ClCG08G002190 (gene) Watermelon (Charleston Gray)

Overview
NameClCG08G002190
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionPrefoldin chaperone subunit family protein LENGTH=628
LocationCG_Chr08 : 4596262 .. 4601641 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACCGAGGAAGCTAGAAGCTCATCGGTAGAGCGAGTACAAGTTGAAGGACCAGTGACCCGGGGTAGGCGGCGAGATGATGCTCGTCTGTCCAGCTTAGAAGAAGGACTGGAAGATATGAAACTTGTCGTTGGTCGATTGAGTGAAAAATATGAAGAGCTCGTCCAAGAAAGCTCGGAGATCACGGCAGTTGCCAAAGAAATGATCATGGAGCTGGGACGGACGACGGGAGAAGAGGTAAGATCCCTCACTCAAGAAGTAGCAGACCTAAGGAAGTTCGTGGAAGGGGAACTCCACGATCTTCGTAAAGAGGTCGACGACATTCGAAAGGAATGTCGAGCAAGTCATGGTGCAAATGGTGAGGCGTCCACCAGCACCTCCGTCGCCGCAAGAGGCATTGAATGGCTTAAAGATACCAAAGCCTGATACTTATGACTACACAAGAAGTGCAATCATAGTGGATAACTTCTTGTTTGGCCTAGAGCAATATTTTGATGCTCTAAACGTCATCGAACGATGGAGCCAAAATAGCCAATGCGCCCAACTTCCTGCAAGAGGCAGCCTAGTTATGGTGGCGTAGGAAGTATGCTGAGTGCGAGTGGGACGGAAATTGCATCCAAACGTGGAGGCAATTTAAAACGGAATTGCGAAAGCATTTTGTGCCCCACAATGCCGATGCGGAAGCACGAGGAAAATTAAGGCGTTTAAGGCAGACCGGCAGTATTCCCGAGTACATTAAAGAATTTCAACCCTCATGCTGGAAATTGAAGGTTTATCTGACAAAGACGCACTCTTTTATTTCCGTGATGGTTTGAAGGATTGGGCGAAAATCGAGATCGATAGGCGCACACGCTGGACGATGCGATAGCTGCTGCGGAGATGCTCACTGATTTCGCGTCCAAGACCATGAAAGCCGCGAAGAAGGAAGAGGAAGTGTCGGAGTCGGATGAATCTGATGGGCATAAAACTGAGGACAGCAATAAGAATGGTTGATGGAACGGGAAGAAAAAGGAAAAAACTGTCGAGAAGAATGGAAGTAAATCTGCTAGACGCCCTTGCTTCATATGCGACGGACCACATTGGACTTGGGAATGCCCGAAGAAAAAGGCTCTCAACGCCTTGGTGGCCCGGTCCTGCGACGAAGAAAGTCAAGTTGAACCCCCCGCAAAGATGGGTTCCTTGCAACTTATTGGCGCCAACTCCTCCACCCCTTCAATCTCCTACTTCACTGCCAGCCTATTTAGTTCCCAGGCTTCCTGTAACCTCTTTATCTCTGATTCGATTGCCGATTGGGGGTCGTGTGGATGGAAGTACTAGTGGTTGGGGCTGTGACCTGTATGGACGAAAAAATAGATGAATCACAAACAATATAAAGTAATTACTAAAGTCAATACTAAACGTGTCACTGACCTCAGAAGTGATAGGATGGTCAGCTGATCTGGGATCCAGATCTTCTACATCAGACTGCTTACTCGATGAGGCAATGGAATCCTCGGTGTCATTGTCACTGATGTTTAATACTGATGGAAGATCGGAGGTAGTCTTCGACATTGATGTCTCTAACTAGGAGGTAGTCTCCACATCGCACCGAACAACAAGTGTAGTGCACTAGTCCTCCACTGGACCACTGCCATCTTCTTAGACACGTCTGGGGGGTCGCCTACCTTCAAATTGATAGAGGGTGCAAAAGAAACTTCCTCAGCCACTCAGTCTGCCTGCTGCTCGACATGGTATTCGATATCATCCTCATCATCAGATGTCATGTCGTCACCACCTCCCTCACCTTCGTCATTCCCATCCCAAGTTCCACCAAACCATGGTGCATCCACATATTTACCCTGCAGTATGCGAATAAATAACAGTTTAGAAAACTCTACTATAAGCCATACAACAAAGTAACTTAAATTTAATGGAAAATAAAATACCTTCGACAGCTCCCGCAAATATCGCATAATAGCAGAGAGGTCGTGCTTCACATCAGCAAACTCAGAACTCATCGTACCGAGTTGTGACCTCATGGTGGCAAATTCTATCATCACCCGATCTAAAACTACTCTAAACGGGTCTCTATCCATCTAAGCTCGTTGTTGAAATGGGGACTACTACCGTGGACGTCAGGTATGGTCTCGTCACGGACATGATGATGAACTGGGCCTTCGTGGAATACGTCCTCATGACAAGCATCCTCCACCCCCTCATCTGCCACGTTGTCATTGTGCATCTCCTAGACAACGTCCTCCTCACGAGCATCTTCCCTACCGTCATCCACCTCGTCATCATACATCTTCTGGACATTGTCCTCCCCACCCTCATCTACTTCATCCTCCTCACGATTGTCCCCATGATTGTTGCCTCTCTCTTCCACAAGGACCTCCTACTGACCTTCAGCAAGACATAGTAGCGGTCCCTGTATGCGAACGTTGATGGAGTCGAAAGACAGTACACATGCCTTAGGTGCCCGTGCTACCCGCTGCATATAGGCTACCTTCTTCGCACTAGCTACCAACACGTAGAATGGGTTACATGACTAAACTATGAAACAAGACATAATAAGAATTAAGATGTAACAATAAGACGGTTAGTTTCCTTTCATGATTTGAGTCGAAATCCTTACAGAGGATGTTGTATGATGGGGAGGTATTACACACCCACCTTGAGAGACGTGGTATCGCCGTCTCATTGGCACGAACGACAACCCGGTTCGTAAGGGACGAAATTGTTTCATACGCCCACACCTAAACAAAGAAAGAGAGTTAAATTTAATACATGATGAAGAAAGGAAAAAAATATTAATCTTAGAGAAACAAAATATTATCTAATTTGGAAGACTATAGGGAAGCGATATAGCGTGTATCGCACAGTCTTGGTGGGGTTTCCAAGGTTTATAGTAGGAGTAAGAGCTCTCTTTAGGCTGGTGATTGTCTTACTAAAAATCACCCCACTCTAGTCGTAATTACAGAATACCTCACAGTCATCTACTAGCCCTAGGAGATTATGGTCAAACTTTTGTTTATTCTCCATTCCCATCATAACGTAGTCAATGAAGAATGCAAGTGCGACCTTCACTGCATCCTCATCACTCCTAAACTGTATGGCTACGAACTCATTCTTTGCCTCCCACTGTTTTTTGTTGGTTTGGTTCTCGAAATATAGCCTCCTAAACCTACTCGGGTTTGCCGACCTCTGTATATTCCTTGTTCTAACCTTGAACCTAGTTACAAGGTCAAACTCATTCTTACTAAAGGACACTATATTCCTAAAAAGGTTGAAGGAAATTACGTCTGACCTCTCGTCTCTTACCTCCCTAGGAAGTAGGAGGTGTATCAACGGGCCATTAAGGACGAGGCTACAGTCTAGGATGGGTCCAAAAATGGTTTGCCTAAACATATCTAACTGGACCCTATATAACTTCCTTAAGTGCATCCCGAGTGTGAACTAAATGACTACATGATGTCAACTGTGCCTTGAAGTAGTCCTGAGGCAAGATCCTTGGCTCCATTAAATCCCTACATATAACACACAACAGGGCACTATGAACATGAGAATACATGCTAACATACACAAATAAAATAGACATTCTCAGGCAAAAGTGACAGAATACCCAAATCCCCAAAAGGTTTGAACCCACCAAGAAATTTGGGATTCTGTTACTTTACTAGCAAGAGCGAGATCAGCGAGAGCGAGAGCGAAACTAGAGAGAGCGAGAGCGAGATTAGTGACAGATCAAAGCGAGCGAGAGCAAGAACGAAACACTACTCATGAGATTTGGGCATTTCCTACACATATTCGATTTTCAAGCATGTCATACACATATTAAACCTCCTCTACTAGAAACCCTAAATTTCTTTTTCGTTTTTTACCACCAACTGCTCGAAAACATAAATTTCGGCATCGGTGTTTCAAAGAAGTTCTTGGGTTTATTTCTAGAAATTTTACCACAAATGACAAAAATTAGAGAGTACTTAAAAGAAATGGACTCTAGACGAAGTACCTTTGAAGATATTCAAGATACTTGTGTAGAATCCAACAAGGAATAGAGATTCGGCAAAAATCGAGAAGATTCAGCCGTTTTTTGCCGAAGACAGGTGTTGTTAGGGATTCAGAAGTAGGCGAGGATGGTCATATGTTTTAGGGAAGAAGACGATGGTCTAAGGGTTTAGGCAAGAAGACACTATTTCGAAGAAGAAGGGAACTTTCGAGAAATGTAAAAAAATGGGAGTCTTTCAGAAAACTCATTATAAAAGGGGGAAATTTGAAATTTGAACCGTTGGATGGTGAACCGGGTTTTGGGAAAGTAAACTAGAAATTGAACCGCTTATTGAGAAGGGAAAGTGTGTTGATAAGGTAAAGCGTGAGCAATACCAGCAACAACAAGACTAACGTGAGAGCAACGATGCCATAGAGATGAAACAATATCAGAGAGAGCGAGACTAACGAGACGATATTCATCGAAAAGCCAAAATACACGCCAACTTTCGGAAAATTTGGGCATTCTATGACTTTTCCCGTAAGATCTTGTTAGAAACCTTACGGGAAAAGTGACAGAATGTCCAAATTTCTCGAAAGTTAGCGTGTTTTGGGCATTCTGTCATTTTTCCCATCAACTCCAACTTACAAGAAACATGAACTTATGGGAAAAATGACAACGAGTAAAAAACGCATGTCGAATTCTTTTGCTTGGTGATTTCAGACATTCGTACACATATTAGACCTCTTTTACATGAAAATTTTGGATTTTCTTTTCCGTTTTTTACCGCCAACTATTCGAAAACCTAAATTTCCAGAAATTAGCATTTCAAAGAAGTTATTTGTGGGTTTATTTCCAAAAAATCGGGTCACTAGGATGGGTTTTACAACAAACGACAGAAATTAGAGAGCATCAAATAAAATGGACTCTTGTGAAGAAGATGGTCTCGGGGAAGATGTGGTTTGAGTGTTGAGGAACAAGATTTTTGGGGGTATTTACGCCATTTCACCATGTGGGACCCATCTCTGAAACTCTGAAAAGTTGAAAAATGGGTTAGAAAAAAAACTTTTTAAAAAGAGGTTAGTTTTGTCCCATAAAAAACTTTTTGGGTTAGAAATAGCAGTTTCTCAAAAGTGTTTAACTCTAAATTGAAGTCGATGAGAGAAATGAAAGTGGAAGAGATAGATTATGAAGTGTAGATACAATTTTCGTCCATATATTAATAGGAACAACATTTTCTTTTCTTTTTTAAAAAAAAAAATAAAGAAATTAAGGATACTAATATAACTTTTAAAAGTCTAGTGGTGTTTTATTTTTAATGAGGTATTAATGATATGTATTCTTATGCTAATGAGAATACTATTTTTTAACTTTTGTTTTTTAATTTAGGAATATTATTGTGACTTTTGA

