ClCG08G000050 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATGGCGAAGAGTTCGGCGGACAACAGTGGAAGAAGATGGCAGAAGGACGATGAGGTTGGAGGCGTTGGAAGTAGAGGTCGAGGCTGAGCATCGGTGGCTGGAAAAGCAATTTTGGGGAAGCGGCGAATTATGTGAAGAGATGGGTAAAGGAACTGATGCGCACGTGAAATTTCAAAAGGTGGGGCCAATGATGTGGCAAAAAACTGATAGGAAAGAGGAAGAGGGTGGTGAGTTGCGAAAATGGAAGGGAAGAAAAACGTGCCTTGAGGTGGGGCCACGGAATGGAAAAAGTGGCTGTATGATTGTGGGCTTTGATGATGGGCAGGAATTGCTTGAAACTAACTGCTATTTGTAAGGAAGTTAAAGGTGAAAGGGCCCAAAAGCTAGATTGGGGGCCTAGCCCATTAGAGGAGGAGAGTTTCACAGGTAAACAATTGGAGAAATGCAAATGTTTAGCTGTGACCATGTGTTTGGTGGGAAGAGGAGGATTCAAGAATATTGGGCTGCTTTAGGAGCTGAAGAAAGATGATTCTGGGCTATGGGCTGAAGTTAAGGGAATTAAATGGAGCCAAGAACTTTCCAAAGCTGAAGAGAAGATTTTTTTTTTTTTTTCAAGATTGAAGAGCAGACTACTGCTAGGGTTCTGTGTTATTCATAATAATAATAATAATAATAATAATAATAAAAAAGAAAGGAAAAGGTTCCCAATTTTGTGGTCATGTTTGTAAGCACACCCTAAGGACAAGGTGTCTTTAATAGGCAGAGTAGTGTTAGGTGCCGAGATAATTAGTATGGGGTTAGGGGTATAAGGGTAATTAGATAAAGAGTTAGTTACTAGTAGTCAGTTACTATATGTGGTTATAAATAAAAGTAAGGTGAGTGAGTGTGGGGAGGTGATTGTATGGAGTGATCTAAGGCTTGGGTGAAAAAGCACTCAAGAGGGAGGTTCCAAGTTCCTTTATACTTGGATTATATTGGTCTTCTTTAATTCTCAATATATTTCAGATCTTGATTCTTGTTAGGAAGTGTCCCAACAGTATTCTAACATCCTAGTGATATTAAGTTTAGTAAATAGTGCAAAGGTTTATTCCATGAGCTAACTCTCCACACTATAGAGGCTGAAGGTGAAGTGGGGATCATCACTTGAGTAACGCATCAATTATTTGAGAGACCCCTTGAGGTTGCTCACTTGATGGTGTCTAGCAACTGCTGGACTCACTTGGCATCACTTTGAAAATGCTTTACCCACTTATGTTATTTTTAATATTGGAACTTGGACATAAAAATCTTATCCAAAAAATCTTGGACATAATAAGATCAAAGGGTTTTTGGGTAAAACGAAAAGCAAGGTCATCTTATGATTCTTTGAAATAATAGACTTATATATGCACTGACATATGTCACGAACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATAAGAACTTGATTAGCAAAATATATCAAATATTAATTAAATCGTCATTTTATGAGTGTCAAGAAGAAGTTACATTTCACAAGAAGTATTAATTAAGTTGTCATTTTCTAAGTGTCAAGTAGACACTTGACAATTTAAATGAGTCAACAAATTTCATTTACTTGACATTTTTAACATATCGAGTAAATAACACTTGACGTTTTCACTCAGTCAAAAATATTTCTCTTATTCTTAATGTTGGATCACTTGACATTTTTAATAACGTCAAATACATTGATAATTAACTTAGAAAAATGTTAAGTAATACAATTTTTGTAGTAAATTAATTCATAAACAAATTTAAAAATAATAATCGAAGATGTTAAGGAAAAAAATGATCTAAGATATATATTTCTAATTCTTGTTTAAAAAACTAGGACCACTATTTTGAGTTATTTTTAAATTAACAACTCCAACTCCAACTCTTTGTTTACCATACAAGTTTTCAATTTAGTCAATTATTAATTTTGACAACATATTAATTATTTATTTAAGAAAAAAGAATTAAAAAATATTAAAATTCCGTTGCCGGGACTTGAACCCGGGTCTCTCGGGTGAGAGCCGAGTATCCTAACCAACTAGACTACAACGGATTTTGAATTTCAAAGTCATAATTATGAAATAAATAAGATAACAAATTCCGATGGTTTTATATACTCCCAACCACACAATTTTTTCTTTAATCCATCAAATCCACATTACTTATTTTCGAGCTTTTTTTCAATACAAGAAAATTCGAATCACCAACCAACCTCTTAATAGTTAACACATTCGGGCCGGTTGACGAGTAACTTTCAGTATTATAAAATTGCAATGGTAATTGGAGTGAAATTACCAAAACAAGCCTCTACTCTCTTTGCAAAACCGCCAAAGATGAGAGACCATCATTCTCTCTTTTACCCTAAAAAAAAAACCCAAAACTTCCTTTTCATCGGCGATCACCATTGCCGGAAAATCAAATCAAATCAAATCAACCAATCAATCAATCAATCTCCGGGATTCGCAGCAAAATACGCCAAAACTCCAACAAACGGCGCATTAATGTAAGTAGTCGGCTCCGATTTCCGGAAATCCGCTCGATCGTCCTCATATACATCGTCTTCCCCAGGGCCACCGACTAGGGCTCCAACCAATACATTAGGGTTGGGATCCGCGGAATTGAAGTAGGCCGANGGCAATGATTGCTTTCATTTTCTCATGATGTGATTGTTCAGGAGTTAAATATACTTGGTGCGTGTATTTTTTAAGAAAGAAGTATATTTACACATGTTCCTCTTCCATAATTCTTTTCTTTCCATTAGGGTTAGGGTGTTCTAATAGTACGCAGCTGCTTTGAAAACACTATTTTTTTTTCAGGTTGAAGAGTTGTATTCGTTGGACCTCCACTCTCTTAACAATATGAGGTATGTATGGTGTTCAATTTTTGTGTGACATTTTGTAAATAAGACAAATGTATTTTAATCTATTCCATCTTCAGGCCTATATATGGGTTGATATTTCTATTCAAATGGCGTCCAGGGGACAAAGATGATCGTCTTGTTATTAAGGATCCCAACCCAAATCTATTTTTTGCGAGTCAGGTCAGCTTTATGATAGTGAACATGGAAGGCCATCACTTTTCAAGTGATAAATAGGAATGTATAGCTTATTTTGATGGGTTTTTCTTACTTCCTCTACTTTTCCGTGTCACAGGTAATTAACAATGCTTGTGCAACTCAAGCAATCTTGTCTATTCTGATGAATTGTCCTGATATTGACATTGGCCCAGAATTATCCAAGTTGAAGGATTTTACTAAGAACTTCCCACCTGAACTCAAAGGTTTGGCTATTAATAATAGCGAAGCTATACGTACGGCCCACAATAGTTTTGCAAGGCCAGAACCCTTCGTTCCTGACGAGCAAAAAGCTTCTAGCAAGGATGATGATGTGTACCATTTTATAAGCTACTTACCTATCGATGGGGTACTTTATGAACTTGATGGATTAAAGGATGGACCTATTAGCCATGGCCCTTGCCCAGGCAGCCAAGGTGACCTTGAGTGGCTGAAGATGGTTCAACCTGTGATTCAAGAACGCATTGAAAGGTACTCAAAGAGTGAGATAAGATTCAATCTCATGGCCATAATTAAGAATAGAAAAGAGATGTATACTGCAGAGCTTAAGGAGCTCCAAAAGAAGAGAGAGCGCATTTTGCAGCAGTTGGCTGCCTTGCAATCAGAAACATTGTTGGAAAATAGCAATAATGAGTTTCTAAACAAATCGCTATCGGAAGTAAATGCTGGGATTGAGAGTGCTACAGAGAAAATTTTGATGGAAGAAGAAAAACTCAAGAAGTGGAGAACTGAAAATATCAGAAGAAAACACAATTACATACCCTTTTTGTTCAACTTCCTGAAGATTCTTGCGGAAAAGAAACAGTTGAAACCCCTTATCGAGAAGGCTAAGCAGAAGACTGGTGGCCCCAGGTGAAGTTGGCTTCTGGGTTGGGTTATTGTTGTATTATCGTTGATATGTAGTTTACCTTTTTGGTCGACTTACCTTACTTAATAGATTATCTAATCGCGTTCAACTCCTTGTCTCTGGTGTCACTGTGCACAAGGATCTTTTTATTTTTTATTTTTCTCTTTAATGTACACTTGATGATCTTCATGTTTGAACTCTGGTGGAAAAAAGAAAGGACTACACTCCATGTTCATGTTTTTATTGGGCTAATTTATATTTAAAAGAATACCTTACCTTTA ATGGGATGGCGAAGAGTTCGGCGGACAACAGTGGAAGAAGATGGCAGAAGGACGATGAGGTTGGAGGCGTTGGAAGTAGAGGTCGAGGCTGAGCATCGGTGGCTGGAAAAGCAATTTTGGGGAAGCGGCGAATTATGTGAAGAGATGGGTAAAGGAACTGATGCGCACGTGAAATTTCAAAAGGTGGGGCCAATGATGTGGCAAAAAACTGATAGGAAAGAGGAAGAGGGTGTTAAAGGTGAAAGGGCCCAAAAGCTAGATTGGGGGCCTAGCCCATTAGAGGAGGAGAGTTTCACAGGAGTTAAATATACTTGGTGCTACGCAGCTGCTTTGAAAACACTATTTTTTTTTCAGGTTGAAGAGTTGTATTCGTTGGACCTCCACTCTCTTAACAATATGAGGCCTATATATGGGTTGATATTTCTATTCAAATGGCGTCCAGGGGACAAAGATGATCGTCTTGTTATTAAGGATCCCAACCCAAATCTATTTTTTGCGAGTCAGGTAATTAACAATGCTTGTGCAACTCAAGCAATCTTGTCTATTCTGATGAATTGTCCTGATATTGACATTGGCCCAGAATTATCCAAGTTGAAGGATTTTACTAAGAACTTCCCACCTGAACTCAAAGGTTTGGCTATTAATAATAGCGAAGCTATACGTACGGCCCACAATAGTTTTGCAAGGCCAGAACCCTTCGTTCCTGACGAGCAAAAAGCTTCTAGCAAGGATGATGATGTGTACCATTTTATAAGCTACTTACCTATCGATGGGGTACTTTATGAACTTGATGGATTAAAGGATGGACCTATTAGCCATGGCCCTTGCCCAGGCAGCCAAGGTGACCTTGAGTGGCTGAAGATGGTTCAACCTGTGATTCAAGAACGCATTGAAAGGTACTCAAAGAGTGAGATAAGATTCAATCTCATGGCCATAATTAAGAATAGAAAAGAGATGTATACTGCAGAGCTTAAGGAGCTCCAAAAGAAGAGAGAGCGCATTTTGCAGCAGTTGGCTGCCTTGCAATCAGAAACATTGTTGGAAAATAGCAATAATGAGTTTCTAAACAAATCGCTATCGGAAGTAAATGCTGGGATTGAGAGTGCTACAGAGAAAATTTTGATGGAAGAAGAAAAACTCAAGAAGTGGAGAACTGAAAATATCAGAAGAAAACACAATTACATACCCTTTTTGTTCAACTTCCTGAAGATTCTTGCGGAAAAGAAACAGTTGAAACCCCTTATCGAGAAGGCTAAGCAGAAGACTGGTGGCCCCAGGTGAAGTTGGCTTCTGGGTTGGGTTATTGTTGTATTATCGTTGATATGTAGTTTACCTTTTTGGTCGACTTACCTTACTTAATAGATTATCTAATCGCGTTCAACTCCTTGTCTCTGGTGTCACTGTGCACAAGGATCTTTTTATTTTTTATTTTTCTCTTTAATGTACACTTGATGATCTTCATGTTTGAACTCTGGTGGAAAAAAGAAAGGACTACACTCCATGTTCATGTTTTTATTGGGCTAATTTATATTTAAAAGAATACCTTACCTTTA ATGGGATGGCGAAGAGTTCGGCGGACAACAGTGGAAGAAGATGGCAGAAGGACGATGAGGTTGGAGGCGTTGGAAGTAGAGGTCGAGGCTGAGCATCGGTGGCTGGAAAAGCAATTTTGGGGAAGCGGCGAATTATGTGAAGAGATGGGTAAAGGAACTGATGCGCACGTGAAATTTCAAAAGGTGGGGCCAATGATGTGGCAAAAAACTGATAGGAAAGAGGAAGAGGGTGTTAAAGGTGAAAGGGCCCAAAAGCTAGATTGGGGGCCTAGCCCATTAGAGGAGGAGAGTTTCACAGGAGTTAAATATACTTGGTGCTACGCAGCTGCTTTGAAAACACTATTTTTTTTTCAGGTTGAAGAGTTGTATTCGTTGGACCTCCACTCTCTTAACAATATGAGGCCTATATATGGGTTGATATTTCTATTCAAATGGCGTCCAGGGGACAAAGATGATCGTCTTGTTATTAAGGATCCCAACCCAAATCTATTTTTTGCGAGTCAGGTAATTAACAATGCTTGTGCAACTCAAGCAATCTTGTCTATTCTGATGAATTGTCCTGATATTGACATTGGCCCAGAATTATCCAAGTTGAAGGATTTTACTAAGAACTTCCCACCTGAACTCAAAGGTTTGGCTATTAATAATAGCGAAGCTATACGTACGGCCCACAATAGTTTTGCAAGGCCAGAACCCTTCGTTCCTGACGAGCAAAAAGCTTCTAGCAAGGATGATGATGTGTACCATTTTATAAGCTACTTACCTATCGATGGGGTACTTTATGAACTTGATGGATTAAAGGATGGACCTATTAGCCATGGCCCTTGCCCAGGCAGCCAAGGTGACCTTGAGTGGCTGAAGATGGTTCAACCTGTGATTCAAGAACGCATTGAAAGGTACTCAAAGAGTGAGATAAGATTCAATCTCATGGCCATAATTAAGAATAGAAAAGAGATGTATACTGCAGAGCTTAAGGAGCTCCAAAAGAAGAGAGAGCGCATTTTGCAGCAGTTGGCTGCCTTGCAATCAGAAACATTGTTGGAAAATAGCAATAATGAGTTTCTAAACAAATCGCTATCGGAAGTAAATGCTGGGATTGAGAGTGCTACAGAGAAAATTTTGATGGAAGAAGAAAAACTCAAGAAGTGGAGAACTGAAAATATCAGAAGAAAACACAATTACATACCCTTTTTGTTCAACTTCCTGAAGATTCTTGCGGAAAAGAAACAGTTGAAACCCCTTATCGAGAAGGCTAAGCAGAAGACTGGTGGCCCCAGGTGA MGWRRVRRTTVEEDGRRTMRLEALEVEVEAEHRWLEKQFWGSGELCEEMGKGTDAHVKFQKVGPMMWQKTDRKEEEGVKGERAQKLDWGPSPLEEESFTGVKYTWCYAAALKTLFFFQVEELYSLDLHSLNNMRPIYGLIFLFKWRPGDKDDRLVIKDPNPNLFFASQVINNACATQAILSILMNCPDIDIGPELSKLKDFTKNFPPELKGLAINNSEAIRTAHNSFARPEPFVPDEQKASSKDDDVYHFISYLPIDGVLYELDGLKDGPISHGPCPGSQGDLEWLKMVQPVIQERIERYSKSEIRFNLMAIIKNRKEMYTAELKELQKKRERILQQLAALQSETLLENSNNEFLNKSLSEVNAGIESATEKILMEEEKLKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTGGPR
BLAST of ClCG08G000050 vs. Swiss-Prot
Match: UCH2_ARATH (Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana GN=UCH2 PE=1 SV=1) HSP 1 Score: 471.1 bits (1211), Expect = 1.3e-131 Identity = 229/306 (74.84%), Postives = 271/306 (88.56%), Query Frame = 1
BLAST of ClCG08G000050 vs. Swiss-Prot
Match: UCH1_ARATH (Ubiquitin carboxyl-terminal hydrolase OS=Arabidopsis thaliana GN=UCH1 PE=1 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 7.9e-121 Identity = 209/306 (68.30%), Postives = 258/306 (84.31%), Query Frame = 1
BLAST of ClCG08G000050 vs. Swiss-Prot
Match: UCHL5_HUMAN (Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Homo sapiens GN=UCHL5 PE=1 SV=3) HSP 1 Score: 283.5 bits (724), Expect = 3.8e-75 Identity = 151/309 (48.87%), Postives = 217/309 (70.23%), Query Frame = 1
BLAST of ClCG08G000050 vs. Swiss-Prot
Match: UCHL5_PIG (Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Sus scrofa GN=UCHL5 PE=2 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 1.5e-74 Identity = 150/309 (48.54%), Postives = 217/309 (70.23%), Query Frame = 1
BLAST of ClCG08G000050 vs. Swiss-Prot
Match: UCHL5_BOVIN (Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Bos taurus GN=UCHL5 PE=2 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 4.2e-74 Identity = 147/309 (47.57%), Postives = 215/309 (69.58%), Query Frame = 1
BLAST of ClCG08G000050 vs. TrEMBL
Match: A0A0A0KSX7_CUCSA (Ubiquitin carboxyl-terminal hydrolase OS=Cucumis sativus GN=Csa_5G652300 PE=3 SV=1) HSP 1 Score: 584.3 bits (1505), Expect = 1.2e-163 Identity = 289/294 (98.30%), Postives = 292/294 (99.32%), Query Frame = 1
BLAST of ClCG08G000050 vs. TrEMBL
Match: M5XX13_PRUPE (Ubiquitin carboxyl-terminal hydrolase OS=Prunus persica GN=PRUPE_ppa008376mg PE=3 SV=1) HSP 1 Score: 559.3 bits (1440), Expect = 4.0e-156 Identity = 272/309 (88.03%), Postives = 292/309 (94.50%), Query Frame = 1
BLAST of ClCG08G000050 vs. TrEMBL
Match: A5AU65_VITVI (Ubiquitin carboxyl-terminal hydrolase OS=Vitis vinifera GN=VIT_04s0044g02040 PE=3 SV=1) HSP 1 Score: 556.6 bits (1433), Expect = 2.6e-155 Identity = 271/309 (87.70%), Postives = 292/309 (94.50%), Query Frame = 1
BLAST of ClCG08G000050 vs. TrEMBL
Match: A0A061EW93_THECC (Ubiquitin carboxyl-terminal hydrolase OS=Theobroma cacao GN=TCM_024461 PE=3 SV=1) HSP 1 Score: 555.4 bits (1430), Expect = 5.8e-155 Identity = 271/309 (87.70%), Postives = 291/309 (94.17%), Query Frame = 1
BLAST of ClCG08G000050 vs. TrEMBL
Match: V4UD10_9ROSI (Ubiquitin carboxyl-terminal hydrolase OS=Citrus clementina GN=CICLE_v10028809mg PE=3 SV=1) HSP 1 Score: 554.7 bits (1428), Expect = 9.9e-155 Identity = 269/305 (88.20%), Postives = 292/305 (95.74%), Query Frame = 1
BLAST of ClCG08G000050 vs. TAIR10
Match: AT1G65650.1 (AT1G65650.1 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1) HSP 1 Score: 471.1 bits (1211), Expect = 7.3e-133 Identity = 229/306 (74.84%), Postives = 271/306 (88.56%), Query Frame = 1
BLAST of ClCG08G000050 vs. TAIR10
Match: AT5G16310.1 (AT5G16310.1 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1) HSP 1 Score: 435.3 bits (1118), Expect = 4.4e-122 Identity = 209/306 (68.30%), Postives = 258/306 (84.31%), Query Frame = 1
BLAST of ClCG08G000050 vs. TAIR10
Match: AT4G17510.1 (AT4G17510.1 ubiquitin C-terminal hydrolase 3) HSP 1 Score: 71.6 bits (174), Expect = 1.3e-12 Identity = 65/233 (27.90%), Postives = 100/233 (42.92%), Query Frame = 1
BLAST of ClCG08G000050 vs. NCBI nr
Match: gi|449447631|ref|XP_004141571.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like [Cucumis sativus]) HSP 1 Score: 613.6 bits (1581), Expect = 2.6e-172 Identity = 304/309 (98.38%), Postives = 307/309 (99.35%), Query Frame = 1
BLAST of ClCG08G000050 vs. NCBI nr
Match: gi|659119492|ref|XP_008459685.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like [Cucumis melo]) HSP 1 Score: 611.7 bits (1576), Expect = 9.8e-172 Identity = 306/309 (99.03%), Postives = 306/309 (99.03%), Query Frame = 1
BLAST of ClCG08G000050 vs. NCBI nr
Match: gi|700197548|gb|KGN52725.1| (hypothetical protein Csa_5G652300 [Cucumis sativus]) HSP 1 Score: 584.3 bits (1505), Expect = 1.7e-163 Identity = 289/294 (98.30%), Postives = 292/294 (99.32%), Query Frame = 1
BLAST of ClCG08G000050 vs. NCBI nr
Match: gi|596142660|ref|XP_007222561.1| (hypothetical protein PRUPE_ppa008376mg [Prunus persica]) HSP 1 Score: 559.3 bits (1440), Expect = 5.8e-156 Identity = 272/309 (88.03%), Postives = 292/309 (94.50%), Query Frame = 1
BLAST of ClCG08G000050 vs. NCBI nr
Match: gi|645228294|ref|XP_008220928.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5 [Prunus mume]) HSP 1 Score: 558.9 bits (1439), Expect = 7.6e-156 Identity = 271/309 (87.70%), Postives = 292/309 (94.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |