ClCG07G000730 (gene) Watermelon (Charleston Gray)

Overview
NameClCG07G000730
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionPR-6 proteinase inhibitor family protein
LocationCG_Chr07 : 803813 .. 804245 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATATGATTATTTATTAAGAAAAAAGACTCCCAAGAACCAAACTCGGCTATAAATACCACTAACTAATCACCAAGCATCTCATTCGATCTTCAAGAAACAAAAAGGGATTGAAGATGGCTGAAGAAATTGTTATTCCTTCAGGTTAGTAAGACTTCTCCTTCCCACTTGGGTGTTTTCAAATAATTATTTTTTGTTGTCCTTTTCAGTATTTACATTTTCACCATTCAATTTATTTAGGGAAAAATCCTCGTGGCCCGAACTCGTATTCGTCGAATCTTCCACTGCAGTACATATTATAGAGAGAGAATCCTAAAGTGAAGACAATCGTGCTATTAGCTGGATCTCCAGTTACTGAAGATTTGAGATTTGATCGAGTTCGAGTTTTTGTTAACATAAATAGTGTGGTGGTTATTATTCCTACAATTGGTTGA

mRNA sequence

ATATATGATTATTTATTAAGAAAAAAGACTCCCAAGAACCAAACTCGGCTATAAATACCACTAACTAATCACCAAGCATCTCATTCGATCTTCAAGAAACAAAAAGGGATTGAAGATGGCTGAAGAAATTGTTATTCCTTCAGGGAAAAATCCTCGTGGCCCGAACTCGTATTCGTCGAATCTTCCACTGCAAGAGAATCCTAAAGTGAAGACAATCGTGCTATTAGCTGGATCTCCAGTTACTGAAGATTTGAGATTTGATCGAGTTCGAGTTTTTGTTAACATAAATAGTGTGGTGGTTATTATTCCTACAATTGGTTGA

Coding sequence (CDS)

ATGGCTGAAGAAATTGTTATTCCTTCAGGGAAAAATCCTCGTGGCCCGAACTCGTATTCGTCGAATCTTCCACTGCAAGAGAATCCTAAAGTGAAGACAATCGTGCTATTAGCTGGATCTCCAGTTACTGAAGATTTGAGATTTGATCGAGTTCGAGTTTTTGTTAACATAAATAGTGTGGTGGTTATTATTCCTACAATTGGTTGA

Protein sequence

MAEEIVIPSGKNPRGPNSYSSNLPLQENPKVKTIVLLAGSPVTEDLRFDRVRVFVNINSVVVIIPTIG
Homology
[Close]
BLAST of ClCG07G000730 vs. Swiss-Prot
Match: HPI_HEVBR (Protease inhibitor HPI OS=Hevea brasiliensis GN=PI1 PE=1 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 8.7e-06
Identity = 24/42 (57.14%), Postives = 28/42 (66.67%), Query Frame = 1 

Query: 27 ENPKVKTIVLLAGSPVTEDLRFDRVRVFVNINSVVVIIPTIG 69
          EN  VK IV+  G P+T+DL F+RVRVFV+ N VV  +P IG
Sbjct: 29 ENANVKAIVVKEGLPITQDLNFNRVRVFVDENRVVTQVPAIG 70

[Close]
BLAST of ClCG07G000730 vs. TrEMBL
Match: A0A0A0KPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G027950 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.7e-06
Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 1 

Query: 1  MAEE-IVIPSGKNPRGP------NSYSSNLPLQENPKVKTIVLLAGSPVTEDLRFDRVRV 60
          MAEE IV PS      P      +S + +   ++ P VK +VLLAGSPVTEDLR +RVR+
Sbjct: 1  MAEEKIVFPSSGKSSWPELVFVKSSVAVHWIERDRPDVKPVVLLAGSPVTEDLRPNRVRI 60

Query: 61 FVNINSVVVIIPTIG 69
          FVN+N  VV +P  G
Sbjct: 61 FVNMNDRVVEVPRTG 75

[Close]
BLAST of ClCG07G000730 vs. TAIR10
Match: AT2G38870.1 (AT2G38870.1 Serine protease inhibitor, potato inhibitor I-type family protein)

HSP 1 Score: 49.7 bits (117), Expect = 8.4e-07
Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 1 

Query: 19 YSSNLPLQENPKVKTIVLLAGSPVTEDLRFDRVRVFVNINSVVVIIPTIG 69
          Y++ +  +ENP V   V+L GSPVT D R DRVRVFV+ N +VV  P  G
Sbjct: 21 YAAVVIERENPTVNAAVILDGSPVTADFRCDRVRVFVDGNRIVVKTPKSG 70

[Close]
BLAST of ClCG07G000730 vs. NCBI nr
Match: gi|778698123|ref|XP_011654473.1| (PREDICTED: inhibitor of trypsin and hageman factor-like [Cucumis sativus])

HSP 1 Score: 58.9 bits (141), Expect = 3.9e-06
Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 1 