mRNA sequence

ATGGCAACCGAGGAAGCTAGAAGCTCATCGGTAGAGCGAGTACAAGTTGAAGGACCAGTGACCCGGGGTAGGCGGCGAGATGATGCTCGTCTGTCCAGCTTAGAAGAAGGACTGGAAGATATGAAACTTGTCGTTGGTCGATTGAGTGAAAAATATGAAGAGCTCGTCCAAGAAAGCTCGGAGATCACGGCAGTTGCCAAAGAAATGATCATGGAGCTGGGACGGACGACGGGAGAAGAGGTAAGATCCCTCACTCAAGAAGTAGCAGACCTAAGGAAGTTCGTGGAAGGGGAACTCCACGATCTTCGTAAAGAGGTCGACGACATTCGAAAGGAATGTCGAGCAAGTCATGGTGCAAATGAAGTGATAGGATGGTCAGCTGATCTGGGATCCAGATCTTCTACATCAGACTGCTTACTCGATGAGGCAATGGAATCCTCGGTGTCATTGTCACTGATGTTTAATACTGATGGAAGATCGGAGGAATATTATTGTGACTTTTGA

Coding sequence (CDS)

ATGGCAACCGAGGAAGCTAGAAGCTCATCGGTAGAGCGAGTACAAGTTGAAGGACCAGTGACCCGGGGTAGGCGGCGAGATGATGCTCGTCTGTCCAGCTTAGAAGAAGGACTGGAAGATATGAAACTTGTCGTTGGTCGATTGAGTGAAAAATATGAAGAGCTCGTCCAAGAAAGCTCGGAGATCACGGCAGTTGCCAAAGAAATGATCATGGAGCTGGGACGGACGACGGGAGAAGAGGTAAGATCCCTCACTCAAGAAGTAGCAGACCTAAGGAAGTTCGTGGAAGGGGAACTCCACGATCTTCGTAAAGAGGTCGACGACATTCGAAAGGAATGTCGAGCAAGTCATGGTGCAAATGAAGTGATAGGATGGTCAGCTGATCTGGGATCCAGATCTTCTACATCAGACTGCTTACTCGATGAGGCAATGGAATCCTCGGTGTCATTGTCACTGATGTTTAATACTGATGGAAGATCGGAGGAATATTATTGTGACTTTTGA

Protein sequence

MATEEARSSSVERVQVEGPVTRGRRRDDARLSSLEEGLEDMKLVVGRLSEKYEELVQESSEITAVAKEMIMELGRTTGEEVRSLTQEVADLRKFVEGELHDLRKEVDDIRKECRASHGANEVIGWSADLGSRSSTSDCLLDEAMESSVSLSLMFNTDGRSEEYYCDF
Homology
[Close]
BLAST of ClCG08G002190 vs. TrEMBL
Match: A0A067JKJ0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26608 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.1e-11
Identity = 36/86 (41.86%), Postives = 57/86 (66.28%), Query Frame = 1 

Query: 28  DARLSSLEEGLEDMKLVVGRLSEKYEELVQESSEITAVAKEMIMELGRTTGEEVRSLTQE 87
           + R+ +LE+ +   +  VG LSE+ + +VQE+ EIT  AK+MI+ELG    +E+++L  E
Sbjct: 2   EQRVRALEQSMNSQEAFVGELSEQLDNVVQENEEITRAAKDMILELGVALRQELQALANE 61

Query: 88  VADLRKFVEGELHDLRKEVDDIRKEC 114
           V ++R  +  E+  LRKEVD +R EC
Sbjct: 62  VTEVRGIINSEVSALRKEVDALRSEC 87

[Close]
BLAST of ClCG08G002190 vs. TrEMBL
Match: A0A067JGL2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01166 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 8.8e-06
Identity = 28/66 (42.42%), Postives = 43/66 (65.15%), Query Frame = 1 

Query: 28 DARLSSLEEGLEDMKLVVGRLSEKYEELVQESSEITAVAKEMIMELGRTTGEEVRSLTQE 87
          + R+ +LE  L   +   G LSE+ + +VQ++ E+T VAK+MI ELGR   EE+R+L  E
Sbjct: 27 EQRVKALERSLSTQEAFAGELSEQLDNVVQKNEEVTRVAKDMITELGRALREELRALANE 86

Query: 88 VADLRK 94
          V  +R+
Sbjct: 87 VIQVRE 92

[Close]
BLAST of ClCG08G002190 vs. NCBI nr
Match: gi|659083321|ref|XP_008442289.1| (PREDICTED: uncharacterized protein LOC103486198 [Cucumis melo])

HSP 1 Score: 113.6 bits (283), Expect = 3.3e-22
Identity = 66/146 (45.21%), Postives = 93/146 (63.70%), Query Frame = 1 

Query: 1   MATEEARSSSVERVQVEGPVTRGRRRD------------------DARLSSLEEGLEDMK 60
           M+ EE  +S VE+V +EGPVTRGR+                    + RL++LE+G+ED++
Sbjct: 1   MSAEEGHTSPVEQV-IEGPVTRGRKEQHSSTRRSKSKGPAVREHVNTRLTNLEQGMEDVQ 60

Query: 61  LVVGRLSEKYEELVQESSEITAVAKEMIMELGRTTGEEVRSLTQEVADLRKFVEGELHD- 120
           L VGRLS+ +EELVQE++EIT+VAKEMI ++GRT  +E++ L   V  L+ FVEGELHD 
Sbjct: 61  LAVGRLSDNFEELVQENAEITSVAKEMIEDMGRTFQKELKELASTVTTLKAFVEGELHDL 120

[Close]
BLAST of ClCG08G002190 vs. NCBI nr
Match: gi|659068885|ref|XP_008446938.1| (PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo])

HSP 1 Score: 112.5 bits (280), Expect = 7.3e-22
Identity = 66/146 (45.21%), Postives = 93/146 (63.70%), Query Frame = 1 

Query: 1   MATEEARSSSVERVQVEGPVTRGRRRD------------------DARLSSLEEGLEDMK 60
           M+ EE  +S VE+V +EGPVTRGR+                    D RL++LE+G+ED++
Sbjct: 1   MSAEEGHTSPVEQV-IEGPVTRGRKEQHSPTRRSKSKGPAVREHVDTRLTNLEQGMEDVQ 60

