ClCG06G017650 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCTGCCAGTTTTCCCCGATGTTTCTTTCCCAATGACAATCCCTCATTGCTCCTTATATTTGATTGCTTTGTGAATTATTGTCACTACACATATGTCTGGGTATTCTCTTCTTACATTGGTCTTTTTCATTCATTTTAGGACGTGGAGCAATCTGCAACTTCAAGGTAGCTCTTTTCTCCCATAACAGCAGACGCTCTCTCCCTCTCTCAAGTTATAGCAAAGTGAAAACTCAAAGTTATCTGACATGTGGGAGTATTGATTAATCGCTATTAGTTACTTGATTCATCTGATATACTGTATCTTCTTTGTATCAGTTCACTAAAGAAGACGCAACCACACACACACACACTTACATGTATATTTAAAAGAAACACAATTCTCATTGATTAGGTGGAAAGACACTATGAAAAATGCTCTACAATTTCAAAAGATGCACCATAATTGGAAATAATACAGCAACAGTATAATTACAACAAGCCTTAGATAACTAAGATGAAGCCTAACCAAATTCATCCCGTCTCCATTCTTCCCATTGTTTTTCATTCTCATTAAATTCTTCCGCTTGTACAGCTTTCTCAGTACCAAAAATATATTAGGTAGATCACGTGAGTAATACCCATGTTGGTTACTTCTATTTTTCATTTCTCCATTAGAATGTTGATATTTCACAGAAAACTTCTTTGCATTGATCTAATCCTGAAGCTATCTCAAACAACTTTATTACTCGAAGCATAAATTTCAGTAAAAACTTTGATATCCCCACTGAAAATGATCATAAGGCCGGACAACTGAAGATGGGTTTTGAGAATTCTCCCTTAACCAGTGTGAAAACTTTCCAACAAGTCCTTTTGCATCTCTGGGCTGATCTAGCTGCTAATAAAAATTCTTATTTGTATAAACAAGGAGAAAGGGTGCTTTCTTTTAGTCCCTTGGTGCTGCCAAGAAATCAGTGTCTGAAATACATCCTGTCATCATTTCGGCCATTTACCTTCACATTCCCTTTTCTCCATCACGGCTAGTAGTTACTCCCAATCCAAGAATTGTATGCATTTTCCGAGTCAATTTTAAAAGTCTAAACTTTTCCTCAAATCTCCTCTTTTTTTCAACAATTATATTTGCATTGGCAATTGATGTGATTCCAAAGAAGTTGTGTTATTCCCCAGTTTTGCATTTCAACTTTCGTTTTAATGTATTCTCTCTCTCTCTCTCCAATGCATCTTATTTAGGTGATATCTTTTGTGCGTCTGTCATCTTAGGCAAGCAAGAAGCTCTTGCCTTGTGTGTCTTATTTTTCAAACATATATTTGACACTGCTGGCATCACTATTTAAGTTTGTTTATGTAGACCTCTTGAGCAAGACAAAGAGCATGTTGATGAAGTTCATTGTTCCAGAGAAAGAAGTAGGACAGCCTGGAATATCATTGAGGAGGTACGGACTAAACTTTCTTTACTACTTAAAGATAATGGACTCCAGCATTTGAAACAGACATGCTAACTGATGTTCTATTGTTTCTACTGCAGCATTTGCTGCCGTTTATGGAGAAAGAAAATTATCAGGTTTCAACCAAGTGTAGGCTTCATCCAAACAACGATCTCTTCAGAGATCAGGAACAGCACAAGATTCATCTTGATATAAATCATTGGCAGTGTGGATACTGTCGTAAAAGCTTTCGTGCTGAAAAATTTCTTGATAAGCATTTTGACAACAGACATAACAATCTTCTGAATGTTGTATGTTCTTCCTTCATGTTATAATCATTGTTCATAATTAAATTTTATTCTTTAAAGTTACTATATAACATGGTTATCATTTTTAGGTCATGTCTTAGTATCTGCTGTTATTTGGATTGGCCATTGCATAATACATAGGTTTGCCGTAGCAACATCTATATTTACTTGGATTTCATGTTATTGCAGGCAGTGTAG