ClCG08G001540 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG08G001540
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	RNA-directed DNA polymerase , putative
Location	CG_Chr08 : 2994508 .. 2995852 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGGACTAATTTGAAAGCTAGCCTAGCAGATAGTCTGGAGGAGCCTTCTTCGTTGAATGCAGATCAGAGGATGGAAAGGGCTAATTTAAAAGCAAGCCTAGCTGATTTGGTAAAGAAAGAGCAGCAAATGAAGATTCACAAACTGAAAATCTAGTGGCAAGAAAGGGATGCCAATCTAGTTTCTTCCACAGATGGGCTTTTCCTTAGGTTAGTAAAAATCCTATCAGTACCTTAATGAGTGCAGAGATGGGCGTTGGTTATCCAAAATGGATGAGATTGAGGAAAAAGTAGATGGTTTCTTAATATTTTTCTCCCAACTGTACAAAGCAGATGAAGGTCAGCGCTTTATTTTAGAAGGGGCTGATTGGAAGCGTATTTTGCCGGAAGTTGTATCTAGTTGGAGAGACCTTTTGAAGAATCGGAGGTTCGTCAATCCGAGGAACATAAAAATCACCGGATCTTGATGATTTCAGTGGAGAATTTTTTAAAATTATTGGAACATCATTGAAGGTGATCTCAAGGTGTTCCAAGGACCAAGAGTTTTTCAACAATGACATTTTATATCGAAGGACAAAGGAGACATATATGGCTTTAAGCACTAAGAAGAAAGGAAATTTCAAAAGTAGTGACTTCAGACCGTTTAGCTAGGTTACTTCTCTGTACAAAATAATTGCTAAAGTTTTGGCTGAAAGGCTTAAGAAAGTTTTTCCTTTTACTACTAATGACACTCAAATGGTGTTTGTGAGGGTCGTCAAATCCTTTATGCCATTTTGCTTGCTGCTAAATCAGTTGAAGACTATTGGACAAAGAAGAAATCAGGGCCTGTGAAACAAATTGATTTTGAGAAAGCCTATGACAAGTTTGATTGGGGCTTCCTCGATCATATTCTGGAGCTCAAAAGTTTTGGGAGCAGATGGAGGTTGTGGATTAAAGGCTGTTAATCCAATTCCTACTTCTCCCATATTGGTTAATGGCTGCCCCAGGGGCAAAATTTGGGCTTTAAGAGGGATTGGACAGGGTACTTCTCTTTCCCATTTCCTTTTTCCGATAGTTGCTGATTCTTTTAGTCACTTTGTAAACATTTGGAGGAACAAAGATTTGATAGAAGGCTTCATAGTTGGACAGGATAGTATCCACATTTCCCATGTCCAATATGCTGATGATACTCTGTTTCTTTTTTTTTTTTTGCAAAGGAGAGAAATGTTTTTGCAGAAAATTGGCTGCTGTTGCTTCACCTTTTCGAGAAGGCTTCTGACCTATCAATTAATATGCAAAAGTCTACCGTGGTTGGGGTCCATATGGAAGACGCTCTAGTGGAGGAAGTGGCTAGAATATATTAG

