ClCG06G007790 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG06G007790
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Ubiquitin conjugating enzyme E2, putative
Location	CG_Chr06 : 10045911 .. 10048465 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCATCCAATTTCCTTCTTTCCGGCGTTTCCGCCATGCTTCTTTCCCGTCTCCGCCGTTTCTTCTCTTCAAAACCCTCTTCTTCCTCCGCCTACCGCCGCCTCTACACTCCTCCTCTTCCGATCGCCCATACACACACACTCTATCCCCGGCCGCCGTCTCCTCTTCCAATCTACCACGATGATCGTAACTGGTCAGAATCTCCGCCGCCACAGCCGATTTCGATCGGCAACGGCGGAAGTGGAAATGAAGAAAAAACTAGTGCAATATATCGGATTGAGAACGAGAAGGAGGTGTCGACGGACTGCAGTTTCGAGCCGGTTGGCGCCGATATTAGGGAAAATGAAGAAAAAAGTAGTGCGATGTATCGGATTGAGAATGAATTGAGAGCGATGAACGAGGAGGCGGCGACGCACTGCAGTTTCGGGCCGGTGGGCGCCGATATTTTCCGGTGGGAAGGGGTTGTGATTGGGCCGGCTTGTTCTTGCTATGAAGGGGGTATTTTTCACCTTTCAATTCAATTTCCCTCCGACTACCCCTTAAGTCCTCCCCACATCAAGTTTCTAACCAAGGTTAGTTTTGTCCATTTGCCTCATTTTATATTTCTCTTATTATTATTTTTTTCTTCTTATTATTGACTGTTTGGGAATTGCATTTTGGAAAGCCTCACCTTATTCTGAAATTGTAATAAGCAAAATACTCTTCTTTTCTTTTACTTAAAAAAGAAATTATTTATTTATTTAATTTTTAAATTGTGCCCATGGAACAATTCCATTGGTGCTGACCGGGCTATAGCACCCATAATTTTTTCTTTTGTTTTAAAATAGACTTCAACTTTTTGGAAATTTCATTAATATCTTATTACATCCTAACAAAGATTAGAAAGAGAATGAAAACTAAAAGTAATAGTCATTTCAATTTTTTACAAAATAGGAAATCAAATCAATGTCCAATAAATGACAAAATCATCGATTTTGTTTCCTCTTGGTTTGGTTTCCAATTTTCCTTTCCTTTTCTCAAATTAAAATTTGGCTAGCCAAATTGGGGGGTTTTGTTTCTTACTAATAATAAAGTTCACCTTTCATCAAATATAATAACATACTAAAATTTCAAATAATATATAAAAAAATGGGTTCACTTCGATTCTGTCTTATTTTTCAATAAAAACCCAAGCTGAACTAAAGAGGTTTACGCTAAATACAAATCAATATTACCTAATTTTACACTAAAAAATTAAATCAAACTAATGGAGGCTTGGATTGATTCTATTTTTTTTGTTGCACTCTTGATGAAACTATTAGTACATTGTTTCAAAAATACTTTTGAATCGTTTATCTAATATACTTTATCATCTCTCCAAAGAGATATACTTTGGAAGAACGTTGCATTAATATTCTTAATGTTTTTTTAAAAAAGAAAATAAATAAAAAGTTCTCTTAGCATTAGTATTTGGATGGAAATCATTTATCTACACTTTATCACCTCTCTCTCCTTTGCTTCAATTTATGGTCTAACATGTTTTCATTTCTCATCATTTTTTCCTTCACTTCTTCAATATAAGAAATTTCTCCATCTCTCCTATTTTTTTTTTCTAAAATTTTAAATAAATCGAAAAAAACATTCCCATTTATGCGCATGCTGAAATATAGATATAAAAAGTTTCAACCCAAATAGCAAGTATAGAAACGAGAAACAACCAATTTGAAAACAACTTTTATTCACATAGATATATTTTTCTAAATAACTTCTTGAGAAATTTAAATGTGTACTTTCATTTATTAATTTTTGTAACAATGTGTTAAAAGAGAATAAAATACAAGTATAACATTTTAAAAAGTATTTGCAACTATAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTAAACCTTATATACCATCCATTAATATAATTAGGTATTGTCATATTTTATTTGAGAGTTAATTTACTCAACCGAGAAGGTTTAAGGTTTAAGGAGGAACACATTGATTTTTTCCAAAAATATTTTAAGTTTGTTTATCTTCAACCTTTGTTTTTCTTCTATTTCGTAGAGAAGGTAGCTTGTTGGGTAAGGTTTAGATTTGAAAATTCCAAAATAAGATGATTGAGTTTAAAGTATAAAGATGTTCGTATGGAGGAAAAGTAGTTCCATGTTAACAAACATATTGCTACGTATTTACTTTGTTTACATATATAAGAAATATATGTTTCTAATTGATCCCTGTCTTTACTAATAGAAACTCCCATGTGTGTGTGTTTATTGAAACAGATCTACCATCCAAATGTAGGGTTAGATGGAACCATTTACATAGACATATTGAATGGAAATTGGTCTTCAGCATTGACCGTTGAGAAACTTCTACTTTCAATATGCTCAATCCTTTCAAACCCAATTCCTCAAGGCTCCATTACCGAAGCTTCAACAATGTACCTCAATAGTTGGCTCAATTACAACAAGATTGCAAGAGAATGGACCAAAATATATGCAATGCCAAATTGATCTCATCACTACAACCAAAAC

