ClCG06G017650 (gene) Watermelon (Charleston Gray)

NameClCG06G017650
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionZinc finger family protein
LocationCG_Chr06 : 30740167 .. 30742098 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCTGCCAGTTTTCCCCGATGTTTCTTTCCCAATGACAATCCCTCATTGCTCCTTATATTTGATTGCTTTGTGAATTATTGTCACTACACATATGTCTGGGTATTCTCTTCTTACATTGGTCTTTTTCATTCATTTTAGGACGTGGAGCAATCTGCAACTTCAAGGTAGCTCTTTTCTCCCATAACAGCAGACGCTCTCTCCCTCTCTCAAGTTATAGCAAAGTGAAAACTCAAAGTTATCTGACATGTGGGAGTATTGATTAATCGCTATTAGTTACTTGATTCATCTGATATACTGTATCTTCTTTGTATCAGTTCACTAAAGAAGACGCAACCACACACACACACACTTACATGTATATTTAAAAGAAACACAATTCTCATTGATTAGGTGGAAAGACACTATGAAAAATGCTCTACAATTTCAAAAGATGCACCATAATTGGAAATAATACAGCAACAGTATAATTACAACAAGCCTTAGATAACTAAGATGAAGCCTAACCAAATTCATCCCGTCTCCATTCTTCCCATTGTTTTTCATTCTCATTAAATTCTTCCGCTTGTACAGCTTTCTCAGTACCAAAAATATATTAGGTAGATCACGTGAGTAATACCCATGTTGGTTACTTCTATTTTTCATTTCTCCATTAGAATGTTGATATTTCACAGAAAACTTCTTTGCATTGATCTAATCCTGAAGCTATCTCAAACAACTTTATTACTCGAAGCATAAATTTCAGTAAAAACTTTGATATCCCCACTGAAAATGATCATAAGGCCGGACAACTGAAGATGGGTTTTGAGAATTCTCCCTTAACCAGTGTGAAAACTTTCCAACAAGTCCTTTTGCATCTCTGGGCTGATCTAGCTGCTAATAAAAATTCTTATTTGTATAAACAAGGAGAAAGGGTGCTTTCTTTTAGTCCCTTGGTGCTGCCAAGAAATCAGTGTCTGAAATACATCCTGTCATCATTTCGGCCATTTACCTTCACATTCCCTTTTCTCCATCACGGCTAGTAGTTACTCCCAATCCAAGAATTGTATGCATTTTCCGAGTCAATTTTAAAAGTCTAAACTTTTCCTCAAATCTCCTCTTTTTTTCAACAATTATATTTGCATTGGCAATTGATGTGATTCCAAAGAAGTTGTGTTATTCCCCAGTTTTGCATTTCAACTTTCGTTTTAATGTATTCTCTCTCTCTCTCTCCAATGCATCTTATTTAGGTGATATCTTTTGTGCGTCTGTCATCTTAGGCAAGCAAGAAGCTCTTGCCTTGTGTGTCTTATTTTTCAAACATATATTTGACACTGCTGGCATCACTATTTAAGTTTGTTTATGTAGACCTCTTGAGCAAGACAAAGAGCATGTTGATGAAGTTCATTGTTCCAGAGAAAGAAGTAGGACAGCCTGGAATATCATTGAGGAGGTACGGACTAAACTTTCTTTACTACTTAAAGATAATGGACTCCAGCATTTGAAACAGACATGCTAACTGATGTTCTATTGTTTCTACTGCAGCATTTGCTGCCGTTTATGGAGAAAGAAAATTATCAGGTTTCAACCAAGTGTAGGCTTCATCCAAACAACGATCTCTTCAGAGATCAGGAACAGCACAAGATTCATCTTGATATAAATCATTGGCAGTGTGGATACTGTCGTAAAAGCTTTCGTGCTGAAAAATTTCTTGATAAGCATTTTGACAACAGACATAACAATCTTCTGAATGTTGTATGTTCTTCCTTCATGTTATAATCATTGTTCATAATTAAATTTTATTCTTTAAAGTTACTATATAACATGGTTATCATTTTTAGGTCATGTCTTAGTATCTGCTGTTATTTGGATTGGCCATTGCATAATACATAGGTTTGCCGTAGCAACATCTATATTTACTTGGATTTCATGTTATTGCAGGCAGTGTAG

