ClCG08G002200 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCAAATCTCATGAGTAGTGTTTCGTTCTTGCTCTCGCTCGCTTTGATCTGTCACTAATCTCGCTCTCGCTCTCTCTAGTTTCGCTCTCGCTCTCGCTGATCTCGCTCTTGCTAGTAAAGTAACAGAATCCCAAATTTCTTGGTGGGTTCAAACCTTTTGGGGATTTGGGTATTCTGTCACTTTTGCCTGAGAATGTCTATTTTATTTGTGTATGTTAGCATGTATTCTCATGTTCATAGTGCCCTGTTGTGTGTTATATGTAGGGATTTAATGGAGCCAAGGATCTTGCCTCAGGACTACTTCAAGGCACAGTTGACATCATGTAGTCATTTAGTTCACACTCGGGATGCACTTAAGGAAGTTATATAGGGTCCAGTTAGATATGTTTAGGCAAACCATTTTTGGACCCATCCTAGACTGTAGCCTCGTCCTTAATGGCCCGTTGATACACCTCCTACTTCCTAGGGAGGTAAGAGACGAGAGGTCAGACGTAATTTCCTTCAACCTTTTTAGGAATATAGTGTCCTTTAGTAAGAATGAGTTTGACCTTGTAACTAGGTTCAAGGTTAGAACAAGGAATATACAGAGGTCGGCAAACCCGAGTAGGTTTAGGAGGCTATATTTCGAGAACCAAACCAACAAAAAACAGTGGGAGGCAAAGAATGAGTTCGTAGCCATACAGTTTAGGAGTGATGAGGATGCAGTGAAGGTCGCACTTGCATTCTTCATTGACTACGTTATGATGGGAATGGAGAATAAACAAAAGTTTGACCATAATCTCCTAGGGCTAGTAGATGACTGTGAGGTATTCTGTAATTACGACTAGAGTGGGGTGATTTTTAGTAAGACAATCACCAGCCTAAAGAGAGCTCTTACTCCTACTATAAACCTTGGAAACCCCACCAAGACTGTGCGATACACGCTATATCGCTTCCCTATAGTCTTCCAAATTAGATAATATTTTGTTTCTCTAAGATTAATATTTTTTTCCTTTCTTCATCATGTATTAAATTTAACTCTCTTTCTTTGTTTAGGTGTGGGCGTATGAAACAATTTCGTCCCTTACGAACCGGGTTGTCGTTCGTGCCAATGAGACGGCGATACCACGTCTCTCAAGGTGGGTGTGTAATACCTCCCCATCATACAACATCCTCTGTAAGGATTTCGACTCAAATCATGAAAGGAAACTAACCGTCTTATTGTTACATCTTAATTCTTATTATGTCTTGTTTCATAGTTTAGTCATGTAACCCATTCTACGTGTTGGTAGCTAGTGCGAAGAAGGTAGCCTATATGCAGCGGGTAGCACGGGCACCTAAGGCATGTGTACTGTCTTTCGACTCCATCAACGTTCGCATACAGGGACCGCTACTATGTCTTGCTGAAGGTCAGTAGGAGGTCCTTGTGGAAGAGAGAGGCAACAATCATGGGGACAATCGTGAGGAGGATGAAGTAGATGAGGGTGGGGAGGACAATGTCCAGAAGATGTATGATGACGAGGTGGATGACGGTAGGGAAGATGCTCGTGAGGAGGACGTTGTCTAGGAGATGCACAATGACAACGTGGCAGATGAGGGGGTGGAGGATGCTTGTCATGAGGACGTATTCCACGAAGGCCCAGTTCATCATCATGTCCGTGACGAGACCATACCTGACGTCCACGGTAGTAGTCCCCATTTCAACAACGAGCTTAGATGGATAGAGACCCGTTTAGAGTAGTTTTAGATCGGGTGATGATAGAATTTGCCACCATGAGGTCACAACTCGGTACGATGAGTTCTGAGTTTGCTGATGTGAAGCACGACCTCTCTGCTATTATGCGATATTTGCGGGAGCTGTCGAAGGTATTTTATTTTCCATTAAATTTAAGTTACTTTGTTGTATGGCTTATAGTAGAGTTTTCTAAACTGTTATTTATTCGCATACTGCAGGGTAAATATGTGGATGCACCATGGTTTGGTGGAACTTGGGATGGGAATGACGAAGGTGAGGGAGGTGGTGACGACATGACATCTGATGATGAGGATGATATCGAATACCATGTCGAGCAGCAGGCAGACTGA ATGCCCAAATCTCATGATTTCGCTCTCGCTCTCGCTGATCTCGCTCTTGCTAGTAAAGTAACAGAATCCCAAATTTCTTGGTGGGTTCAAACCTTTTGGGGATTTGGGTATTCTGGATTTAATGGAGCCAAGGATCTTGCCTCAGGACTACTTCAAGGCACAGTTGACATCATGAAGTTATATAGGGTCCAGTTAGATATGTTTAGGCAAACCATTTTTGGACCCATCCTAGACTGTAGCCTCGTCCTTAATGGCCCGTTGATACACCTCCTACTTCCTAGGGAGGTAAGAGACGAGAGGTCAGACGTAATTTCCTTCAACCTTTTTAGGAATATAGTGTCCTTTAGTAAGAATGAGTTTGACCTTGTAACTAGGTTCAAGGTTAGAACAAGGAATATACAGAGGTCGGCAAACCCGAGTAGGTTTAGGAGGCTATATTTCGAGAACCAAACCAACAAAAAACAGTGGGAGGCAAAGAATGAGTTCGTAGCCATACAGTTTAGGAGTGATGAGGATGCAGTGAAGGTCGCACTTGCATTCTTCATTGACTACGTTATGATGGGAATGGAGAATAAACAAAAGTTTGACCATAATCTCCTAGGGCTAGTAGATGACTGTGAGACAATCACCAGCCTAAAGAGAGCTCTTACTCCTACTATAAACCTTGGAAACCCCACCAAGACTGTGCGATACACGCTATATCGCTTCCCTATAGTGTGGGCGTATGAAACAATTTCGTCCCTTACGAACCGGGTTGTCGTTCGTGCCAATGAGACGGCGATACCACGTCTCTCAAGGTGGTCATGTAACCCATTCTACGTGTTGGTAGCTAGTGCGAAGAAGGTAGCCTATATGCAGCGGGTAGCACGGGCACCTAAGGCATGTGTACTGTCTTTCGACTCCATCAACGAGGTCCTTGTGGAAGAGAGAGGCAACAATCATGGGGACAATCGTGAGGAGGATGAAGTAGATGAGGGTGGGGAGGACAATGTCCAGAAGATGTATGATGACGAGGAGATGCACAATGACAACGTGGCAGATGAGGGGGTGGAGGATGCTTGTCATGAGGACGTATTCCACGAAGGCCCAGTTCATCATCATGTCCGTGACGAGACCATACCTGACGTCCACGGTAGTATAGTTTTAGATCGGGTGATGATAGAATTTGCCACCATGAGGTCACAACTCGGTACGATGAGTTCTGAGTTTGCTGATGTGAAGCACGACCTCTCTGCTATTATGCGATATTTGCGGGAGCTGTCGAAGGGTAAATATGTGGATGCACCATGGTTTGGTGGAACTTGGGATGGGAATGACGAAGGTGAGGGAGGTGGTGACGACATGACATCTGATGATGAGGATGATATCGAATACCATGTCGAGCAGCAGGCAGACTGA ATGCCCAAATCTCATGATTTCGCTCTCGCTCTCGCTGATCTCGCTCTTGCTAGTAAAGTAACAGAATCCCAAATTTCTTGGTGGGTTCAAACCTTTTGGGGATTTGGGTATTCTGGATTTAATGGAGCCAAGGATCTTGCCTCAGGACTACTTCAAGGCACAGTTGACATCATGAAGTTATATAGGGTCCAGTTAGATATGTTTAGGCAAACCATTTTTGGACCCATCCTAGACTGTAGCCTCGTCCTTAATGGCCCGTTGATACACCTCCTACTTCCTAGGGAGGTAAGAGACGAGAGGTCAGACGTAATTTCCTTCAACCTTTTTAGGAATATAGTGTCCTTTAGTAAGAATGAGTTTGACCTTGTAACTAGGTTCAAGGTTAGAACAAGGAATATACAGAGGTCGGCAAACCCGAGTAGGTTTAGGAGGCTATATTTCGAGAACCAAACCAACAAAAAACAGTGGGAGGCAAAGAATGAGTTCGTAGCCATACAGTTTAGGAGTGATGAGGATGCAGTGAAGGTCGCACTTGCATTCTTCATTGACTACGTTATGATGGGAATGGAGAATAAACAAAAGTTTGACCATAATCTCCTAGGGCTAGTAGATGACTGTGAGACAATCACCAGCCTAAAGAGAGCTCTTACTCCTACTATAAACCTTGGAAACCCCACCAAGACTGTGCGATACACGCTATATCGCTTCCCTATAGTGTGGGCGTATGAAACAATTTCGTCCCTTACGAACCGGGTTGTCGTTCGTGCCAATGAGACGGCGATACCACGTCTCTCAAGGTGGTCATGTAACCCATTCTACGTGTTGGTAGCTAGTGCGAAGAAGGTAGCCTATATGCAGCGGGTAGCACGGGCACCTAAGGCATGTGTACTGTCTTTCGACTCCATCAACGAGGTCCTTGTGGAAGAGAGAGGCAACAATCATGGGGACAATCGTGAGGAGGATGAAGTAGATGAGGGTGGGGAGGACAATGTCCAGAAGATGTATGATGACGAGGAGATGCACAATGACAACGTGGCAGATGAGGGGGTGGAGGATGCTTGTCATGAGGACGTATTCCACGAAGGCCCAGTTCATCATCATGTCCGTGACGAGACCATACCTGACGTCCACGGTAGTATAGTTTTAGATCGGGTGATGATAGAATTTGCCACCATGAGGTCACAACTCGGTACGATGAGTTCTGAGTTTGCTGATGTGAAGCACGACCTCTCTGCTATTATGCGATATTTGCGGGAGCTGTCGAAGGGTAAATATGTGGATGCACCATGGTTTGGTGGAACTTGGGATGGGAATGACGAAGGTGAGGGAGGTGGTGACGACATGACATCTGATGATGAGGATGATATCGAATACCATGTCGAGCAGCAGGCAGACTGA MPKSHDFALALADLALASKVTESQISWWVQTFWGFGYSGFNGAKDLASGLLQGTVDIMKLYRVQLDMFRQTIFGPILDCSLVLNGPLIHLLLPREVRDERSDVISFNLFRNIVSFSKNEFDLVTRFKVRTRNIQRSANPSRFRRLYFENQTNKKQWEAKNEFVAIQFRSDEDAVKVALAFFIDYVMMGMENKQKFDHNLLGLVDDCETITSLKRALTPTINLGNPTKTVRYTLYRFPIVWAYETISSLTNRVVVRANETAIPRLSRWSCNPFYVLVASAKKVAYMQRVARAPKACVLSFDSINEVLVEERGNNHGDNREEDEVDEGGEDNVQKMYDDEEMHNDNVADEGVEDACHEDVFHEGPVHHHVRDETIPDVHGSIVLDRVMIEFATMRSQLGTMSSEFADVKHDLSAIMRYLRELSKGKYVDAPWFGGTWDGNDEGEGGGDDMTSDDEDDIEYHVEQQAD