mRNA sequence

TTCCCATCCAATTTCCTTCTTTCCGGCGTTTCCGCCATGCTTCTTTCCCGTCTCCGCCGTTTCTTCTCTTCAAAACCCTCTTCTTCCTCCGCCTACCGCCGCCTCTACACTCCTCCTCTTCCGATCGCCCATACACACACACTCTATCCCCGGCCGCCGTCTCCTCTTCCAATCTACCACGATGATCGTAACTGGTCAGAATCTCCGCCGCCACAGCCGATTTCGATCGGCAACGGCGGAAGTGGAAATGAAGAAAAAACTAGTGCAATATATCGGATTGAGAACGAGAAGGAGGTGTCGACGGACTGCAGTTTCGAGCCGGTTGGCGCCGATATTAGGGAAAATGAAGAAAAAAGTAGTGCGATGTATCGGATTGAGAATGAATTGAGAGCGATGAACGAGGAGGCGGCGACGCACTGCAGTTTCGGGCCGGTGGGCGCCGATATTTTCCGGTGGGAAGGGGTTGTGATTGGGCCGGCTTGTTCTTGCTATGAAGGGGGTATTTTTCACCTTTCAATTCAATTTCCCTCCGACTACCCCTTAAGTCCTCCCCACATCAAGTTTCTAACCAAGATCTACCATCCAAATGTAGGGTTAGATGGAACCATTTACATAGACATATTGAATGGAAATTGGTCTTCAGCATTGACCGTTGAGAAACTTCTACTTTCAATATGCTCAATCCTTTCAAACCCAATTCCTCAAGGCTCCATTACCGAAGCTTCAACAATGTACCTCAATAGTTGGCTCAATTACAACAAGATTGCAAGAGAATGGACCAAAATATATGCAATGCCAAATTGATCTCATCACTACAACCAAAAC

Coding sequence (CDS)

ATGCTTCTTTCCCGTCTCCGCCGTTTCTTCTCTTCAAAACCCTCTTCTTCCTCCGCCTACCGCCGCCTCTACACTCCTCCTCTTCCGATCGCCCATACACACACACTCTATCCCCGGCCGCCGTCTCCTCTTCCAATCTACCACGATGATCGTAACTGGTCAGAATCTCCGCCGCCACAGCCGATTTCGATCGGCAACGGCGGAAGTGGAAATGAAGAAAAAACTAGTGCAATATATCGGATTGAGAACGAGAAGGAGGTGTCGACGGACTGCAGTTTCGAGCCGGTTGGCGCCGATATTAGGGAAAATGAAGAAAAAAGTAGTGCGATGTATCGGATTGAGAATGAATTGAGAGCGATGAACGAGGAGGCGGCGACGCACTGCAGTTTCGGGCCGGTGGGCGCCGATATTTTCCGGTGGGAAGGGGTTGTGATTGGGCCGGCTTGTTCTTGCTATGAAGGGGGTATTTTTCACCTTTCAATTCAATTTCCCTCCGACTACCCCTTAAGTCCTCCCCACATCAAGTTTCTAACCAAGATCTACCATCCAAATGTAGGGTTAGATGGAACCATTTACATAGACATATTGAATGGAAATTGGTCTTCAGCATTGACCGTTGAGAAACTTCTACTTTCAATATGCTCAATCCTTTCAAACCCAATTCCTCAAGGCTCCATTACCGAAGCTTCAACAATGTACCTCAATAGTTGGCTCAATTACAACAAGATTGCAAGAGAATGGACCAAAATATATGCAATGCCAAATTGA

Protein sequence

MLLSRLRRFFSSKPSSSSAYRRLYTPPLPIAHTHTLYPRPPSPLPIYHDDRNWSESPPPQPISIGNGGSGNEEKTSAIYRIENEKEVSTDCSFEPVGADIRENEEKSSAMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSITEASTMYLNSWLNYNKIAREWTKIYAMPN

Homology

[Close]

BLAST of ClCG06G007790 vs. Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.9e-37
Identity = 71/146 (48.63%), Postives = 96/146 (65.75%), Query Frame = 1


Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI+ EL  +  +   HCS GPVG D+F W+  ++GP  S Y+GG+F L++ FP+DYP
Sbjct: 2   ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP I F TKIYHPN+  +G+I +DIL   WS ALTV K+LLSICS+L +P P    + 
Sbjct: 62  FKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           + + +Y +    YN+ AREWT+ YAM
Sbjct: 122 DIAQIYKSDKEKYNRHAREWTQKYAM 147

[Close]

BLAST of ClCG06G007790 vs. Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.9e-37
Identity = 71/146 (48.63%), Postives = 96/146 (65.75%), Query Frame = 1


Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI+ EL  +  +   HCS GPVG D+F W+  ++GP  S Y+GG+F L++ FP+DYP
Sbjct: 2   ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP I F TKIYHPN+  +G+I +DIL   WS ALTV K+LLSICS+L +P P    + 
Sbjct: 62  FKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           + + +Y +    YN+ AREWT+ YAM
Sbjct: 122 DIAQIYKSDKEKYNRHAREWTQKYAM 147

[Close]

BLAST of ClCG06G007790 vs. Swiss-Prot
Match: UB2D1_RAT (Ubiquitin-conjugating enzyme E2 D1 OS=Rattus norvegicus GN=Ube2d1 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.9e-37
Identity = 71/146 (48.63%), Postives = 96/146 (65.75%), Query Frame = 1


Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI+ EL  +  +   HCS GPVG D+F W+  ++GP  S Y+GG+F L++ FP+DYP
Sbjct: 2   ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP I F TKIYHPN+  +G+I +DIL   WS ALTV K+LLSICS+L +P P    + 
Sbjct: 62  FKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           + + +Y +    YN+ AREWT+ YAM
Sbjct: 122 DIAQIYKSDKEKYNRHAREWTQKYAM 147

[Close]

BLAST of ClCG06G007790 vs. Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.9e-37
Identity = 71/146 (48.63%), Postives = 96/146 (65.75%), Query Frame = 1


Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI+ EL  +  +   HCS GPVG D+F W+  ++GP  S Y+GG+F L++ FP+DYP
Sbjct: 2   ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP I F TKIYHPN+  +G+I +DIL   WS ALTV K+LLSICS+L +P P    + 
Sbjct: 62  FKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           + + +Y +    YN+ AREWT+ YAM
Sbjct: 122 DIAQIYKSDKEKYNRHAREWTQKYAM 147

[Close]

BLAST of ClCG06G007790 vs. Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.6e-36
Identity = 69/146 (47.26%), Postives = 95/146 (65.07%), Query Frame = 1


Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI  EL+ +  +    CS GPVG D+F W+  ++GP  S Y+GG+F L+I FP+DYP
Sbjct: 2   ALKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP + F T+IYHPN+  +G+I +DIL   WS ALT+ K+LLSICS+L +P P    + 
Sbjct: 62  FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E + +Y      YN++AREWT+ YAM
Sbjct: 122 EIARIYKTDREKYNELAREWTRKYAM 147

[Close]

BLAST of ClCG06G007790 vs. TrEMBL
Match: A0A0A0LI75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G138770 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.9e-68
Identity = 136/201 (67.66%), Postives = 158/201 (78.61%), Query Frame = 1


Query: 56  SPPPQPISIGNGGSGNEEKTSAIYRIENEKEVSTDCSFEPVGADIRENEEKSS-AMYRIE 115
           S  P P +  +     EEKTS    I+++KE   D S+         NEEKSS AMYRIE
Sbjct: 11  SQKPSPYTPTSPPVRMEEKTSWTRGIDHQKE---DISWG-------NNEEKSSVAMYRIE 70

Query: 116 NELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLSPPHI 175
           NEL++MNEE ATHCSFGPVG DIFRWEGVVIGPA SCYEGGIFH+SIQFPSDYP +PP I
Sbjct: 71  NELKSMNEEVATHCSFGPVGDDIFRWEGVVIGPAGSCYEGGIFHVSIQFPSDYPFTPPSI 130

Query: 176 KFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSITEASTMYL 235
            FLTKI+HPNV +DG+I +DILN NWSSALT+EKLLLSICSILSNPIP GS  EASTM+L
Sbjct: 131 NFLTKIFHPNVEVDGSIGMDILNENWSSALTIEKLLLSICSILSNPIPHGSTNEASTMFL 190

Query: 236 NSWLNYNKIAREWTKIYAMPN 256
           N+WL++N  A++WTK+YAMPN
Sbjct: 191 NNWLDFNDTAKQWTKLYAMPN 201

[Close]

BLAST of ClCG06G007790 vs. TrEMBL
Match: A0A0A0LI75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G138770 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.2e-50
Identity = 127/262 (48.47%), Postives = 154/262 (58.78%), Query Frame = 1


Query: 1   MLLSRLRRFFSSKPSSSSAYRRLYTPPLPIAHTHTLYPRPPSPLPIYHDDR-NWSESPPP 60
           M  SRLRR FS KPS        YTP  P               P+  +++ +W+     
Sbjct: 1   MFFSRLRRCFSQKPSP-------YTPTSP---------------PVRMEEKTSWTRGIDH 60

Query: 61  QPISIGNGGSGNEEKTS-AIYRIENE-----KEVSTDCSFEPVGADIRENEEKSSAMYRI 120
           Q   I  G   NEEK+S A+YRIENE     +EV+T CSF PVG DI          +R 
Sbjct: 61  QKEDISWGN--NEEKSSVAMYRIENELKSMNEEVATHCSFGPVGDDI----------FRW 120

