ClCG06G009210 (gene) Watermelon (Charleston Gray)

Overview
NameClCG06G009210
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionATP synthase subunit a
LocationCG_Chr06 : 15200968 .. 15201449 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGTCACTTTTACATTTTCATTATTTTGCAATCCCTTGGGTATGCTACCTTATAGCTTCATAGTTTCAAGTCATTTTCTTATTACTTTAGGTCTCTAATTTTCTTTTTTTATTGATATTACTATGGTGGGATTTCAAAGAAATAGGCTTCATTTTTAAAGTTTCTCATTACCCTCAGGAGTCCCACTGCCATTAGCACCTTTTTTAGTACTCCTTGGGCTAATCCCTTATTATTTTCGTGCATTTAGCTCAGGAATACGTTTAGTTACCAATGTGATGGTCGATCATAGTTTAGTAAAGATTTTAAGTGGGTTCGCTTGGACTATGCTATGTATGAATAATCTTTTCTATTTCATACGAGATCCTAGTTCTTTATTGTTCTTGCATTAACTGGTTTGGAATTAGGTGTAGCTATATCACAAGCTCATGTTTCTACAATCTCAAGATGTATTTACTTGAATGATGTTATTACCAATTAG

mRNA sequence

ATGTCTGTCACTTTTACATTTTCATTATTTTGCAATCCCTTGGGTATGCTACCTTATAGCTTCATAGTTTCAAGTCATTTTCTTATTACTTTAGGAGTCCCACTGCCATTAGCACCTTTTTTAGTACTCCTTGGGCTAATCCCTTATTATTTTCGTGCATTTAGCTCAGGAATACGTTTAGTTACCAATGTGATGGTCGATCATAGTTTAGTAAAGATTTTAAGTGGGTTCGCTTGGACTATGCTATGTATGAATAATCTTTTCTATTTCATACGAGATCCTAGTGTAGCTATATCACAAGCTCATGTTTCTACAATCTCAAGATGTATTTACTTGAATGATGTTATTACCAATTAG

Coding sequence (CDS)

ATGTCTGTCACTTTTACATTTTCATTATTTTGCAATCCCTTGGGTATGCTACCTTATAGCTTCATAGTTTCAAGTCATTTTCTTATTACTTTAGGAGTCCCACTGCCATTAGCACCTTTTTTAGTACTCCTTGGGCTAATCCCTTATTATTTTCGTGCATTTAGCTCAGGAATACGTTTAGTTACCAATGTGATGGTCGATCATAGTTTAGTAAAGATTTTAAGTGGGTTCGCTTGGACTATGCTATGTATGAATAATCTTTTCTATTTCATACGAGATCCTAGTGTAGCTATATCACAAGCTCATGTTTCTACAATCTCAAGATGTATTTACTTGAATGATGTTATTACCAATTAG

Protein sequence

MSVTFTFSLFCNPLGMLPYSFIVSSHFLITLGVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFIRDPSVAISQAHVSTISRCIYLNDVITN
Homology
[Close]
BLAST of ClCG06G009210 vs. Swiss-Prot
Match: ATP6_TOBAC (ATP synthase subunit a OS=Nicotiana tabacum GN=ATP6 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.1e-39
Identity = 94/159 (59.12%), Postives = 97/159 (61.01%), Query Frame = 1 

Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITLG---------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITLG                            
Sbjct: 221 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 280

Query: 61  -VPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
            VPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+L YFI
Sbjct: 281 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLLYFI 340

[Close]
BLAST of ClCG06G009210 vs. Swiss-Prot
Match: ATP6_VICFA (ATP synthase subunit a OS=Vicia faba GN=ATP6 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.8e-36
Identity = 90/155 (58.06%), Postives = 92/155 (59.35%), Query Frame = 1 

Query: 3   VTFTFSLFCNPLGMLPYSFIVSSHFLITLG-----------------------------V 62
           VTFTF LFCN  GM+PYSF V+SHFLITLG                             V
Sbjct: 123 VTFTFLLFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSFLLPAGV 182

Query: 63  PLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFIRD 115
           PLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTMLCMN+L YFI D
Sbjct: 183 PLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDLLYFIGD 242

[Close]
BLAST of ClCG06G009210 vs. Swiss-Prot
Match: ATP6_WHEAT (ATP synthase subunit a OS=Triticum aestivum GN=ATP6 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.8e-36
Identity = 90/157 (57.32%), Postives = 95/157 (60.51%), Query Frame = 1 

Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL----------------------------- 60
           +SVTFTFSLF NP GM+P+SF V+SHFLITL                             
Sbjct: 218 ISVTFTFSLFRNPQGMIPFSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPA 277

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 115
           GVPLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTML +NN+FYFI
Sbjct: 278 GVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLFLNNIFYFI 337

[Close]
BLAST of ClCG06G009210 vs. Swiss-Prot
Match: ATP6_TRITI (ATP synthase subunit a OS=Triticum timopheevii GN=ATP6 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.8e-36
Identity = 90/157 (57.32%), Postives = 95/157 (60.51%), Query Frame = 1 

Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL----------------------------- 60
           +SVTFTFSLF NP GM+P+SF V+SHFLITL                             
Sbjct: 218 ISVTFTFSLFRNPQGMIPFSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPA 277

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 115
           GVPLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTML +NN+FYFI
Sbjct: 278 GVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLFLNNIFYFI 337

[Close]
BLAST of ClCG06G009210 vs. Swiss-Prot
Match: ATP6_MAIZE (ATP synthase subunit a OS=Zea mays GN=ATP6 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-35
Identity = 88/157 (56.05%), Postives = 95/157 (60.51%), Query Frame = 1 

Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL----------------------------- 60
           +SVTFTFSLF NP GM+P+SF V+SHFLITL                             
Sbjct: 115 ISVTFTFSLFRNPQGMIPFSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPA 174

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 115
           GVPLPLAPFLVLL LI + FRA SSGIRL  N+M  HS VKILSGFAWTML +NN+FYF+
Sbjct: 175 GVPLPLAPFLVLLELISHCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLFLNNIFYFL 234

[Close]
BLAST of ClCG06G009210 vs. TrEMBL
Match: B2VPV2_9ROSI (ATP synthase subunit a (Fragment) OS=Humiria wurdackii GN=atp6 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.1e-38
Identity = 95/159 (59.75%), Postives = 101/159 (63.52%), Query Frame = 1 

Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITLG---------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITLG                            
Sbjct: 62  ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVAFQRNGLHFLSFFLPA 121

Query: 61  -VPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
            VPLPLAPFLVLL LIP+ FRA SSGIRL  N+M  HS VKILSG AWTMLCMN+LFYFI
Sbjct: 122 GVPLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNDLFYFI 181

[Close]
BLAST of ClCG06G009210 vs. TrEMBL
Match: Q9TGX4_SOLTU (ATP synthase subunit a OS=Solanum tuberosum GN=atp6 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 4.7e-38
Identity = 95/159 (59.75%), Postives = 100/159 (62.89%), Query Frame = 1 

Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITLG---------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITLG                            
Sbjct: 214 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 273

Query: 61  -VPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
            VPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 274 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 333

[Close]
BLAST of ClCG06G009210 vs. TrEMBL
Match: A0A0C5APW9_HYONI (ATP synthase subunit a OS=Hyoscyamus niger GN=atp6 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.3e-37
Identity = 94/159 (59.12%), Postives = 99/159 (62.26%), Query Frame = 1 

Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITLG---------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITLG                            
Sbjct: 221 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 280

Query: 61  -VPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
            VPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+L YFI
Sbjct: 281 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLLYFI 340

[Close]
BLAST of ClCG06G009210 vs. TrEMBL
Match: A0A0C5B353_9SOLA (ATP synthase subunit a OS=Nicotiana tabacum/Hyoscyamus niger cybrid GN=atp6 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.3e-37
Identity = 94/159 (59.12%), Postives = 99/159 (62.26%), Query Frame = 1 

Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITLG---------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITLG                            
Sbjct: 221 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 280

Query: 61  -VPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
            VPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+L YFI
Sbjct: 281 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLLYFI 340

[Close]
BLAST of ClCG06G009210 vs. TrEMBL
Match: Q36730_PETPA (ATP synthase subunit a OS=Petunia parodii GN=atp6 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.3e-37
Identity = 94/159 (59.12%), Postives = 99/159 (62.26%), Query Frame = 1 

Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITLG---------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITLG                            
Sbjct: 236 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 295

Query: 61  -VPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
            VPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+L YFI
Sbjct: 296 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLLYFI 355

[Close]
BLAST of ClCG06G009210 vs. TAIR10
Match: AT2G07741.1 (AT2G07741.1 ATPase, F0 complex, subunit A protein)

HSP 1 Score: 142.5 bits (358), Expect = 1.7e-34
Identity = 85/157 (54.14%), Postives = 90/157 (57.32%), Query Frame = 1 

Query: 3   VTFTFSLFCNPLGMLPYSFIVSSHFLITL-----------------------------GV 62
           VTF F LFCN  GM+PYSF V+SHFLITL                             GV
Sbjct: 226 VTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGV 285

Query: 63  PLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI-- 117
           PLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTMLCMN++FYFI  
Sbjct: 286 PLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYFIGA 345

[Close]
BLAST of ClCG06G009210 vs. TAIR10
Match: ATMG01170.1 (ATMG01170.1 ATPase, F0 complex, subunit A protein)

HSP 1 Score: 142.5 bits (358), Expect = 1.7e-34
Identity = 85/157 (54.14%), Postives = 90/157 (57.32%), Query Frame = 1 

Query: 3   VTFTFSLFCNPLGMLPYSFIVSSHFLITL-----------------------------GV 62
           VTF F LFCN  GM+PYSF V+SHFLITL                             GV
Sbjct: 190 VTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGV 249

Query: 63  PLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI-- 117
           PLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTMLCMN++FYFI  
Sbjct: 250 PLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYFIGA 309

[Close]
BLAST of ClCG06G009210 vs. TAIR10
Match: ATMG00410.1 (ATMG00410.1 ATPase subunit 6-1)

HSP 1 Score: 142.5 bits (358), Expect = 1.7e-34
Identity = 85/157 (54.14%), Postives = 90/157 (57.32%), Query Frame = 1 

Query: 3   VTFTFSLFCNPLGMLPYSFIVSSHFLITL-----------------------------GV 62
           VTF F LFCN  GM+PYSF V+SHFLITL                             GV
Sbjct: 226 VTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGV 285

Query: 63  PLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI-- 117
           PLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTMLCMN++FYFI  
Sbjct: 286 PLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYFIGA 345

[Close]
BLAST of ClCG06G009210 vs. NCBI nr
Match: gi|187236983|gb|ACD02170.1| (ATPase subunit 6, partial (mitochondrion) [Humiria wurdackii])

HSP 1 Score: 166.4 bits (420), Expect = 3.0e-38
Identity = 95/159 (59.75%), Postives = 101/159 (63.52%), Query Frame = 1 

Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITLG---------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITLG                            
Sbjct: 62  ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVAFQRNGLHFLSFFLPA 121

Query: 61  -VPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
            VPLPLAPFLVLL LIP+ FRA SSGIRL  N+M  HS VKILSG AWTMLCMN+LFYFI
Sbjct: 122 GVPLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNDLFYFI 181

[Close]
BLAST of ClCG06G009210 vs. NCBI nr
Match: gi|4416214|gb|AAD20262.1| (ATP synthase subunit 6 [Solanum tuberosum])

HSP 1 Score: 165.2 bits (417), Expect = 6.7e-38
Identity = 95/159 (59.75%), Postives = 100/159 (62.89%), Query Frame = 1 

Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITLG---------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITLG                            
Sbjct: 214 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 273

Query: 61  -VPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
            VPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 274 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 333

[Close]
BLAST of ClCG06G009210 vs. NCBI nr
Match: gi|57013888|ref|YP_173362.1| (ATP synthase F0 subunit 6 [Nicotiana tabacum])

HSP 1 Score: 162.9 bits (411), Expect = 3.3e-37
Identity = 94/159 (59.12%), Postives = 99/159 (62.26%), Query Frame = 1 

Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITLG---------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITLG                            
Sbjct: 221 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 280

Query: 61  -VPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
            VPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+L YFI
Sbjct: 281 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLLYFI 340

[Close]
BLAST of ClCG06G009210 vs. NCBI nr
Match: gi|71724856|gb|AAZ38889.1| (ATP synthase subunit 6-2 [Capsicum annuum])

HSP 1 Score: 162.9 bits (411), Expect = 3.3e-37
Identity = 94/159 (59.12%), Postives = 99/159 (62.26%), Query Frame = 1 

Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITLG---------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITLG                            
Sbjct: 257 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 316

Query: 61  -VPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
            VPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+L YFI
Sbjct: 317 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLLYFI 376

[Close]
BLAST of ClCG06G009210 vs. NCBI nr
Match: gi|814071728|ref|YP_009121970.1| (ATPase subunit 6 (mitochondrion) [Hyoscyamus niger])

HSP 1 Score: 162.9 bits (411), Expect = 3.3e-37
Identity = 94/159 (59.12%), Postives = 99/159 (62.26%), Query Frame = 1 

Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITLG---------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITLG                            
Sbjct: 221 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 280

Query: 61  -VPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
            VPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+L YFI
Sbjct: 281 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLLYFI 340

The following BLAST results are available for this feature:
BLAST of ClCG06G009210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATP6_TOBAC2.1e-3959.12ATP synthase subunit a OS=Nicotiana tabacum GN=ATP6 PE=3 SV=1[more]
ATP6_VICFA2.8e-3658.06ATP synthase subunit a OS=Vicia faba GN=ATP6 PE=3 SV=1[more]
ATP6_WHEAT2.8e-3657.32ATP synthase subunit a OS=Triticum aestivum GN=ATP6 PE=3 SV=1[more]
ATP6_TRITI2.8e-3657.32ATP synthase subunit a OS=Triticum timopheevii GN=ATP6 PE=3 SV=1[more]
ATP6_MAIZE1.8e-3556.05ATP synthase subunit a OS=Zea mays GN=ATP6 PE=3 SV=1[more]
BLAST of ClCG06G009210 vs. TrEMBL
Match NameE-valueIdentityDescription
B2VPV2_9ROSI2.1e-3859.75ATP synthase subunit a (Fragment) OS=Humiria wurdackii GN=atp6 PE=4 SV=1[more]
Q9TGX4_SOLTU4.7e-3859.75ATP synthase subunit a OS=Solanum tuberosum GN=atp6 PE=3 SV=1[more]
A0A0C5APW9_HYONI2.3e-3759.12ATP synthase subunit a OS=Hyoscyamus niger GN=atp6 PE=3 SV=1[more]
A0A0C5B353_9SOLA2.3e-3759.12ATP synthase subunit a OS=Nicotiana tabacum/Hyoscyamus niger cybrid GN=atp6 PE=3... [more]
Q36730_PETPA2.3e-3759.12ATP synthase subunit a OS=Petunia parodii GN=atp6 PE=3 SV=1[more]
BLAST of ClCG06G009210 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G07741.11.7e-3454.14 ATPase, F0 complex, subunit A protein[more]
ATMG01170.11.7e-3454.14ATMG01170.1 ATPase, F0 complex, subunit A protein[more]
ATMG00410.11.7e-3454.14ATMG00410.1 ATPase subunit 6-1[more]
BLAST of ClCG06G009210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|187236983|gb|ACD02170.1|3.0e-3859.75ATPase subunit 6, partial (mitochondrion) [Humiria wurdackii][more]
gi|4416214|gb|AAD20262.1|6.7e-3859.75ATP synthase subunit 6 [Solanum tuberosum][more]
gi|57013888|ref|YP_173362.1|3.3e-3759.12ATP synthase F0 subunit 6 [Nicotiana tabacum][more]
gi|71724856|gb|AAZ38889.1|3.3e-3759.12ATP synthase subunit 6-2 [Capsicum annuum][more]
gi|814071728|ref|YP_009121970.1|3.3e-3759.12ATPase subunit 6 (mitochondrion) [Hyoscyamus niger][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000568ATP_synth_F0_asu
Vocabulary: Molecular Function
TermDefinition
GO:0015078hydrogen ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0016020 membrane
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG06G009210.1ClCG06G009210.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000568ATPase, F0 complex, subunit APRINTSPR00123ATPASEAcoord: 32..47
score: 2.4E-15coord: 99..114
score: 2.4E-15coord: 52..74
score: 2.4
IPR000568ATPase, F0 complex, subunit AGENE3DG3DSA:1.20.120.220coord: 25..116
score: 9.9
IPR000568ATPase, F0 complex, subunit APANTHERPTHR11410ATP SYNTHASE SUBUNIT Acoord: 1..116
score: 1.2
IPR000568ATPase, F0 complex, subunit AunknownSSF81336F1F0 ATP synthase subunit Acoord: 4..111
score: 2.35
NoneNo IPR availablePANTHERPTHR11410:SF0ATP SYNTHASE SUBUNIT Acoord: 1..116
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG06G009210Cla97C06G118990Watermelon (97103) v2wcgwmbB273
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG06G009210Wild cucumber (PI 183967)cpiwcgB087
ClCG06G009210Cucumber (Chinese Long) v2cuwcgB085
ClCG06G009210Melon (DHL92) v3.5.1mewcgB259
ClCG06G009210Watermelon (97103) v1wcgwmB344
ClCG06G009210Watermelon (97103) v1wcgwmB350
ClCG06G009210Cucurbita pepo (Zucchini)cpewcgB620
ClCG06G009210Bottle gourd (USVL1VR-Ls)lsiwcgB377
ClCG06G009210Cucumber (Gy14) v2cgybwcgB081
ClCG06G009210Melon (DHL92) v3.6.1medwcgB250
ClCG06G009210Silver-seed gourdcarwcgB0893
ClCG06G009210Cucumber (Chinese Long) v3cucwcgB091
ClCG06G009210Wax gourdwcgwgoB543
ClCG06G009210Cucurbita maxima (Rimu)cmawcgB073
ClCG06G009210Cucurbita maxima (Rimu)cmawcgB137
ClCG06G009210Cucurbita moschata (Rifu)cmowcgB121