ClCG08G000220 (gene) Watermelon (Charleston Gray)

Overview
NameClCG08G000220
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionHfr-2-like protein
LocationCG_Chr08 : 676949 .. 678376 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAGTCCAGTGGGGAAGACAGTTTGTTTCCTATCTCTATACAATGGTAAATACTTAAGGTACCCTGATGAGGATATAGAAGGACATGGGTTTCCAGTGTTCGATCATGGCGATTTTGAAAGATTCAGCTTACTCTCTCCTTACACAAAATTCAAGATCGTGGCATCATCCACCACGGCCACTTCCTCATACGTCCATATACAATCTGCATACAACAATAAATACTGGGTCAGGTCAACCAATGACAACTCCTGGATCTGGGCCGGCGCTGATGAGATCAATGAAGATCAAACTGCATGGAATTGCACACTCTTTGAGATTCTCAACACTAATGAAAAACCCAACTATGTTAGAATCCGCCATCTTCAACTCGGCTGCTACCTTTCCTTATGGACAGCCTCTGTTTTCTACAAGTATGGCTTGTTTGCAGACTCTCCAAACATCAGAGACGACGAACGAGATCAAGTCGAATGGACCGACACAGGCTCCTATTTCGTGTTGCCCAAATTCATAGCCTTCAAAAACTCAGCTTCCGGCGCTTATCTTAGCGGCAAAGTCATCGACGGACAAAATCATCTTCAGTTCTCATCCTCCAATATCCAAGATGAAACTGTGATGCATGAGAGTTTTCCTAAGGTTTGGGGTGGTTATAACATACAATCAACCTACTTTGCTCAATATTGGGAAACTCTTGCAGCTGGTTTTTACAGTGCTTGGATTGTGGCTGACACCAAGTATCCGGATCATAGTGACCAGACTTTGTTTTATGTGCTTGATGGTGGTGGAAACAATTTAGTTGTTTTCAAAACCAAAGCGGAAGAATTCTATTGCAAACAATACAGTAGCGGAAACAAGACCAATTGCCTTTATGCACTCAACACTGCAACTTTCGATGAAGCAAAGTTTGAAGTGGTGGAGACTATAAGTGAGAGATCCATTTATGGGGTTGAATATCGCGAATCCGACGCAAGGTATTATGATAAAAACAAGGTTCTGTTGGGGACAAATTCAGAGTCTAACGCCAACGGGGTCCCCATTGAGATTGAGTTTAGTTTCCCTTATCCAATTTCCACCCAACAATCTTGGAACTCAACAAGCTCCAGAAAAGTGTTCCAAAAAGTTAGCCTTGATGCACAGCCTCCTGAGAGCATCTCAATTAATAATGCAAAACCAAACGGCATCGTCCAAGATTATTACTGGGGAGAAGGCATTACAATTTCTGGTGATGATGCAAAATTGTTAGTGAAAGTGCCTCCAAATTCTGTCGTAAATATAAGGTTTTATGCAAATCATTATTCTGCTGACATTCCCTTCAGATACACTCAAGATGATACTCGCCTTGATGGAACCAAGGTTACTACTAAATTGGATGATGGCCTCTTCACTATTATCAACCATGTCGATTTCAACTATGAGATCGAATAA

mRNA sequence

ATGTCAAGTCCAGTGGGGAAGACAGTTTGTTTCCTATCTCTATACAATGGTAAATACTTAAGGTACCCTGATGAGGATATAGAAGGACATGGGTTTCCAGTGTTCGATCATGGCGATTTTGAAAGATTCAGCTTACTCTCTCCTTACACAAAATTCAAGATCGTGGCATCATCCACCACGGCCACTTCCTCATACGTCCATATACAATCTGCATACAACAATAAATACTGGGTCAGGTCAACCAATGACAACTCCTGGATCTGGGCCGGCGCTGATGAGATCAATGAAGATCAAACTGCATGGAATTGCACACTCTTTGAGATTCTCAACACTAATGAAAAACCCAACTATGTTAGAATCCGCCATCTTCAACTCGGCTGCTACCTTTCCTTATGGACAGCCTCTGTTTTCTACAAGTATGGCTTGTTTGCAGACTCTCCAAACATCAGAGACGACGAACGAGATCAAGTCGAATGGACCGACACAGGCTCCTATTTCGTGTTGCCCAAATTCATAGCCTTCAAAAACTCAGCTTCCGGCGCTTATCTTAGCGGCAAAGTCATCGACGGACAAAATCATCTTCAGTTCTCATCCTCCAATATCCAAGATGAAACTGTGATGCATGAGAGTTTTCCTAAGGTTTGGGGTGGTTATAACATACAATCAACCTACTTTGCTCAATATTGGGAAACTCTTGCAGCTGGTTTTTACAGTGCTTGGATTGTGGCTGACACCAAGTATCCGGATCATAGTGACCAGACTTTGTTTTATGTGCTTGATGGTGGTGGAAACAATTTAGTTGTTTTCAAAACCAAAGCGGAAGAATTCTATTGCAAACAATACAGTAGCGGAAACAAGACCAATTGCCTTTATGCACTCAACACTGCAACTTTCGATGAAGCAAAGTTTGAAGTGGTGGAGACTATAAGTGAGAGATCCATTTATGGGGTTGAATATCGCGAATCCGACGCAAGGTATTATGATAAAAACAAGGTTCTGTTGGGGACAAATTCAGAGTCTAACGCCAACGGGGTCCCCATTGAGATTGAGTTTAGTTTCCCTTATCCAATTTCCACCCAACAATCTTGGAACTCAACAAGCTCCAGAAAAGTGTTCCAAAAAGTTAGCCTTGATGCACAGCCTCCTGAGAGCATCTCAATTAATAATGCAAAACCAAACGGCATCGTCCAAGATTATTACTGGGGAGAAGGCATTACAATTTCTGGTGATGATGCAAAATTGTTAGTGAAAGTGCCTCCAAATTCTGTCGTAAATATAAGGTTTTATGCAAATCATTATTCTGCTGACATTCCCTTCAGATACACTCAAGATGATACTCGCCTTGATGGAACCAAGGTTACTACTAAATTGGATGATGGCCTCTTCACTATTATCAACCATGTCGATTTCAACTATGAGATCGAATAA

Coding sequence (CDS)

ATGTCAAGTCCAGTGGGGAAGACAGTTTGTTTCCTATCTCTATACAATGGTAAATACTTAAGGTACCCTGATGAGGATATAGAAGGACATGGGTTTCCAGTGTTCGATCATGGCGATTTTGAAAGATTCAGCTTACTCTCTCCTTACACAAAATTCAAGATCGTGGCATCATCCACCACGGCCACTTCCTCATACGTCCATATACAATCTGCATACAACAATAAATACTGGGTCAGGTCAACCAATGACAACTCCTGGATCTGGGCCGGCGCTGATGAGATCAATGAAGATCAAACTGCATGGAATTGCACACTCTTTGAGATTCTCAACACTAATGAAAAACCCAACTATGTTAGAATCCGCCATCTTCAACTCGGCTGCTACCTTTCCTTATGGACAGCCTCTGTTTTCTACAAGTATGGCTTGTTTGCAGACTCTCCAAACATCAGAGACGACGAACGAGATCAAGTCGAATGGACCGACACAGGCTCCTATTTCGTGTTGCCCAAATTCATAGCCTTCAAAAACTCAGCTTCCGGCGCTTATCTTAGCGGCAAAGTCATCGACGGACAAAATCATCTTCAGTTCTCATCCTCCAATATCCAAGATGAAACTGTGATGCATGAGAGTTTTCCTAAGGTTTGGGGTGGTTATAACATACAATCAACCTACTTTGCTCAATATTGGGAAACTCTTGCAGCTGGTTTTTACAGTGCTTGGATTGTGGCTGACACCAAGTATCCGGATCATAGTGACCAGACTTTGTTTTATGTGCTTGATGGTGGTGGAAACAATTTAGTTGTTTTCAAAACCAAAGCGGAAGAATTCTATTGCAAACAATACAGTAGCGGAAACAAGACCAATTGCCTTTATGCACTCAACACTGCAACTTTCGATGAAGCAAAGTTTGAAGTGGTGGAGACTATAAGTGAGAGATCCATTTATGGGGTTGAATATCGCGAATCCGACGCAAGGTATTATGATAAAAACAAGGTTCTGTTGGGGACAAATTCAGAGTCTAACGCCAACGGGGTCCCCATTGAGATTGAGTTTAGTTTCCCTTATCCAATTTCCACCCAACAATCTTGGAACTCAACAAGCTCCAGAAAAGTGTTCCAAAAAGTTAGCCTTGATGCACAGCCTCCTGAGAGCATCTCAATTAATAATGCAAAACCAAACGGCATCGTCCAAGATTATTACTGGGGAGAAGGCATTACAATTTCTGGTGATGATGCAAAATTGTTAGTGAAAGTGCCTCCAAATTCTGTCGTAAATATAAGGTTTTATGCAAATCATTATTCTGCTGACATTCCCTTCAGATACACTCAAGATGATACTCGCCTTGATGGAACCAAGGTTACTACTAAATTGGATGATGGCCTCTTCACTATTATCAACCATGTCGATTTCAACTATGAGATCGAATAA

Protein sequence

MSSPVGKTVCFLSLYNGKYLRYPDEDIEGHGFPVFDHGDFERFSLLSPYTKFKIVASSTTATSSYVHIQSAYNNKYWVRSTNDNSWIWAGADEINEDQTAWNCTLFEILNTNEKPNYVRIRHLQLGCYLSLWTASVFYKYGLFADSPNIRDDERDQVEWTDTGSYFVLPKFIAFKNSASGAYLSGKVIDGQNHLQFSSSNIQDETVMHESFPKVWGGYNIQSTYFAQYWETLAAGFYSAWIVADTKYPDHSDQTLFYVLDGGGNNLVVFKTKAEEFYCKQYSSGNKTNCLYALNTATFDEAKFEVVETISERSIYGVEYRESDARYYDKNKVLLGTNSESNANGVPIEIEFSFPYPISTQQSWNSTSSRKVFQKVSLDAQPPESISINNAKPNGIVQDYYWGEGITISGDDAKLLVKVPPNSVVNIRFYANHYSADIPFRYTQDDTRLDGTKVTTKLDDGLFTIINHVDFNYEIE
Homology
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BLAST of ClCG08G000220 vs. TrEMBL
Match: F6HZZ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06090 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.7e-65
Identity = 159/466 (34.12%), Postives = 243/466 (52.15%), Query Frame = 1 

Query: 9   VCFLSLYNGKYLRYPDEDIEGHGFPVFDHGDFERFSLLSPYTKFKIVASSTTATSSYVHI 68
           V   S YN KYLRY  ED++ HGF  F   +     +++PY+K+++  +        VHI
Sbjct: 7   VVLKSKYNNKYLRYIHEDVQIHGFLQFSGEE-----VVTPYSKYQVERAKNGG--GLVHI 66

Query: 69  QSAYNNKYWVRSTNDNSWIWAGADEINEDQTAWNCTLFEILNTNEKPNYVRIRHLQLGCY 128
           +  YNNKYWVR + ++ WI AGADE +EDQ++W+CTLFE ++ +     +R RH+QLG Y
Sbjct: 67  RCCYNNKYWVRWSKNHWWIVAGADEPDEDQSSWSCTLFEPVHVDGDAQTLRFRHVQLGHY 126

Query: 129 LSLWTASVFYKYGLFADSPNIRDDERDQVEWTDTGSYFVLPKFIAFKNSASGAYLSGKVI 188
             LW     Y   LFA S +  +D  D     D  S  +LPK IAFK   +G YLS + I
Sbjct: 127 ACLWRLPPPYGSCLFAGSTSADNDLCDVCTIIDWESLLILPKHIAFKGD-NGHYLSARKI 186

Query: 189 DGQNHLQFSSSNIQDETVMHESFPKVWGGYNIQSTYFAQYWETLAAGFYSAWIVADTKYP 248
           +G  +L+F+SS+I D TV +E F    G   I+S YF ++W          W  +D    
Sbjct: 187 EGHPYLEFASSDIGDPTVGNEVFTTHDGSVRIKSDYFGRFWRRSPNWI---WADSDDSTT 246

Query: 249 DHSDQTLFYVLDGGGNNLVVFKTKAEEFYCKQYSSGNKTNCLYALNTATFDEAKFEVVET 308
           ++SD TLF+ +    NN+V  +      +CK+ ++  KT+CL A  +    EA+ EV E 
Sbjct: 247 NNSD-TLFWPV-RVDNNVVALRNLGNNNFCKRLTTEGKTSCLNAAVSTISREARLEVAEL 306