Query: 121 ENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLSPPH 180
           E  +             GP G+                YEGGIFH+SIQFPSDYP +PP 
Sbjct: 121 EGVV------------IGPAGSC---------------YEGGIFHVSIQFPSDYPFTPPS 180

Query: 181 IKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSITEASTMY 240
           I FLTKI+HPNV +DG+I +DILN NWSSALT+EKLLLSICSILSNPIP GS  EASTM+
Sbjct: 181 INFLTKIFHPNVEVDGSIGMDILNENWSSALTIEKLLLSICSILSNPIPHGSTNEASTMF 201

Query: 241 LNSWLNYNKIAREWTKIYAMPN 256
           LN+WL++N  A++WTK+YAMPN
Sbjct: 241 LNNWLDFNDTAKQWTKLYAMPN 201

HSP 2 Score: 161.4 bits (407), Expect = 1.5e-36
Identity = 75/146 (51.37%), Postives = 99/146 (67.81%), Query Frame = 1


Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI  EL+ +  +  T CS GP+  D+F W+  ++GPA S YEGGIF L IQFP+DYP
Sbjct: 2   ALRRISKELKDLRLDPPTQCSAGPIKDDLFAWQATIMGPADSPYEGGIFFLEIQFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSI-T 228
             PP I F+TKIYHPN+ L G I +DIL G WS ALT+ K+LLSICS+L++P P   +  
Sbjct: 62  FKPPKISFMTKIYHPNINLSGHICLDILRGQWSPALTISKVLLSICSLLTDPNPDDPLCP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E +  Y      Y+++AREWT+ YAM
Sbjct: 122 EVARQYKTDRKKYDELAREWTQKYAM 147

[Close]

BLAST of ClCG06G007790 vs. TrEMBL
Match: I3MW74_ICTTR (Uncharacterized protein OS=Ictidomys tridecemlineatus PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.5e-36
Identity = 74/146 (50.68%), Postives = 99/146 (67.81%), Query Frame = 1


Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI  EL  +  +    CS GPVG D+FRW+  ++GP+ S Y+GG+F LSIQFPSDYP
Sbjct: 2   ALKRIHKELLDLARDPPAQCSAGPVGDDMFRWQAAIMGPSDSPYQGGVFFLSIQFPSDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP I F+T+IYHPN+   G I +DIL   WS ALT+ K+LLSICS+L +P P    + 
Sbjct: 62  FKPPKITFITRIYHPNINRSGNICLDILRSEWSPALTISKVLLSICSMLCDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E + +YL     Y+++AREWT+ YAM
Sbjct: 122 EIAKIYLKDRRKYDRVAREWTEKYAM 147

[Close]

BLAST of ClCG06G007790 vs. TrEMBL
Match: A2AFH2_MOUSE (Protein Ube2dnl2 OS=Mus musculus GN=Ube2dnl2 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.3e-36
Identity = 70/146 (47.95%), Postives = 102/146 (69.86%), Query Frame = 1


Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI+ EL A++++   HCS GPV  ++F W+  ++GP  S Y+GG+F LS+ FP++YP
Sbjct: 10  ALKRIQKELVAISQDPPAHCSAGPVAENMFHWQATIMGPEDSPYQGGVFFLSVHFPNNYP 69

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP + F+T++YHPN+  +G+I +DILN  WS ALT+ KLLLSICS+L +P P    + 
Sbjct: 70  FKPPKVTFITRVYHPNISKNGSICLDILNSMWSPALTISKLLLSICSLLCDPNPDDPLVP 129

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E + +Y      YN++AREWTK YAM
Sbjct: 130 EIAKVYRKDLREYNRLAREWTKRYAM 155

[Close]

BLAST of ClCG06G007790 vs. TrEMBL
Match: G3PRV4_GASAC (Uncharacterized protein OS=Gasterosteus aculeatus PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 5.6e-36
Identity = 71/146 (48.63%), Postives = 99/146 (67.81%), Query Frame = 1


Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI+ EL  +  +    CS GPVG D+F W+  ++GP  S Y+GG+F L+I FP+DYP
Sbjct: 2   ALKRIQKELHDLQRDPPAQCSAGPVGDDLFHWQATIMGPGDSPYQGGVFFLTIHFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP + F TKIYHPN+  +G+I +DIL   WS ALTV K+LLSICS+L +P P    + 
Sbjct: 62  FKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           + + MY N  + YNK+A++WT+ YAM
Sbjct: 122 DIAHMYKNDKVKYNKLAKDWTQKYAM 147

[Close]

BLAST of ClCG06G007790 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11)

HSP 1 Score: 144.4 bits (363), Expect = 9.4e-35
Identity = 67/146 (45.89%), Postives = 91/146 (62.33%), Query Frame = 1


Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A  RI  EL+ + ++  ++CS GPV  D+F W+  ++GP  S Y GG+F +SI FP DYP
Sbjct: 2   ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP + F TK+YHPN+  +G+I +DIL   WS ALT+ K+LLSICS+L++P P    + 
Sbjct: 62  FKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E + MY      Y   AR WT+ YAM
Sbjct: 122 EIAHMYKTDRSKYESTARSWTQKYAM 147

[Close]

BLAST of ClCG06G007790 vs. TAIR10
Match: AT5G56150.1 (AT5G56150.1 ubiquitin-conjugating enzyme 30)

HSP 1 Score: 143.7 bits (361), Expect = 1.6e-34
Identity = 66/146 (45.21%), Postives = 91/146 (62.33%), Query Frame = 1


Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A  RI  ELR +  +    CS GP G D+F+W+  ++GPA S + GG+F ++I FP DYP
Sbjct: 2   ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP + F TK+YHPN+  +G+I +DIL   WS ALTV K+LLSICS+L++P P    + 
Sbjct: 62  FKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E + +Y    + Y   A+ WT+ YAM
Sbjct: 122 EIAHIYKTDRVKYESTAQSWTQKYAM 147

[Close]

BLAST of ClCG06G007790 vs. TAIR10
Match: AT4G27960.2 (AT4G27960.2 ubiquitin conjugating enzyme 9)

HSP 1 Score: 142.9 bits (359), Expect = 2.7e-34
Identity = 66/146 (45.21%), Postives = 91/146 (62.33%), Query Frame = 1


Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A  RI  EL+ + ++  T CS GPV  D+F W+  ++GP+ S Y GG+F ++I FP DYP
Sbjct: 32  ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 91

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP + F TK++HPN+  +G+I +DIL   WS ALT+ K+LLSICS+L++P P    + 
Sbjct: 92  FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 151

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E + MY      Y   AR WT+ YAM
Sbjct: 152 EIAHMYKTDKNKYESTARTWTQKYAM 177

[Close]

BLAST of ClCG06G007790 vs. TAIR10
Match: AT5G53300.1 (AT5G53300.1 ubiquitin-conjugating enzyme 10)

HSP 1 Score: 142.5 bits (358), Expect = 3.6e-34
Identity = 66/146 (45.21%), Postives = 91/146 (62.33%), Query Frame = 1


Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A  RI  EL+ + ++  T CS GPV  D+F W+  ++GP+ S Y GG+F ++I FP DYP
Sbjct: 2   ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP + F TK++HPN+  +G+I +DIL   WS ALT+ K+LLSICS+L++P P    + 
Sbjct: 62  FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E + MY      Y   AR WT+ YAM
Sbjct: 122 EIAHMYKTDKNKYESTARSWTQKYAM 147

[Close]

BLAST of ClCG06G007790 vs. TAIR10
Match: AT5G41700.4 (AT5G41700.4 ubiquitin conjugating enzyme 8)

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-33
Identity = 67/147 (45.58%), Postives = 91/147 (61.90%), Query Frame = 1


Query: 109 AMYRIENELRAMNEEAATHCSF-GPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDY 168
           A  RI  EL+ + ++  T C F GPV  D+F W+  ++GPA S Y GG+F ++I FP DY
Sbjct: 2   ASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61

Query: 169 PLSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-I 228
           P  PP + F TK++HPN+  +G+I +DIL   WS ALT+ K+LLSICS+L++P P    +
Sbjct: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121

Query: 229 TEASTMYLNSWLNYNKIAREWTKIYAM 254
            E + MY      Y   AR WT+ YAM
Sbjct: 122 PEIAHMYKTDRAKYEATARNWTQKYAM 148

[Close]

BLAST of ClCG06G007790 vs. NCBI nr
Match: gi|659114818|ref|XP_008457245.1| (PREDICTED: ubiquitin-conjugating enzyme E2 D1-like [Cucumis melo])

HSP 1 Score: 269.2 bits (687), Expect = 7.2e-69
Identity = 126/153 (82.35%), Postives = 139/153 (90.85%), Query Frame = 1


Query: 103 NEEKSS-AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSI 162
           NEEKSS AMYRIENEL+AMN+E ATHCSFGPVG DIFRWEG+VIGPACSCYEGGIFH+SI
Sbjct: 51  NEEKSSVAMYRIENELKAMNKEVATHCSFGPVGDDIFRWEGIVIGPACSCYEGGIFHVSI 110

Query: 163 QFPSDYPLSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPI 222
           QFPSDYP +PP I FLTKI+HPNV LDG+I IDIL  NWSSALT+EKLLLSICS+LSNPI
Sbjct: 111 QFPSDYPFTPPSIHFLTKIFHPNVELDGSIKIDILYENWSSALTIEKLLLSICSVLSNPI 170

Query: 223 PQGSITEASTMYLNSWLNYNKIAREWTKIYAMP 255
           PQGS  EASTM+LN WLN+N IAR+WTK+YAMP
Sbjct: 171 PQGSTNEASTMFLNDWLNFNDIARQWTKLYAMP 203

[Close]

BLAST of ClCG06G007790 vs. NCBI nr
Match: gi|659114818|ref|XP_008457245.1| (PREDICTED: ubiquitin-conjugating enzyme E2 D1-like [Cucumis melo])

HSP 1 Score: 137.9 bits (346), Expect = 2.5e-29
Identity = 105/260 (40.38%), Postives = 128/260 (49.23%), Query Frame = 1


