ClCG06G013820 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG06G013820
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	plant intracellular ras group-related LRR 8 LENGTH=383
Location	CG_Chr06 : 27250308 .. 27250868 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCAGACATTAAAAGCTTTGAGTTGACCAATCTCAAGAAGTTGTCAGTCAACTACAATAAACTCGCCTTCCTCCCCCACTCACTCTCTCATCTGACCTCCCTGTGGGTGCTCAACACGCACCTACTGCCTCCGATAGCTCCTAGACGACCTTGAGAACTTGATCAACCTCCAAGTCTCAAACTTATGCCAAAACTTCCGATGCCTACAAGCTCTCCCTTACTCCACTAGCCTCTTTATCTACCTCGTCGAGCTCAACGTCAGCTACTACAAGATCACCTCCCTCTCGAATTCCATAGAGTACCTCAAGAATCTTAAGAAGCTAAACAGGGAAGGCAACCCTCTCGATTTGCCCCCACCCAACGTGAATTGAGCAAGGGGTCGATGTAATGAGAATGTACTTGAGCGATAAGATGAATAGTGCATAGAGTGTCGCAAAAGAAGAGGTCAGGTAAATTGGTCAAGTATGGGACTTTCAACGACATAGGCAATAGGAGTGAGCAAAGGAGATCAAAAGAAAGAGGGGGTTCATCATGCCAAAGTATCCGTTCATCGATGATC

mRNA sequence

CTTCCAGACATTAAAAGCTTTGAGTTGACCAATCTCAAGAAGTTGTCAGTCAACTACAATAAACTCGCCTTCCTCCCCCACTCACTCTCTCATCTGACCTCCCTGTGGCTCCTAGACGACCTTGAGAACTTGATCAACCTCCAAGTCTCAAACTTATGCCAAAACTTCCGATGCCTACAAGCTCTCCCTTACTCCACTAGCCTCTTTATCTACCTCGTCGAGCTCAACGTCAGCTACTACAAGATCACCTCCCTCTCGAATTCCATAGAGCAACCCTCTCGATTTGCCCCCACCCAACTGCATAGAGTGTCGCAAAAGAAGAGGTCAGGTAAATTGGTCAAGTATGGGACTTTCAACGACATAGGCAATAGGAGTGAGCAAAGGAGATCAAAAGAAAGAGGGGGTTCATCATGCCAAAGTATCCGTTCATCGATGATC

Coding sequence (CDS)

CTTCCAGACATTAAAAGCTTTGAGTTGACCAATCTCAAGAAGTTGTCAGTCAACTACAATAAACTCGCCTTCCTCCCCCACTCACTCTCTCATCTGACCTCCCTGTGGCTCCTAGACGACCTTGAGAACTTGATCAACCTCCAAGTCTCAAACTTATGCCAAAACTTCCGATGCCTACAAGCTCTCCCTTACTCCACTAGCCTCTTTATCTACCTCGTCGAGCTCAACGTCAGCTACTACAAGATCACCTCCCTCTCGAATTCCATAGAGCAACCCTCTCGATTTGCCCCCACCCAACTGCATAGAGTGTCGCAAAAGAAGAGGTCAGGTAAATTGGTCAAGTATGGGACTTTCAACGACATAGGCAATAGGAGTGAGCAAAGGAGATCAAAAGAAAGAGGGGGTTCATCATGCCAAAGTATCCGTTCATCGATGATC

Protein sequence

LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLDDLENLINLQVSNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNSIEQPSRFAPTQLHRVSQKKRSGKLVKYGTFNDIGNRSEQRRSKERGGSSCQSIRSSMI

Homology

[Close]

BLAST of ClCG06G013820 vs. Swiss-Prot
Match: PIRL6_ARATH (Plant intracellular Ras-group-related LRR protein 6 OS=Arabidopsis thaliana GN=PIRL6 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.2e-21
Identity = 75/178 (42.13%), Postives = 91/178 (51.12%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LPD   FELTNL+KLS+N NKL  LP S++HLTSL +LD           DLENLINL++
Sbjct: 168 LPDSIGFELTNLRKLSINSNKLISLPISITHLTSLRVLDARLNCLMILPDDLENLINLEI 227

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNSI------------EQPSRFAP 120
            N+ QNF+ L ALP S  L + L+EL+VSY KIT L  SI              P    P
Sbjct: 228 LNVSQNFQYLSALPSSIGLLMNLIELDVSYNKITVLPESIGCMRRLRKLSVEGNPLVSPP 287

Query: 121 TQL---------HRVSQKKRS--------------GKLVKYGTFNDIGNRSEQRRSKE 133
            ++           ++QK                 GKLVKYGTFN  G+RS  R  +E
Sbjct: 288 IEVMEQNLQVVREYLTQKMNGGSPRSPSKKKSWGFGKLVKYGTFNG-GSRSWNREERE 344

[Close]

BLAST of ClCG06G013820 vs. Swiss-Prot
Match: PIRL8_ARATH (Plant intracellular Ras-group-related LRR protein 8 OS=Arabidopsis thaliana GN=PIRL8 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.7e-20
Identity = 58/100 (58.00%), Postives = 66/100 (66.00%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LPD   FELTNL KLSVN NKL  LP+S+S+LTSL +LD           DLENL+NLQV
Sbjct: 165 LPDAIGFELTNLTKLSVNSNKLVLLPNSVSYLTSLRVLDARLNRLSSLPEDLENLVNLQV 224

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNSI 90
            N+ QNF+ L  LPYS  L I LVEL+VSY  IT L +S+
Sbjct: 225 LNVSQNFQHLTTLPYSVGLLISLVELDVSYNGITVLPDSL 264

[Close]

BLAST of ClCG06G013820 vs. Swiss-Prot
Match: PIRL7_ARATH (Plant intracellular Ras-group-related LRR protein 7 OS=Arabidopsis thaliana GN=PIRL7 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.5e-18
Identity = 74/181 (40.88%), Postives = 87/181 (48.07%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LPD    ELTNLKKL VN NKL  LP +++ LTSL +LD           DLENLINL++
Sbjct: 161 LPDNIGLELTNLKKLCVNSNKLISLPATITCLTSLRVLDARLNCLMILPEDLENLINLEI 220

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNSI-----------------EQP 120
            N+ QNF+ L ALP S  L + L+EL++SY KIT L  SI                   P
Sbjct: 221 LNVSQNFQYLSALPSSIGLLLNLLELDISYNKITVLPESIGCMRRLRKLSAEGNPLVSPP 280

Query: 121 SRFAPTQLHRV----------------SQKKRSG--KLVKYGTFNDIGNRSEQRRSKERG 136
                  LH V                ++KK  G  KLVKYGTFN    RS     +ER 
Sbjct: 281 IEVVEQSLHAVREYLSQKMNGKLVNTAAKKKTWGFRKLVKYGTFN---GRSRVWTREERE 338

[Close]

BLAST of ClCG06G013820 vs. Swiss-Prot
Match: PIRL1_ORYSJ (Plant intracellular Ras-group-related LRR protein 1 OS=Oryza sativa subsp. japonica GN=IRL1 PE=2 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 3.4e-15
Identity = 49/100 (49.00%), Postives = 60/100 (60.00%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LPD   FEL +L+KLSVN NKLA LP S SH+T+L  LD            LENL NL+ 
Sbjct: 138 LPDTLGFELHSLRKLSVNSNKLAQLPSSTSHMTALRALDARLNCLRALPDGLENLANLEA 197

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNSI 90
            N+ QNF+ L+ LPY+  L   L EL+VSY  I +L +S+
Sbjct: 198 LNVSQNFQFLRELPYAVGLLASLRELDVSYNSIAALPDSM 237

[Close]

BLAST of ClCG06G013820 vs. Swiss-Prot
Match: PIRL3_ORYSJ (Plant intracellular Ras-group-related LRR protein 3 OS=Oryza sativa subsp. japonica GN=IRL3 PE=2 SV=3)

HSP 1 Score: 52.4 bits (124), Expect = 4.9e-06
Identity = 36/99 (36.36%), Postives = 52/99 (52.53%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LP    +EL NL+KL V+ NKL  LP S+  + SL+LLD            +  L +L++
Sbjct: 246 LPTNIGYELVNLRKLWVHMNKLRSLPSSICEMRSLYLLDAHFNELCGLPSAIGKLSSLEI 305

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNS 89
            NL  NF  L+ LP S    + L EL++S  +I +L ++
Sbjct: 306 LNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALPDN 344

[Close]

BLAST of ClCG06G013820 vs. TrEMBL
Match: A0A0A0M009_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G427510 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.1e-28
Identity = 92/187 (49.20%), Postives = 105/187 (56.15%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LPD   FELTNLKKLSVN NKLAFLPHSLSHLT+L +LD           DLENLINLQV
Sbjct: 169 LPDTIGFELTNLKKLSVNSNKLAFLPHSLSHLTALRVLDSHLNCLRSLPDDLENLINLQV 228

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNSI------------EQPSRFAP 120
            N+ QNF+ LQALPYS  L I LVEL+VSY KI SL +SI              P    P
Sbjct: 229 LNISQNFQFLQALPYSIGLLISLVELDVSYNKIISLPDSIGCLKNLKKLNVEGNPLTSPP 288

Query: 121 TQ-------------------LHRVSQKKRS--GKLVKYGTFNDIGNRSEQRRSKERGGS 144
            +                   +H+ S KKRS  GKLVKYGTFN   +RS +   +E+ G 
Sbjct: 289 PEVIEQGLDTVRMYLTDKMNGVHKDSHKKRSWVGKLVKYGTFN---SRSNKLSREEKEGF 348

[Close]

BLAST of ClCG06G013820 vs. TrEMBL
Match: B9RWX4_RICCO (Leucine-rich repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1704530 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 8.2e-24
Identity = 82/188 (43.62%), Postives = 97/188 (51.60%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LP+   FEL NLKKLSVN NKL FLPHS++HLTSL  LD           DLENLINL+V
Sbjct: 140 LPNTIGFELVNLKKLSVNSNKLVFLPHSITHLTSLKTLDARLNNLRSLPEDLENLINLKV 199

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNSI-----------------EQP 120
            N+ QNF+ L+ LPYS  L   L+EL++SY +ITSL NSI                   P
Sbjct: 200 LNVSQNFQYLETLPYSIGLLFSLIELDISYNRITSLPNSIGCLRKLQKLSVEGNPLVSPP 259

Query: 121 SRFAPTQLHRVS--------------QKKRS--GKLVKYGTFN-DIGNRSEQRRSKERGG 144
                  LH V               QKK+S  GKLVKYGTFN    N+     ++ER  
Sbjct: 260 MEVVEQGLHTVKEYLSEKMNAGHKSPQKKKSWVGKLVKYGTFNGSTRNQINSTNNEERKA 319

[Close]

BLAST of ClCG06G013820 vs. TrEMBL
Match: M5XLL8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008019mg PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-23
Identity = 81/176 (46.02%), Postives = 97/176 (55.11%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LPD   FEL NLKKLSVN NKL FLP SL+HL+SL +LD           DLENLINL++
Sbjct: 139 LPDTIGFELHNLKKLSVNSNKLVFLPRSLTHLSSLRVLDARLNCLRSLPEDLENLINLEI 198

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNSIE------------QPSRFAP 120
            N+ QNF+ L+ LPYS  L + LVEL+VSY KIT+L +SI              P    P
Sbjct: 199 LNVSQNFQYLETLPYSIGLLMSLVELDVSYNKITALPDSIGCLKKLQKLTVQGNPMSSPP 258

Query: 121 TQL-------------------HRVSQKKRS--GKLVKYGTFNDIGNRSEQRRSKE 133
            ++                   H+   KK+S  GKLVKYGTFN  G RS  R  KE
Sbjct: 259 PEVFEQGLHSVKEYLSEKMNGGHKSPPKKKSWMGKLVKYGTFN--GARSVSREEKE 312

[Close]

BLAST of ClCG06G013820 vs. TrEMBL
Match: A0A059CL23_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00085 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-23
Identity = 77/178 (43.26%), Postives = 94/178 (52.81%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LPD   FEL NLKKLSV+ NKL FLPHS SHLTSL +LD           D+ENLI L+V
Sbjct: 97  LPDTIGFELLNLKKLSVSSNKLVFLPHSTSHLTSLRILDARLNCLRSLPADMENLIKLEV 156

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNSI-----------------EQP 120
            N+ QNF+CL+ LPYS  L + L+EL+VSY KIT+L +S+                   P
Sbjct: 157 LNVSQNFQCLETLPYSIGLLLSLIELDVSYNKITALPDSMGCLQKLRKLCVEGNPLTSPP 216

Query: 121 SRFAPTQLHRVSQ---------------KKRSGKLVKYGTFNDIGNRSEQRRSKERGG 136
                  LH V Q               K   GKLV+YGTFN  G+R  +   +E  G
Sbjct: 217 VEVVEQGLHAVKQYLSEKMNAGHRSPTKKSWIGKLVRYGTFN--GSRVSRMNQEESEG 272

[Close]

BLAST of ClCG06G013820 vs. TrEMBL
Match: D7SQF1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00390 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.1e-23
Identity = 78/173 (45.09%), Postives = 93/173 (53.76%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LPD   FEL N+KKLSVN NKL  LP S SHLTSL +LD           DLENLINLQV
Sbjct: 99  LPDTIGFELLNIKKLSVNSNKLMLLPSSTSHLTSLQVLDARLNCLRALPEDLENLINLQV 158

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNS--------------------- 120
            N+ QNF+ L+ LPYS  L + LVEL+ SY +IT+L +S                     
Sbjct: 159 LNVSQNFQYLETLPYSIGLLMSLVELDASYNRITTLPDSMGCLKKLQKLCVEGNPLVSPP 218

Query: 121 ---IEQPSRFAP-------TQLHRVSQKKRS--GKLVKYGTFNDIGNRSEQRR 130
              +EQ  +          T  HR S KK+S  GKLV+YGTFN   N S + R
Sbjct: 219 MEVVEQGMQAVKEYLSEKMTAAHRCSPKKKSWIGKLVRYGTFNGTNNASREER 271

[Close]

BLAST of ClCG06G013820 vs. TAIR10
Match: AT2G19330.1 (AT2G19330.1 plant intracellular ras group-related LRR 6)

HSP 1 Score: 102.8 bits (255), Expect = 1.8e-22
Identity = 75/178 (42.13%), Postives = 91/178 (51.12%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LPD   FELTNL+KLS+N NKL  LP S++HLTSL +LD           DLENLINL++
Sbjct: 168 LPDSIGFELTNLRKLSINSNKLISLPISITHLTSLRVLDARLNCLMILPDDLENLINLEI 227

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNSI------------EQPSRFAP 120
            N+ QNF+ L ALP S  L + L+EL+VSY KIT L  SI              P    P
Sbjct: 228 LNVSQNFQYLSALPSSIGLLMNLIELDVSYNKITVLPESIGCMRRLRKLSVEGNPLVSPP 287

Query: 121 TQL---------HRVSQKKRS--------------GKLVKYGTFNDIGNRSEQRRSKE 133
            ++           ++QK                 GKLVKYGTFN  G+RS  R  +E
Sbjct: 288 IEVMEQNLQVVREYLTQKMNGGSPRSPSKKKSWGFGKLVKYGTFNG-GSRSWNREERE 344

[Close]

BLAST of ClCG06G013820 vs. TAIR10
Match: AT4G26050.1 (AT4G26050.1 plant intracellular ras group-related LRR 8)

HSP 1 Score: 99.8 bits (247), Expect = 1.5e-21
Identity = 58/100 (58.00%), Postives = 66/100 (66.00%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LPD   FELTNL KLSVN NKL  LP+S+S+LTSL +LD           DLENL+NLQV
Sbjct: 165 LPDAIGFELTNLTKLSVNSNKLVLLPNSVSYLTSLRVLDARLNRLSSLPEDLENLVNLQV 224

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNSI 90
            N+ QNF+ L  LPYS  L I LVEL+VSY  IT L +S+
Sbjct: 225 LNVSQNFQHLTTLPYSVGLLISLVELDVSYNGITVLPDSL 264

[Close]

BLAST of ClCG06G013820 vs. TAIR10
Match: AT4G29880.1 (AT4G29880.1 plant intracellular ras group-related LRR 7)

HSP 1 Score: 94.0 bits (232), Expect = 8.3e-20
Identity = 74/181 (40.88%), Postives = 87/181 (48.07%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LPD    ELTNLKKL VN NKL  LP +++ LTSL +LD           DLENLINL++
Sbjct: 161 LPDNIGLELTNLKKLCVNSNKLISLPATITCLTSLRVLDARLNCLMILPEDLENLINLEI 220

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNSI-----------------EQP 120
            N+ QNF+ L ALP S  L + L+EL++SY KIT L  SI                   P
Sbjct: 221 LNVSQNFQYLSALPSSIGLLLNLLELDISYNKITVLPESIGCMRRLRKLSAEGNPLVSPP 280

Query: 121 SRFAPTQLHRV----------------SQKKRSG--KLVKYGTFNDIGNRSEQRRSKERG 136
                  LH V                ++KK  G  KLVKYGTFN    RS     +ER 
Sbjct: 281 IEVVEQSLHAVREYLSQKMNGKLVNTAAKKKTWGFRKLVKYGTFN---GRSRVWTREERE 338

[Close]

BLAST of ClCG06G013820 vs. TAIR10
Match: AT5G05850.1 (AT5G05850.1 plant intracellular ras group-related LRR 1)

HSP 1 Score: 50.8 bits (120), Expect = 8.1e-07
Identity = 38/99 (38.38%), Postives = 48/99 (48.48%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLDDLEN-----------LINLQV 60
           LP    FEL  L+KL ++ NK+  LP S+  + SL  LD   N           L NL+ 
Sbjct: 311 LPTNIGFELVKLEKLLIHLNKIRSLPTSIGEMRSLRYLDAHFNELNGLPNSFGLLTNLEY 370

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNS 89
            NL  NF  LQ LP S    I L EL++S  +I SL ++
Sbjct: 371 LNLSSNFSDLQDLPASFGDLISLQELDLSNNQIHSLPDA 409

HSP 2 Score: 33.9 bits (76), Expect = 1.0e-01
Identity = 28/89 (31.46%), Postives = 40/89 (44.94%), Query Frame = 1


Query: 12  LKKLSVNYNKLAFLPHSLSHLTSLWLL-----------DDLENLINLQVSNLCQNFRCLQ 71
           L ++ ++  KL  LP +   +  L +L           D +  L NL   ++  NF  L+
Sbjct: 206 LDRVDLSGRKLKLLPEAFGKIQGLLVLNLYNNQLQAIPDSIAGLHNLLELDVSTNF--LE 265

Query: 72  ALPYSTSLFIYLVELNVSYYKITSLSNSI 90
            LP S  L   L  LNVS  K+T+L +SI
Sbjct: 266 TLPDSIGLLSKLKILNVSCNKLTTLPDSI 292

HSP 3 Score: 33.5 bits (75), Expect = 1.3e-01
Identity = 26/90 (28.89%), Postives = 41/90 (45.56%), Query Frame = 1


Query: 9   LTNLKKLSVNYNKLAFLPHSLSHLTSLWLLDDLENLIN----------LQVSNLCQNFRC 68
           L+ LK L+V+ NKL  LP S+ H  SL +LD   N +           +++  L  +   
Sbjct: 272 LSKLKILNVSCNKLTTLPDSICHCGSLVVLDASYNNLTYLPTNIGFELVKLEKLLIHLNK 331

Query: 69  LQALPYSTSLFIYLVELNVSYYKITSLSNS 89
           +++LP S      L  L+  + ++  L NS
Sbjct: 332 IRSLPTSIGEMRSLRYLDAHFNELNGLPNS 361

[Close]

BLAST of ClCG06G013820 vs. TAIR10
Match: AT3G11330.1 (AT3G11330.1 plant intracellular ras group-related LRR 9)

HSP 1 Score: 49.7 bits (117), Expect = 1.8e-06
Identity = 35/92 (38.04%), Postives = 46/92 (50.00%), Query Frame = 1


Query: 8   ELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLDDLEN-----------LINLQVSNLCQNF 67
           EL NL+KL V YNK+   P S+  + SL  LD   N           L NL+  NL  NF
Sbjct: 312 ELVNLEKLLVQYNKIRSFPTSIGEMRSLKHLDAHFNELNGLPDSFVLLTNLEYLNLSSNF 371

Query: 68  RCLQALPYSTSLFIYLVELNVSYYKITSLSNS 89
             L+ LP+S    I L EL++S  +I +L ++
Sbjct: 372 SDLKDLPFSFGELISLQELDLSNNQIHALPDT 403

[Close]

BLAST of ClCG06G013820 vs. NCBI nr
Match: gi|659107486|ref|XP_008453698.1| (PREDICTED: plant intracellular Ras-group-related LRR protein 6 [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 2.1e-28
Identity = 91/177 (51.41%), Postives = 102/177 (57.63%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LPD   FELTNLKKLSVN NKLAFLPHSLSHLTSL +LD           DLENLINLQV
Sbjct: 103 LPDTIGFELTNLKKLSVNSNKLAFLPHSLSHLTSLRVLDTHLNCLRSLPDDLENLINLQV 162

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNSI------------EQPSRFAP 120
            N+ QNF+ LQALPYS  L I LVEL+VSY +ITSL +SI              P    P
Sbjct: 163 LNISQNFQFLQALPYSIGLLISLVELDVSYNRITSLPDSIGCLKNLKKLNVEGNPLTSPP 222

Query: 121 TQ--------------------LHRVSQKKRS--GKLVKYGTFNDIGNRSEQRRSKE 133
            +                    +H+ S KKRS  GKLVKYGTF+  GN+   R  KE
Sbjct: 223 PEVIEQGLDTVRMYLTDKMNGVIHKDSHKKRSWVGKLVKYGTFSSRGNK-VSREEKE 278

[Close]

BLAST of ClCG06G013820 vs. NCBI nr
Match: gi|659107486|ref|XP_008453698.1| (PREDICTED: plant intracellular Ras-group-related LRR protein 6 [Cucumis melo])

HSP 1 Score: 37.0 bits (84), Expect = 3.4e+01
Identity = 26/89 (29.21%), Postives = 47/89 (52.81%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLDDLENLINLQVSNLCQNFRCLQ 60
           +P+  +  L NL    V+ N+L FLP+S+  L+ L +L+   NLI + + +  +N R L+
Sbjct: 33  IPESLTARLLNLVSFDVHSNQLKFLPNSIGCLSKLKILNVSGNLI-VSLPSTIENCRSLE 92

Query: 61  ALPYSTSLFIYLVELNVSYYKITSLSNSI 90
                        ELN ++ ++T L ++I
Sbjct: 93  -------------ELNANFNQLTRLPDTI 107

HSP 2 Score: 131.7 bits (330), Expect = 1.0e-27
Identity = 92/187 (49.20%), Postives = 105/187 (56.15%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LPD   FELTNLKKLSVN NKLAFLPHSLSHLT+L +LD           DLENLINLQV
Sbjct: 169 LPDTIGFELTNLKKLSVNSNKLAFLPHSLSHLTALRVLDSHLNCLRSLPDDLENLINLQV 228

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNSI------------EQPSRFAP 120
            N+ QNF+ LQALPYS  L I LVEL+VSY KI SL +SI              P    P
Sbjct: 229 LNISQNFQFLQALPYSIGLLISLVELDVSYNKIISLPDSIGCLKNLKKLNVEGNPLTSPP 288

Query: 121 TQ-------------------LHRVSQKKRS--GKLVKYGTFNDIGNRSEQRRSKERGGS 144
            +                   +H+ S KKRS  GKLVKYGTFN   +RS +   +E+ G 
Sbjct: 289 PEVIEQGLDTVRMYLTDKMNGVHKDSHKKRSWVGKLVKYGTFN---SRSNKLSREEKEGF 348

[Close]

BLAST of ClCG06G013820 vs. NCBI nr
Match: gi|1009105941|ref|XP_015899264.1| (PREDICTED: plant intracellular Ras-group-related LRR protein 6-like [Ziziphus jujuba])

HSP 1 Score: 123.2 bits (308), Expect = 3.6e-25
Identity = 82/178 (46.07%), Postives = 96/178 (53.93%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LPD   FELTNLKKLSVN NKL FLP SLSHLT+L +LD           DLENLINL+V
Sbjct: 148 LPDTIGFELTNLKKLSVNSNKLVFLPRSLSHLTALRVLDVRLNCLRSLPEDLENLINLEV 207

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNSIE------------QPSRFAP 120
            N+ QNF+ L  LPYS  L + LVEL+VSY K+TSL +S+              P    P
Sbjct: 208 LNVSQNFQYLDTLPYSIGLLLSLVELDVSYNKLTSLPDSLGCLKKLQKLSVEGNPMVSPP 267

Query: 121 TQL-------------------HRVSQKKRS--GKLVKYGTFNDIGNRSEQRRSKERG 135
            ++                   HR   KK+S  GKLVKYGTFN     S  RR +  G
Sbjct: 268 MEVFEQGLHAVKEYLSQKMNGGHRTPPKKKSWVGKLVKYGTFNGHSRASGSRREEREG 325

[Close]

BLAST of ClCG06G013820 vs. NCBI nr
Match: gi|1009105941|ref|XP_015899264.1| (PREDICTED: plant intracellular Ras-group-related LRR protein 6-like [Ziziphus jujuba])

HSP 1 Score: 37.0 bits (84), Expect = 3.4e+01
Identity = 34/113 (30.09%), Postives = 55/113 (48.67%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLDDLENLINLQVSNLCQNFRCLQ 60
           +P+  +  L N+  L V  N+L FLP+S+  L+ L +L+   NL              L+
Sbjct: 78  IPESLTARLLNVVVLDVRSNQLKFLPNSIGCLSKLKILNVSGNL--------------LE 137

Query: 61  ALPYSTSLFIYLVELNVSYYKITSLSNSIEQPSRFAPTQLHRVSQKKRSGKLV 114
           +LP +      L ELN ++ K++ L ++I     F  T L ++S    S KLV
Sbjct: 138 SLPKTIENCRSLEELNANFNKLSKLPDTI----GFELTNLKKLS--VNSNKLV 170

