ClCG07G004640 (gene) Watermelon (Charleston Gray)

Overview
NameClCG07G004640
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr07 : 5971636 .. 5971884 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAAGAATTTGACAGCAGTGTGCAAAGTAATGAAAATGAAGGAGAAATTGCGGGAGTGAGTCCAATTTTGAGAGTACGTGAGGACATAATTATCTCCTCAAAGCTACTCTCTTTGAGCCTATACACAAGAAAGTTTGTTATCACCTAGGAGGATTTAATTTTAGAGTACTATCTAGTAGTACTTATCCTGATTTTTTTTCAGGATTTTAAAGCACTAATGAAGGAGCAATGTTGCCCACATGTG

mRNA sequence

ATGAAAGAAGAATTTGACAGCAGTGTGCAAAGTAATGAAAATGAAGGAGAAATTGCGGGAGTGAGTCCAATTTTGAGAGATTTTAAAGCACTAATGAAGGAGCAATGTTGCCCACATGTG

Coding sequence (CDS)

ATGAAAGAAGAATTTGACAGCAGTGTGCAAAGTAATGAAAATGAAGGAGAAATTGCGGGAGTGAGTCCAATTTTGAGAGATTTTAAAGCACTAATGAAGGAGCAATGTTGCCCACATGTG

Protein sequence

MKEEFDSSVQSNENEGEIAGVSPILRDFKALMKEQCCPHV
Homology
[Close]
BLAST of ClCG07G004640 vs. TrEMBL
Match: A0A0A0LSC1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G110870 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.7e-06
Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 1 

Query: 1  MKEEFDSSVQSNENEGEIAGVSPILRDFKALMKEQCCPHV 41
          +K+ FDSSVQ NENEGEI GVSPILR   AL+KEQC  HV
Sbjct: 34 VKKGFDSSVQCNENEGEIEGVSPILRVRLALVKEQCYSHV 73

[Close]
BLAST of ClCG07G004640 vs. NCBI nr
Match: gi|700209719|gb|KGN64815.1| (hypothetical protein Csa_1G110870 [Cucumis sativus])

HSP 1 Score: 57.4 bits (137), Expect = 6.7e-06
Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 1 

Query: 1  MKEEFDSSVQSNENEGEIAGVSPILRDFKALMKEQCCPHV 41
          +K+ FDSSVQ NENEGEI GVSPILR   AL+KEQC  HV
Sbjct: 34 VKKGFDSSVQCNENEGEIEGVSPILRVRLALVKEQCYSHV 73

The following BLAST results are available for this feature:
BLAST of ClCG07G004640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSC1_CUCSA4.7e-0672.50Uncharacterized protein OS=Cucumis sativus GN=Csa_1G110870 PE=4 SV=1[more]
BLAST of ClCG07G004640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209719|gb|KGN64815.1|6.7e-0672.50hypothetical protein Csa_1G110870 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG07G004640.1ClCG07G004640.1mRNA