mRNA sequence

ATGGAAAGGACTAATTTGAAAGCTAGCCTAGCAGATAGTCTGGAGGAGCCTTCTTCGTTGAATGCAGATCAGAGGATGGAAAGGGCTAATTTAAAAGCAAGCCTAGCTGATTTGTGGCAAGAAAGGGATGCCAATCTAGTTTCTTCCACAGATGGGCTTTTCCTTAGAGATGGGCGTTGGTTATCCAAAATGGATGAGATTGAGGAAAAAGTAGATGGTTTCTTAATATTTTTCTCCCAACTGTACAAAGCAGATGAAGGTCAGCGCTTTATTTTAGAAGGGGCTGATTGGAAGCGTATTTTGCCGGAAGTTGTATCTAGTTGGAGAGACCTTTTGAAGAATCGGAGGTGTTCCAAGGACCAAGAGTTTTTCAACAATGACATTTTATATCGAAGGACAAAGGAGACATATATGGCTTTAAGCACTAAGAAGAAAGGAAATTTCAAAAGTAGTGACTTCAGACCGCTTAAGAAAGTTTTTCCTTTTACTACTAATGACACTCAAATGGTGTTTGTGAGGGTCGTCAAATCCTTTATGCCATTTTGCTTGCTGCTAAATCAGTTGAAGACTATTGGACAAAGAAGAAATCAGGGCCTTTTGATTGGGGCTTCCTCGATCATATTCTGGAGCTCAAAAGTTTTGGGAGCAGATGGAGGTTGTGGATTAAAGGCTGTTAATCCAATTCCTACTTCTCCCATATTGGTTAATGGCTGCCCCAGGGGCAAAATTTGGGCTTTAAGAGGGATTGGACAGGGTACTTCTCTTTCCCATTTCCTTTTTCCGATAGTTGCTGATTCTTTTAGTCACTTTGTAAACATTTGGAGGAACAAAGATTTGATAGAAGGCTTCATAGTTGGACAGGATAAAAATTGGCTGCTGTTGCTTCACCTTTTCGAGAAGGCTTCTGACCTATCAATTAATATGCAAAAGTCTACCGTGGTTGGGGTCCATATGGAAGACGCTCTAGTGGAGGAAGTGGCTAGAATATATTAG

Coding sequence (CDS)

ATGGAAAGGACTAATTTGAAAGCTAGCCTAGCAGATAGTCTGGAGGAGCCTTCTTCGTTGAATGCAGATCAGAGGATGGAAAGGGCTAATTTAAAAGCAAGCCTAGCTGATTTGTGGCAAGAAAGGGATGCCAATCTAGTTTCTTCCACAGATGGGCTTTTCCTTAGAGATGGGCGTTGGTTATCCAAAATGGATGAGATTGAGGAAAAAGTAGATGGTTTCTTAATATTTTTCTCCCAACTGTACAAAGCAGATGAAGGTCAGCGCTTTATTTTAGAAGGGGCTGATTGGAAGCGTATTTTGCCGGAAGTTGTATCTAGTTGGAGAGACCTTTTGAAGAATCGGAGGTGTTCCAAGGACCAAGAGTTTTTCAACAATGACATTTTATATCGAAGGACAAAGGAGACATATATGGCTTTAAGCACTAAGAAGAAAGGAAATTTCAAAAGTAGTGACTTCAGACCGCTTAAGAAAGTTTTTCCTTTTACTACTAATGACACTCAAATGGTGTTTGTGAGGGTCGTCAAATCCTTTATGCCATTTTGCTTGCTGCTAAATCAGTTGAAGACTATTGGACAAAGAAGAAATCAGGGCCTTTTGATTGGGGCTTCCTCGATCATATTCTGGAGCTCAAAAGTTTTGGGAGCAGATGGAGGTTGTGGATTAAAGGCTGTTAATCCAATTCCTACTTCTCCCATATTGGTTAATGGCTGCCCCAGGGGCAAAATTTGGGCTTTAAGAGGGATTGGACAGGGTACTTCTCTTTCCCATTTCCTTTTTCCGATAGTTGCTGATTCTTTTAGTCACTTTGTAAACATTTGGAGGAACAAAGATTTGATAGAAGGCTTCATAGTTGGACAGGATAAAAATTGGCTGCTGTTGCTTCACCTTTTCGAGAAGGCTTCTGACCTATCAATTAATATGCAAAAGTCTACCGTGGTTGGGGTCCATATGGAAGACGCTCTAGTGGAGGAAGTGGCTAGAATATATTAG