Query: 309 ISERSIYGVEYRESDARYYDKNKVLLGTNSESNANGVPIEIEFSFPYPISTQQSWNSTSS 368
           +  R+IY V +R  DAR YD++ +++ T    N    P   +    Y  +   +W  + S
Sbjct: 307 VLSRNIYNVNFRLMDARIYDQSVIVMTTAEAINRTHEPHTQQVKLSYTETKSSTWKGSVS 366

Query: 369 RKVFQKVSLDAQPPESISINNAKPNGIVQDYYWGEGITI-SGDDAKLLVKVPPNSVVNIR 428
            K+  K+++++  P   +      +     Y WGE  ++ +  +    V VP  + V + 
Sbjct: 367 LKLGVKITMESGVPFIANGKLEISSEFSGAYEWGETESVTTAMETMYNVTVPAMTRVTVS 426

Query: 429 FYANHYSADIPFRYTQDDTRLDGTKVTTKLDDGLFTIINHVDFNYE 474
                 S D+PF YTQ DT  DG  V   +DDG++  +N  +  YE
Sbjct: 427 MIGTKGSCDVPFSYTQRDTLTDGKIVVDNMDDGVYVGVNCFNVKYE 459

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BLAST of ClCG08G000220 vs. TrEMBL
Match: A5AYS3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020655 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.2e-62
Identity = 158/469 (33.69%), Postives = 238/469 (50.75%), Query Frame = 1 

Query: 9   VCFLSLYNGKYLRYPDEDIEGHGFPVFDHGDFERFSLLSPYTKFKIVASSTTATSSYVHI 68
           V F S YN K LRY  ED E HGF  F   +     +++PY+K+ +  +        VHI
Sbjct: 7   VVFKSKYNNKXLRYIHEDGEIHGFLQFSGEE-----VMTPYSKYHVEMAKNG--KGLVHI 66

Query: 69  QSAYNNKYWVRSTNDNSWIWAGADEINEDQTAWNCTLFEILNTNEKPNYVRIRHLQLGCY 128
           +  YNNKYWVR + ++ WI AGADE +EDQ+ W CTLFE +  +     +R RH+QLG Y
Sbjct: 67  RCCYNNKYWVRWSENHWWIVAGADETDEDQSLWTCTLFEPVYVDGDAQTLRFRHVQLGHY 126

Query: 129 LSLWTASVFYKYGLFADSPNIRDDERDQVEWTDTGSYFVLPKFIAFKNSASGAYLSGKVI 188
             LW     Y   LFA S +   D  D     D  S  +LPK IAFK   +  YLS + I
Sbjct: 127 ACLWRLPPPYGSCLFAGSASPDKDLYDVFTIIDWESLLILPKHIAFKGD-NDYYLSARTI 186

Query: 189 DGQNHLQFSSSNIQDETVMHESFPKVWGGYNIQSTYFAQYWETLAAGFYSAWIVADT-KY 248
           +G+ +L+F+S++I D TV +E F    G   I+S YF ++W   +      WI+AD+   
Sbjct: 187 EGRPYLEFASTDIGDPTVGNEVFTTQDGSARIKSDYFGRFWRRSSPN----WILADSDDS 246

Query: 249 PDHSDQTLFYVLDGGGNNLVVFKTKAEEFYCKQYSSGNKTNCLYALNTATFDEAKFEVVE 308
             ++  TLF+ +     N+V  +      +CK+ ++  KT+CL A  +    EA+ EV E
Sbjct: 247 TTNNSNTLFWPV-RVDKNVVALRNLGNNNFCKRLTTEGKTSCLNAGVSTISREARLEVAE 306

Query: 309 TISERSIYGVEYRESDARYYDKNKVLLGTNSESNANGVPIEIEFSFPYPISTQQSWNSTS 368
            +  R+IY V +R  DAR YD+  +++ T    N    P   +    Y  +  ++W  + 
Sbjct: 307 LVLSRNIYNVNFRLMDARIYDQRVIVMTTGGAINMTHEPHTQQVKLSYTETKSRTWKGSV 366

Query: 369 SRKVFQKVSLDAQPP--ESISINNAKPNGIVQDYYWGEGITI-SGDDAKLLVKVPPNSVV 428
           S K   K+++++  P      +  +        Y WGE  ++ +  +    V VP  + V
Sbjct: 367 SLKSGVKITIESGVPFIADGKLEVSSEFSGTGTYEWGETESLTTAXETVYSVTVPARTRV 426

Query: 429 NIRFYANHYSADIPFRYTQDDTRLDGTKVTTKLDDGLFTIINHVDFNYE 474
            I   A   S D+PF YTQ DT  DG  V   +DDG++  +N  +  Y+
Sbjct: 427 TISMIATQGSYDVPFSYTQRDTLTDGQNVVYNMDDGVYVGVNCFNVEYQ 462

[Close]
BLAST of ClCG08G000220 vs. TrEMBL
Match: D7U3H9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06060 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.2e-62
Identity = 158/469 (33.69%), Postives = 238/469 (50.75%), Query Frame = 1 

Query: 9   VCFLSLYNGKYLRYPDEDIEGHGFPVFDHGDFERFSLLSPYTKFKIVASSTTATSSYVHI 68
           V F S YN K LRY  ED E HGF  F   +     +++PY+K+ +  +        VHI
Sbjct: 7   VVFKSKYNNKCLRYIHEDGEIHGFLQFSGEE-----VMTPYSKYHVEMAKNG--KGLVHI 66

Query: 69  QSAYNNKYWVRSTNDNSWIWAGADEINEDQTAWNCTLFEILNTNEKPNYVRIRHLQLGCY 128
           +  YNNKYWVR + ++ WI AGADE +EDQ+ W CTLFE +  +     +R RH+QLG Y
Sbjct: 67  RCCYNNKYWVRWSENHWWIVAGADETDEDQSLWTCTLFEPVYVDGDAQTLRFRHVQLGHY 126

Query: 129 LSLWTASVFYKYGLFADSPNIRDDERDQVEWTDTGSYFVLPKFIAFKNSASGAYLSGKVI 188
             LW     Y   LFA S +   D  D     D  S  +LPK IAFK   +  YLS + I
Sbjct: 127 ACLWRLPPPYGSCLFAGSASPDKDLYDVFTIIDWESLLILPKHIAFKGD-NDYYLSARTI 186

Query: 189 DGQNHLQFSSSNIQDETVMHESFPKVWGGYNIQSTYFAQYWETLAAGFYSAWIVADT-KY 248
           +G+ +L+F+S++I D TV +E F    G   I+S YF ++W          WI+AD+   
Sbjct: 187 EGRPYLEFASTDIGDPTVGNEVFTTQDGSARIKSDYFGRFWRR-----SPNWILADSDDS 246

Query: 249 PDHSDQTLFYVLDGGGNNLVVFKTKAEEFYCKQYSSGNKTNCLYALNTATFDEAKFEVVE 308
            +++  TLF+ +     N+V  +      +CK+ ++  KT+CL A  +    EA+ EV E
Sbjct: 247 TNNNSNTLFWPV-RVDKNVVALRNLGNNNFCKRLTTEGKTSCLNAGVSTISREARLEVAE 306

Query: 309 TISERSIYGVEYRESDARYYDKNKVLLGTNSESNANGVPIEIEFSFPYPISTQQSWNSTS 368
            +  R+IY V +R  DAR YD+  +++ T    N    P   +    Y  +  ++W  + 
Sbjct: 307 LVLSRNIYNVNFRLMDARIYDQRVIVMTTGGAINMTQEPHTQQVKLSYTETNSRTWKGSV 366

Query: 369 SRKVFQKVSLDAQPP--ESISINNAKPNGIVQDYYWGEGITI-SGDDAKLLVKVPPNSVV 428
           S K   K+++++  P      +  +        Y WGE  ++ +  +    V VP  + V
Sbjct: 367 SLKSGVKITIESGVPFIADGKLEVSSEFSGTGTYEWGETESLTTAKETVYSVTVPARTRV 426

Query: 429 NIRFYANHYSADIPFRYTQDDTRLDGTKVTTKLDDGLFTIINHVDFNYE 474
            I   A   S D+PF YTQ DT  DG  V   +DDG++  +N  +  Y+
Sbjct: 427 TISMIATQGSCDVPFSYTQRDTLTDGKNVVYNMDDGVYVGVNCFNVEYQ 461

[Close]
BLAST of ClCG08G000220 vs. TrEMBL
Match: D7U3H5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06000 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.2e-61
Identity = 154/467 (32.98%), Postives = 239/467 (51.18%), Query Frame = 1 

Query: 9   VCFLSLYNGKYLRYPDEDIEGHGFPVFDHGDFERFSLLSPYTKFKIVASSTTATSSYVHI 68
           V   S YN KYLRY  ED++ HGF  F   +     +++PY+K+++  +        VHI
Sbjct: 7   VVLKSKYNDKYLRYIHEDVQIHGFLQFSGEE-----VVTPYSKYQVERAKNG--KGLVHI 66

Query: 69  QSAYNNKYWVRSTNDNSWIWAGADEINEDQTAWNCTLFEILNTNEKPNYVRIRHLQLGCY 128
           +  YNNKYWVR + ++ WI AGADE +EDQ++W+CTLFE ++ +     +R RH+QLG Y
Sbjct: 67  RCCYNNKYWVRWSKNHWWIVAGADEPDEDQSSWSCTLFEPVHVDGNAQTLRFRHVQLGHY 126

Query: 129 LSLWTASVFYKYGLFADSPNIRDDERDQVEWTDTGSYFVLPKFIAFKNSASGAYLSGKVI 188
             LW     Y   LFA S +   D  D     D  S  +LPK +AFK   +G YLS + I
Sbjct: 127 ACLWRLPPPYGSCLFAGSASPNKDLCDVCTIIDWESLLILPKHVAFKGD-NGNYLSARTI 186

Query: 189 DGQNHLQFSSSNIQDETVMHESFPKVWGGYNIQSTYFAQYWETLAAGFYSAWIVADTKYP 248
           +G  +L+F+SS+I D TV +E F        I+S +F ++W          W  +D    
Sbjct: 187 EGHPYLEFASSDIGDPTVGNEVFTTHDRSVRIKSHHFGRFWRRSPNWI---WADSDDSTT 246

Query: 249 DHSDQTLFYVLDGGGNNLVVFKTKAEEFYCKQYSSGNKTNCLYALNTATFDEAKFEVVET 308
           ++SD TLF+ +     N+V  +      +C + ++  KT+CL A  +    EA+ EV E 
Sbjct: 247 NNSD-TLFWPV-RVDKNVVALRNFGNNNFCMRLTTEGKTSCLNAGVSTISREARLEVAEL 306

Query: 309 ISERSIYGVEYRESDARYYDKNKVLLGTNSESNANGVPIEIEFSFPYPISTQQSWNSTSS 368
           +  R+IY V +R  DAR YD+  +++ T    N    P   +    Y  +  ++W  + S
Sbjct: 307 VLSRNIYNVNFRLMDARIYDQRVIIMTTGEAINMTHEPHTQQVKLSYTETKSRTWKGSVS 366

Query: 369 RKVFQKVSLDAQPPESISINNAKPNGIVQDYYWG--EGITISGDDAKLLVKVPPNSVVNI 428
            K+  K+++++  P          +     Y WG  E +T +  +    V VP  + V +
Sbjct: 367 LKLGVKITMESGVPFIADGKLEISSEFSGTYEWGGTESVT-TAMETLYNVTVPAMTRVTV 426

Query: 429 RFYANHYSADIPFRYTQDDTRLDGTKVTTKLDDGLFTIINHVDFNYE 474
              A   S D+PF Y+Q DT  DG  V   +DDG++  +N  +  Y+
Sbjct: 427 SMIATQGSCDVPFSYSQRDTLTDGKNVIYNMDDGVYNGVNCFNVKYQ 459

[Close]
BLAST of ClCG08G000220 vs. TrEMBL
Match: F6HZZ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06110 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 9.3e-61
Identity = 154/466 (33.05%), Postives = 239/466 (51.29%), Query Frame = 1 

Query: 9   VCFLSLYNGKYLRYPDEDIEGHGFPVFDHGDFERFSLLSPYTKFKIVASSTTATSSYVHI 68
           V   S YN KYLRY  ED++ HGF  F   +     +++PY+K+++  +        VHI
Sbjct: 7   VVLKSKYNNKYLRYIHEDVQIHGFLQFSGEE-----VVTPYSKYQVEMAKNG--KGLVHI 66

Query: 69  QSAYNNKYWVRSTNDNSWIWAGADEINEDQTAWNCTLFEILNTNEKPNYVRIRHLQLGCY 128
           +  YNNKYWVR + ++ WI AGADE +EDQ++W+CTLFE +  +     ++ RH+QLG Y
Sbjct: 67  RCCYNNKYWVRWSKNHWWIVAGADEPDEDQSSWSCTLFEPVYVDGDAQTLQFRHVQLGHY 126

Query: 129 LSLWTASVFYKYGLFADSPNIRDDERDQVEWTDTGSYFVLPKFIAFKNSASGAYLSGKVI 188
             LW     Y   LFA S +  +D  D     D  S  +LPK IAFK   +G +LS + I
Sbjct: 127 ACLWRLPPPYGSCLFAGSTSPDNDLCDVCTIIDWESLLLLPKHIAFKGD-NGYFLSARTI 186

Query: 189 DGQNHLQFSSSNIQDETVMHESFPKVWGGYNIQSTYFAQYWETLAAGFYSAWIVADT-KY 248
           +G  +L+F+SS+I D TV +E F    G  +I+S YF ++W          WI AD+   
Sbjct: 187 EGHPYLEFASSDIGDPTVGNEVFTTHDGSVHIKSDYFGRFWRR-----SPNWIWADSDDS 246

Query: 249 PDHSDQTLFYVLDGGGNNLVVFKTKAEEFYCKQYSSGNKTNCLYALNTATFDEAKFEVVE 308
             ++  TLF+ +     N+V  +      +CK+ ++  K +CL A  +    EA+ EV E
Sbjct: 247 TTNNPDTLFWPV-RVDKNVVALRNLGNNNFCKRLTTEGKISCLNAGVSTISREARLEVAE 306

Query: 309 TISERSIYGVEYRESDARYYDKNKVLLGTNSESNANGVPIEIEFSFPYPISTQQSWNSTS 368
            +  R+IY V +R  DAR YD+  +++ T    N        +    Y  +  ++W  + 
Sbjct: 307 LVLSRNIYNVNFRLMDARTYDQRVIVMTTGEAINMTQELHTQQVKLSYTETKSRTWKGSV 366

Query: 369 SRKVFQKVSLDAQPPESISINNAKPNGIVQDYYWGEGITI-SGDDAKLLVKVPPNSVVNI 428
           S K+  K+++++  P          +     Y WGE  ++ +  +    V VP  + V +
Sbjct: 367 SLKLGVKMTMESGVPFIADGKLEISSEFSGTYEWGETESVTTAMETVYNVTVPAMTKVTV 426

Query: 429 RFYANHYSADIPFRYTQDDTRLDGTKVTTKLDDGLFTIINHVDFNY 473
              A   S D+PF YTQ DT  DG  V   +DDG++  +N  +  Y
Sbjct: 427 SMIATQGSCDVPFSYTQHDTLTDGKNVVYNMDDGVYVGVNCFNVKY 458

[Close]
BLAST of ClCG08G000220 vs. NCBI nr
Match: gi|225465425|ref|XP_002264858.1| (PREDICTED: uncharacterized protein LOC100241465 [Vitis vinifera])

HSP 1 Score: 257.3 bits (656), Expect = 5.2e-65
Identity = 159/466 (34.12%), Postives = 243/466 (52.15%), Query Frame = 1 

Query: 9   VCFLSLYNGKYLRYPDEDIEGHGFPVFDHGDFERFSLLSPYTKFKIVASSTTATSSYVHI 68
           V   S YN KYLRY  ED++ HGF  F   +     +++PY+K+++  +        VHI
Sbjct: 7   VVLKSKYNNKYLRYIHEDVQIHGFLQFSGEE-----VVTPYSKYQVERAKNGG--GLVHI 66

Query: 69  QSAYNNKYWVRSTNDNSWIWAGADEINEDQTAWNCTLFEILNTNEKPNYVRIRHLQLGCY 128
           +  YNNKYWVR + ++ WI AGADE +EDQ++W+CTLFE ++ +     +R RH+QLG Y
Sbjct: 67  RCCYNNKYWVRWSKNHWWIVAGADEPDEDQSSWSCTLFEPVHVDGDAQTLRFRHVQLGHY 126

Query: 129 LSLWTASVFYKYGLFADSPNIRDDERDQVEWTDTGSYFVLPKFIAFKNSASGAYLSGKVI 188
             LW     Y   LFA S +  +D  D     D  S  +LPK IAFK   +G YLS + I
Sbjct: 127 ACLWRLPPPYGSCLFAGSTSADNDLCDVCTIIDWESLLILPKHIAFKGD-NGHYLSARKI 186

Query: 189 DGQNHLQFSSSNIQDETVMHESFPKVWGGYNIQSTYFAQYWETLAAGFYSAWIVADTKYP 248
           +G  +L+F+SS+I D TV +E F    G   I+S YF ++W          W  +D    
Sbjct: 187 EGHPYLEFASSDIGDPTVGNEVFTTHDGSVRIKSDYFGRFWRRSPNWI---WADSDDSTT 246

Query: 249 DHSDQTLFYVLDGGGNNLVVFKTKAEEFYCKQYSSGNKTNCLYALNTATFDEAKFEVVET 308
           ++SD TLF+ +    NN+V  +      +CK+ ++  KT+CL A  +    EA+ EV E 
Sbjct: 247 NNSD-TLFWPV-RVDNNVVALRNLGNNNFCKRLTTEGKTSCLNAAVSTISREARLEVAEL 306

Query: 309 ISERSIYGVEYRESDARYYDKNKVLLGTNSESNANGVPIEIEFSFPYPISTQQSWNSTSS 368
           +  R+IY V +R  DAR YD++ +++ T    N    P   +    Y  +   +W  + S
Sbjct: 307 VLSRNIYNVNFRLMDARIYDQSVIVMTTAEAINRTHEPHTQQVKLSYTETKSSTWKGSVS 366

Query: 369 RKVFQKVSLDAQPPESISINNAKPNGIVQDYYWGEGITI-SGDDAKLLVKVPPNSVVNIR 428
            K+  K+++++  P   +      +     Y WGE  ++ +  +    V VP  + V + 
Sbjct: 367 LKLGVKITMESGVPFIANGKLEISSEFSGAYEWGETESVTTAMETMYNVTVPAMTRVTVS 426