mRNA sequence

ATGGATGCTGCCAGTTTTCCCCGATGTTTCTTTCCCAATGACAATCCCTCATTGCTCCTTATATTTGATTGCTTTGTGAATTATTGTCACTACACATATGTCTGGGACGTGGAGCAATCTGCAACTTCAAGTAAAAACTTTGATATCCCCACTGAAAATGATCATAAGGCCGGACAACTGAAGATGGGTTTTGAGAATTCTCCCTTAACCAGTGTGAAAACTTTCCAACAATCCCTTGGTGCTGCCAAGAAATCAGTGTCTGAAATACATCCTGTCATCATTTCGGCCATTTACCTTCACATTCCCTTTTCTCCATCACGGCTAGTAGTTACTCCCAATCCAAGAATTAAGTTGTGTTATTCCCCAGTTTTGCATTTCAACTTTCGTTTTAATGTATTCTCTCTCTCTCTCTCCAATGCATCTTATTTAGGTGATATCTTTTGTGCGTCTGTCATCTTAGGCAAGCAAGAAGCTCTTGCCTTACCTCTTGAGCAAGACAAAGAGCATGTTGATGAAGTTCATTGTTCCAGAGAAAGAAGTAGGACAGCCTGGAATATCATTGAGGAGCATTTGCTGCCGTTTATGGAGAAAGAAAATTATCAGGTTTCAACCAAGTGTAGGCTTCATCCAAACAACGATCTCTTCAGAGATCAGGAACAGCACAAGATTCATCTTGATATAAATCATTGGCAGTGTGGATACTGTCGTAAAAGCTTTCGTGCTGAAAAATTTCTTGATAAGCATTTTGACAACAGACATAACAATCTTCTGAATGTTGTTTGCCGTAGCAACATCTATATTTACTTGGATTTCATGTTATTGCAGGCAGTGTAG

Coding sequence (CDS)

ATGGATGCTGCCAGTTTTCCCCGATGTTTCTTTCCCAATGACAATCCCTCATTGCTCCTTATATTTGATTGCTTTGTGAATTATTGTCACTACACATATGTCTGGGACGTGGAGCAATCTGCAACTTCAAGTAAAAACTTTGATATCCCCACTGAAAATGATCATAAGGCCGGACAACTGAAGATGGGTTTTGAGAATTCTCCCTTAACCAGTGTGAAAACTTTCCAACAATCCCTTGGTGCTGCCAAGAAATCAGTGTCTGAAATACATCCTGTCATCATTTCGGCCATTTACCTTCACATTCCCTTTTCTCCATCACGGCTAGTAGTTACTCCCAATCCAAGAATTAAGTTGTGTTATTCCCCAGTTTTGCATTTCAACTTTCGTTTTAATGTATTCTCTCTCTCTCTCTCCAATGCATCTTATTTAGGTGATATCTTTTGTGCGTCTGTCATCTTAGGCAAGCAAGAAGCTCTTGCCTTACCTCTTGAGCAAGACAAAGAGCATGTTGATGAAGTTCATTGTTCCAGAGAAAGAAGTAGGACAGCCTGGAATATCATTGAGGAGCATTTGCTGCCGTTTATGGAGAAAGAAAATTATCAGGTTTCAACCAAGTGTAGGCTTCATCCAAACAACGATCTCTTCAGAGATCAGGAACAGCACAAGATTCATCTTGATATAAATCATTGGCAGTGTGGATACTGTCGTAAAAGCTTTCGTGCTGAAAAATTTCTTGATAAGCATTTTGACAACAGACATAACAATCTTCTGAATGTTGTTTGCCGTAGCAACATCTATATTTACTTGGATTTCATGTTATTGCAGGCAGTGTAG

Protein sequence

MDAASFPRCFFPNDNPSLLLIFDCFVNYCHYTYVWDVEQSATSSKNFDIPTENDHKAGQLKMGFENSPLTSVKTFQQSLGAAKKSVSEIHPVIISAIYLHIPFSPSRLVVTPNPRIKLCYSPVLHFNFRFNVFSLSLSNASYLGDIFCASVILGKQEALALPLEQDKEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYQVSTKCRLHPNNDLFRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHNNLLNVVCRSNIYIYLDFMLLQAV
BLAST of ClCG06G017650 vs. TrEMBL
Match: A0A0A0LU52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002750 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 7.9e-52
Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 1