Protein sequence

MERTNLKASLADSLEEPSSLNADQRMERANLKASLADLWQERDANLVSSTDGLFLRDGRWLSKMDEIEEKVDGFLIFFSQLYKADEGQRFILEGADWKRILPEVVSSWRDLLKNRRCSKDQEFFNNDILYRRTKETYMALSTKKKGNFKSSDFRPLKKVFPFTTNDTQMVFVRVVKSFMPFCLLLNQLKTIGQRRNQGLLIGASSIIFWSSKVLGADGGCGLKAVNPIPTSPILVNGCPRGKIWALRGIGQGTSLSHFLFPIVADSFSHFVNIWRNKDLIEGFIVGQDKNWLLLLHLFEKASDLSINMQKSTVVGVHMEDALVEEVARIY

Homology

[Close]

BLAST of ClCG08G001540 vs. TrEMBL
Match: M5W647_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019748mg PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.0e-14
Identity = 86/338 (25.44%), Postives = 140/338 (41.42%), Query Frame = 1


Query: 51  DGLFLRDGRWLSKMDEIEEKVDGFLIFFSQLYKADEGQRFILEGADWKRILPEVVSSWRD 110
           DG+ + +G       EIE ++   + FF  LY ++    + LEG +W  I  E       
Sbjct: 373 DGVVVSEG-------EIELEI---INFFKNLYSSNAEAGWCLEGLNWNAISVEEAEWLER 432

Query: 111 LLKNRRCSKDQ------EFFNNDILYRRTKETYMALSTKKKGNFKSSDFRP--------- 170
             +     +        +FFN  I+   T ET++ L  KKK + K SDFRP         
Sbjct: 433 PFEEEEVKRADLMKVMVDFFNCGIINAITNETFICLIPKKKESIKVSDFRPISLVTSLYK 492

Query: 171 ---------LKKVFPFTTNDTQMVFVRVVKSFMPFCLLLNQLKTIGQRRNQGLLI----- 230
                    L++V   T +  Q  FV+  +  +   L+ N++    +R N+  ++     
Sbjct: 493 MVSKVLASRLREVLGSTISSYQSAFVQ-GRQILDAALIANEVVEESRRLNKSGMVFKIDL 552

Query: 231 -GASSIIFWS-------SKVLGADGGCGLKAVNPIPTSPILVNGCPRGKIWALRGIGQGT 290
             A   + W         K  G      ++         +++NG PRGK  A RG+ QG 
Sbjct: 553 EKAYDHVEWRFVDEVLIRKGFGDRWRSWIRGSLETANFSVMINGRPRGKFRASRGLRQGD 612

Query: 291 SLSHFLFPIVADSFSHFVNIWRNKDLIEG---------------------FIVGQDKNW- 328
            LS FLF +V D  S  +   ++ D+  G                     FI  +D+ W 
Sbjct: 613 PLSPFLFTLVMDVLSRIMEKAQDADMFHGLSPGLGMVEVSHLQFADDTIFFIEDKDEYWN 672

[Close]

BLAST of ClCG08G001540 vs. TrEMBL
Match: M5XUF8_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015473mg PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.6e-11
Identity = 70/261 (26.82%), Postives = 112/261 (42.91%), Query Frame = 1


Query: 122 EFFNNDILYRRTKETYMALSTKKKGNFKSSDFRP------------------LKKVFPFT 181
           +FFN  I+   T ET++ L  KKK + K SDFRP                  L++V   T
Sbjct: 734 DFFNCGIINAITNETFICLIPKKKESIKVSDFRPISLVTSLYKMVSKVLASRLREVLGST 793

Query: 182 TNDTQMVFVRVVKSFMPFCLLLNQLKTIGQRRNQGLLI------GASSIIFWS------- 241
            +  Q  FV+  +  +   L+ N++    +R N+  ++       A   + W        
Sbjct: 794 ISSYQSAFVQ-GRQILDAALIANEVVEESRRLNKSGMVFKIDLEKAYDHVEWRFVDEVLI 853

