ClCG06G007810 (gene) Watermelon (Charleston Gray)

NameClCG06G007810
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr06 : 10052285 .. 10053327 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGATCCAACGTCCAACCCAACCAGAGGCTCTTGCTCCGATTGAAGAAGGTTAGGCCCCCTCTTCTACTATTCCTACCAATGAACCAATTCAGACGACCAAGTACTTCGTTAATGAGTACTGGAGAGAAAGACGATACGAGGAAGCGAAGATAGCTCTGAGGTAAGCGCTTGCCGAAGATGAGTAAGCTAAGATGAGGGTTGAGGATGTGGCAGCCTAGGAAAGAGATAAAGAAGAGTAAGAGAGACTAAGGCTGGAGGAAGAAGAAGTCAATAGAGGAAGAAAGAGAAAAATAAAGCATGGTGTGGAAGGCATCAGAACGGCTGGTGATACGGTTGCATTAAACTAGCCACATCATTAGACAGAACCTGCAAAAGAAGATGTTGATGCAGGCACATTGCCTGTCCAGCATAGTGAGGAGAAAGCCCCCATGGTTGAAAAGGAGAAGGACCTTGCTCCTCTTTTTTAGTATGAAACAAAAGGGCAAACATCTGAGAAAAGTTCGTCAAAGGAGATCCGGAGTAGATTGAAGAAGCCCCGAGGCTCAAGGTGGTGGCTCCAAGGAGCGTTACTAGATCTGCCTCTGCAGCGAAAGGGAAGGCGGATTCGAGCTCAGCTTCCTCAACTCAAAAGAGGGCAAAAGTAAAGAATGCACAGTACATTGTGCTTTCCTCATCTAGTGAATTTGAAGACGAGAGTGAGGTTGCGCAGCTGAAGGAGGCTTCTTAGGAAGAGGAAAATTTTTTACGAGTTTGAATTCTCAAGGAGGAGTGACATCCTTCCTGAATATGTGAGACTCATGATTGAGCATTATGAGTGGGAGGCACTAGCCAGCTCACCAGCACCCACCAACAACTCATTGATTAGAGACTTCTACCTTCGGTTGTAGCCTGAGAAGGACATCTCTATGGTGGTGTGTGTTGGTGGAGTGTAGGCTCCGAGCTTGAGGGAGGTTGTTCTTCCCATCGTTGATAACCAAGCTATATGTTCGAGCCAGTGTGGTGGCGGCAGAGTAGAAGTTGAGCTGAAAGGTGAATAA

mRNA sequence

ATGAAGAGATCCAACGTCCAACCCAACCAGAGGCTCTTGCTCCGATTGAAGAAGACGACCAAGTACTTCGTTAATGAGTACTGGAGAGAAAGACGATACGAGGAAGCGAAGATAGCTCTGAGGCTGGAGGAAGAAGAAGTCAATAGAGGAAGAAAGAGAAAAATAAAGCATGGTGTGGAAGGCATCAGAACGGCTGGTGATACGATTGAAGAAGCCCCGAGGCTCAAGGTGGTGGCTCCAAGGAGCGTTACTAGATCTGCCTCTGCAGCGAAAGGGAAGGCGGATTCGAGCTCAGCTTCCTCAACTCAAAAGAGGGCAAAAGTAAAGAATGCACAGTACATTGTGCTTTCCTCATCTAGTGAATTTGAAGACGAGAGTGAGGCTCCGAGCTTGAGGGAGGTTGTTCTTCCCATCGTTGATAACCAAGCTATATGTTCGAGCCAGTGTGGTGGCGGCAGAGTAGAAGTTGAGCTGAAAGGTGAATAA

Coding sequence (CDS)

ATGAAGAGATCCAACGTCCAACCCAACCAGAGGCTCTTGCTCCGATTGAAGAAGACGACCAAGTACTTCGTTAATGAGTACTGGAGAGAAAGACGATACGAGGAAGCGAAGATAGCTCTGAGGCTGGAGGAAGAAGAAGTCAATAGAGGAAGAAAGAGAAAAATAAAGCATGGTGTGGAAGGCATCAGAACGGCTGGTGATACGATTGAAGAAGCCCCGAGGCTCAAGGTGGTGGCTCCAAGGAGCGTTACTAGATCTGCCTCTGCAGCGAAAGGGAAGGCGGATTCGAGCTCAGCTTCCTCAACTCAAAAGAGGGCAAAAGTAAAGAATGCACAGTACATTGTGCTTTCCTCATCTAGTGAATTTGAAGACGAGAGTGAGGCTCCGAGCTTGAGGGAGGTTGTTCTTCCCATCGTTGATAACCAAGCTATATGTTCGAGCCAGTGTGGTGGCGGCAGAGTAGAAGTTGAGCTGAAAGGTGAATAA

Protein sequence

MKRSNVQPNQRLLLRLKKTTKYFVNEYWRERRYEEAKIALRLEEEEVNRGRKRKIKHGVEGIRTAGDTIEEAPRLKVVAPRSVTRSASAAKGKADSSSASSTQKRAKVKNAQYIVLSSSSEFEDESEAPSLREVVLPIVDNQAICSSQCGGGRVEVELKGE
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG06G007810.1ClCG06G007810.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 33..53
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG06G007810Wax gourdwcgwgoB503
ClCG06G007810Wax gourdwcgwgoB525
ClCG06G007810Watermelon (Charleston Gray)wcgwcgB160
ClCG06G007810Cucumber (Gy14) v1cgywcgB352
ClCG06G007810Cucumber (Gy14) v1cgywcgB452
ClCG06G007810Cucurbita maxima (Rimu)cmawcgB235
ClCG06G007810Cucurbita maxima (Rimu)cmawcgB326
ClCG06G007810Cucurbita maxima (Rimu)cmawcgB328
ClCG06G007810Cucurbita maxima (Rimu)cmawcgB565
ClCG06G007810Cucurbita maxima (Rimu)cmawcgB804
ClCG06G007810Cucurbita moschata (Rifu)cmowcgB221
ClCG06G007810Cucurbita moschata (Rifu)cmowcgB321
ClCG06G007810Cucurbita moschata (Rifu)cmowcgB325
ClCG06G007810Cucurbita moschata (Rifu)cmowcgB746
ClCG06G007810Cucurbita moschata (Rifu)cmowcgB799
ClCG06G007810Wild cucumber (PI 183967)cpiwcgB150
ClCG06G007810Wild cucumber (PI 183967)cpiwcgB255
ClCG06G007810Cucumber (Chinese Long) v2cuwcgB147
ClCG06G007810Melon (DHL92) v3.5.1mewcgB388
ClCG06G007810Melon (DHL92) v3.5.1mewcgB441
ClCG06G007810Watermelon (97103) v1wcgwmB331
ClCG06G007810Watermelon (97103) v1wcgwmB344
ClCG06G007810Cucurbita pepo (Zucchini)cpewcgB143
ClCG06G007810Cucurbita pepo (Zucchini)cpewcgB144
ClCG06G007810Cucurbita pepo (Zucchini)cpewcgB294
ClCG06G007810Cucurbita pepo (Zucchini)cpewcgB561
ClCG06G007810Cucurbita pepo (Zucchini)cpewcgB788
ClCG06G007810Bottle gourd (USVL1VR-Ls)lsiwcgB029
ClCG06G007810Bottle gourd (USVL1VR-Ls)lsiwcgB343
ClCG06G007810Cucumber (Gy14) v2cgybwcgB138
ClCG06G007810Cucumber (Gy14) v2cgybwcgB230
ClCG06G007810Melon (DHL92) v3.6.1medwcgB378
ClCG06G007810Melon (DHL92) v3.6.1medwcgB437
ClCG06G007810Silver-seed gourdcarwcgB0221
ClCG06G007810Silver-seed gourdcarwcgB0936
ClCG06G007810Silver-seed gourdcarwcgB1046
ClCG06G007810Cucumber (Chinese Long) v3cucwcgB155
ClCG06G007810Cucumber (Chinese Long) v3cucwcgB254
ClCG06G007810Watermelon (97103) v2wcgwmbB269
ClCG06G007810Watermelon (97103) v2wcgwmbB273