Query: 1  MAEE-IVIPSGKNPRGP------NSYSSNLPLQENPKVKTIVLLAGSPVTEDLRFDRVRV 60
          MAEE IV PS      P      +S + +   ++ P VK +VLLAGSPVTEDLR +RVR+
Sbjct: 1  MAEEKIVFPSSGKSSWPELVFVKSSVAVHWIERDRPDVKPVVLLAGSPVTEDLRPNRVRI 60

Query: 61 FVNINSVVVIIPTIG 69
          FVN+N  VV +P  G
Sbjct: 61 FVNMNDRVVEVPRTG 75

The following BLAST results are available for this feature:
BLAST of ClCG07G000730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HPI_HEVBR8.7e-0657.14Protease inhibitor HPI OS=Hevea brasiliensis GN=PI1 PE=1 SV=2[more]
BLAST of ClCG07G000730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPI0_CUCSA2.7e-0649.33Uncharacterized protein OS=Cucumis sativus GN=Csa_5G027950 PE=4 SV=1[more]
BLAST of ClCG07G000730 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G38870.18.4e-0752.00 Serine protease inhibitor, potato inhibitor I-type family protein[more]
BLAST of ClCG07G000730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778698123|ref|XP_011654473.1|3.9e-0649.33PREDICTED: inhibitor of trypsin and hageman factor-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000864Prot_inh_pot1
Vocabulary: Molecular Function
TermDefinition
GO:0004867serine-type endopeptidase inhibitor activity
Vocabulary: Biological Process
TermDefinition
GO:0009611response to wounding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009611 response to wounding
cellular_component GO:0005575 cellular_component
molecular_function GO:0004867 serine-type endopeptidase inhibitor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG07G000730.1ClCG07G000730.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000864Proteinase inhibitor I13, potato inhibitor IPFAMPF00280potato_inhibitcoord: 26..68
score: 1.3
IPR000864Proteinase inhibitor I13, potato inhibitor IunknownSSF54654CI-2 family of serine protease inhibitorscoord: 25..68
score: 6.93
NoneNo IPR availableGENE3DG3DSA:3.30.10.10coord: 26..68
score: 9.0
NoneNo IPR availablePANTHERPTHR33091FAMILY NOT NAMEDcoord: 25..68
score: 2.6

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG07G000730Wax gourdwcgwgoB585
ClCG07G000730Watermelon (Charleston Gray)wcgwcgB164
ClCG07G000730Watermelon (Charleston Gray)wcgwcgB174
ClCG07G000730Cucumber (Gy14) v1cgywcgB457
ClCG07G000730Cucurbita maxima (Rimu)cmawcgB240
ClCG07G000730Cucurbita maxima (Rimu)cmawcgB467
ClCG07G000730Cucurbita maxima (Rimu)cmawcgB568
ClCG07G000730Cucurbita maxima (Rimu)cmawcgB811
ClCG07G000730Cucurbita moschata (Rifu)cmowcgB227
ClCG07G000730Cucurbita moschata (Rifu)cmowcgB466
ClCG07G000730Cucurbita moschata (Rifu)cmowcgB566
ClCG07G000730Cucurbita moschata (Rifu)cmowcgB808
ClCG07G000730Wild cucumber (PI 183967)cpiwcgB163
ClCG07G000730Wild cucumber (PI 183967)cpiwcgB264
ClCG07G000730Cucumber (Chinese Long) v2cuwcgB160
ClCG07G000730Cucumber (Chinese Long) v2cuwcgB255
ClCG07G000730Melon (DHL92) v3.5.1mewcgB402
ClCG07G000730Melon (DHL92) v3.5.1mewcgB445
ClCG07G000730Watermelon (97103) v1wcgwmB373
ClCG07G000730Watermelon (97103) v1wcgwmB382
ClCG07G000730Watermelon (97103) v1wcgwmB395
ClCG07G000730Cucurbita pepo (Zucchini)cpewcgB240
ClCG07G000730Cucurbita pepo (Zucchini)cpewcgB683
ClCG07G000730Bottle gourd (USVL1VR-Ls)lsiwcgB032
ClCG07G000730Bottle gourd (USVL1VR-Ls)lsiwcgB348
ClCG07G000730Bottle gourd (USVL1VR-Ls)lsiwcgB349
ClCG07G000730Cucumber (Gy14) v2cgybwcgB149
ClCG07G000730Cucumber (Gy14) v2cgybwcgB238
ClCG07G000730Melon (DHL92) v3.6.1medwcgB390
ClCG07G000730Melon (DHL92) v3.6.1medwcgB439
ClCG07G000730Silver-seed gourdcarwcgB0228
ClCG07G000730Silver-seed gourdcarwcgB0730
ClCG07G000730Silver-seed gourdcarwcgB0760
ClCG07G000730Cucumber (Chinese Long) v3cucwcgB168
ClCG07G000730Cucumber (Chinese Long) v3cucwcgB264
ClCG07G000730Watermelon (97103) v2wcgwmbB304
ClCG07G000730Watermelon (97103) v2wcgwmbB305
ClCG07G000730Watermelon (97103) v2wcgwmbB307