Query: 1   MLLSRLRRFFSSKPSSSSAYRRLYTPPLPIAHTHTLYPRPPSPLPIYHDDRNWSESPPPQ 60
           ML SRLRR F+ K SS S     YTP              P P+P+     +W      Q
Sbjct: 1   MLFSRLRRCFAPKRSSYS-----YTPA-------------PPPVPMIKKT-SWPCGNIDQ 60

Query: 61  PISIGNGGSGNEEKTSAIYRIENE-----KEVSTDCSFEPVGADIRENEEKSSAMYRIEN 120
                  G+  E+ + A+YRIENE     KEV+T CSF PVG DI          +R E 
Sbjct: 61  KDDDIIRGNNEEKSSVAMYRIENELKAMNKEVATHCSFGPVGDDI----------FRWEG 120

Query: 121 ELRAMNEEAATHCSFGPV-GADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLSPPHI 180
            +       A  C  G +    I         P    +   IFH +++            
Sbjct: 121 IVIG----PACSCYEGGIFHVSIQFPSDYPFTPPSIHFLTKIFHPNVE------------ 180

Query: 181 KFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSITEASTMYL 240
                       LDG+I IDIL  NWSSALT+EKLLLSICS+LSNPIPQGS  EASTM+L
Sbjct: 181 ------------LDGSIKIDILYENWSSALTIEKLLLSICSVLSNPIPQGSTNEASTMFL 203

Query: 241 NSWLNYNKIAREWTKIYAMP 255
           N WLN+N IAR+WTK+YAMP
Sbjct: 241 NDWLNFNDIARQWTKLYAMP 203

HSP 2 Score: 267.3 bits (682), Expect = 2.7e-68
Identity = 136/201 (67.66%), Postives = 158/201 (78.61%), Query Frame = 1


Query: 56  SPPPQPISIGNGGSGNEEKTSAIYRIENEKEVSTDCSFEPVGADIRENEEKSS-AMYRIE 115
           S  P P +  +     EEKTS    I+++KE   D S+         NEEKSS AMYRIE
Sbjct: 11  SQKPSPYTPTSPPVRMEEKTSWTRGIDHQKE---DISWG-------NNEEKSSVAMYRIE 70

Query: 116 NELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLSPPHI 175
           NEL++MNEE ATHCSFGPVG DIFRWEGVVIGPA SCYEGGIFH+SIQFPSDYP +PP I
Sbjct: 71  NELKSMNEEVATHCSFGPVGDDIFRWEGVVIGPAGSCYEGGIFHVSIQFPSDYPFTPPSI 130

Query: 176 KFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSITEASTMYL 235
            FLTKI+HPNV +DG+I +DILN NWSSALT+EKLLLSICSILSNPIP GS  EASTM+L
Sbjct: 131 NFLTKIFHPNVEVDGSIGMDILNENWSSALTIEKLLLSICSILSNPIPHGSTNEASTMFL 190

Query: 236 NSWLNYNKIAREWTKIYAMPN 256
           N+WL++N  A++WTK+YAMPN
Sbjct: 191 NNWLDFNDTAKQWTKLYAMPN 201

[Close]

BLAST of ClCG06G007790 vs. NCBI nr
Match: gi|449442475|ref|XP_004139007.1| (PREDICTED: ubiquitin-conjugating enzyme E2 5A-like [Cucumis sativus])

HSP 1 Score: 206.1 bits (523), Expect = 7.5e-50
Identity = 127/262 (48.47%), Postives = 154/262 (58.78%), Query Frame = 1


Query: 1   MLLSRLRRFFSSKPSSSSAYRRLYTPPLPIAHTHTLYPRPPSPLPIYHDDR-NWSESPPP 60
           M  SRLRR FS KPS        YTP  P               P+  +++ +W+     
Sbjct: 1   MFFSRLRRCFSQKPSP-------YTPTSP---------------PVRMEEKTSWTRGIDH 60

Query: 61  QPISIGNGGSGNEEKTS-AIYRIENE-----KEVSTDCSFEPVGADIRENEEKSSAMYRI 120
           Q   I  G   NEEK+S A+YRIENE     +EV+T CSF PVG DI          +R 
Sbjct: 61  QKEDISWGN--NEEKSSVAMYRIENELKSMNEEVATHCSFGPVGDDI----------FRW 120

Query: 121 ENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLSPPH 180
           E  +             GP G+                YEGGIFH+SIQFPSDYP +PP 
Sbjct: 121 EGVV------------IGPAGSC---------------YEGGIFHVSIQFPSDYPFTPPS 180

Query: 181 IKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSITEASTMY 240
           I FLTKI+HPNV +DG+I +DILN NWSSALT+EKLLLSICSILSNPIP GS  EASTM+
Sbjct: 181 INFLTKIFHPNVEVDGSIGMDILNENWSSALTIEKLLLSICSILSNPIPHGSTNEASTMF 201

Query: 241 LNSWLNYNKIAREWTKIYAMPN 256
           LN+WL++N  A++WTK+YAMPN
Sbjct: 241 LNNWLDFNDTAKQWTKLYAMPN 201

HSP 2 Score: 161.8 bits (408), Expect = 1.6e-36
Identity = 73/146 (50.00%), Postives = 98/146 (67.12%), Query Frame = 1


Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           AM RI  EL+ +  +    CS GPVG D+F W+  ++GP+ S Y GG+F LSI FP+DYP
Sbjct: 2   AMKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATILGPSESAYSGGVFFLSIHFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGS-IT 228
             PP + F TKIYHPN+  +G+I +DIL   WS ALT+ K+LLSICS+L++P P    + 
Sbjct: 62  FKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E + +Y  +   YN +AREWTK YAM
Sbjct: 122 EIARLYKTNRTKYNDLAREWTKKYAM 147

[Close]

BLAST of ClCG06G007790 vs. NCBI nr
Match: gi|720057631|ref|XP_010274033.1| (PREDICTED: ubiquitin-conjugating enzyme E2 D1-like isoform X3 [Nelumbo nucifera])

HSP 1 Score: 161.4 bits (407), Expect = 2.1e-36
Identity = 74/142 (52.11%), Postives = 98/142 (69.01%), Query Frame = 1


Query: 112 RIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLSP 171
           R+  EL A  ++  +HCS GPVG DIF W+GV++GP C+ YEGG+F LSI  P DYP SP
Sbjct: 55  RLLKELDATKKDPLSHCSCGPVGNDIFEWQGVIMGPECTPYEGGLFFLSIHIPEDYPNSP 114

Query: 172 PHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSITEAST 231
           P IKF TK+ HPN+  DGTI++DIL   W+  LT+E +LLSICS+L++P    S    + 
Sbjct: 115 PEIKFKTKVIHPNIDEDGTIHLDILWDRWTPVLTIEWVLLSICSLLADPNADISFNPIAI 174

Query: 232 MYLNSWLNYNKIAREWTKIYAM 254
           +Y N+   YNK  +EWT+ YAM
Sbjct: 175 LYRNNREEYNKKTKEWTRKYAM 196

[Close]

BLAST of ClCG06G007790 vs. NCBI nr
Match: gi|350644836|emb|CCD60467.1| (ubiquitin conjugating enzyme E2, putative [Schistosoma mansoni])

HSP 1 Score: 161.4 bits (407), Expect = 2.1e-36
Identity = 75/146 (51.37%), Postives = 99/146 (67.81%), Query Frame = 1


Query: 109 AMYRIENELRAMNEEAATHCSFGPVGADIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 168
           A+ RI  EL+ +  +  T CS GP+  D+F W+  ++GPA S YEGGIF L IQFP+DYP
Sbjct: 2   ALRRISKELKDLRLDPPTQCSAGPIKDDLFAWQATIMGPADSPYEGGIFFLEIQFPTDYP 61

Query: 169 LSPPHIKFLTKIYHPNVGLDGTIYIDILNGNWSSALTVEKLLLSICSILSNPIPQGSI-T 228
             PP I F+TKIYHPN+ L G I +DIL G WS ALT+ K+LLSICS+L++P P   +  
Sbjct: 62  FKPPKISFMTKIYHPNINLSGHICLDILRGQWSPALTISKVLLSICSLLTDPNPDDPLCP 121

Query: 229 EASTMYLNSWLNYNKIAREWTKIYAM 254
           E +  Y      Y+++AREWT+ YAM
Sbjct: 122 EVARQYKTDRKKYDELAREWTQKYAM 147

The following BLAST results are available for this feature:

BLAST of ClCG06G007790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UB2D1_BOVIN	1.9e-37	48.63	Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1	[more]
UB2D1_HUMAN	1.9e-37	48.63	Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1	[more]
UB2D1_RAT	1.9e-37	48.63	Ubiquitin-conjugating enzyme E2 D1 OS=Rattus norvegicus GN=Ube2d1 PE=1 SV=1	[more]
UB2D1_MOUSE	1.9e-37	48.63	Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1	[more]
UBCD1_DROME	1.6e-36	47.26	Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=2 SV...	[more]

BLAST of ClCG06G007790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI75_CUCSA	1.9e-68	67.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G138770 PE=4 SV=1	[more]
A0A0A0LI75_CUCSA	5.2e-50	48.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G138770 PE=4 SV=1	[more]
I3MW74_ICTTR	2.5e-36	50.68	Uncharacterized protein OS=Ictidomys tridecemlineatus PE=3 SV=1	[more]
A2AFH2_MOUSE	3.3e-36	47.95	Protein Ube2dnl2 OS=Mus musculus GN=Ube2dnl2 PE=3 SV=1	[more]
G3PRV4_GASAC	5.6e-36	48.63	Uncharacterized protein OS=Gasterosteus aculeatus PE=3 SV=1	[more]

BLAST of ClCG06G007790 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G08690.1	9.4e-35	45.89	ubiquitin-conjugating enzyme 11	[more]
AT5G56150.1	1.6e-34	45.21	ubiquitin-conjugating enzyme 30	[more]
AT4G27960.2	2.7e-34	45.21	ubiquitin conjugating enzyme 9	[more]
AT5G53300.1	3.6e-34	45.21	ubiquitin-conjugating enzyme 10	[more]
AT5G41700.4	1.4e-33	45.58	ubiquitin conjugating enzyme 8	[more]