Query: 155 KQEALALPLEQDKEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYQVSTKCRLHPNNDL 214
           +Q A   PLEQ++EHVDEVHCSRERSRTAWNIIEEHLLPFMEKENY+VST+CRLHPNNDL
Sbjct: 39  EQSATLRPLEQNEEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYEVSTQCRLHPNNDL 98

Query: 215 FRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHNNLLNV 260
           FRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRH+NLLNV
Sbjct: 99  FRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHSNLLNV 143

BLAST of ClCG06G017650 vs. TrEMBL
Match: W9RH16_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008176 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.3e-41
Identity = 82/142 (57.75%), Postives = 106/142 (74.65%), Query Frame = 1

Query: 123 VLHFNFRFNVFSLSLSNASYLGDIFCASVILGKQEAL-----ALPLEQDKEHVDEVHCSR 182
           +  F+F F  F L+L     +  +  +S +  + +       +  L+QD+EHV EVHCSR
Sbjct: 11  ITSFSFFFFFFFLALLFLHGIVPVSSSSPLTSRNQVYEESPGSRTLKQDEEHVPEVHCSR 70

Query: 183 ERSRTAWNIIEEHLLPFMEKENYQVSTKCRLHPNNDLFRDQEQHKIHLDINHWQCGYCRK 242
           ERSR AW I+EE L+PF+E+E YQ+STKCRLHP+ND+FR QEQHK+H+D+N WQCGYC+K
Sbjct: 71  ERSRAAWKIVEEFLMPFVEQERYQISTKCRLHPDNDIFRYQEQHKVHVDMNEWQCGYCKK 130

Query: 243 SFRAEKFLDKHFDNRHNNLLNV 260
           SFRAEKFLD+HFDNRH NLLNV
Sbjct: 131 SFRAEKFLDQHFDNRHYNLLNV 152

BLAST of ClCG06G017650 vs. TrEMBL
Match: A0A0D2PHR9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G061600 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.4e-40
Identity = 73/107 (68.22%), Postives = 92/107 (85.98%), Query Frame = 1

Query: 155 KQEALALPLEQDKEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYQVSTKCRLHPNNDL 214
           ++ + A  L+Q+     EVHCSRERSR AW II+++L+PF+E+E YQ+ST CRLHP+NDL
Sbjct: 28  EESSAARTLKQESHDTHEVHCSRERSRAAWQIIDDYLMPFVEEEGYQISTDCRLHPDNDL 87

Query: 215 FRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHNNLLNVVC 262
           FRDQE+HKIHLD+N W+CGYC+KSFRAE+FLD+HFDNRH NLLNVVC
Sbjct: 88  FRDQERHKIHLDVNEWRCGYCKKSFRAERFLDQHFDNRHYNLLNVVC 134

BLAST of ClCG06G017650 vs. TrEMBL
Match: B9RAN0_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1507400 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.4e-40
Identity = 72/96 (75.00%), Postives = 88/96 (91.67%), Query Frame = 1

Query: 164 EQDKEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYQVSTKCRLHPNNDLFRDQEQHKI 223
           ++DKEH  EVHCSRERSR AW IIEE+L+PF+E+E YQ+S+KCRLHP NDLFRDQE+HKI
Sbjct: 12  KKDKEHAHEVHCSRERSRAAWQIIEEYLMPFVERERYQISSKCRLHPENDLFRDQEEHKI 71

Query: 224 HLDINHWQCGYCRKSFRAEKFLDKHFDNRHNNLLNV 260
           H+DIN W+CGYC+KSFRAE+FLD+HF+NRH NLLN+
Sbjct: 72  HVDINEWKCGYCKKSFRAERFLDQHFENRHYNLLNI 107

BLAST of ClCG06G017650 vs. TrEMBL
Match: K4BK00_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.1e-40
Identity = 71/95 (74.74%), Postives = 87/95 (91.58%), Query Frame = 1

Query: 165 QDKEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYQVSTKCRLHPNNDLFRDQEQHKIH 224
           QDK HV E+HCSRERSR AW ++EE+L+PF+EKE Y++  +CRLHP+NDLFRDQE+HKIH
Sbjct: 51  QDKSHVHEIHCSRERSRAAWKVVEEYLMPFVEKEKYELPRQCRLHPSNDLFRDQEEHKIH 110

Query: 225 LDINHWQCGYCRKSFRAEKFLDKHFDNRHNNLLNV 260
           LD+N W+CGYCRKSFRAEKFLD+HFDNRH+NLL+V
Sbjct: 111 LDVNEWRCGYCRKSFRAEKFLDQHFDNRHSNLLDV 145