ATGGATGCTGCCAGTTTTCCCCGATGTTTCTTTCCCAATGACAATCCCTCATTGCTCCTTATATTTGATTGCTTTGTGAATTATTGTCACTACACATATGTCTGGGACGTGGAGCAATCTGCAACTTCAAGTAAAAACTTTGATATCCCCACTGAAAATGATCATAAGGCCGGACAACTGAAGATGGGTTTTGAGAATTCTCCCTTAACCAGTGTGAAAACTTTCCAACAATCCCTTGGTGCTGCCAAGAAATCAGTGTCTGAAATACATCCTGTCATCATTTCGGCCATTTACCTTCACATTCCCTTTTCTCCATCACGGCTAGTAGTTACTCCCAATCCAAGAATTAAGTTGTGTTATTCCCCAGTTTTGCATTTCAACTTTCGTTTTAATGTATTCTCTCTCTCTCTCTCCAATGCATCTTATTTAGGTGATATCTTTTGTGCGTCTGTCATCTTAGGCAAGCAAGAAGCTCTTGCCTTACCTCTTGAGCAAGACAAAGAGCATGTTGATGAAGTTCATTGTTCCAGAGAAAGAAGTAGGACAGCCTGGAATATCATTGAGGAGCATTTGCTGCCGTTTATGGAGAAAGAAAATTATCAGGTTTCAACCAAGTGTAGGCTTCATCCAAACAACGATCTCTTCAGAGATCAGGAACAGCACAAGATTCATCTTGATATAAATCATTGGCAGTGTGGATACTGTCGTAAAAGCTTTCGTGCTGAAAAATTTCTTGATAAGCATTTTGACAACAGACATAACAATCTTCTGAATGTTGTTTGCCGTAGCAACATCTATATTTACTTGGATTTCATGTTATTGCAGGCAGTGTAG ATGGATGCTGCCAGTTTTCCCCGATGTTTCTTTCCCAATGACAATCCCTCATTGCTCCTTATATTTGATTGCTTTGTGAATTATTGTCACTACACATATGTCTGGGACGTGGAGCAATCTGCAACTTCAAGTAAAAACTTTGATATCCCCACTGAAAATGATCATAAGGCCGGACAACTGAAGATGGGTTTTGAGAATTCTCCCTTAACCAGTGTGAAAACTTTCCAACAATCCCTTGGTGCTGCCAAGAAATCAGTGTCTGAAATACATCCTGTCATCATTTCGGCCATTTACCTTCACATTCCCTTTTCTCCATCACGGCTAGTAGTTACTCCCAATCCAAGAATTAAGTTGTGTTATTCCCCAGTTTTGCATTTCAACTTTCGTTTTAATGTATTCTCTCTCTCTCTCTCCAATGCATCTTATTTAGGTGATATCTTTTGTGCGTCTGTCATCTTAGGCAAGCAAGAAGCTCTTGCCTTACCTCTTGAGCAAGACAAAGAGCATGTTGATGAAGTTCATTGTTCCAGAGAAAGAAGTAGGACAGCCTGGAATATCATTGAGGAGCATTTGCTGCCGTTTATGGAGAAAGAAAATTATCAGGTTTCAACCAAGTGTAGGCTTCATCCAAACAACGATCTCTTCAGAGATCAGGAACAGCACAAGATTCATCTTGATATAAATCATTGGCAGTGTGGATACTGTCGTAAAAGCTTTCGTGCTGAAAAATTTCTTGATAAGCATTTTGACAACAGACATAACAATCTTCTGAATGTTGTTTGCCGTAGCAACATCTATATTTACTTGGATTTCATGTTATTGCAGGCAGTGTAG MDAASFPRCFFPNDNPSLLLIFDCFVNYCHYTYVWDVEQSATSSKNFDIPTENDHKAGQLKMGFENSPLTSVKTFQQSLGAAKKSVSEIHPVIISAIYLHIPFSPSRLVVTPNPRIKLCYSPVLHFNFRFNVFSLSLSNASYLGDIFCASVILGKQEALALPLEQDKEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYQVSTKCRLHPNNDLFRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHNNLLNVVCRSNIYIYLDFMLLQAV
BLAST of ClCG06G017650 vs. TrEMBL
Match: A0A0A0LU52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002750 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 7.9e-52 Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 1
BLAST of ClCG06G017650 vs. TrEMBL
Match: W9RH16_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008176 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.3e-41 Identity = 82/142 (57.75%), Postives = 106/142 (74.65%), Query Frame = 1
BLAST of ClCG06G017650 vs. TrEMBL
Match: A0A0D2PHR9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G061600 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.4e-40 Identity = 73/107 (68.22%), Postives = 92/107 (85.98%), Query Frame = 1
