ClCG06G007790 (gene) Watermelon (Charleston Gray)

Overview
NameClCG06G007790
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUbiquitin conjugating enzyme E2, putative
LocationCG_Chr06 : 10045911 .. 10048465 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCCATCCAATTTCCTTCTTTCCGGCGTTTCCGCCATGCTTCTTTCCCGTCTCCGCCGTTTCTTCTCTTCAAAACCCTCTTCTTCCTCCGCCTACCGCCGCCTCTACACTCCTCCTCTTCCGATCGCCCATACACACACACTCTATCCCCGGCCGCCGTCTCCTCTTCCAATCTACCACGATGATCGTAACTGGTCAGAATCTCCGCCGCCACAGCCGATTTCGATCGGCAACGGCGGAAGTGGAAATGAAGAAAAAACTAGTGCAATATATCGGATTGAGAACGAGAAGGAGGTGTCGACGGACTGCAGTTTCGAGCCGGTTGGCGCCGATATTAGGGAAAATGAAGAAAAAAGTAGTGCGATGTATCGGATTGAGAATGAATTGAGAGCGATGAACGAGGAGGCGGCGACGCACTGCAGTTTCGGGCCGGTGGGCGCCGATATTTTCCGGTGGGAAGGGGTTGTGATTGGGCCGGCTTGTTCTTGCTATGAAGGGGGTATTTTTCACCTTTCAATTCAATTTCCCTCCGACTACCCCTTAAGTCCTCCCCACATCAAGTTTCTAACCAAGGTTAGTTTTGTCCATTTGCCTCATTTTATATTTCTCTTATTATTATTTTTTTCTTCTTATTATTGACTGTTTGGGAATTGCATTTTGGAAAGCCTCACCTTATTCTGAAATTGTAATAAGCAAAATACTCTTCTTTTCTTTTACTTAAAAAAGAAATTATTTATTTATTTAATTTTTAAATTGTGCCCATGGAACAATTCCATTGGTGCTGACCGGGCTATAGCACCCATAATTTTTTCTTTTGTTTTAAAATAGACTTCAACTTTTTGGAAATTTCATTAATATCTTATTACATCCTAACAAAGATTAGAAAGAGAATGAAAACTAAAAGTAATAGTCATTTCAATTTTTTACAAAATAGGAAATCAAATCAATGTCCAATAAATGACAAAATCATCGATTTTGTTTCCTCTTGGTTTGGTTTCCAATTTTCCTTTCCTTTTCTCAAATTAAAATTTGGCTAGCCAAATTGGGGGGTTTTGTTTCTTACTAATAATAAAGTTCACCTTTCATCAAATATAATAACATACTAAAATTTCAAATAATATATAAAAAAATGGGTTCACTTCGATTCTGTCTTATTTTTCAATAAAAACCCAAGCTGAACTAAAGAGGTTTACGCTAAATACAAATCAATATTACCTAATTTTACACTAAAAAATTAAATCAAACTAATGGAGGCTTGGATTGATTCTATTTTTTTTGTTGCACTCTTGATGAAACTATTAGTACATTGTTTCAAAAATACTTTTGAATCGTTTATCTAATATACTTTATCATCTCTCCAAAGAGATATACTTTGGAAGAACGTTGCATTAATATTCTTAATGTTTTTTTAAAAAAGAAAATAAATAAAAAGTTCTCTTAGCATTAGTATTTGGATGGAAATCATTTATCTACACTTTATCACCTCTCTCTCCTTTGCTTCAATTTATGGTCTAACATGTTTTCATTTCTCATCATTTTTTCCTTCACTTCTTCAATATAAGAAATTTCTCCATCTCTCCTATTTTTTTTTTCTAAAATTTTAAATAAATCGAAAAAAACATTCCCATTTATGCGCATGCTGAAATATAGATATAAAAAGTTTCAACCCAAATAGCAAGTATAGAAACGAGAAACAACCAATTTGAAAACAACTTTTATTCACATAGATATATTTTTCTAAATAACTTCTTGAGAAATTTAAATGTGTACTTTCATTTATTAATTTTTGTAACAATGTGTTAAAAGAGAATAAAATACAAGTATAACATTTTAAAAAGTATTTGCAACTATAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTAAACCTTATATACCATCCATTAATATAATTAGGTATTGTCATATTTTATTTGAGAGTTAATTTACTCAACCGAGAAGGTTTAAGGTTTAAGGAGGAACACATTGATTTTTTCCAAAAATATTTTAAGTTTGTTTATCTTCAACCTTTGTTTTTCTTCTATTTCGTAGAGAAGGTAGCTTGTTGGGTAAGGTTTAGATTTGAAAATTCCAAAATAAGATGATTGAGTTTAAAGTATAAAGATGTTCGTATGGAGGAAAAGTAGTTCCATGTTAACAAACATATTGCTACGTATTTACTTTGTTTACATATATAAGAAATATATGTTTCTAATTGATCCCTGTCTTTACTAATAGAAACTCCCATGTGTGTGTGTTTATTGAAACAGATCTACCATCCAAATGTAGGGTTAGATGGAACCATTTACATAGACATATTGAATGGAAATTGGTCTTCAGCATTGACCGTTGAGAAACTTCTACTTTCAATATGCTCAATCCTTTCAAACCCAATTCCTCAAGGCTCCATTACCGAAGCTTCAACAATGTACCTCAATAGTTGGCTCAATTACAACAAGATTGCAAGAGAATGGACCAAAATATATGCAATGCCAAATTGATCTCATCACTACAACCAAAAC