BLAST of ClCG06G017650 vs. TAIR10
Match: AT5G63280.1 (AT5G63280.1 C2H2-like zinc finger protein)

HSP 1 Score: 145.2 bits (365), Expect = 6.0e-35
Identity = 62/115 (53.91%), Postives = 83/115 (72.17%), Query Frame = 1

Query: 164 EQDKEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYQVSTKCRLHPNNDLFRDQEQHKI 223
           E +  +  E+HCSRERSR AW II+++L PF+E+E Y++   CRLHP+NDL+RDQE HK+
Sbjct: 39  EVEVSNAPEIHCSRERSRAAWQIIQDYLTPFVERERYEIPKNCRLHPDNDLYRDQEHHKV 98

Query: 224 HLDINHWQCGYCRKSFRAEKFLDKHFDNRHNNLLNVV---CRSNI--YIYLDFML 274
           H+D+  W+CGYC+KSF  EKFLDKHF  RH NLLN     C +++   ++ DF+L
Sbjct: 99  HVDVFEWKCGYCKKSFNDEKFLDKHFSTRHYNLLNTTDTKCLADLCGALHCDFVL 153

BLAST of ClCG06G017650 vs. TAIR10
Match: AT5G40710.1 (AT5G40710.1 zinc finger (C2H2 type) family protein)

HSP 1 Score: 137.9 bits (346), Expect = 9.5e-33
Identity = 54/87 (62.07%), Postives = 73/87 (83.91%), Query Frame = 1

Query: 172 EVHCSRERSRTAWNIIEEHLLPFMEKENYQVSTKCRLHPNNDLFRDQEQHKIHLDINHWQ 231
           E+HCSRERSR AW II+E+L+P++EKE YQ+ + CR+H +ND++R+QE+HK+  DIN W+
Sbjct: 49  EIHCSRERSRVAWKIIQEYLMPYVEKERYQLPSTCRVHRDNDIYREQEEHKLRSDINEWR 108

Query: 232 CGYCRKSFRAEKFLDKHFDNRHNNLLN 259
           CG+C+K+F  EK+LDKHFD+RH NLLN
Sbjct: 109 CGFCKKAFYEEKYLDKHFDSRHYNLLN 135

BLAST of ClCG06G017650 vs. NCBI nr
Match: gi|449440588|ref|XP_004138066.1| (PREDICTED: uncharacterized protein LOC101218367 [Cucumis sativus])

HSP 1 Score: 212.2 bits (539), Expect = 1.1e-51
Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 1

Query: 155 KQEALALPLEQDKEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYQVSTKCRLHPNNDL 214
           +Q A   PLEQ++EHVDEVHCSRERSRTAWNIIEEHLLPFMEKENY+VST+CRLHPNNDL
Sbjct: 39  EQSATLRPLEQNEEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYEVSTQCRLHPNNDL 98

Query: 215 FRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHNNLLNV 260
           FRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRH+NLLNV
Sbjct: 99  FRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHSNLLNV 143

BLAST of ClCG06G017650 vs. NCBI nr
Match: gi|659128998|ref|XP_008464477.1| (PREDICTED: uncharacterized protein LOC103502344 [Cucumis melo])

HSP 1 Score: 209.1 bits (531), Expect = 9.6e-51
Identity = 94/105 (89.52%), Postives = 100/105 (95.24%), Query Frame = 1

Query: 155 KQEALALPLEQDKEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYQVSTKCRLHPNNDL 214
           +Q A   PLEQ++EHVDEVHCSRERSRTAWNIIEEHLLPFME ENY+VST+CRLHPNNDL
Sbjct: 39  EQSATLRPLEQNEEHVDEVHCSRERSRTAWNIIEEHLLPFMEIENYEVSTQCRLHPNNDL 98

Query: 215 FRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHNNLLNV 260
           FRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRH+NLLNV
Sbjct: 99  FRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHSNLLNV 143

BLAST of ClCG06G017650 vs. NCBI nr
Match: gi|645306224|ref|XP_008246045.1| (PREDICTED: uncharacterized protein LOC103344198 [Prunus mume])

HSP 1 Score: 181.0 bits (458), Expect = 2.8e-42
Identity = 78/105 (74.29%), Postives = 94/105 (89.52%), Query Frame = 1