Query: 242 SKVLGADGGCGLKAVNPIPTSPILVNGCPRGKIWALRGIGQGTSLSHFLFPIVADSFSHF 301
            K  G      ++         +++NG PRGKI A RG+ QG  LS FLF +V D  S  
Sbjct: 854 RKGFGDRWRSWIRGCLETANFSVMINGRPRGKIRASRGLRQGDPLSPFLFTLVMDVLSRI 913

Query: 302 VNIWRNKDLIEG---------------------FIVGQDKNW---LLLLHLFEKASDLSI 328
           +   ++ D   G                     FI  +++ W   L +L LF   S + I
Sbjct: 914 MEKAQDTDQFHGLSPGHGMVEVSHLQFADDTIFFIEDKEEYWNNLLQILELFCFVSGMKI 973

[Close]

BLAST of ClCG08G001540 vs. TrEMBL
Match: M5WKV4_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015607mg PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 8.0e-11
Identity = 76/278 (27.34%), Postives = 126/278 (45.32%), Query Frame = 1


Query: 106 SSWRDLLKNRRCSKDQEFFNNDILYRRTKETYMALSTKKKGNFKSSDFRP---------- 165
           S W +++K       Q+FF + I+   T ET++ L  KK  + K +D+RP          
Sbjct: 208 SCW-EVVKGDLMKVMQDFFQSGIVNGVTNETFICLIPKKANSVKVTDYRPISLVTSLYKV 267

Query: 166 --------LKKVFPFTTNDTQMVFVRVVKSFMPFCLLLNQL-KTIGQRRNQGLLIG---- 225
                   L++V   T + +Q  FV+  +  +   L+ N++ + + +++ +GL+      
Sbjct: 268 ISKVLASRLREVLGNTISQSQGAFVQK-RQILDAVLVANEVVEEVRKQKRKGLVFKIDFE 327

Query: 226 -ASSIIFWS--SKVLGADG----------GCGLKAVNPIPTSPILVNGCPRGKIWALRGI 285
            A   + W+    VL   G          GC L++VN      I++NG PRGK  A RG+
Sbjct: 328 KAYDHVEWNFVDDVLARKGFGAKWRGWIIGC-LESVN----FSIMINGKPRGKFRASRGL 387

Query: 286 GQGTSLSHFLFPIVADSFSHFVNIWRNKDLIEGFIVGQDK-------------------- 323
            QG  LS FLF +V+D  S  +   ++ +L+ G + G D+                    
Sbjct: 388 RQGDPLSPFLFTLVSDVLSRIIERAQDVNLVHGIVSGHDQVEVSHLQFADDTIFLLDGKE 447

[Close]

BLAST of ClCG08G001540 vs. TrEMBL
Match: A5BQI4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030910 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10
Identity = 74/281 (26.33%), Postives = 118/281 (41.99%), Query Frame = 1


Query: 110 DLLKNRRCSKDQEFFNNDILYRRTKETYMALSTKKKGNFKSSDFRP-------------- 169
           D++K        EF  N ++ + T  T++AL  KK  + K SD+RP              
Sbjct: 126 DVIKEDLMRVFLEFHTNGVINQSTNATFIALVPKKSQSVKISDYRPISLVTSLYKIIAKV 185

Query: 170 ----LKKVFPFTTNDTQMVFVRVVKSFMPFCLLLNQLKTIGQRRNQGLLI------GASS 229
               L+KV   T +D+Q  FV   +  +   L+ N++    +R  +  ++       A  
Sbjct: 186 LSGRLRKVLHETISDSQGAFVEG-RHILDAVLIANEVVDEKRRSGEEGIVFKIDFEKAYD 245

Query: 230 IIFWS--SKVLGADG----------GCGLKAVNPIPTSPILVNGCPRGKIWALRGIGQGT 289
            + W     VL   G          GC   +     +  ILVNG  +G + A RG+ QG 
Sbjct: 246 HVDWGFLDHVLQRKGFSQKWRLWIRGCLYSS-----SFAILVNGNAKGWVKASRGLRQGD 305