mRNA sequence

TTCCCATCCAATTTCCTTCTTTCCGGCGTTTCCGCCATGCTTCTTTCCCGTCTCCGCCGTTTCTTCTCTTCAAAACCCTCTTCTTCCTCCGCCTACCGCCGCCTCTACACTCCTCCTCTTCCGATCGCCCATACACACACACTCTATCCCCGGCCGCCGTCTCCTCTTCCAATCTACCACGATGATCGTAACTGGTCAGAATCTCCGCCGCCACAGCCGATTTCGATCGGCAACGGCGGAAGTGGAAATGAAGAAAAAACTAGTGCAATATATCGGATTGAGAACGAGAAGGAGGTGTCGACGGACTGCAGTTTCGAGCCGGTTGGCGCCGATATTAGGGAAAATGAAGAAAAAAGTAGTGCGATGTATCGGATTGAGAATGAATTGAGAGCGATGAACGAGGAGGCGGCGACGCACTGCAGTTTCGGGCCGGTGGGCGCCGATATTTTCCGGTGGGAAGGGGTTGTGATTGGGCCGGCTTGTTCTTGCTATGAAGGGGGTATTTTTCACCTTTCAATTCAATTTCCCTCCGACTACCCCTTAAGTCCTCCCCACATCAAGTTTCTAACCAAGATCTACCATCCAAATGTAGGGTTAGATGGAACCATTTACATAGACATATTGAATGGAAATTGGTCTTCAGCATTGACCGTTGAGAAACTTCTACTTTCAATATGCTCAATCCTTTCAAACCCAATTCCTCAAGGCTCCATTACCGAAGCTTCAACAATGTACCTCAATAGTTGGCTCAATTACAACAAGATTGCAAGAGAATGGACCAAAATATATGCAATGCCAAATTGATCTCATCACTACAACCAAAAC

Coding sequence (CDS)

ATGCTTCTTTCCCGTCTCCGCCGTTTCTTCTCTTCAAAACCCTCTTCTTCCTCCGCCTACCGCCGCCTCTACACTCCTCCTCTTCCGATCGCCCATACACACACACTCTATCCCCGGCCGCCGTCTCCTCTTCCAATCTACCACGATGATCGTAACTGGTCAGAATCTCCGCCGCCACAGCCGATTTCGATCGGCAACGGCGGAAGTGGAAATGAAGAAAAAACTAGTGCAATATATCGGATTGAGAACGAGAAGGAGGTGTCGACGGACTGCAGTTTCGAGCCGGTTGGCGCCGATATTAGGGAAAATGAAGAAAAAAGTAGTGCGATGTATCGGATTGAGAATGAATTGAGAGCGATGAACGAGGAGGCGGCGACGCACTGCAGTTTCGGGCCGGTGGGCGCCGATATTTTCCGGTGGGAAGGGGTTGTGATTGGGCCGGCTTGTTCTTGCTATGAAGGGGGTATTTTTCACCTTTCAATTCAATTTCCCTCCGACTACCCCTTAAGTCCTCCCCACATCAAGTTTCTAACCAAGATCTACCATCCAAATGTAGGGTTAGATGGAACCATTTACATAGACATATTGAATGGAAATTGGTCTTCAGCATTGACCGTTGAGAAACTTCTACTTTCAATATGCTCAATCCTTTCAAACCCAATTCCTCAAGGCTCCATTACCGAAGCTTCAACAATGTACCTCAATAGTTGGCTCAATTACAACAAGATTGCAAGAGAATGGACCAAAATATATGCAATGCCAAATTGA

Protein sequence

MLLSRLRRFFSSKPSSSSAYRRLYTPPLPIAHTHTLYPRPPSPLPIYHDDRNWSESPPPQPISIGNGGSGNEEKTSAIYRIENEKEVSTDCSFEPVGADIRENEEKSSAMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSITEASTMYLNSWLNYNKIAREWTKIYAMPN
Homology
[Close]
BLAST of ClCG06G007790 vs. Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.9e-37
Identity = 71/146 (48.63%), Postives = 96/146 (65.75%), Query Frame = 1 

Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI+ EL  +  +   HCS GPVG D+F W+  ++GP  S Y+GG+F L++ FP+DYP
Sbjct: 2   ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP I F TKIYHPN+  +G+I +DIL   WS ALTV K+LLSICS+L +P P    + 
Sbjct: 62  FKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           + + +Y +    YN+ AREWT+ YAM
Sbjct: 122 DIAQIYKSDKEKYNRHAREWTQKYAM 147

[Close]
BLAST of ClCG06G007790 vs. Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.9e-37
Identity = 71/146 (48.63%), Postives = 96/146 (65.75%), Query Frame = 1 

Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI+ EL  +  +   HCS GPVG D+F W+  ++GP  S Y+GG+F L++ FP+DYP
Sbjct: 2   ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP I F TKIYHPN+  +G+I +DIL   WS ALTV K+LLSICS+L +P P    + 
Sbjct: 62  FKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           + + +Y +    YN+ AREWT+ YAM
Sbjct: 122 DIAQIYKSDKEKYNRHAREWTQKYAM 147

[Close]
BLAST of ClCG06G007790 vs. Swiss-Prot
Match: UB2D1_RAT (Ubiquitin-conjugating enzyme E2 D1 OS=Rattus norvegicus GN=Ube2d1 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.9e-37
Identity = 71/146 (48.63%), Postives = 96/146 (65.75%), Query Frame = 1 

Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI+ EL  +  +   HCS GPVG D+F W+  ++GP  S Y+GG+F L++ FP+DYP
Sbjct: 2   ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP I F TKIYHPN+  +G+I +DIL   WS ALTV K+LLSICS+L +P P    + 
Sbjct: 62  FKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           + + +Y +    YN+ AREWT+ YAM
Sbjct: 122 DIAQIYKSDKEKYNRHAREWTQKYAM 147

[Close]
BLAST of ClCG06G007790 vs. Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.9e-37
Identity = 71/146 (48.63%), Postives = 96/146 (65.75%), Query Frame = 1 

Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI+ EL  +  +   HCS GPVG D+F W+  ++GP  S Y+GG+F L++ FP+DYP
Sbjct: 2   ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP I F TKIYHPN+  +G+I +DIL   WS ALTV K+LLSICS+L +P P    + 
Sbjct: 62  FKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           + + +Y +    YN+ AREWT+ YAM
Sbjct: 122 DIAQIYKSDKEKYNRHAREWTQKYAM 147

[Close]
BLAST of ClCG06G007790 vs. Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.6e-36
Identity = 69/146 (47.26%), Postives = 95/146 (65.07%), Query Frame = 1 

Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI  EL+ +  +    CS GPVG D+F W+  ++GP  S Y+GG+F L+I FP+DYP
Sbjct: 2   ALKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP + F T+IYHPN+  +G+I +DIL   WS ALT+ K+LLSICS+L +P P    + 
Sbjct: 62  FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E + +Y      YN++AREWT+ YAM
Sbjct: 122 EIARIYKTDREKYNELAREWTRKYAM 147

[Close]
BLAST of ClCG06G007790 vs. TrEMBL
Match: A0A0A0LI75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G138770 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.9e-68
Identity = 136/201 (67.66%), Postives = 158/201 (78.61%), Query Frame = 1 

Query: 56  SPPPQPISIGNGGSGNEEKTSAIYRIENEKEVSTDCSFEPVGADIRENEEKSS-AMYRIE 115
           S  P P +  +     EEKTS    I+++KE   D S+         NEEKSS AMYRIE
Sbjct: 11  SQKPSPYTPTSPPVRMEEKTSWTRGIDHQKE---DISWG-------NNEEKSSVAMYRIE 70

Query: 116 NELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLSPPHI 175
           NEL++MNEE ATHCSFGPVG DIFRWEGVVIGPA SCYEGGIFH+SIQFPSDYP +PP I
Sbjct: 71  NELKSMNEEVATHCSFGPVGDDIFRWEGVVIGPAGSCYEGGIFHVSIQFPSDYPFTPPSI 130

Query: 176 KFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSITEASTMYL 235
            FLTKI+HPNV +DG+I +DILN NWSSALT+EKLLLSICSILSNPIP GS  EASTM+L
Sbjct: 131 NFLTKIFHPNVEVDGSIGMDILNENWSSALTIEKLLLSICSILSNPIPHGSTNEASTMFL 190

Query: 236 NSWLNYNKIAREWTKIYAMPN 256
           N+WL++N  A++WTK+YAMPN
Sbjct: 191 NNWLDFNDTAKQWTKLYAMPN 201

[Close]
BLAST of ClCG06G007790 vs. TrEMBL
Match: A0A0A0LI75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G138770 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.2e-50
Identity = 127/262 (48.47%), Postives = 154/262 (58.78%), Query Frame = 1 

Query: 1   MLLSRLRRFFSSKPSSSSAYRRLYTPPLPIAHTHTLYPRPPSPLPIYHDDR-NWSESPPP 60
           M  SRLRR FS KPS        YTP  P               P+  +++ +W+     
Sbjct: 1   MFFSRLRRCFSQKPSP-------YTPTSP---------------PVRMEEKTSWTRGIDH 60

Query: 61  QPISIGNGGSGNEEKTS-AIYRIENE-----KEVSTDCSFEPVGADIRENEEKSSAMYRI 120
           Q   I  G   NEEK+S A+YRIENE     +EV+T CSF PVG DI          +R 
Sbjct: 61  QKEDISWGN--NEEKSSVAMYRIENELKSMNEEVATHCSFGPVGDDI----------FRW 120

