ClCG07G002310 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGAATCGGGCGCTTTTTAATATTTTATTTGATTTTTCTATTTGGATTTAGTGCTTCTTTCATATTCGTCGCCGTCCTTCGCTCCATTTGCTTCCCTTCTCCCCCGCCATTGATGATTCCTTGCACTGTCTATGTTTCGGATTGAAATCGAGTGTATTTTTGTATGAATTTATATTCTTCAGTAATTTTATTCAATAAACATCTTTGAATTGAAGTGTAATTGGTTTGATTAATGCAAGTATTTTGTATTTGGGAAGAGGATCGAGGAATATAATCAATACGCAAAGCCTCGAGGTCATTGATGTTTAAAGTGTGATTGCATTGGACATTCCTGTGTTTAGAAGTAGATCGAGGTTCCAATTGAAGTCAAGGTGTGTTTCTGTGTTAAATTCGTTGGCTCTGGATTATTTATTCAGTTAACATCCTTGCATTTGAAGTGTAATTGAATTGAATGTATCTGTGTTGGGAAGAAGAGCGAGGATCATTAATGAGAGGCGAGTAGGGAGAGACTGAAATTAGAGGAAGAAGAAGAAAAATGGTGAAGTTTCGATGAGTGGAAACTTCGATCCTGTAGAAAATGGAGCGAAATTACCCGTATGAGAATGGAGTGATGATGACGAGAGACCCGAAACCAAGGCTGAGATGGACTGCTGATCTTCACGACCGTTTTGTAGACGCGGTCACCAAGCTTGGTGGCCCTGAAAGTAAGTTCGTATTCATCATTCTTATGGTTCGTTGATGTATTTTGCAATATTTGTTTGAATGATGATCTTGAACATTAATAGCAACATTTGTTGAACTTGTTCTGTGATCTTGCTGAGACTGAGAGATATTAGCGATTTTCTAGGCGAGTCCTTCCAACTGTATCGGATATGGATAACTGATTATTGTTATGGGAAATGAAGAAGTTATTAAATTATGTTGGTGGGTGACAGGACACATAATTTAAATTCATTTAGCCGTTTTCTTCTTGATGAGCTTCTGGGATGCATTATATAATCAGTTGTTAGATCAGCATTCTCATTTAGATGCTGTCCATAGCCATACTGTGGTCAACTGTCTAGTTGGTAGTTCCTTTTCCTTCTATCCTTTCTCAAATCCCCAATCTTCTAGGAACGAAGCTTGAAGAGAAAGACTCTGCCCATTGGTGTTCAGTGAAAGGACCAATTCAATTAGGGGGTTTTTGGCGAAAGGCCCAATTCCCTTAGGGGTGTTGGGTGAAAGGAGTTGGGATAGTAGGAGTTGGAACCTTTGGCCAAGGAGTTGGTGGGCCCCACGAACTAAAACCATCAATTTTATGCCTTATTAACTCCATGGGCCCAAGAGTTCACAATTCTCTAAACTTCACAATGCCCCTTTAATGCTTCTCTAGACATTCACATCTATCCATGGGACGTGGGAAATAGATAGTTAAATTTAGTAGTCGAATTAAGAAATATAACTTTATGCAAATAACAATACTTCATACTTGTATAATATAGCTAGCCTTTATATCTGAACTCTTTTTTCTTCCTAGCAATGAATTACAATAATTTAAGCTATTAGAGCGGCACTGTCTTTTCCAGAAGCAACTCCCAAGTCTGTCTTAAGATTGATGGGTTTAAAGGGCTTGACTTTGTACCACTTGAAGAGCCATTTGCAGGTAAATGTCGAAATCACTGCTTCATGATATCTCATTTGTGTCATCACTGATTGCATAGGGATAAAATATTAACATAACTTTTTAACCTTCAGAAATATAGACTTGGACTGCAAACTCGAAAGCAAAATGTGGCTGAGCAAAAGAATGAAAGCAGTGGTAAGTCTATCTGGACGTAGGACAATATGTAAGGACCTCTTGTTGATTGCATTTGCAAATATTACCCCAAATTTCTAACGACGGTGTGAATTTCTTGAGTAGATTTGATAAGTATTCATGTACTTGTTTTTCTTTTTTATTAGGAAGGCCAAATAACTCATATAGTATTTTATATTTTGATATTGTTTCAAAATCTGAAATTTCATAGATCTCATATGATAACCATTTGGTTTTTGTTTTTGTTTTTGATTTTTGAAAATTGTGCTTGTTTTCTCCTTGTTTCTTCCTCATGTTATCATATTTCCCAAGTAAATATTTGAATTCTTAAGCCAAATTCCAAAAAAGAAAAAAGAAAAGAAAAAGAAAAAAAGAAAAACATACTTTTTAAAAACTACTCTTTCCTTTTTTCCAAAATTCGGTTTGGTTTTTGTAAACACTCACGGTGAAAGTAGTGTTATAAGCTTAATTTTTCAAAGACAAGAAATAAAAAAATAAAATGATTATCAAATGGGCCTTACTTATCAATTAGTATGTTATTCTTCTGAGCATTCATATTTTACTAGTCACTATCTATCTGGTTTTGATTCATACATTCCTCTTGTCTGCATCTCAGTGTTCACCTCTAGAAAGCTCATTTAGACGTTTTAATATGAACTTTTTCAGGGACTCTTAGCAATTTCACCGGTGTAGAGGAAGATGACAGGTTTGTCTTGTTGTATCTCATCAAAATAAAATGTGCAATTATGCTCTAATTTTCTCTGTTTTACTGTCATTTCAATGGCTTCAATGGTATTTTTGCGAACATATAAGTTAGCACAATACTGATTTTCTGATTCTCTTATTGTCGATACAAAAATTAAATCGTTAAGAAAACTAATTTTCTCTGTTACTGTCATTCCAATGGCTTCAGTGGTATTTTTGCAAACATATAAGTTAGCATAATGCTGATTTTCTGATTCTCTTATTGTCGATACAAAAATTAAATCATTAAGAAAATTAAGCTTCTTGTTACGTAAGGTTTTTTTCTTTCATAAATTCGAAGTTCTTTTACTAGGTAAAATTAAGATAAAGAGAACAAAAGGAGGCAAACAACCTTGACACTGAGATTATCTATTGCATTATAGTATTCCATTTTATATTTAAGTTTATGAACCGTAATTTTAGCATATGGTTTAACTTGAACAGAGGGATGCAAATTGCCGAGGCTCTAAAATCACATGTCGAAGTGCAGAAAACAATACTAGAACAACTAGAGGTACATCTTGCTTAATTCTTCTAATAATAACAAATTCAATCTCAACTTTTTTTTATCAATTTTCATTTTATTGGCTCTTGTAAAGACAGGTACAAAATAAACTACAAATGAGAATAGAGGCTCAAGGAAAATACTTGCAAGATATCTTAGAGAAAGCACAAAAGAGTCTGGCACTCGCCATTGGCAGTAACCTTGGTAGTATTGAAAGCACAGGAATGCAGTTAATGAACTTTGATGCGGCTCTGTCAGATCAAATTGAAAAATTTAAGAAACAAGAAATGAGAGGAGGCATAGCAGACGTAAATGGTGTTTGTAAGAAGACCAATGATTCACTCATCCAGATATGCAAAGTGGAGGCTGGAGAAGAAGCTACAATAAACGAGTTTAATGTTGAAAAGAATATGATCAACTTTGATTTGAATTCCAAAGGCGGCTATGATTACAGTGCAAATGCGGCTGAAATACTTGACGCCAAAGTACTTCCTTGTTCAAGGTAATGCTGGTGCTATAAAGTATTACTTCAGTGACATGTGCATTATTACATGTAATAGTAGATTATTTTTGGGAGGGAATAAGTAACTTCCATATAGCTCATTCCATATATTCATGCTTTCATGCCCCTAAATTCCAAGGTTTTTTTTCCCTCACCAAAATGTCAAAATAGACTTTAGTTCTTCTAATCTGTTTTAAACATAACTTTCTTATAGTAATAGACTAATAGTTCAGAATGAGTTCAAGCTCAATCTAGAGAAAATATTTGGGATATTGTTTCAGCTGTGGGGAAGAAATTGACAACTGTATGTTTGTTTGCCTTGTATTGCATGTATACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTGCTAACTTGCTAAATAAGTTCATAACCTCTACTTTGCCGTCCTCATAAAAACATCTTCAGGTAATCATCCATGGGAGTGCAGTTCATTTCTTATTCCAGAGTTTGTCAAGCAACCATTGAAGAATATGTGATAAATTGTTTCACTCCAGCCAGCTATGCCAAGTCCCTATCAGCATTTGCCACTTGCCTCTATTCACATATGAATGAGGAATTTCAGAAGGTTGAAATACCATAA AGAATCGGGCGCTTTTTAATATTTTATTTGATTTTTCTATTTGGATTTAGTGCTTCTTTCATATTCGTCGCCGTCCTTCGCTCCATTTGCTTCCCTTCTCCCCCGCCATTGATGATTCCTTGCACTGTCTATGTTTCGGATTGAAATCGAGTGTATTTTTAGGATCGAGGAATATAATCAATACGCAAAGCCTCGAGGTCATTGATGTTTAAAGTGTGATTGCATTGGACATTCCTGTGTTTAGAAGTAGATCGAGGTTCCAATTGAAGTCAAGAGCGAGGATCATTAATGAGAGGCGAGTAGGGAGAGACTGAAATTAGAGGAAGAAGAAGAAAAATGGTGAAGTTTCGATGAGTGGAAACTTCGATCCTGTAGAAAATGGAGCGAAATTACCCGTATGAGAATGGAGTGATGATGACGAGAGACCCGAAACCAAGGCTGAGATGGACTGCTGATCTTCACGACCGTTTTGTAGACGCGGTCACCAAGCTTGGTGGCCCTGAAAAAGCAACTCCCAAGTCTGTCTTAAGATTGATGGGTTTAAAGGGCTTGACTTTGTACCACTTGAAGAGCCATTTGCAGAAATATAGACTTGGACTGCAAACTCGAAAGCAAAATGTGGCTGAGCAAAAGAATGAAAGCAGTGGGACTCTTAGCAATTTCACCGGTGTAGAGGAAGATGACAGAGGGATGCAAATTGCCGAGGCTCTAAAATCACATGTCGAAGTGCAGAAAACAATACTAGAACAACTAGAGGTACAAAATAAACTACAAATGAGAATAGAGGCTCAAGGAAAATACTTGCAAGATATCTTAGAGAAAGCACAAAAGAGTCTGGCACTCGCCATTGGCAGTAACCTTGGTAGTATTGAAAGCACAGGAATGCAGTTAATGAACTTTGATGCGGCTCTGTCAGATCAAATTGAAAAATTTAAGAAACAAGAAATGAGAGGAGGCATAGCAGACGTAAATGGTGTTTGTAAGAAGACCAATGATTCACTCATCCAGATATGCAAAGTGGAGGCTGGAGAAGAAGCTACAATAAACGAGTTTAATGTTGAAAAGAATATGATCAACTTTGATTTGAATTCCAAAGGCGGCTATGATTACAGTGCAAATGCGGCTGAAATACTTGACGCCAAAGTACTTCCTTGTTCAAGAGTTTGTCAAGCAACCATTGAAGAATATGTGATAAATTGTTTCACTCCAGCCAGCTATGCCAAGTCCCTATCAGCATTTGCCACTTGCCTCTATTCACATATGAATGAGGAATTTCAGAAGGTTGAAATACCATAA ATGGAGCGAAATTACCCGTATGAGAATGGAGTGATGATGACGAGAGACCCGAAACCAAGGCTGAGATGGACTGCTGATCTTCACGACCGTTTTGTAGACGCGGTCACCAAGCTTGGTGGCCCTGAAAAAGCAACTCCCAAGTCTGTCTTAAGATTGATGGGTTTAAAGGGCTTGACTTTGTACCACTTGAAGAGCCATTTGCAGAAATATAGACTTGGACTGCAAACTCGAAAGCAAAATGTGGCTGAGCAAAAGAATGAAAGCAGTGGGACTCTTAGCAATTTCACCGGTGTAGAGGAAGATGACAGAGGGATGCAAATTGCCGAGGCTCTAAAATCACATGTCGAAGTGCAGAAAACAATACTAGAACAACTAGAGGTACAAAATAAACTACAAATGAGAATAGAGGCTCAAGGAAAATACTTGCAAGATATCTTAGAGAAAGCACAAAAGAGTCTGGCACTCGCCATTGGCAGTAACCTTGGTAGTATTGAAAGCACAGGAATGCAGTTAATGAACTTTGATGCGGCTCTGTCAGATCAAATTGAAAAATTTAAGAAACAAGAAATGAGAGGAGGCATAGCAGACGTAAATGGTGTTTGTAAGAAGACCAATGATTCACTCATCCAGATATGCAAAGTGGAGGCTGGAGAAGAAGCTACAATAAACGAGTTTAATGTTGAAAAGAATATGATCAACTTTGATTTGAATTCCAAAGGCGGCTATGATTACAGTGCAAATGCGGCTGAAATACTTGACGCCAAAGTACTTCCTTGTTCAAGAGTTTGTCAAGCAACCATTGAAGAATATGTGATAAATTGTTTCACTCCAGCCAGCTATGCCAAGTCCCTATCAGCATTTGCCACTTGCCTCTATTCACATATGAATGAGGAATTTCAGAAGGTTGAAATACCATAA MERNYPYENGVMMTRDPKPRLRWTADLHDRFVDAVTKLGGPEKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGLQTRKQNVAEQKNESSGTLSNFTGVEEDDRGMQIAEALKSHVEVQKTILEQLEVQNKLQMRIEAQGKYLQDILEKAQKSLALAIGSNLGSIESTGMQLMNFDAALSDQIEKFKKQEMRGGIADVNGVCKKTNDSLIQICKVEAGEEATINEFNVEKNMINFDLNSKGGYDYSANAAEILDAKVLPCSRVCQATIEEYVINCFTPASYAKSLSAFATCLYSHMNEEFQKVEIP
BLAST of ClCG07G002310 vs. Swiss-Prot
Match: PHLB_ARATH (Myb family transcription factor PHL11 OS=Arabidopsis thaliana GN=PHL11 PE=2 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 3.2e-55 Identity = 129/258 (50.00%), Postives = 158/258 (61.24%), Query Frame = 1
BLAST of ClCG07G002310 vs. Swiss-Prot
Match: PHL3_ARATH (Protein PHR1-LIKE 3 OS=Arabidopsis thaliana GN=PHL3 PE=1 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 5.6e-44 Identity = 89/160 (55.62%), Postives = 118/160 (73.75%), Query Frame = 1
BLAST of ClCG07G002310 vs. Swiss-Prot
Match: PHL2_ARATH (Protein PHR1-LIKE 2 OS=Arabidopsis thaliana GN=PHL2 PE=1 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 2.1e-43 Identity = 89/159 (55.97%), Postives = 115/159 (72.33%), Query Frame = 1
BLAST of ClCG07G002310 vs. Swiss-Prot
Match: APL_ARATH (Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL PE=1 SV=2) HSP 1 Score: 160.6 bits (405), Expect = 2.7e-38 Identity = 82/157 (52.23%), Postives = 109/157 (69.43%), Query Frame = 1
BLAST of ClCG07G002310 vs. Swiss-Prot
Match: PHL9_ARATH (Myb-related protein 2 OS=Arabidopsis thaliana GN=MYR2 PE=1 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 7.8e-38 Identity = 89/196 (45.41%), Postives = 124/196 (63.27%), Query Frame = 1
BLAST of ClCG07G002310 vs. TrEMBL
Match: A0A0A0LCI1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G637990 PE=4 SV=1) HSP 1 Score: 466.8 bits (1200), Expect = 2.0e-128 Identity = 238/262 (90.84%), Postives = 249/262 (95.04%), Query Frame = 1
BLAST of ClCG07G002310 vs. TrEMBL
Match: W9S599_9ROSA (Myb family transcription factor APL OS=Morus notabilis GN=L484_022829 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 9.2e-70 Identity = 149/275 (54.18%), Postives = 190/275 (69.09%), Query Frame = 1
BLAST of ClCG07G002310 vs. TrEMBL
Match: U5GR40_POPTR (Myb family transcription factor family protein OS=Populus trichocarpa GN=POPTR_0001s01560g PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 1.6e-69 Identity = 150/260 (57.69%), Postives = 183/260 (70.38%), Query Frame = 1
BLAST of ClCG07G002310 vs. TrEMBL
Match: A0A0D2S1M8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G180000 PE=4 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.6e-66 Identity = 148/256 (57.81%), Postives = 175/256 (68.36%), Query Frame = 1
BLAST of ClCG07G002310 vs. TrEMBL
Match: A0A0D2R6R8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G180000 PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 2.1e-66 Identity = 148/257 (57.59%), Postives = 175/257 (68.09%), Query Frame = 1
BLAST of ClCG07G002310 vs. TAIR10
Match: AT5G45580.1 (AT5G45580.1 Homeodomain-like superfamily protein) HSP 1 Score: 211.8 bits (538), Expect = 5.7e-55 Identity = 125/252 (49.60%), Postives = 153/252 (60.71%), Query Frame = 1
BLAST of ClCG07G002310 vs. TAIR10
Match: AT4G13640.2 (AT4G13640.2 Homeodomain-like superfamily protein) HSP 1 Score: 174.1 bits (440), Expect = 1.3e-43 Identity = 89/163 (54.60%), Postives = 118/163 (72.39%), Query Frame = 1
BLAST of ClCG07G002310 vs. TAIR10
Match: AT3G24120.2 (AT3G24120.2 Homeodomain-like superfamily protein) HSP 1 Score: 172.2 bits (435), Expect = 5.0e-43 Identity = 89/162 (54.94%), Postives = 115/162 (70.99%), Query Frame = 1
BLAST of ClCG07G002310 vs. TAIR10
Match: AT1G79430.2 (AT1G79430.2 Homeodomain-like superfamily protein) HSP 1 Score: 160.6 bits (405), Expect = 1.5e-39 Identity = 82/157 (52.23%), Postives = 109/157 (69.43%), Query Frame = 1
BLAST of ClCG07G002310 vs. TAIR10
Match: AT1G69580.2 (AT1G69580.2 Homeodomain-like superfamily protein) HSP 1 Score: 159.5 bits (402), Expect = 3.4e-39 Identity = 84/175 (48.00%), Postives = 114/175 (65.14%), Query Frame = 1
BLAST of ClCG07G002310 vs. NCBI nr
Match: gi|659120971|ref|XP_008460438.1| (PREDICTED: myb family transcription factor APL [Cucumis melo]) HSP 1 Score: 471.1 bits (1211), Expect = 1.5e-129 Identity = 239/261 (91.57%), Postives = 250/261 (95.79%), Query Frame = 1
BLAST of ClCG07G002310 vs. NCBI nr
Match: gi|449453324|ref|XP_004144408.1| (PREDICTED: myb family transcription factor APL [Cucumis sativus]) HSP 1 Score: 466.8 bits (1200), Expect = 2.8e-128 Identity = 238/262 (90.84%), Postives = 249/262 (95.04%), Query Frame = 1
BLAST of ClCG07G002310 vs. NCBI nr
Match: gi|1009165964|ref|XP_015901330.1| (PREDICTED: myb family transcription factor APL [Ziziphus jujuba]) HSP 1 Score: 280.4 bits (716), Expect = 3.7e-72 Identity = 155/264 (58.71%), Postives = 190/264 (71.97%), Query Frame = 1
BLAST of ClCG07G002310 vs. NCBI nr
Match: gi|743809141|ref|XP_011018441.1| (PREDICTED: myb family transcription factor APL-like [Populus euphratica]) HSP 1 Score: 273.9 bits (699), Expect = 3.5e-70 Identity = 150/272 (55.15%), Postives = 190/272 (69.85%), Query Frame = 1
BLAST of ClCG07G002310 vs. NCBI nr
Match: gi|703152469|ref|XP_010110423.1| (Myb family transcription factor APL [Morus notabilis]) HSP 1 Score: 271.9 bits (694), Expect = 1.3e-69 Identity = 149/275 (54.18%), Postives = 190/275 (69.09%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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