Query: 290 SLSHFLFPIVADSFSHFVNIWRNKDLIEGFIVGQDK------------------------ 331
            LS FLF +VAD  S  +       L EGF VG+D+                        
Sbjct: 306 PLSPFLFTLVADVLSRMLFRAEETGLTEGFSVGRDRTRVSLLQFADDTIFFSKASMEHLQ 365

[Close]

BLAST of ClCG08G001540 vs. TrEMBL
Match: A5ADL9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017151 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.6e-09
Identity = 72/258 (27.91%), Postives = 114/258 (44.19%), Query Frame = 1


Query: 110 DLLKNRRCSKDQEFFNNDILYRRTKETYMALSTKKKGNFKSSDFRP-------------- 169
           D++K        EF  + ++ + T  +++ L  KK    K SDFRP              
Sbjct: 267 DVIKKDLVRVFAEFHRSGVINQSTNASFIVLLPKKSTTKKISDFRPISLITSLYKIIAKV 326

Query: 170 ----LKKVFPFTTNDTQMVFVRVVKSFMPFCLLLNQLKTIGQRRNQGLLIGASSIIF--- 229
               L+ V   T + TQ  FV+  +  M   L+ N++  + +RR  G       I F   
Sbjct: 327 LSGRLRGVLHETIHSTQGAFVQG-RQIMDAVLIANEI--VDERRRSGEEGVVFKIDFEKA 386

Query: 230 -----WS--SKVLGADG----------GCGLKAVNPIPTSPILVNGCPRGKIWALRGIGQ 289
                W    +VL   G          GC L +V+      +LVNG  +G + A RG+ Q
Sbjct: 387 YDHVRWDFLDQVLEKKGFSPKWRKWMNGC-LSSVS----YAVLVNGSAKGWVKASRGLRQ 446

Query: 290 GTSLSHFLFPIVADSFSHFVNIWRNKDLIEGFIVGQDKNWLL--LLHLFEKASDLSINMQ 328
           G  LS FLF +VAD  S  +     ++++EGF  G++    L  LL  F   S L +N+ 
Sbjct: 447 GDPLSPFLFTLVADVLSRMLLRAEERNMLEGFQGGEEDLQTLKSLLLAFGHISGLKVNLD 506

[Close]

BLAST of ClCG08G001540 vs. NCBI nr
Match: gi|595838254|ref|XP_007207617.1| (hypothetical protein PRUPE_ppa019748mg, partial [Prunus persica])

HSP 1 Score: 88.2 bits (217), Expect = 2.9e-14
Identity = 86/338 (25.44%), Postives = 140/338 (41.42%), Query Frame = 1


Query: 51  DGLFLRDGRWLSKMDEIEEKVDGFLIFFSQLYKADEGQRFILEGADWKRILPEVVSSWRD 110
           DG+ + +G       EIE ++   + FF  LY ++    + LEG +W  I  E       
Sbjct: 373 DGVVVSEG-------EIELEI---INFFKNLYSSNAEAGWCLEGLNWNAISVEEAEWLER 432

Query: 111 LLKNRRCSKDQ------EFFNNDILYRRTKETYMALSTKKKGNFKSSDFRP--------- 170
             +     +        +FFN  I+   T ET++ L  KKK + K SDFRP         
Sbjct: 433 PFEEEEVKRADLMKVMVDFFNCGIINAITNETFICLIPKKKESIKVSDFRPISLVTSLYK 492

Query: 171 ---------LKKVFPFTTNDTQMVFVRVVKSFMPFCLLLNQLKTIGQRRNQGLLI----- 230
                    L++V   T +  Q  FV+  +  +   L+ N++    +R N+  ++     
Sbjct: 493 MVSKVLASRLREVLGSTISSYQSAFVQ-GRQILDAALIANEVVEESRRLNKSGMVFKIDL 552

Query: 231 -GASSIIFWS-------SKVLGADGGCGLKAVNPIPTSPILVNGCPRGKIWALRGIGQGT 290
             A   + W         K  G      ++         +++NG PRGK  A RG+ QG 
Sbjct: 553 EKAYDHVEWRFVDEVLIRKGFGDRWRSWIRGSLETANFSVMINGRPRGKFRASRGLRQGD 612