HSP 2 Score: 123.2 bits (308), Expect = 3.6e-25
Identity = 82/178 (46.07%), Postives = 96/178 (53.93%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LPD   FELTNLKKLSVN NKL FLP SLSHLT+L +LD           DLENLINL+V
Sbjct: 27  LPDTIGFELTNLKKLSVNSNKLVFLPRSLSHLTALRVLDVRLNCLRSLPEDLENLINLEV 86

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNSIE------------QPSRFAP 120
            N+ QNF+ L  LPYS  L + LVEL+VSY K+TSL +S+              P    P
Sbjct: 87  LNVSQNFQYLDTLPYSIGLLLSLVELDVSYNKLTSLPDSLGCLKKLQKLSVEGNPMVSPP 146

Query: 121 TQL-------------------HRVSQKKRS--GKLVKYGTFNDIGNRSEQRRSKERG 135
            ++                   HR   KK+S  GKLVKYGTFN     S  RR +  G
Sbjct: 147 MEVFEQGLHAVKEYLSQKMNGGHRTPPKKKSWVGKLVKYGTFNGHSRASGSRREEREG 204

[Close]

BLAST of ClCG06G013820 vs. NCBI nr
Match: gi|255554408|ref|XP_002518243.1| (PREDICTED: plant intracellular Ras-group-related LRR protein 6 [Ricinus communis])

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-23
Identity = 82/188 (43.62%), Postives = 97/188 (51.60%), Query Frame = 1


Query: 1   LPDIKSFELTNLKKLSVNYNKLAFLPHSLSHLTSLWLLD-----------DLENLINLQV 60
           LP+   FEL NLKKLSVN NKL FLPHS++HLTSL  LD           DLENLINL+V
Sbjct: 140 LPNTIGFELVNLKKLSVNSNKLVFLPHSITHLTSLKTLDARLNNLRSLPEDLENLINLKV 199

Query: 61  SNLCQNFRCLQALPYSTSLFIYLVELNVSYYKITSLSNSI-----------------EQP 120
            N+ QNF+ L+ LPYS  L   L+EL++SY +ITSL NSI                   P
Sbjct: 200 LNVSQNFQYLETLPYSIGLLFSLIELDISYNRITSLPNSIGCLRKLQKLSVEGNPLVSPP 259

Query: 121 SRFAPTQLHRVS--------------QKKRS--GKLVKYGTFN-DIGNRSEQRRSKERGG 144
                  LH V               QKK+S  GKLVKYGTFN    N+     ++ER  
Sbjct: 260 MEVVEQGLHTVKEYLSEKMNAGHKSPQKKKSWVGKLVKYGTFNGSTRNQINSTNNEERKA 319

The following BLAST results are available for this feature:

BLAST of ClCG06G013820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PIRL6_ARATH	3.2e-21	42.13	Plant intracellular Ras-group-related LRR protein 6 OS=Arabidopsis thaliana GN=P...	[more]
PIRL8_ARATH	2.7e-20	58.00	Plant intracellular Ras-group-related LRR protein 8 OS=Arabidopsis thaliana GN=P...	[more]
PIRL7_ARATH	1.5e-18	40.88	Plant intracellular Ras-group-related LRR protein 7 OS=Arabidopsis thaliana GN=P...	[more]
PIRL1_ORYSJ	3.4e-15	49.00	Plant intracellular Ras-group-related LRR protein 1 OS=Oryza sativa subsp. japon...	[more]
PIRL3_ORYSJ	4.9e-06	36.36	Plant intracellular Ras-group-related LRR protein 3 OS=Oryza sativa subsp. japon...	[more]

BLAST of ClCG06G013820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M009_CUCSA	7.1e-28	49.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G427510 PE=4 SV=1	[more]
B9RWX4_RICCO	8.2e-24	43.62	Leucine-rich repeat-containing protein, putative OS=Ricinus communis GN=RCOM_170...	[more]
M5XLL8_PRUPE	1.1e-23	46.02	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008019mg PE=4 SV=1	[more]
A0A059CL23_EUCGR	1.8e-23	43.26	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00085 PE=4 SV=1	[more]
D7SQF1_VITVI	3.1e-23	45.09	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00390 PE=4 SV=...	[more]