Query: 429 FYANHYSADIPFRYTQDDTRLDGTKVTTKLDDGLFTIINHVDFNYE 474
                 S D+PF YTQ DT  DG  V   +DDG++  +N  +  YE
Sbjct: 427 MIGTKGSCDVPFSYTQRDTLTDGKIVVDNMDDGVYVGVNCFNVKYE 459

[Close]
BLAST of ClCG08G000220 vs. NCBI nr
Match: gi|147838248|emb|CAN71829.1| (hypothetical protein VITISV_020655 [Vitis vinifera])

HSP 1 Score: 248.1 bits (632), Expect = 3.2e-62
Identity = 158/469 (33.69%), Postives = 238/469 (50.75%), Query Frame = 1 

Query: 9   VCFLSLYNGKYLRYPDEDIEGHGFPVFDHGDFERFSLLSPYTKFKIVASSTTATSSYVHI 68
           V F S YN K LRY  ED E HGF  F   +     +++PY+K+ +  +        VHI
Sbjct: 7   VVFKSKYNNKXLRYIHEDGEIHGFLQFSGEE-----VMTPYSKYHVEMAKNG--KGLVHI 66

Query: 69  QSAYNNKYWVRSTNDNSWIWAGADEINEDQTAWNCTLFEILNTNEKPNYVRIRHLQLGCY 128
           +  YNNKYWVR + ++ WI AGADE +EDQ+ W CTLFE +  +     +R RH+QLG Y
Sbjct: 67  RCCYNNKYWVRWSENHWWIVAGADETDEDQSLWTCTLFEPVYVDGDAQTLRFRHVQLGHY 126

Query: 129 LSLWTASVFYKYGLFADSPNIRDDERDQVEWTDTGSYFVLPKFIAFKNSASGAYLSGKVI 188
             LW     Y   LFA S +   D  D     D  S  +LPK IAFK   +  YLS + I
Sbjct: 127 ACLWRLPPPYGSCLFAGSASPDKDLYDVFTIIDWESLLILPKHIAFKGD-NDYYLSARTI 186

Query: 189 DGQNHLQFSSSNIQDETVMHESFPKVWGGYNIQSTYFAQYWETLAAGFYSAWIVADT-KY 248
           +G+ +L+F+S++I D TV +E F    G   I+S YF ++W   +      WI+AD+   
Sbjct: 187 EGRPYLEFASTDIGDPTVGNEVFTTQDGSARIKSDYFGRFWRRSSPN----WILADSDDS 246

Query: 249 PDHSDQTLFYVLDGGGNNLVVFKTKAEEFYCKQYSSGNKTNCLYALNTATFDEAKFEVVE 308
             ++  TLF+ +     N+V  +      +CK+ ++  KT+CL A  +    EA+ EV E
Sbjct: 247 TTNNSNTLFWPV-RVDKNVVALRNLGNNNFCKRLTTEGKTSCLNAGVSTISREARLEVAE 306

Query: 309 TISERSIYGVEYRESDARYYDKNKVLLGTNSESNANGVPIEIEFSFPYPISTQQSWNSTS 368
            +  R+IY V +R  DAR YD+  +++ T    N    P   +    Y  +  ++W  + 
Sbjct: 307 LVLSRNIYNVNFRLMDARIYDQRVIVMTTGGAINMTHEPHTQQVKLSYTETKSRTWKGSV 366

Query: 369 SRKVFQKVSLDAQPP--ESISINNAKPNGIVQDYYWGEGITI-SGDDAKLLVKVPPNSVV 428
           S K   K+++++  P      +  +        Y WGE  ++ +  +    V VP  + V
Sbjct: 367 SLKSGVKITIESGVPFIADGKLEVSSEFSGTGTYEWGETESLTTAXETVYSVTVPARTRV 426

Query: 429 NIRFYANHYSADIPFRYTQDDTRLDGTKVTTKLDDGLFTIINHVDFNYE 474
            I   A   S D+PF YTQ DT  DG  V   +DDG++  +N  +  Y+
Sbjct: 427 TISMIATQGSYDVPFSYTQRDTLTDGQNVVYNMDDGVYVGVNCFNVEYQ 462

[Close]
BLAST of ClCG08G000220 vs. NCBI nr
Match: gi|225465423|ref|XP_002264775.1| (PREDICTED: uncharacterized protein LOC100251726 [Vitis vinifera])

HSP 1 Score: 248.1 bits (632), Expect = 3.2e-62
Identity = 158/469 (33.69%), Postives = 238/469 (50.75%), Query Frame = 1 

Query: 9   VCFLSLYNGKYLRYPDEDIEGHGFPVFDHGDFERFSLLSPYTKFKIVASSTTATSSYVHI 68
           V F S YN K LRY  ED E HGF  F   +     +++PY+K+ +  +        VHI
Sbjct: 7   VVFKSKYNNKCLRYIHEDGEIHGFLQFSGEE-----VMTPYSKYHVEMAKNG--KGLVHI 66

Query: 69  QSAYNNKYWVRSTNDNSWIWAGADEINEDQTAWNCTLFEILNTNEKPNYVRIRHLQLGCY 128
           +  YNNKYWVR + ++ WI AGADE +EDQ+ W CTLFE +  +     +R RH+QLG Y
Sbjct: 67  RCCYNNKYWVRWSENHWWIVAGADETDEDQSLWTCTLFEPVYVDGDAQTLRFRHVQLGHY 126

Query: 129 LSLWTASVFYKYGLFADSPNIRDDERDQVEWTDTGSYFVLPKFIAFKNSASGAYLSGKVI 188
             LW     Y   LFA S +   D  D     D  S  +LPK IAFK   +  YLS + I
Sbjct: 127 ACLWRLPPPYGSCLFAGSASPDKDLYDVFTIIDWESLLILPKHIAFKGD-NDYYLSARTI 186

Query: 189 DGQNHLQFSSSNIQDETVMHESFPKVWGGYNIQSTYFAQYWETLAAGFYSAWIVADT-KY 248
           +G+ +L+F+S++I D TV +E F    G   I+S YF ++W          WI+AD+   
Sbjct: 187 EGRPYLEFASTDIGDPTVGNEVFTTQDGSARIKSDYFGRFWRR-----SPNWILADSDDS 246