Query: 291 SLSHFLFPIVADSFSHFVNIWRNKDLIEG---------------------FIVGQDKNW- 328
            LS FLF +V D  S  +   ++ D+  G                     FI  +D+ W 
Sbjct: 613 PLSPFLFTLVMDVLSRIMEKAQDADMFHGLSPGLGMVEVSHLQFADDTIFFIEDKDEYWN 672

[Close]

BLAST of ClCG08G001540 vs. NCBI nr
Match: gi|596221970|ref|XP_007224079.1| (hypothetical protein PRUPE_ppa015473mg, partial [Prunus persica])

HSP 1 Score: 78.6 bits (192), Expect = 2.3e-11
Identity = 70/261 (26.82%), Postives = 112/261 (42.91%), Query Frame = 1


Query: 122 EFFNNDILYRRTKETYMALSTKKKGNFKSSDFRP------------------LKKVFPFT 181
           +FFN  I+   T ET++ L  KKK + K SDFRP                  L++V   T
Sbjct: 734 DFFNCGIINAITNETFICLIPKKKESIKVSDFRPISLVTSLYKMVSKVLASRLREVLGST 793

Query: 182 TNDTQMVFVRVVKSFMPFCLLLNQLKTIGQRRNQGLLI------GASSIIFWS------- 241
            +  Q  FV+  +  +   L+ N++    +R N+  ++       A   + W        
Sbjct: 794 ISSYQSAFVQ-GRQILDAALIANEVVEESRRLNKSGMVFKIDLEKAYDHVEWRFVDEVLI 853

Query: 242 SKVLGADGGCGLKAVNPIPTSPILVNGCPRGKIWALRGIGQGTSLSHFLFPIVADSFSHF 301
            K  G      ++         +++NG PRGKI A RG+ QG  LS FLF +V D  S  
Sbjct: 854 RKGFGDRWRSWIRGCLETANFSVMINGRPRGKIRASRGLRQGDPLSPFLFTLVMDVLSRI 913

Query: 302 VNIWRNKDLIEG---------------------FIVGQDKNW---LLLLHLFEKASDLSI 328
           +   ++ D   G                     FI  +++ W   L +L LF   S + I
Sbjct: 914 MEKAQDTDQFHGLSPGHGMVEVSHLQFADDTIFFIEDKEEYWNNLLQILELFCFVSGMKI 973

[Close]

BLAST of ClCG08G001540 vs. NCBI nr
Match: gi|595831294|ref|XP_007206246.1| (hypothetical protein PRUPE_ppa015607mg, partial [Prunus persica])

HSP 1 Score: 76.3 bits (186), Expect = 1.2e-10
Identity = 76/278 (27.34%), Postives = 126/278 (45.32%), Query Frame = 1


Query: 106 SSWRDLLKNRRCSKDQEFFNNDILYRRTKETYMALSTKKKGNFKSSDFRP---------- 165
           S W +++K       Q+FF + I+   T ET++ L  KK  + K +D+RP          
Sbjct: 208 SCW-EVVKGDLMKVMQDFFQSGIVNGVTNETFICLIPKKANSVKVTDYRPISLVTSLYKV 267

Query: 166 --------LKKVFPFTTNDTQMVFVRVVKSFMPFCLLLNQL-KTIGQRRNQGLLIG---- 225
                   L++V   T + +Q  FV+  +  +   L+ N++ + + +++ +GL+      
Sbjct: 268 ISKVLASRLREVLGNTISQSQGAFVQK-RQILDAVLVANEVVEEVRKQKRKGLVFKIDFE 327

Query: 226 -ASSIIFWS--SKVLGADG----------GCGLKAVNPIPTSPILVNGCPRGKIWALRGI 285
            A   + W+    VL   G          GC L++VN      I++NG PRGK  A RG+
Sbjct: 328 KAYDHVEWNFVDDVLARKGFGAKWRGWIIGC-LESVN----FSIMINGKPRGKFRASRGL 387