Query: 155 KQEALALPLEQDKEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYQVSTKCRLHPNNDL 214
           ++ A +  LEQ+ EH  EVHCSRERSR AW IIEE+L+PF+E+E+Y++S+KCRLHP+NDL
Sbjct: 35  EKSASSRTLEQEHEHAHEVHCSRERSRAAWKIIEEYLMPFLEQEHYEMSSKCRLHPDNDL 94

Query: 215 FRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHNNLLNV 260
           FRDQEQHKIHLDIN WQCGYC+KSFRAEKFLD+HFDNRH NLLN+
Sbjct: 95  FRDQEQHKIHLDINEWQCGYCKKSFRAEKFLDQHFDNRHYNLLNI 139

BLAST of ClCG06G017650 vs. NCBI nr
Match: gi|645268181|ref|XP_008239410.1| (PREDICTED: uncharacterized protein LOC103338010 isoform X2 [Prunus mume])

HSP 1 Score: 181.0 bits (458), Expect = 2.8e-42
Identity = 78/105 (74.29%), Postives = 94/105 (89.52%), Query Frame = 1

Query: 155 KQEALALPLEQDKEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYQVSTKCRLHPNNDL 214
           ++ A +  LEQ+ EH  EVHCSRERSR AW IIEE+L+PF+E+E+Y++S+KCRLHP+NDL
Sbjct: 35  EKSASSRTLEQEHEHAHEVHCSRERSRAAWKIIEEYLMPFLEQEHYEMSSKCRLHPDNDL 94

Query: 215 FRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHNNLLNV 260
           FRDQEQHKIHLDIN WQCGYC+KSFRAEKFLD+HFDNRH NLLN+
Sbjct: 95  FRDQEQHKIHLDINEWQCGYCKKSFRAEKFLDQHFDNRHYNLLNI 139

BLAST of ClCG06G017650 vs. NCBI nr
Match: gi|645268179|ref|XP_008239409.1| (PREDICTED: uncharacterized protein LOC103338010 isoform X1 [Prunus mume])

HSP 1 Score: 181.0 bits (458), Expect = 2.8e-42
Identity = 78/105 (74.29%), Postives = 94/105 (89.52%), Query Frame = 1

Query: 155 KQEALALPLEQDKEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYQVSTKCRLHPNNDL 214
           ++ A +  LEQ+ EH  EVHCSRERSR AW IIEE+L+PF+E+E+Y++S+KCRLHP+NDL
Sbjct: 35  EKSASSRTLEQEHEHAHEVHCSRERSRAAWKIIEEYLMPFLEQEHYEMSSKCRLHPDNDL 94

Query: 215 FRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHNNLLNV 260
           FRDQEQHKIHLDIN WQCGYC+KSFRAEKFLD+HFDNRH NLLN+
Sbjct: 95  FRDQEQHKIHLDINEWQCGYCKKSFRAEKFLDQHFDNRHYNLLNI 139

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LU52_CUCSA7.9e-5290.48Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002750 PE=4 SV=1[more]
W9RH16_9ROSA1.3e-4157.75Uncharacterized protein OS=Morus notabilis GN=L484_008176 PE=4 SV=1[more]
A0A0D2PHR9_GOSRA2.4e-4068.22Uncharacterized protein OS=Gossypium raimondii GN=B456_001G061600 PE=4 SV=1[more]
B9RAN0_RICCO2.4e-4075.00Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1507400 PE=4 ... [more]
K4BK00_SOLLC4.1e-4074.74Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G63280.16.0e-3553.91 C2H2-like zinc finger protein[more]
AT5G40710.19.5e-3362.07 zinc finger (C2H2 type) family protein[more]
Match NameE-valueIdentityDescription
gi|449440588|ref|XP_004138066.1|1.1e-5190.48PREDICTED: uncharacterized protein LOC101218367 [Cucumis sativus][more]
gi|659128998|ref|XP_008464477.1|9.6e-5189.52PREDICTED: uncharacterized protein LOC103502344 [Cucumis melo][more]
gi|645306224|ref|XP_008246045.1|2.8e-4274.29PREDICTED: uncharacterized protein LOC103344198 [Prunus mume][more]
gi|645268181|ref|XP_008239410.1|2.8e-4274.29PREDICTED: uncharacterized protein LOC103338010 isoform X2 [Prunus mume][more]
gi|645268179|ref|XP_008239409.1|2.8e-4274.29PREDICTED: uncharacterized protein LOC103338010 isoform X1 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG06G017650.1ClCG06G017650.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 232..253
scor
NoneNo IPR availablePANTHERPTHR21385ZINC FINGER PROTEIN-RELATEDcoord: 164..259
score: 3.0
NoneNo IPR availablePANTHERPTHR21385:SF1C2H2-LIKE ZINC FINGER PROTEINcoord: 164..259
score: 3.0