Query: 121 ENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLSPPH 180
           E  +             GP G+                YEGGIFH+SIQFPSDYP +PP 
Sbjct: 121 EGVV------------IGPAGSC---------------YEGGIFHVSIQFPSDYPFTPPS 180

Query: 181 IKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSITEASTMY 240
           I FLTKI+HPNV +DG+I +DILN NWSSALT+EKLLLSICSILSNPIP GS  EASTM+
Sbjct: 181 INFLTKIFHPNVEVDGSIGMDILNENWSSALTIEKLLLSICSILSNPIPHGSTNEASTMF 201

Query: 241 LNSWLNYNKIAREWTKIYAMPN 256
           LN+WL++N  A++WTK+YAMPN
Sbjct: 241 LNNWLDFNDTAKQWTKLYAMPN 201


HSP 2 Score: 161.4 bits (407), Expect = 1.5e-36
Identity = 75/146 (51.37%), Postives = 99/146 (67.81%), Query Frame = 1 

Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI  EL+ +  +  T CS GP+  D+F W+  ++GPA S YEGGIF L IQFP+DYP
Sbjct: 2   ALRRISKELKDLRLDPPTQCSAGPIKDDLFAWQATIMGPADSPYEGGIFFLEIQFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSI-T 228
             PP I F+TKIYHPN+ L G I +DIL G WS ALT+ K+LLSICS+L++P P   +  
Sbjct: 62  FKPPKISFMTKIYHPNINLSGHICLDILRGQWSPALTISKVLLSICSLLTDPNPDDPLCP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E +  Y      Y+++AREWT+ YAM
Sbjct: 122 EVARQYKTDRKKYDELAREWTQKYAM 147

[Close]
BLAST of ClCG06G007790 vs. TrEMBL
Match: I3MW74_ICTTR (Uncharacterized protein OS=Ictidomys tridecemlineatus PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.5e-36
Identity = 74/146 (50.68%), Postives = 99/146 (67.81%), Query Frame = 1 

Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI  EL  +  +    CS GPVG D+FRW+  ++GP+ S Y+GG+F LSIQFPSDYP
Sbjct: 2   ALKRIHKELLDLARDPPAQCSAGPVGDDMFRWQAAIMGPSDSPYQGGVFFLSIQFPSDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP I F+T+IYHPN+   G I +DIL   WS ALT+ K+LLSICS+L +P P    + 
Sbjct: 62  FKPPKITFITRIYHPNINRSGNICLDILRSEWSPALTISKVLLSICSMLCDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E + +YL     Y+++AREWT+ YAM
Sbjct: 122 EIAKIYLKDRRKYDRVAREWTEKYAM 147

[Close]
BLAST of ClCG06G007790 vs. TrEMBL
Match: A2AFH2_MOUSE (Protein Ube2dnl2 OS=Mus musculus GN=Ube2dnl2 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.3e-36
Identity = 70/146 (47.95%), Postives = 102/146 (69.86%), Query Frame = 1 

Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI+ EL A++++   HCS GPV  ++F W+  ++GP  S Y+GG+F LS+ FP++YP
Sbjct: 10  ALKRIQKELVAISQDPPAHCSAGPVAENMFHWQATIMGPEDSPYQGGVFFLSVHFPNNYP 69

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP + F+T++YHPN+  +G+I +DILN  WS ALT+ KLLLSICS+L +P P    + 
Sbjct: 70  FKPPKVTFITRVYHPNISKNGSICLDILNSMWSPALTISKLLLSICSLLCDPNPDDPLVP 129

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E + +Y      YN++AREWTK YAM
Sbjct: 130 EIAKVYRKDLREYNRLAREWTKRYAM 155

[Close]
BLAST of ClCG06G007790 vs. TrEMBL
Match: G3PRV4_GASAC (Uncharacterized protein OS=Gasterosteus aculeatus PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 5.6e-36
Identity = 71/146 (48.63%), Postives = 99/146 (67.81%), Query Frame = 1 

Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI+ EL  +  +    CS GPVG D+F W+  ++GP  S Y+GG+F L+I FP+DYP
Sbjct: 2   ALKRIQKELHDLQRDPPAQCSAGPVGDDLFHWQATIMGPGDSPYQGGVFFLTIHFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP + F TKIYHPN+  +G+I +DIL   WS ALTV K+LLSICS+L +P P    + 
Sbjct: 62  FKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           + + MY N  + YNK+A++WT+ YAM
Sbjct: 122 DIAHMYKNDKVKYNKLAKDWTQKYAM 147

[Close]
BLAST of ClCG06G007790 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11)

HSP 1 Score: 144.4 bits (363), Expect = 9.4e-35
Identity = 67/146 (45.89%), Postives = 91/146 (62.33%), Query Frame = 1 

Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A  RI  EL+ + ++  ++CS GPV  D+F W+  ++GP  S Y GG+F +SI FP DYP
Sbjct: 2   ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP + F TK+YHPN+  +G+I +DIL   WS ALT+ K+LLSICS+L++P P    + 
Sbjct: 62  FKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E + MY      Y   AR WT+ YAM
Sbjct: 122 EIAHMYKTDRSKYESTARSWTQKYAM 147

[Close]
BLAST of ClCG06G007790 vs. TAIR10
Match: AT5G56150.1 (AT5G56150.1 ubiquitin-conjugating enzyme 30)

HSP 1 Score: 143.7 bits (361), Expect = 1.6e-34
Identity = 66/146 (45.21%), Postives = 91/146 (62.33%), Query Frame = 1 

Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A  RI  ELR +  +    CS GP G D+F+W+  ++GPA S + GG+F ++I FP DYP
Sbjct: 2   ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP + F TK+YHPN+  +G+I +DIL   WS ALTV K+LLSICS+L++P P    + 
Sbjct: 62  FKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E + +Y    + Y   A+ WT+ YAM
Sbjct: 122 EIAHIYKTDRVKYESTAQSWTQKYAM 147

[Close]
BLAST of ClCG06G007790 vs. TAIR10
Match: AT4G27960.2 (AT4G27960.2 ubiquitin conjugating enzyme 9)

HSP 1 Score: 142.9 bits (359), Expect = 2.7e-34
Identity = 66/146 (45.21%), Postives = 91/146 (62.33%), Query Frame = 1 

Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A  RI  EL+ + ++  T CS GPV  D+F W+  ++GP+ S Y GG+F ++I FP DYP
Sbjct: 32  ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 91

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP + F TK++HPN+  +G+I +DIL   WS ALT+ K+LLSICS+L++P P    + 
Sbjct: 92  FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 151

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E + MY      Y   AR WT+ YAM
Sbjct: 152 EIAHMYKTDKNKYESTARTWTQKYAM 177

[Close]
BLAST of ClCG06G007790 vs. TAIR10
Match: AT5G53300.1 (AT5G53300.1 ubiquitin-conjugating enzyme 10)

HSP 1 Score: 142.5 bits (358), Expect = 3.6e-34
Identity = 66/146 (45.21%), Postives = 91/146 (62.33%), Query Frame = 1 

Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A  RI  EL+ + ++  T CS GPV  D+F W+  ++GP+ S Y GG+F ++I FP DYP
Sbjct: 2   ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP + F TK++HPN+  +G+I +DIL   WS ALT+ K+LLSICS+L++P P    + 
Sbjct: 62  FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E + MY      Y   AR WT+ YAM
Sbjct: 122 EIAHMYKTDKNKYESTARSWTQKYAM 147

[Close]
BLAST of ClCG06G007790 vs. TAIR10
Match: AT5G41700.4 (AT5G41700.4 ubiquitin conjugating enzyme 8)

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-33
Identity = 67/147 (45.58%), Postives = 91/147 (61.90%), Query Frame = 1 

Query: 109 AMYRIENELRAMNEEAATHCSF-GPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDY 168
           A  RI  EL+ + ++  T C F GPV  D+F W+  ++GPA S Y GG+F ++I FP DY
Sbjct: 2   ASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61

Query: 169 PLSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-I 228
           P  PP + F TK++HPN+  +G+I +DIL   WS ALT+ K+LLSICS+L++P P    +
Sbjct: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121

Query: 229 TEASTMYLNSWLNYNKIAREWTKIYAM 254
            E + MY      Y   AR WT+ YAM
Sbjct: 122 PEIAHMYKTDRAKYEATARNWTQKYAM 148

[Close]
BLAST of ClCG06G007790 vs. NCBI nr
Match: gi|659114818|ref|XP_008457245.1| (PREDICTED: ubiquitin-conjugating enzyme E2 D1-like [Cucumis melo])

HSP 1 Score: 269.2 bits (687), Expect = 7.2e-69
Identity = 126/153 (82.35%), Postives = 139/153 (90.85%), Query Frame = 1 

Query: 103 NEEKSS-AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSI 162
           NEEKSS AMYRIENEL+AMN+E ATHCSFGPVG DIFRWEG+VIGPACSCYEGGIFH+SI
Sbjct: 51  NEEKSSVAMYRIENELKAMNKEVATHCSFGPVGDDIFRWEGIVIGPACSCYEGGIFHVSI 110

Query: 163 QFPSDYPLSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPI 222
           QFPSDYP +PP I FLTKI+HPNV LDG+I IDIL  NWSSALT+EKLLLSICS+LSNPI
Sbjct: 111 QFPSDYPFTPPSIHFLTKIFHPNVELDGSIKIDILYENWSSALTIEKLLLSICSVLSNPI 170

Query: 223 PQGSITEASTMYLNSWLNYNKIAREWTKIYAMP 255
           PQGS  EASTM+LN WLN+N IAR+WTK+YAMP
Sbjct: 171 PQGSTNEASTMFLNDWLNFNDIARQWTKLYAMP 203

[Close]
BLAST of ClCG06G007790 vs. NCBI nr
Match: gi|659114818|ref|XP_008457245.1| (PREDICTED: ubiquitin-conjugating enzyme E2 D1-like [Cucumis melo])

HSP 1 Score: 137.9 bits (346), Expect = 2.5e-29
Identity = 105/260 (40.38%), Postives = 128/260 (49.23%), Query Frame = 1 