Query: 286 GQGTSLSHFLFPIVADSFSHFVNIWRNKDLIEGFIVGQDK-------------------- 323
            QG  LS FLF +V+D  S  +   ++ +L+ G + G D+                    
Sbjct: 388 RQGDPLSPFLFTLVSDVLSRIIERAQDVNLVHGIVSGHDQVEVSHLQFADDTIFLLDGKE 447

[Close]

BLAST of ClCG08G001540 vs. NCBI nr
Match: gi|147821641|emb|CAN70431.1| (hypothetical protein VITISV_030910 [Vitis vinifera])

HSP 1 Score: 75.5 bits (184), Expect = 2.0e-10
Identity = 74/281 (26.33%), Postives = 118/281 (41.99%), Query Frame = 1


Query: 110 DLLKNRRCSKDQEFFNNDILYRRTKETYMALSTKKKGNFKSSDFRP-------------- 169
           D++K        EF  N ++ + T  T++AL  KK  + K SD+RP              
Sbjct: 126 DVIKEDLMRVFLEFHTNGVINQSTNATFIALVPKKSQSVKISDYRPISLVTSLYKIIAKV 185

Query: 170 ----LKKVFPFTTNDTQMVFVRVVKSFMPFCLLLNQLKTIGQRRNQGLLI------GASS 229
               L+KV   T +D+Q  FV   +  +   L+ N++    +R  +  ++       A  
Sbjct: 186 LSGRLRKVLHETISDSQGAFVEG-RHILDAVLIANEVVDEKRRSGEEGIVFKIDFEKAYD 245

Query: 230 IIFWS--SKVLGADG----------GCGLKAVNPIPTSPILVNGCPRGKIWALRGIGQGT 289
            + W     VL   G          GC   +     +  ILVNG  +G + A RG+ QG 
Sbjct: 246 HVDWGFLDHVLQRKGFSQKWRLWIRGCLYSS-----SFAILVNGNAKGWVKASRGLRQGD 305

Query: 290 SLSHFLFPIVADSFSHFVNIWRNKDLIEGFIVGQDK------------------------ 331
            LS FLF +VAD  S  +       L EGF VG+D+                        
Sbjct: 306 PLSPFLFTLVADVLSRMLFRAEETGLTEGFSVGRDRTRVSLLQFADDTIFFSKASMEHLQ 365

[Close]

BLAST of ClCG08G001540 vs. NCBI nr
Match: gi|147867182|emb|CAN79956.1| (hypothetical protein VITISV_017151 [Vitis vinifera])

HSP 1 Score: 71.2 bits (173), Expect = 3.7e-09
Identity = 72/258 (27.91%), Postives = 114/258 (44.19%), Query Frame = 1


Query: 110 DLLKNRRCSKDQEFFNNDILYRRTKETYMALSTKKKGNFKSSDFRP-------------- 169
           D++K        EF  + ++ + T  +++ L  KK    K SDFRP              
Sbjct: 267 DVIKKDLVRVFAEFHRSGVINQSTNASFIVLLPKKSTTKKISDFRPISLITSLYKIIAKV 326

Query: 170 ----LKKVFPFTTNDTQMVFVRVVKSFMPFCLLLNQLKTIGQRRNQGLLIGASSIIF--- 229
               L+ V   T + TQ  FV+  +  M   L+ N++  + +RR  G       I F   
Sbjct: 327 LSGRLRGVLHETIHSTQGAFVQG-RQIMDAVLIANEI--VDERRRSGEEGVVFKIDFEKA 386

Query: 230 -----WS--SKVLGADG----------GCGLKAVNPIPTSPILVNGCPRGKIWALRGIGQ 289
                W    +VL   G          GC L +V+      +LVNG  +G + A RG+ Q
Sbjct: 387 YDHVRWDFLDQVLEKKGFSPKWRKWMNGC-LSSVS----YAVLVNGSAKGWVKASRGLRQ 446