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG06G017650Silver-seed gourdcarwcgB0357
ClCG06G017650Silver-seed gourdcarwcgB0362
ClCG06G017650Silver-seed gourdcarwcgB0430
ClCG06G017650Silver-seed gourdcarwcgB1019
ClCG06G017650Cucumber (Chinese Long) v3cucwcgB080
ClCG06G017650Cucumber (Chinese Long) v3cucwcgB088
ClCG06G017650Cucumber (Chinese Long) v3cucwcgB255
ClCG06G017650Watermelon (97103) v2wcgwmbB262
ClCG06G017650Watermelon (97103) v2wcgwmbB267
ClCG06G017650Watermelon (97103) v2wcgwmbB273
ClCG06G017650Wax gourdwcgwgoB520
ClCG06G017650Wax gourdwcgwgoB528
ClCG06G017650Wax gourdwcgwgoB549
ClCG06G017650Watermelon (Charleston Gray)wcgwcgB144
ClCG06G017650Watermelon (Charleston Gray)wcgwcgB157
ClCG06G017650Watermelon (Charleston Gray)wcgwcgB176
ClCG06G017650Cucumber (Gy14) v1cgywcgB368
ClCG06G017650Cucurbita maxima (Rimu)cmawcgB072
ClCG06G017650Cucurbita maxima (Rimu)cmawcgB134
ClCG06G017650Cucurbita maxima (Rimu)cmawcgB136
ClCG06G017650Cucurbita maxima (Rimu)cmawcgB209
ClCG06G017650Cucurbita maxima (Rimu)cmawcgB237
ClCG06G017650Cucurbita maxima (Rimu)cmawcgB369
ClCG06G017650Cucurbita moschata (Rifu)cmowcgB065
ClCG06G017650Cucurbita moschata (Rifu)cmowcgB119
ClCG06G017650Cucurbita moschata (Rifu)cmowcgB120
ClCG06G017650Cucurbita moschata (Rifu)cmowcgB196
ClCG06G017650Cucurbita moschata (Rifu)cmowcgB223
ClCG06G017650Wild cucumber (PI 183967)cpiwcgB075
ClCG06G017650Wild cucumber (PI 183967)cpiwcgB083
ClCG06G017650Wild cucumber (PI 183967)cpiwcgB256
ClCG06G017650Cucumber (Chinese Long) v2cuwcgB075
ClCG06G017650Cucumber (Chinese Long) v2cuwcgB081
ClCG06G017650Cucumber (Chinese Long) v2cuwcgB248
ClCG06G017650Melon (DHL92) v3.5.1mewcgB160
ClCG06G017650Melon (DHL92) v3.5.1mewcgB254
ClCG06G017650Melon (DHL92) v3.5.1mewcgB439
ClCG06G017650Watermelon (97103) v1wcgwmB322
ClCG06G017650Watermelon (97103) v1wcgwmB344
ClCG06G017650Cucurbita pepo (Zucchini)cpewcgB336
ClCG06G017650Cucurbita pepo (Zucchini)cpewcgB476
ClCG06G017650Cucurbita pepo (Zucchini)cpewcgB563
ClCG06G017650Cucurbita pepo (Zucchini)cpewcgB616
ClCG06G017650Bottle gourd (USVL1VR-Ls)lsiwcgB199
ClCG06G017650Bottle gourd (USVL1VR-Ls)lsiwcgB372
ClCG06G017650Bottle gourd (USVL1VR-Ls)lsiwcgB436
ClCG06G017650Cucumber (Gy14) v2cgybwcgB069
ClCG06G017650Cucumber (Gy14) v2cgybwcgB078
ClCG06G017650Cucumber (Gy14) v2cgybwcgB231
ClCG06G017650Melon (DHL92) v3.6.1medwcgB151
ClCG06G017650Melon (DHL92) v3.6.1medwcgB246
ClCG06G017650Melon (DHL92) v3.6.1medwcgB438