BLAST of ClCG08G002200 vs. TrEMBL
Match: A0A0A0KM59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G141180 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 9.2e-29 Identity = 107/359 (29.81%), Postives = 167/359 (46.52%), Query Frame = 1
BLAST of ClCG08G002200 vs. TrEMBL
Match: Q5GIT0_CUCME (Ulp1 peptidase-like OS=Cucumis melo PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 1.3e-19 Identity = 64/173 (36.99%), Postives = 98/173 (56.65%), Query Frame = 1
BLAST of ClCG08G002200 vs. TrEMBL
Match: Q5GIS9_CUCME (Ulp1 peptidase-like OS=Cucumis melo PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 8.1e-17 Identity = 66/195 (33.85%), Postives = 101/195 (51.79%), Query Frame = 1
BLAST of ClCG08G002200 vs. TrEMBL
Match: M1DN28_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400041208 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 3.1e-08 Identity = 49/156 (31.41%), Postives = 81/156 (51.92%), Query Frame = 1
BLAST of ClCG08G002200 vs. TrEMBL
Match: A0A0A0L7D5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G379230 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.7e-06 Identity = 26/71 (36.62%), Postives = 44/71 (61.97%), Query Frame = 1
BLAST of ClCG08G002200 vs. NCBI nr
Match: gi|700194767|gb|KGN49944.1| (hypothetical protein Csa_5G141180 [Cucumis sativus]) HSP 1 Score: 136.3 bits (342), Expect = 1.3e-28 Identity = 107/359 (29.81%), Postives = 167/359 (46.52%), Query Frame = 1
BLAST of ClCG08G002200 vs. NCBI nr
Match: gi|778699090|ref|XP_011654656.1| (PREDICTED: uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus]) HSP 1 Score: 136.3 bits (342), Expect = 1.3e-28 Identity = 107/359 (29.81%), Postives = 167/359 (46.52%), Query Frame = 1
BLAST of ClCG08G002200 vs. NCBI nr
Match: gi|778699094|ref|XP_011654657.1| (PREDICTED: uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus]) HSP 1 Score: 136.3 bits (342), Expect = 1.3e-28 Identity = 107/359 (29.81%), Postives = 167/359 (46.52%), Query Frame = 1
BLAST of ClCG08G002200 vs. NCBI nr
Match: gi|659074247|ref|XP_008437501.1| (PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo]) HSP 1 Score: 135.6 bits (340), Expect = 2.3e-28 Identity = 110/367 (29.97%), Postives = 173/367 (47.14%), Query Frame = 1
BLAST of ClCG08G002200 vs. NCBI nr
Match: gi|659074245|ref|XP_008437500.1| (PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo]) HSP 1 Score: 135.6 bits (340), Expect = 2.3e-28 Identity = 110/367 (29.97%), Postives = 173/367 (47.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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