Query: 290 GTSLSHFLFPIVADSFSHFVNIWRNKDLIEGFIVGQDKNWLL--LLHLFEKASDLSINMQ 328
           G  LS FLF +VAD  S  +     ++++EGF  G++    L  LL  F   S L +N+ 
Sbjct: 447 GDPLSPFLFTLVADVLSRMLLRAEERNMLEGFQGGEEDLQTLKSLLLAFGHISGLKVNLD 506

The following BLAST results are available for this feature:

BLAST of ClCG08G001540 vs. TrEMBL


Match Name	E-value	Identity	Description
M5W647_PRUPE	2.0e-14	25.44	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019748mg PE=4 S...	[more]
M5XUF8_PRUPE	1.6e-11	26.82	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015473mg PE=4 S...	[more]
M5WKV4_PRUPE	8.0e-11	27.34	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015607mg PE=4 S...	[more]
A5BQI4_VITVI	1.4e-10	26.33	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030910 PE=4 SV=1	[more]
A5ADL9_VITVI	2.6e-09	27.91	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017151 PE=4 SV=1	[more]

BLAST of ClCG08G001540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|595838254\|ref\|XP_007207617.1\|	2.9e-14	25.44	hypothetical protein PRUPE_ppa019748mg, partial [Prunus persica]	[more]
gi\|596221970\|ref\|XP_007224079.1\|	2.3e-11	26.82	hypothetical protein PRUPE_ppa015473mg, partial [Prunus persica]	[more]
gi\|595831294\|ref\|XP_007206246.1\|	1.2e-10	27.34	hypothetical protein PRUPE_ppa015607mg, partial [Prunus persica]	[more]
gi\|147821641\|emb\|CAN70431.1\|	2.0e-10	26.33	hypothetical protein VITISV_030910 [Vitis vinifera]	[more]
gi\|147867182\|emb\|CAN79956.1\|	3.7e-09	27.91	hypothetical protein VITISV_017151 [Vitis vinifera]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G001540.1	ClCG08G001540.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG08G001540	Silver-seed gourd	carwcgB0157
ClCG08G001540	Silver-seed gourd	carwcgB0654
ClCG08G001540	Cucumber (Chinese Long) v3	cucwcgB433
ClCG08G001540	Cucumber (Chinese Long) v3	cucwcgB436
ClCG08G001540	Watermelon (97103) v2	wcgwmbB336
ClCG08G001540	Wax gourd	wcgwgoB608
ClCG08G001540	Cucumber (Gy14) v1	cgywcgB417
ClCG08G001540	Cucurbita maxima (Rimu)	cmawcgB036
ClCG08G001540	Cucurbita maxima (Rimu)	cmawcgB430
ClCG08G001540	Cucurbita moschata (Rifu)	cmowcgB027
ClCG08G001540	Cucurbita moschata (Rifu)	cmowcgB429
ClCG08G001540	Wild cucumber (PI 183967)	cpiwcgB431
ClCG08G001540	Wild cucumber (PI 183967)	cpiwcgB433
ClCG08G001540	Cucumber (Chinese Long) v2	cuwcgB413
ClCG08G001540	Melon (DHL92) v3.5.1	mewcgB037
ClCG08G001540	Watermelon (97103) v1	wcgwmB401
ClCG08G001540	Cucurbita pepo (Zucchini)	cpewcgB532
ClCG08G001540	Cucurbita pepo (Zucchini)	cpewcgB712
ClCG08G001540	Bottle gourd (USVL1VR-Ls)	lsiwcgB442
ClCG08G001540	Bottle gourd (USVL1VR-Ls)	lsiwcgB440
ClCG08G001540	Cucumber (Gy14) v2	cgybwcgB379
ClCG08G001540	Cucumber (Gy14) v2	cgybwcgB381
ClCG08G001540	Melon (DHL92) v3.6.1	medwcgB036