Query: 1   MLLSRLRRFFSSKPSSSSAYRRLYTPPLPIAHTHTLYPRPPSPLPIYHDDRNWSESPPPQ 60
           ML SRLRR F+ K SS S     YTP              P P+P+     +W      Q
Sbjct: 1   MLFSRLRRCFAPKRSSYS-----YTPA-------------PPPVPMIKKT-SWPCGNIDQ 60

Query: 61  PISIGNGGSGNEEKTSAIYRIENE-----KEVSTDCSFEPVGADIRENEEKSSAMYRIEN 120
                  G+  E+ + A+YRIENE     KEV+T CSF PVG DI          +R E 
Sbjct: 61  KDDDIIRGNNEEKSSVAMYRIENELKAMNKEVATHCSFGPVGDDI----------FRWEG 120

Query: 121 ELRAMNEEAATHCSFGPV-GADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLSPPHI 180
            +       A  C  G +    I         P    +   IFH +++            
Sbjct: 121 IVIG----PACSCYEGGIFHVSIQFPSDYPFTPPSIHFLTKIFHPNVE------------ 180

Query: 181 KFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSITEASTMYL 240
                       LDG+I IDIL  NWSSALT+EKLLLSICS+LSNPIPQGS  EASTM+L
Sbjct: 181 ------------LDGSIKIDILYENWSSALTIEKLLLSICSVLSNPIPQGSTNEASTMFL 203

Query: 241 NSWLNYNKIAREWTKIYAMP 255
           N WLN+N IAR+WTK+YAMP
Sbjct: 241 NDWLNFNDIARQWTKLYAMP 203


HSP 2 Score: 267.3 bits (682), Expect = 2.7e-68
Identity = 136/201 (67.66%), Postives = 158/201 (78.61%), Query Frame = 1 

Query: 56  SPPPQPISIGNGGSGNEEKTSAIYRIENEKEVSTDCSFEPVGADIRENEEKSS-AMYRIE 115
           S  P P +  +     EEKTS    I+++KE   D S+         NEEKSS AMYRIE
Sbjct: 11  SQKPSPYTPTSPPVRMEEKTSWTRGIDHQKE---DISWG-------NNEEKSSVAMYRIE 70

Query: 116 NELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLSPPHI 175
           NEL++MNEE ATHCSFGPVG DIFRWEGVVIGPA SCYEGGIFH+SIQFPSDYP +PP I
Sbjct: 71  NELKSMNEEVATHCSFGPVGDDIFRWEGVVIGPAGSCYEGGIFHVSIQFPSDYPFTPPSI 130

Query: 176 KFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSITEASTMYL 235
            FLTKI+HPNV +DG+I +DILN NWSSALT+EKLLLSICSILSNPIP GS  EASTM+L
Sbjct: 131 NFLTKIFHPNVEVDGSIGMDILNENWSSALTIEKLLLSICSILSNPIPHGSTNEASTMFL 190

Query: 236 NSWLNYNKIAREWTKIYAMPN 256
           N+WL++N  A++WTK+YAMPN
Sbjct: 191 NNWLDFNDTAKQWTKLYAMPN 201

[Close]
BLAST of ClCG06G007790 vs. NCBI nr
Match: gi|449442475|ref|XP_004139007.1| (PREDICTED: ubiquitin-conjugating enzyme E2 5A-like [Cucumis sativus])

HSP 1 Score: 206.1 bits (523), Expect = 7.5e-50
Identity = 127/262 (48.47%), Postives = 154/262 (58.78%), Query Frame = 1 

Query: 1   MLLSRLRRFFSSKPSSSSAYRRLYTPPLPIAHTHTLYPRPPSPLPIYHDDR-NWSESPPP 60
           M  SRLRR FS KPS        YTP  P               P+  +++ +W+     
Sbjct: 1   MFFSRLRRCFSQKPSP-------YTPTSP---------------PVRMEEKTSWTRGIDH 60

Query: 61  QPISIGNGGSGNEEKTS-AIYRIENE-----KEVSTDCSFEPVGADIRENEEKSSAMYRI 120
           Q   I  G   NEEK+S A+YRIENE     +EV+T CSF PVG DI          +R 
Sbjct: 61  QKEDISWGN--NEEKSSVAMYRIENELKSMNEEVATHCSFGPVGDDI----------FRW 120

Query: 121 ENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLSPPH 180
           E  +             GP G+                YEGGIFH+SIQFPSDYP +PP 
Sbjct: 121 EGVV------------IGPAGSC---------------YEGGIFHVSIQFPSDYPFTPPS 180

Query: 181 IKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSITEASTMY 240
           I FLTKI+HPNV +DG+I +DILN NWSSALT+EKLLLSICSILSNPIP GS  EASTM+
Sbjct: 181 INFLTKIFHPNVEVDGSIGMDILNENWSSALTIEKLLLSICSILSNPIPHGSTNEASTMF 201

Query: 241 LNSWLNYNKIAREWTKIYAMPN 256
           LN+WL++N  A++WTK+YAMPN
Sbjct: 241 LNNWLDFNDTAKQWTKLYAMPN 201


HSP 2 Score: 161.8 bits (408), Expect = 1.6e-36
Identity = 73/146 (50.00%), Postives = 98/146 (67.12%), Query Frame = 1 

Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           AM RI  EL+ +  +    CS GPVG D+F W+  ++GP+ S Y GG+F LSI FP+DYP
Sbjct: 2   AMKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATILGPSESAYSGGVFFLSIHFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP + F TKIYHPN+  +G+I +DIL   WS ALT+ K+LLSICS+L++P P    + 
Sbjct: 62  FKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E + +Y  +   YN +AREWTK YAM
Sbjct: 122 EIARLYKTNRTKYNDLAREWTKKYAM 147

[Close]
BLAST of ClCG06G007790 vs. NCBI nr
Match: gi|720057631|ref|XP_010274033.1| (PREDICTED: ubiquitin-conjugating enzyme E2 D1-like isoform X3 [Nelumbo nucifera])

HSP 1 Score: 161.4 bits (407), Expect = 2.1e-36
Identity = 74/142 (52.11%), Postives = 98/142 (69.01%), Query Frame = 1 

Query: 112 RIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLSP 171
           R+  EL A  ++  +HCS GPVG DIF W+GV++GP C+ YEGG+F LSI  P DYP SP
Sbjct: 55  RLLKELDATKKDPLSHCSCGPVGNDIFEWQGVIMGPECTPYEGGLFFLSIHIPEDYPNSP 114

Query: 172 PHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSITEAST 231
           P IKF TK+ HPN+  DGTI++DIL   W+  LT+E +LLSICS+L++P    S    + 
Sbjct: 115 PEIKFKTKVIHPNIDEDGTIHLDILWDRWTPVLTIEWVLLSICSLLADPNADISFNPIAI 174

Query: 232 MYLNSWLNYNKIAREWTKIYAM 254
           +Y N+   YNK  +EWT+ YAM
Sbjct: 175 LYRNNREEYNKKTKEWTRKYAM 196

[Close]
BLAST of ClCG06G007790 vs. NCBI nr
Match: gi|350644836|emb|CCD60467.1| (ubiquitin conjugating enzyme E2, putative [Schistosoma mansoni])

HSP 1 Score: 161.4 bits (407), Expect = 2.1e-36
Identity = 75/146 (51.37%), Postives = 99/146 (67.81%), Query Frame = 1 

Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI  EL+ +  +  T CS GP+  D+F W+  ++GPA S YEGGIF L IQFP+DYP
Sbjct: 2   ALRRISKELKDLRLDPPTQCSAGPIKDDLFAWQATIMGPADSPYEGGIFFLEIQFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSI-T 228
             PP I F+TKIYHPN+ L G I +DIL G WS ALT+ K+LLSICS+L++P P   +  
Sbjct: 62  FKPPKISFMTKIYHPNINLSGHICLDILRGQWSPALTISKVLLSICSLLTDPNPDDPLCP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E +  Y      Y+++AREWT+ YAM
Sbjct: 122 EVARQYKTDRKKYDELAREWTQKYAM 147