BLAST of ClCG06G013820 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G19330.1	1.8e-22	42.13	plant intracellular ras group-related LRR 6	[more]
AT4G26050.1	1.5e-21	58.00	plant intracellular ras group-related LRR 8	[more]
AT4G29880.1	8.3e-20	40.88	plant intracellular ras group-related LRR 7	[more]
AT5G05850.1	8.1e-07	38.38	plant intracellular ras group-related LRR 1	[more]
AT3G11330.1	1.8e-06	38.04	plant intracellular ras group-related LRR 9	[more]

BLAST of ClCG06G013820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107486\|ref\|XP_008453698.1\|	2.1e-28	51.41	PREDICTED: plant intracellular Ras-group-related LRR protein 6 [Cucumis melo]	[more]
gi\|659107486\|ref\|XP_008453698.1\|	3.4e+01	29.21	PREDICTED: plant intracellular Ras-group-related LRR protein 6 [Cucumis melo]	[more]
gi\|1009105941\|ref\|XP_015899264.1\|	3.6e-25	46.07	PREDICTED: plant intracellular Ras-group-related LRR protein 6-like [Ziziphus ju...	[more]
gi\|1009105941\|ref\|XP_015899264.1\|	3.4e+01	30.09	PREDICTED: plant intracellular Ras-group-related LRR protein 6-like [Ziziphus ju...	[more]
gi\|255554408\|ref\|XP_002518243.1\|	1.2e-23	43.62	PREDICTED: plant intracellular Ras-group-related LRR protein 6 [Ricinus communis...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006470	protein dephosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004721	phosphoprotein phosphatase activity
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G013820.1	ClCG06G013820.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG06G013820	MELO3C017412	Melon (DHL92) v3.5.1	mewcgB254
ClCG06G013820	CsaV3_1G032040	Cucumber (Chinese Long) v3	cucwcgB075
ClCG06G013820	CsaV3_2G008970	Cucumber (Chinese Long) v3	cucwcgB157

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG06G013820	Cucurbita maxima (Rimu)	cmawcgB071
ClCG06G013820	Cucurbita maxima (Rimu)	cmawcgB135
ClCG06G013820	Cucurbita maxima (Rimu)	cmawcgB165
ClCG06G013820	Cucurbita moschata (Rifu)	cmowcgB064
ClCG06G013820	Cucurbita moschata (Rifu)	cmowcgB119
ClCG06G013820	Cucurbita moschata (Rifu)	cmowcgB154
ClCG06G013820	Wild cucumber (PI 183967)	cpiwcgB072
ClCG06G013820	Wild cucumber (PI 183967)	cpiwcgB084
ClCG06G013820	Wild cucumber (PI 183967)	cpiwcgB152
ClCG06G013820	Cucumber (Chinese Long) v2	cuwcgB066
ClCG06G013820	Cucumber (Chinese Long) v2	cuwcgB150
ClCG06G013820	Melon (DHL92) v3.5.1	mewcgB397
ClCG06G013820	Watermelon (97103) v1	wcgwmB343
ClCG06G013820	Watermelon (97103) v1	wcgwmB344
ClCG06G013820	Cucurbita pepo (Zucchini)	cpewcgB335
ClCG06G013820	Cucurbita pepo (Zucchini)	cpewcgB616
ClCG06G013820	Cucurbita pepo (Zucchini)	cpewcgB745
ClCG06G013820	Bottle gourd (USVL1VR-Ls)	lsiwcgB108
ClCG06G013820	Bottle gourd (USVL1VR-Ls)	lsiwcgB372
ClCG06G013820	Cucumber (Gy14) v2	cgybwcgB064
ClCG06G013820	Cucumber (Gy14) v2	cgybwcgB139
ClCG06G013820	Melon (DHL92) v3.6.1	medwcgB246
ClCG06G013820	Melon (DHL92) v3.6.1	medwcgB387
ClCG06G013820	Silver-seed gourd	carwcgB0581
ClCG06G013820	Silver-seed gourd	carwcgB0764
ClCG06G013820	Cucumber (Chinese Long) v3	cucwcgB089
ClCG06G013820	Watermelon (97103) v2	wcgwmbB259
ClCG06G013820	Watermelon (97103) v2	wcgwmbB273
ClCG06G013820	Wax gourd	wcgwgoB548
ClCG06G013820	Watermelon (Charleston Gray)	wcgwcgB072
ClCG06G013820	Cucurbita maxima (Rimu)	cmawcgB133
ClCG06G013820	Cucumber (Gy14) v1	cgywcgB165
ClCG06G013820	Cucumber (Gy14) v1	cgywcgB488