Query: 61  LVVGRLSEKYEELVQESSEITAVAKEMIMELGRTTGEEVRSLTQEVADLRKFVEGELHDL 120
           L VGRLSE +EELV E++EIT+VAKEMI ++GRT  +E++ L   V  L+ FVEGELH+L
Sbjct: 61  LAVGRLSENFEELVLENAEITSVAKEMIEDMGRTFQKELKELASTVTTLKAFVEGELHNL 120

[Close]
BLAST of ClCG08G002190 vs. NCBI nr
Match: gi|659121350|ref|XP_008460615.1| (PREDICTED: uncharacterized protein LOC103499392 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 1.9e-14
Identity = 47/91 (51.65%), Postives = 65/91 (71.43%), Query Frame = 1 

Query: 38  LEDMKLVVGRLSEKYEELVQESSEITAVAKEMIMELGRTTGEEVRSLTQEVADLRKFVEG 97
           +ED++L VGRLSE +EELVQE++EIT+VAKEMI ++GRT  EE++ L   V  L+ FVEG
Sbjct: 1   MEDVQLAVGRLSENFEELVQENAEITSVAKEMIEDMGRTFQEELKELASTVTTLKAFVEG 60

Query: 98  ELHDLRKE-------VDDIRKECRASH-GAN 121
           ELH+L  +       +D +  ECR+ H G+N
Sbjct: 61  ELHNLHTKSISFETRLDALCVECRSKHLGSN 91

[Close]
BLAST of ClCG08G002190 vs. NCBI nr
Match: gi|643710121|gb|KDP24402.1| (hypothetical protein JCGZ_26608 [Jatropha curcas])

HSP 1 Score: 76.6 bits (187), Expect = 4.5e-11
Identity = 36/86 (41.86%), Postives = 57/86 (66.28%), Query Frame = 1 

Query: 28  DARLSSLEEGLEDMKLVVGRLSEKYEELVQESSEITAVAKEMIMELGRTTGEEVRSLTQE 87
           + R+ +LE+ +   +  VG LSE+ + +VQE+ EIT  AK+MI+ELG    +E+++L  E
Sbjct: 2   EQRVRALEQSMNSQEAFVGELSEQLDNVVQENEEITRAAKDMILELGVALRQELQALANE 61

Query: 88  VADLRKFVEGELHDLRKEVDDIRKEC 114
           V ++R  +  E+  LRKEVD +R EC
Sbjct: 62  VTEVRGIINSEVSALRKEVDALRSEC 87

The following BLAST results are available for this feature:
BLAST of ClCG08G002190 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A067JKJ0_JATCU3.1e-1141.86Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26608 PE=4 SV=1[more]
A0A067JGL2_JATCU8.8e-0642.42Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01166 PE=4 SV=1[more]
BLAST of ClCG08G002190 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659083321|ref|XP_008442289.1|3.3e-2245.21PREDICTED: uncharacterized protein LOC103486198 [Cucumis melo][more]
gi|659068885|ref|XP_008446938.1|7.3e-2245.21PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo][more]
gi|659121350|ref|XP_008460615.1|1.9e-1451.65PREDICTED: uncharacterized protein LOC103499392 [Cucumis melo][more]
gi|643710121|gb|KDP24402.1|4.5e-1141.86hypothetical protein JCGZ_26608 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G002190.1ClCG08G002190.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 38..58
score: -coord: 92..112
scor

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG08G002190Cucurbita moschata (Rifu)cmowcgB429
ClCG08G002190Wild cucumber (PI 183967)cpiwcgB526
ClCG08G002190Cucumber (Chinese Long) v2cuwcgB500
ClCG08G002190Melon (DHL92) v3.5.1mewcgB297
ClCG08G002190Cucurbita pepo (Zucchini)cpewcgB532
ClCG08G002190Bottle gourd (USVL1VR-Ls)lsiwcgB440
ClCG08G002190Cucumber (Gy14) v2cgybwcgB457
ClCG08G002190Melon (DHL92) v3.6.1medwcgB297
ClCG08G002190Cucumber (Chinese Long) v3cucwcgB518
ClCG08G002190Watermelon (97103) v2wcgwmbB336
ClCG08G002190Wax gourdwcgwgoB633
ClCG08G002190Cucumber (Gy14) v1cgywcgB563
ClCG08G002190Cucurbita maxima (Rimu)cmawcgB039
ClCG08G002190Cucurbita maxima (Rimu)cmawcgB430