BLAST of ClCG06G017650 vs. TrEMBL
Match: B9RAN0_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1507400 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.4e-40 Identity = 72/96 (75.00%), Postives = 88/96 (91.67%), Query Frame = 1
BLAST of ClCG06G017650 vs. TrEMBL
Match: K4BK00_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 4.1e-40 Identity = 71/95 (74.74%), Postives = 87/95 (91.58%), Query Frame = 1
BLAST of ClCG06G017650 vs. TAIR10
Match: AT5G63280.1 (AT5G63280.1 C2H2-like zinc finger protein) HSP 1 Score: 145.2 bits (365), Expect = 6.0e-35 Identity = 62/115 (53.91%), Postives = 83/115 (72.17%), Query Frame = 1
BLAST of ClCG06G017650 vs. TAIR10
Match: AT5G40710.1 (AT5G40710.1 zinc finger (C2H2 type) family protein) HSP 1 Score: 137.9 bits (346), Expect = 9.5e-33 Identity = 54/87 (62.07%), Postives = 73/87 (83.91%), Query Frame = 1
BLAST of ClCG06G017650 vs. NCBI nr
Match: gi|449440588|ref|XP_004138066.1| (PREDICTED: uncharacterized protein LOC101218367 [Cucumis sativus]) HSP 1 Score: 212.2 bits (539), Expect = 1.1e-51 Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 1
BLAST of ClCG06G017650 vs. NCBI nr
Match: gi|659128998|ref|XP_008464477.1| (PREDICTED: uncharacterized protein LOC103502344 [Cucumis melo]) HSP 1 Score: 209.1 bits (531), Expect = 9.6e-51 Identity = 94/105 (89.52%), Postives = 100/105 (95.24%), Query Frame = 1
BLAST of ClCG06G017650 vs. NCBI nr
Match: gi|645306224|ref|XP_008246045.1| (PREDICTED: uncharacterized protein LOC103344198 [Prunus mume]) HSP 1 Score: 181.0 bits (458), Expect = 2.8e-42 Identity = 78/105 (74.29%), Postives = 94/105 (89.52%), Query Frame = 1
BLAST of ClCG06G017650 vs. NCBI nr
Match: gi|645268181|ref|XP_008239410.1| (PREDICTED: uncharacterized protein LOC103338010 isoform X2 [Prunus mume]) HSP 1 Score: 181.0 bits (458), Expect = 2.8e-42 Identity = 78/105 (74.29%), Postives = 94/105 (89.52%), Query Frame = 1
BLAST of ClCG06G017650 vs. NCBI nr
Match: gi|645268179|ref|XP_008239409.1| (PREDICTED: uncharacterized protein LOC103338010 isoform X1 [Prunus mume]) HSP 1 Score: 181.0 bits (458), Expect = 2.8e-42 Identity = 78/105 (74.29%), Postives = 94/105 (89.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |