Postives = 153/195 (78.46%), Query Frame = 1 

Query: 64  INNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDN 123
           IN FDD GKSCRLRWFNQLDPRINRRPF+EEEEERLLEAH IHGNKWALIARLFPGRTDN
Sbjct: 53  INYFDDVGKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDN 112

Query: 124 AVKNHWHVIMARKQRQQS--NNLSTTNKIRNNYQQFFFHSKLISPPAKSAIARARARSHR 183
           AVKNHWHVIMARKQRQQS  NNLST  KI N+YQQF  HSKLIS P           SH 
Sbjct: 113 AVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSKLISHP--------HGDSHG 172

Query: 184 DGGMFGTLWWPGLQTPNHRSDYNFNLLFR-CYQKSLHSGNFRPNNQSKSSIKSEILNEPV 243
            GG+FG  W P L+ PN+R DYN NL  R CYQ S  S +FRPN +SKS+IK EILNE V
Sbjct: 173 RGGLFGRFWQPKLRNPNNRWDYNLNLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESV 232

Query: 244 ERKDVKFIDFLGVEQ 256
           ERKD KFIDFLGVEQ
Sbjct: 233 ERKDAKFIDFLGVEQ 239

[Close]
BLAST of ClCG08G003280 vs. NCBI nr
Match: gi|922382279|ref|XP_013461367.1| (myb transcription factor [Medicago truncatula])

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-53
Identity = 110/173 (63.58%), Postives = 126/173 (72.83%), Query Frame = 1 

Query: 6   DMDGFAGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCIN 65
           D    A ++TKS PRGHWRPAEDEKLR+LV+Q+GAQNWN IAEKLQGRSG          
Sbjct: 2   DDSSSAAEDTKSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSG---------- 61

Query: 66  NFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAV 125
                 KSCRLRWFNQLDPRINRRPF+EEEEERLL AH IHGNKWALIARLFPGRTDNAV
Sbjct: 62  ------KSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAV 121

Query: 126 KNHWHVIMARKQRQQSNNLSTTNKIRNNYQQFFFHSKLISPPAKSAIARARAR 179
           KNHWHVIMARKQR+QS         + ++Q+ F +S +++ P  + I     R
Sbjct: 122 KNHWHVIMARKQREQSKLCG-----KRSFQEVFSNSSILNFPYTTRIGYENGR 153

[Close]
BLAST of ClCG08G003280 vs. NCBI nr
Match: gi|356518595|ref|XP_003527964.1| (PREDICTED: transcription factor LAF1-like [Glycine max])

HSP 1 Score: 216.5 bits (550), Expect = 5.5e-53
Identity = 104/134 (77.61%), Postives = 112/134 (83.58%), Query Frame = 1 

Query: 8   DGFAGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCINNF 67
           D  AG++TK+ PRGHWRPAEDEKLR+LV+Q+GAQNWN IAEKLQGRSG            
Sbjct: 3   DSSAGEDTKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSG------------ 62

Query: 68  DDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVKN 127
               KSCRLRWFNQLDPRINRRPF+EEEEERLL AH IHGNKWALIARLFPGRTDNAVKN
Sbjct: 63  ----KSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKN 120

Query: 128 HWHVIMARKQRQQS 142
           HWHVIMARKQR+QS
Sbjct: 123 HWHVIMARKQREQS 120

[Close]
BLAST of ClCG08G003280 vs. NCBI nr
Match: gi|1012358720|gb|KYP69904.1| (Transcription factor MYB44 [Cajanus cajan])

HSP 1 Score: 215.3 bits (547), Expect = 1.2e-52
Identity = 103/134 (76.87%), Postives = 112/134 (83.58%), Query Frame = 1 

Query: 8   DGFAGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITCINNF 67
           D  AG++TK+ PRGHWRPAEDEKL++LV+Q+GAQNWN IAEKLQGRSG            
Sbjct: 3   DSSAGEDTKTCPRGHWRPAEDEKLKQLVEQYGAQNWNSIAEKLQGRSG------------ 62

Query: 68  DDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVKN 127
               KSCRLRWFNQLDPRINRRPF+EEEEERLL AH IHGNKWALIARLFPGRTDNAVKN
Sbjct: 63  ----KSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKN 120

Query: 128 HWHVIMARKQRQQS 142
           HWHVIMARKQR+QS
Sbjct: 123 HWHVIMARKQREQS 120

The following BLAST results are available for this feature:
BLAST of ClCG08G003280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYB44_ARATH2.8e-2852.14Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1[more]
MYBAA_DICDI1.8e-2442.03Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1[more]
MYB_XENLA7.0e-2437.50Transcriptional activator Myb OS=Xenopus laevis GN=myb PE=2 SV=1[more]
MYB_MOUSE1.6e-2337.11Transcriptional activator Myb OS=Mus musculus GN=Myb PE=1 SV=2[more]
MYBB_XENLA4.5e-2342.74Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2[more]
BLAST of ClCG08G003280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKW9_CUCSA2.0e-7374.36Uncharacterized protein OS=Cucumis sativus GN=Csa_2G229940 PE=4 SV=1[more]
A0A072V0T7_MEDTR7.7e-5463.58Myb transcription factor OS=Medicago truncatula GN=MTR_3g089045 PE=4 SV=1[more]
A0A0B2QTM6_GLYSO3.8e-5377.61Transcription factor MYB44 OS=Glycine soja GN=glysoja_015741 PE=4 SV=1[more]
K7KUM6_SOYBN3.8e-5377.61Uncharacterized protein OS=Glycine max GN=GLYMA_06G121200 PE=4 SV=1[more]
A0A0B2SHG3_GLYSO8.6e-5376.87Transcription factor MYB44 OS=Glycine soja GN=glysoja_024488 PE=4 SV=1[more]
BLAST of ClCG08G003280 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69560.11.5e-4844.18 myb domain protein 105[more]
AT1G26780.21.4e-4664.93 myb domain protein 117[more]
AT1G73410.14.1e-4671.31 myb domain protein 54[more]
AT1G17950.16.9e-4669.67 myb domain protein 52[more]
AT4G33450.18.5e-4441.27 myb domain protein 69[more]
BLAST of ClCG08G003280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090032|ref|XP_008445798.1|7.4e-9069.44PREDICTED: transcriptional activator Myb-like [Cucumis melo][more]
gi|700206590|gb|KGN61709.1|2.8e-7374.36hypothetical protein Csa_2G229940 [Cucumis sativus][more]
gi|922382279|ref|XP_013461367.1|1.1e-5363.58myb transcription factor [Medicago truncatula][more]
gi|356518595|ref|XP_003527964.1|5.5e-5377.61PREDICTED: transcription factor LAF1-like [Glycine max][more]
gi|1012358720|gb|KYP69904.1|1.2e-5276.87Transcription factor MYB44 [Cajanus cajan][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050794 regulation of cellular process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G003280.1ClCG08G003280.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 20..55
score: 4.0E-10coord: 88..130
score: 1.5
IPR001005SANT/Myb domainSMARTSM00717santcoord: 19..84
score: 1.3E-4coord: 87..135
score: 1.4
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 21..89
score: 9.9E-25coord: 90..136
score: 4.2
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 18..129
score: 7.11
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 15..68
score: 12.775coord: 83..137
score: 28
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 71..156
score: 1.6E-80coord: 20..54
score: 1.6
NoneNo IPR availablePANTHERPTHR10641:SF473MYB TRANSCRIPTION FACTORcoord: 71..156
score: 1.6E-80coord: 20..54
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG08G003280Cla97C08G146960Watermelon (97103) v2wcgwmbB336
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG08G003280Wax gourdwcgwgoB617
ClCG08G003280Wax gourdwcgwgoB636
ClCG08G003280Watermelon (Charleston Gray)wcgwcgB153
ClCG08G003280Cucumber (Gy14) v1cgywcgB622
ClCG08G003280Wild cucumber (PI 183967)cpiwcgB540
ClCG08G003280Cucumber (Chinese Long) v2cuwcgB513
ClCG08G003280Bottle gourd (USVL1VR-Ls)lsiwcgB439
ClCG08G003280Cucumber (Gy14) v2cgybwcgB472
ClCG08G003280Cucumber (Chinese Long) v3cucwcgB533