The following BLAST results are available for this feature:
BLAST of ClCG06G007790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UB2D1_BOVIN1.9e-3748.63Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1[more]
UB2D1_HUMAN1.9e-3748.63Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1[more]
UB2D1_RAT1.9e-3748.63Ubiquitin-conjugating enzyme E2 D1 OS=Rattus norvegicus GN=Ube2d1 PE=1 SV=1[more]
UB2D1_MOUSE1.9e-3748.63Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1[more]
UBCD1_DROME1.6e-3647.26Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=2 SV... [more]
BLAST of ClCG06G007790 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LI75_CUCSA1.9e-6867.66Uncharacterized protein OS=Cucumis sativus GN=Csa_2G138770 PE=4 SV=1[more]
A0A0A0LI75_CUCSA5.2e-5048.47Uncharacterized protein OS=Cucumis sativus GN=Csa_2G138770 PE=4 SV=1[more]
I3MW74_ICTTR2.5e-3650.68Uncharacterized protein OS=Ictidomys tridecemlineatus PE=3 SV=1[more]
A2AFH2_MOUSE3.3e-3647.95Protein Ube2dnl2 OS=Mus musculus GN=Ube2dnl2 PE=3 SV=1[more]
G3PRV4_GASAC5.6e-3648.63Uncharacterized protein OS=Gasterosteus aculeatus PE=3 SV=1[more]
BLAST of ClCG06G007790 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G08690.19.4e-3545.89 ubiquitin-conjugating enzyme 11[more]
AT5G56150.11.6e-3445.21 ubiquitin-conjugating enzyme 30[more]
AT4G27960.22.7e-3445.21 ubiquitin conjugating enzyme 9[more]
AT5G53300.13.6e-3445.21 ubiquitin-conjugating enzyme 10[more]
AT5G41700.41.4e-3345.58 ubiquitin conjugating enzyme 8[more]
BLAST of ClCG06G007790 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114818|ref|XP_008457245.1|7.2e-6982.35PREDICTED: ubiquitin-conjugating enzyme E2 D1-like [Cucumis melo][more]
gi|659114818|ref|XP_008457245.1|2.5e-2940.38PREDICTED: ubiquitin-conjugating enzyme E2 D1-like [Cucumis melo][more]
gi|449442475|ref|XP_004139007.1|7.5e-5048.47PREDICTED: ubiquitin-conjugating enzyme E2 5A-like [Cucumis sativus][more]
gi|720057631|ref|XP_010274033.1|2.1e-3652.11PREDICTED: ubiquitin-conjugating enzyme E2 D1-like isoform X3 [Nelumbo nucifera][more]
gi|350644836|emb|CCD60467.1|2.1e-3651.37ubiquitin conjugating enzyme E2, putative [Schistosoma mansoni][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030509 BMP signaling pathway
biological_process GO:0034138 toll-like receptor 3 signaling pathway
biological_process GO:0044238 primary metabolic process
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0035666 TRIF-dependent toll-like receptor signaling pathway
biological_process GO:0007179 transforming growth factor beta receptor signaling pathway
biological_process GO:0038095 Fc-epsilon receptor signaling pathway
biological_process GO:0034142 toll-like receptor 4 signaling pathway
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
biological_process GO:0002223 stimulatory C-type lectin receptor signaling pathway
biological_process GO:0061418 regulation of transcription from RNA polymerase II promoter in response to hypoxia
biological_process GO:0070936 protein K48-linked ubiquitination
biological_process GO:0051437 positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
biological_process GO:0000122 negative regulation of transcription from RNA polymerase II promoter
biological_process GO:0007094 mitotic spindle assembly checkpoint
biological_process GO:0000090 mitotic anaphase
cellular_component GO:0005829 cytosol
cellular_component GO:0005654 nucleoplasm
cellular_component GO:0000151 ubiquitin ligase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0061631 ubiquitin conjugating enzyme activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG06G007790.1ClCG06G007790.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 112..247
score: 1.4
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 111..223
score: 30
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 102..253
score: 2.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 106..253
score: 4.07
NoneNo IPR availableunknownCoilCoilcoord: 103..123
scor
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 112..253
score: 6.1
NoneNo IPR availableSMARTSM00212ubc_7coord: 111..253
score: 5.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG06G007790Csa2G138770Cucumber (Chinese Long) v2cuwcgB147
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG06G007790Watermelon (97103) v2wcgwmbB269
ClCG06G007790Watermelon (97103) v2wcgwmbB273
ClCG06G007790Wax gourdwcgwgoB503
ClCG06G007790Wax gourdwcgwgoB525
ClCG06G007790Watermelon (Charleston Gray)wcgwcgB160
ClCG06G007790Cucumber (Gy14) v1cgywcgB352
ClCG06G007790Cucumber (Gy14) v1cgywcgB452
ClCG06G007790Cucurbita maxima (Rimu)cmawcgB235
ClCG06G007790Cucurbita maxima (Rimu)cmawcgB326
ClCG06G007790Cucurbita maxima (Rimu)cmawcgB328
ClCG06G007790Cucurbita maxima (Rimu)cmawcgB565
ClCG06G007790Cucurbita maxima (Rimu)cmawcgB804
ClCG06G007790Cucurbita moschata (Rifu)cmowcgB221
ClCG06G007790Cucurbita moschata (Rifu)cmowcgB321
ClCG06G007790Cucurbita moschata (Rifu)cmowcgB325
ClCG06G007790Cucurbita moschata (Rifu)cmowcgB746
ClCG06G007790Cucurbita moschata (Rifu)cmowcgB799
ClCG06G007790Wild cucumber (PI 183967)cpiwcgB150
ClCG06G007790Wild cucumber (PI 183967)cpiwcgB255
ClCG06G007790Melon (DHL92) v3.5.1mewcgB388
ClCG06G007790Melon (DHL92) v3.5.1mewcgB441
ClCG06G007790Watermelon (97103) v1wcgwmB331
ClCG06G007790Watermelon (97103) v1wcgwmB344
ClCG06G007790Cucurbita pepo (Zucchini)cpewcgB143
ClCG06G007790Cucurbita pepo (Zucchini)cpewcgB144
ClCG06G007790Cucurbita pepo (Zucchini)cpewcgB294
ClCG06G007790Cucurbita pepo (Zucchini)cpewcgB561
ClCG06G007790Cucurbita pepo (Zucchini)cpewcgB788
ClCG06G007790Bottle gourd (USVL1VR-Ls)lsiwcgB029
ClCG06G007790Bottle gourd (USVL1VR-Ls)lsiwcgB343
ClCG06G007790Cucumber (Gy14) v2cgybwcgB138
ClCG06G007790Cucumber (Gy14) v2cgybwcgB230
ClCG06G007790Melon (DHL92) v3.6.1medwcgB378
ClCG06G007790Melon (DHL92) v3.6.1medwcgB437
ClCG06G007790Silver-seed gourdcarwcgB0221
ClCG06G007790Silver-seed gourdcarwcgB0936
ClCG06G007790Silver-seed gourdcarwcgB1046
ClCG06G007790Cucumber (Chinese Long) v3cucwcgB155
ClCG06G007790Cucumber (Chinese Long) v3cucwcgB254