ClCG08G001050 (gene) Watermelon (Charleston Gray)

NameClCG08G001050
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr08 : 2223328 .. 2225282 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATGTGAGTGAGAGAGAGGATACAATACGAAGATGTGGCCGTTGCAGTGTTAAGATATTATATAGGGGAATCGAAATGCCAATGCCAAAGTCATCCTCCATATCCCCAAAATAAATATTTTAGGGCTTAGATCCTACATGGGCTTTGGTCAGTCCAGTGGGCCTACTTGGGCTTTTTTGCGCCATTAACGAAGAGAAATTGTAGAATGTAAATGTGAGCATACCACATGAACTACTACTCGATCTAATGATTTAAATCTTCTTTCCCATATATTGTTAAACAAAAAAGCAACTAAAGAGTTAGGTATTCCAACTTTGACTAATATTTTATATTAGTTAAGTTATGCTCATATTGACAACTCCTCATATTTCTATTATATTCTATTGAAATACCGCCATAGTGACTTTACTAACGTATTTGTTGAGTTTTGGCAAAATATTAGAAGTGTAGTTATCCCACGTCGAAAAAATTCAAGAAGGTGATGGACTCCAAGCACTATAAAATGTTCATATGTCTTTGGTTTCAAATCGTCCCAGTTAGAAAGTTGAGTGTGTTAACACTAGTTAAATTTCCTTTTTGTATTCTCTAGTTTAAAAGTGGGAAAAAAGGTACAAGTGGTACAAATATTTGATAGCTGAAAAGCGCTTGAAAATTGCTTTCTATTCTCTCAAATTAAGGGAGTTTATATTAGATTTCACCTATTTGCTAGTGGTTTTCAAGTCAAAATGAAGAAAATTAGAACAGAAGACTAAAAAATCAAAACCGAGCCAGAATATAGTGAAAAAGAGAAGAAAAACCACAAAGTTGCCAAAAACAGGGTAGCACCGGGACGGCGCTGCCGCGTTGCTGTTTCCCGAGAGGTTGTCTGCCGCAGCACAGCGGTAGCGCCGCGACACTATCTTTCCATATTTGGCAGCACCGCGGCGCCAGTATTTCCATAAATGAAATTCTTGTATTTTTTGAAAGTTTTTTGGGCGGCCAACTCCATAAATTGGGGGTTTCTAGCAGCCCTAATCACCAATCTAAGCACGAAATCTACATACCAAAAGAGCCTCTTTTAAGTAGAGGTTTAAACGAGCCATCCATAATATTATTCCATCCAATTTTAATCTCCATAAGCGAGGAATGGATATTTCTTTGGATTGCCCCCGTTGTAGTAGAAATCCCGAGACCACTCACCACGCGCTCTTCTCCTGTTGAAATGCAAAATTAATTTTGAGTGGCTTCCCTTCTATTGCTCCTCAATTGGAATTTCAAAATTCTGAATTTAGGGATACTTGGTGCAATTGGAATAACTCCCTCAATCAAGGTGACTTATCTGTAGATGTTGTTGCTTACTGGGCAATCTAGAACAACAGGAAAAATTCTCAGATGGGCAAACCTATAGCCGATCAATTAATAAGAAGATCGTGGATTTTGAGGTATGTGGAGGATTTTCAGAGAGCCAGTCCATGAAAGGCTTAAACCACCATTATTCAAACCCACAGCCTCCTAAGTCCTCTAAGGAGTGGTAGTTTCCCCCACCGGGCGTTTTAAAATTAAATGTTGACGCTGCATGGAGTTCTAATTCCCAATCGACTGGGATTGGCACTGTTATCAGGAATTCCCTCGGTTTAACTCTAGCAATTTCTGCTCGTTCCTTAAATATGGTGTTAGATGCCCCTTTAGTGGAGATTCTCCCCATCAAAGAAGGCCTTCGTTTGGCTTTCCCCCTCCGTCGAAGTAATTTTATTATTGAATCTGATTGTTTATCGGCTATAGATCAGATTAATCGGAAATGTGAAGTTGATTTCCAAGTTGAATGTTGGATCGAGGATATTAGGGTAATGACAGAGGAATTTTCTTTTATTGGGTTTAAATTTTGTAATGGTGTGGGGCTGATAGAATAGCTAAGGTGGCTAAAATGTGTAATCTGAATGCTGGTGTAACTCAGCTCCTAACTGAATTGTAA

mRNA sequence

ATGAGATAACAACAGGAAAAATTCTCAGATGGGCAAACCTATAGCCGATCAATTAATAAGAAGATCGTGGATTTTGAGGTATGTGGAGGATTTTCAGAGAGCCAGTCCATGAAAGGCTTAAACCACCATTATTCAAACCCACAGCCTCCTAAGTCCTCTAAGGAGTGGAATTCCCTCGGTTTAACTCTAGCAATTTCTGCTCGTTCCTTAAATATGGTGTTAGATGCCCCTTTAGTGGAGATTCTCCCCATCAAAGAAGGCCTTCGTTTGGCTTTCCCCCTCCGTCGAAGTAATTTTATTATTGAATCTGATTGTTTATCGGCTATAGATCAGATTAATCGGAAATGTGAAGTTGATTTCCAAGTTGAATGTTGGATCGAGGATATTAGGCTCCTAACTGAATTGTAA

Coding sequence (CDS)

ATGAAAGGCTTAAACCACCATTATTCAAACCCACAGCCTCCTAAGTCCTCTAAGGAGTGGAATTCCCTCGGTTTAACTCTAGCAATTTCTGCTCGTTCCTTAAATATGGTGTTAGATGCCCCTTTAGTGGAGATTCTCCCCATCAAAGAAGGCCTTCGTTTGGCTTTCCCCCTCCGTCGAAGTAATTTTATTATTGAATCTGATTGTTTATCGGCTATAGATCAGATTAATCGGAAATGTGAAGTTGATTTCCAAGTTGAATGTTGGATCGAGGATATTAGGCTCCTAACTGAATTGTAA

Protein sequence

MKGLNHHYSNPQPPKSSKEWNSLGLTLAISARSLNMVLDAPLVEILPIKEGLRLAFPLRRSNFIIESDCLSAIDQINRKCEVDFQVECWIEDIRLLTEL
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G001050.1ClCG08G001050.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13456RVT_3coord: 24..96
score: 2.

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None