Query: 249 PDHSDQTLFYVLDGGGNNLVVFKTKAEEFYCKQYSSGNKTNCLYALNTATFDEAKFEVVE 308
            +++  TLF+ +     N+V  +      +CK+ ++  KT+CL A  +    EA+ EV E
Sbjct: 247 TNNNSNTLFWPV-RVDKNVVALRNLGNNNFCKRLTTEGKTSCLNAGVSTISREARLEVAE 306

Query: 309 TISERSIYGVEYRESDARYYDKNKVLLGTNSESNANGVPIEIEFSFPYPISTQQSWNSTS 368
            +  R+IY V +R  DAR YD+  +++ T    N    P   +    Y  +  ++W  + 
Sbjct: 307 LVLSRNIYNVNFRLMDARIYDQRVIVMTTGGAINMTQEPHTQQVKLSYTETNSRTWKGSV 366

Query: 369 SRKVFQKVSLDAQPP--ESISINNAKPNGIVQDYYWGEGITI-SGDDAKLLVKVPPNSVV 428
           S K   K+++++  P      +  +        Y WGE  ++ +  +    V VP  + V
Sbjct: 367 SLKSGVKITIESGVPFIADGKLEVSSEFSGTGTYEWGETESLTTAKETVYSVTVPARTRV 426

Query: 429 NIRFYANHYSADIPFRYTQDDTRLDGTKVTTKLDDGLFTIINHVDFNYE 474
            I   A   S D+PF YTQ DT  DG  V   +DDG++  +N  +  Y+
Sbjct: 427 TISMIATQGSCDVPFSYTQRDTLTDGKNVVYNMDDGVYVGVNCFNVEYQ 461

[Close]
BLAST of ClCG08G000220 vs. NCBI nr
Match: gi|225465417|ref|XP_002264098.1| (PREDICTED: uncharacterized protein LOC100256767 [Vitis vinifera])

HSP 1 Score: 244.2 bits (622), Expect = 4.6e-61
Identity = 154/467 (32.98%), Postives = 239/467 (51.18%), Query Frame = 1 

Query: 9   VCFLSLYNGKYLRYPDEDIEGHGFPVFDHGDFERFSLLSPYTKFKIVASSTTATSSYVHI 68
           V   S YN KYLRY  ED++ HGF  F   +     +++PY+K+++  +        VHI
Sbjct: 7   VVLKSKYNDKYLRYIHEDVQIHGFLQFSGEE-----VVTPYSKYQVERAKNG--KGLVHI 66

Query: 69  QSAYNNKYWVRSTNDNSWIWAGADEINEDQTAWNCTLFEILNTNEKPNYVRIRHLQLGCY 128
           +  YNNKYWVR + ++ WI AGADE +EDQ++W+CTLFE ++ +     +R RH+QLG Y
Sbjct: 67  RCCYNNKYWVRWSKNHWWIVAGADEPDEDQSSWSCTLFEPVHVDGNAQTLRFRHVQLGHY 126

Query: 129 LSLWTASVFYKYGLFADSPNIRDDERDQVEWTDTGSYFVLPKFIAFKNSASGAYLSGKVI 188
             LW     Y   LFA S +   D  D     D  S  +LPK +AFK   +G YLS + I
Sbjct: 127 ACLWRLPPPYGSCLFAGSASPNKDLCDVCTIIDWESLLILPKHVAFKGD-NGNYLSARTI 186

Query: 189 DGQNHLQFSSSNIQDETVMHESFPKVWGGYNIQSTYFAQYWETLAAGFYSAWIVADTKYP 248
           +G  +L+F+SS+I D TV +E F        I+S +F ++W          W  +D    
Sbjct: 187 EGHPYLEFASSDIGDPTVGNEVFTTHDRSVRIKSHHFGRFWRRSPNWI---WADSDDSTT 246

Query: 249 DHSDQTLFYVLDGGGNNLVVFKTKAEEFYCKQYSSGNKTNCLYALNTATFDEAKFEVVET 308
           ++SD TLF+ +     N+V  +      +C + ++  KT+CL A  +    EA+ EV E 
Sbjct: 247 NNSD-TLFWPV-RVDKNVVALRNFGNNNFCMRLTTEGKTSCLNAGVSTISREARLEVAEL 306

Query: 309 ISERSIYGVEYRESDARYYDKNKVLLGTNSESNANGVPIEIEFSFPYPISTQQSWNSTSS 368
           +  R+IY V +R  DAR YD+  +++ T    N    P   +    Y  +  ++W  + S
Sbjct: 307 VLSRNIYNVNFRLMDARIYDQRVIIMTTGEAINMTHEPHTQQVKLSYTETKSRTWKGSVS 366

Query: 369 RKVFQKVSLDAQPPESISINNAKPNGIVQDYYWG--EGITISGDDAKLLVKVPPNSVVNI 428
            K+  K+++++  P          +     Y WG  E +T +  +    V VP  + V +
Sbjct: 367 LKLGVKITMESGVPFIADGKLEISSEFSGTYEWGGTESVT-TAMETLYNVTVPAMTRVTV 426

Query: 429 RFYANHYSADIPFRYTQDDTRLDGTKVTTKLDDGLFTIINHVDFNYE 474
              A   S D+PF Y+Q DT  DG  V   +DDG++  +N  +  Y+
Sbjct: 427 SMIATQGSCDVPFSYSQRDTLTDGKNVIYNMDDGVYNGVNCFNVKYQ 459

[Close]
BLAST of ClCG08G000220 vs. NCBI nr
Match: gi|694401999|ref|XP_009376017.1| (PREDICTED: uncharacterized protein LOC103964769 [Pyrus x bretschneideri])

HSP 1 Score: 242.7 bits (618), Expect = 1.3e-60
Identity = 164/482 (34.02%), Postives = 241/482 (50.00%), Query Frame = 1 

Query: 1   MSSPVGKTVCFLSLYNGKYLRYPDEDIEGHGFPVFDHGDFERFSLLSPYTKFKI-VASST 60
           M+  + + V   S YN KYL Y  ED++ HGF  F   +     ++SPY K ++ +A S+
Sbjct: 1   MAPELPRYVVLQSRYNAKYLNYLKEDVQIHGFLKFSGQE-----VVSPYAKLQVEMAKSS 60

Query: 61  TATSSYVHIQSAYNNKYWVRSTNDNSWIWAGADEINEDQTAWNCTLFE--ILNTNEKPNY 120
            A    VHI+  YNNKYWVR +  + WI AGADE  ED++ W+CTLFE   ++ ++    
Sbjct: 61  GARKGLVHIRCCYNNKYWVRWSQTHHWIVAGADEPQEDESKWSCTLFEPVYVDEHDPAQG 120

Query: 121 VRIRHLQLGCYLSLWTASVFYKYGLFADSPNIRDDERDQVEWTDTGSYFVLPKFIAFKNS 180
           VR+RH+QL  Y  LW     Y+  L+A S     D  D     D  S  VLPK IA K  
Sbjct: 121 VRLRHVQLRNYACLWRTDPPYESCLYAGSETPDSDLCDVCLIVDWESLLVLPKHIALKGD 180

Query: 181 ASGAYLSGKVIDGQNHLQFSSSNIQDETVMHESFPKVWGGYNIQSTYFAQYWETLAAGFY 240
            +G YLS + I+G  +LQFSS +I D TV +E      G   I+S +  ++W        
Sbjct: 181 -NGKYLSAQWIEGYPYLQFSSDDIGDPTVGNEILQTGDGSIRIKSDHHGKFWRR-----S 240

Query: 241 SAWIVADTKYPDHSD--QTLFYVLDGGGNNLVVFKTKAEEFYCKQYSSGNKTNCLYALNT 300
             WI AD++  ++ +    LF+ +   G   +  +      +CK+ ++  K +CL A   
Sbjct: 241 PNWIWADSELHNNENNMDMLFWPVKVDG-KFMALRNLGNNSFCKRLTTEGKYHCLNAAVP 300

Query: 301 ATFDEAKFEVVETISERSIYGVEYRESDARYYDKNKVLLGTNSESNANGVPIEIEFSFPY 360
               EA+FE+ E +  RSIY V YR  DAR Y++  V + T    N       IE    Y
Sbjct: 301 TITHEARFELEEVVVSRSIYNVNYRVLDARVYNQTVVTMATGEALNRTKEQNTIEMKLSY 360

Query: 361 PISTQQSWNSTSSRKVFQKVSLDAQPPESISINNAK---PNGIVQDYYWGEGITI-SGDD 420
             +    WN++ S K+  K +L+A  P    I N K      +   + WGE  T  S  +
Sbjct: 361 KNTRSSVWNTSVSLKLGIKTTLEAGVP---LIENGKIEVSAEVGAGFQWGETETSESVVE 420

Query: 421 AKLLVKVPPNSVVNIRFYANHYSADIPFRYTQDDTRLDGTKVTTKLDDGLFTIINHVDFN 474
               V VPP + V     A   + D+PF YTQ D   +G +    +DDG++T +N+ +F 
Sbjct: 421 TVYKVTVPPMTRVKESMLATRGACDVPFSYTQRDVLTNGKQNIYNMDDGVYTGVNNYNFQ 467

The following BLAST results are available for this feature:
BLAST of ClCG08G000220 vs. TrEMBL
Match NameE-valueIdentityDescription
F6HZZ6_VITVI3.7e-6534.12Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06090 PE=4 SV=... [more]
A5AYS3_VITVI2.2e-6233.69Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020655 PE=4 SV=1[more]
D7U3H9_VITVI2.2e-6233.69Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06060 PE=4 SV=... [more]
D7U3H5_VITVI3.2e-6132.98Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06000 PE=4 SV=... [more]
F6HZZ7_VITVI9.3e-6133.05Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06110 PE=4 SV=... [more]
BLAST of ClCG08G000220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|225465425|ref|XP_002264858.1|5.2e-6534.12PREDICTED: uncharacterized protein LOC100241465 [Vitis vinifera][more]
gi|147838248|emb|CAN71829.1|3.2e-6233.69hypothetical protein VITISV_020655 [Vitis vinifera][more]
gi|225465423|ref|XP_002264775.1|3.2e-6233.69PREDICTED: uncharacterized protein LOC100251726 [Vitis vinifera][more]
gi|225465417|ref|XP_002264098.1|4.6e-6132.98PREDICTED: uncharacterized protein LOC100256767 [Vitis vinifera][more]
gi|694401999|ref|XP_009376017.1|1.3e-6034.02PREDICTED: uncharacterized protein LOC103964769 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008998Agglutinin
IPR023307Aerolysin-like toxin, beta complex domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G000220.1ClCG08G000220.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008998Agglutinin domainPFAMPF07468Agglutinincoord: 167..309
score: 1.1E-10coord: 7..155
score: 9.7
IPR008998Agglutinin domainSMARTSM00791agglutinincoord: 166..307
score: 2.2E-15coord: 7..159
score: 8.
IPR008998Agglutinin domainunknownSSF50382Agglutinincoord: 7..159
score: 6.41E-31coord: 164..307
score: 4.32
IPR023307Aerolysin-like toxin, beta complex domainGENE3DG3DSA:2.170.15.10coord: 312..473
score: 8.8
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 7..161
score: 4.1E-29coord: 168..308
score: 6.4
NoneNo IPR availablePANTHERPTHR39244FAMILY NOT NAMEDcoord: 1..475
score: 6.5
NoneNo IPR availablePANTHERPTHR39244:SF1SUBFAMILY NOT NAMEDcoord: 1..475
score: 6.5
NoneNo IPR availableunknownSSF56973Aerolisin/ETX pore-forming domaincoord: 222..474
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG08G000220Cla003866Watermelon (97103) v1wcgwmB404
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG08G000220Cucurbita maxima (Rimu)cmawcgB030
ClCG08G000220Cucurbita moschata (Rifu)cmowcgB027
ClCG08G000220Wild cucumber (PI 183967)cpiwcgB431
ClCG08G000220Cucumber (Chinese Long) v2cuwcgB413
ClCG08G000220Melon (DHL92) v3.5.1mewcgB037
ClCG08G000220Cucurbita pepo (Zucchini)cpewcgB712
ClCG08G000220Bottle gourd (USVL1VR-Ls)lsiwcgB440
ClCG08G000220Cucumber (Gy14) v2cgybwcgB379
ClCG08G000220Melon (DHL92) v3.6.1medwcgB036
ClCG08G000220Cucumber (Chinese Long) v3cucwcgB433
ClCG08G000220Watermelon (97103) v2wcgwmbB336
ClCG08G000220Wax gourdwcgwgoB607
ClCG08G000220Wax gourdwcgwgoB609
ClCG08G000220Cucumber (Gy14) v1cgywcgB052