BLAST of ClCG06G007790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114818\|ref\|XP_008457245.1\|	7.2e-69	82.35	PREDICTED: ubiquitin-conjugating enzyme E2 D1-like [Cucumis melo]	[more]
gi\|659114818\|ref\|XP_008457245.1\|	2.5e-29	40.38	PREDICTED: ubiquitin-conjugating enzyme E2 D1-like [Cucumis melo]	[more]
gi\|449442475\|ref\|XP_004139007.1\|	7.5e-50	48.47	PREDICTED: ubiquitin-conjugating enzyme E2 5A-like [Cucumis sativus]	[more]
gi\|720057631\|ref\|XP_010274033.1\|	2.1e-36	52.11	PREDICTED: ubiquitin-conjugating enzyme E2 D1-like isoform X3 [Nelumbo nucifera]	[more]
gi\|350644836\|emb\|CCD60467.1\|	2.1e-36	51.37	ubiquitin conjugating enzyme E2, putative [Schistosoma mansoni]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000608	UBQ-conjugat_E2
IPR016135	UBQ-conjugating_enzyme/RWD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030509	BMP signaling pathway
biological_process	GO:0034138	toll-like receptor 3 signaling pathway
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0035666	TRIF-dependent toll-like receptor signaling pathway
biological_process	GO:0007179	transforming growth factor beta receptor signaling pathway
biological_process	GO:0038095	Fc-epsilon receptor signaling pathway
biological_process	GO:0034142	toll-like receptor 4 signaling pathway
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
biological_process	GO:0002223	stimulatory C-type lectin receptor signaling pathway
biological_process	GO:0061418	regulation of transcription from RNA polymerase II promoter in response to hypoxia
biological_process	GO:0070936	protein K48-linked ubiquitination
biological_process	GO:0051437	positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
biological_process	GO:0000122	negative regulation of transcription from RNA polymerase II promoter
biological_process	GO:0007094	mitotic spindle assembly checkpoint
biological_process	GO:0000090	mitotic anaphase
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0000151	ubiquitin ligase complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G007790.1	ClCG06G007790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 112..247 score: 1.4
IPR000608	Ubiquitin-conjugating enzyme E2	PROFILE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 111..223 score: 30
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	G3DSA:3.10.110.10		coord: 102..253 score: 2.4
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	unknown	SSF54495	UBC-like	coord: 106..253 score: 4.07
None	No IPR available	unknown	Coil	Coil	coord: 103..123 scor
None	No IPR available	PANTHER	PTHR24068	FAMILY NOT NAMED	coord: 112..253 score: 6.1
None	No IPR available	SMART	SM00212	ubc_7	coord: 111..253 score: 5.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG06G007790	Csa2G138770	Cucumber (Chinese Long) v2	cuwcgB147

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG06G007790	Wild cucumber (PI 183967)	cpiwcgB150
ClCG06G007790	Wild cucumber (PI 183967)	cpiwcgB255
ClCG06G007790	Melon (DHL92) v3.5.1	mewcgB388
ClCG06G007790	Melon (DHL92) v3.5.1	mewcgB441
ClCG06G007790	Watermelon (97103) v1	wcgwmB331
ClCG06G007790	Watermelon (97103) v1	wcgwmB344
ClCG06G007790	Cucurbita pepo (Zucchini)	cpewcgB143
ClCG06G007790	Cucurbita pepo (Zucchini)	cpewcgB144
ClCG06G007790	Cucurbita pepo (Zucchini)	cpewcgB294
ClCG06G007790	Cucurbita pepo (Zucchini)	cpewcgB561
ClCG06G007790	Cucurbita pepo (Zucchini)	cpewcgB788
ClCG06G007790	Bottle gourd (USVL1VR-Ls)	lsiwcgB029
ClCG06G007790	Bottle gourd (USVL1VR-Ls)	lsiwcgB343
ClCG06G007790	Cucumber (Gy14) v2	cgybwcgB138
ClCG06G007790	Cucumber (Gy14) v2	cgybwcgB230
ClCG06G007790	Melon (DHL92) v3.6.1	medwcgB378
ClCG06G007790	Melon (DHL92) v3.6.1	medwcgB437
ClCG06G007790	Silver-seed gourd	carwcgB0221
ClCG06G007790	Silver-seed gourd	carwcgB0936
ClCG06G007790	Silver-seed gourd	carwcgB1046
ClCG06G007790	Cucumber (Chinese Long) v3	cucwcgB155
ClCG06G007790	Cucumber (Chinese Long) v3	cucwcgB254
ClCG06G007790	Watermelon (97103) v2	wcgwmbB269
ClCG06G007790	Watermelon (97103) v2	wcgwmbB273
ClCG06G007790	Wax gourd	wcgwgoB503
ClCG06G007790	Wax gourd	wcgwgoB525
ClCG06G007790	Watermelon (Charleston Gray)	wcgwcgB160
ClCG06G007790	Cucumber (Gy14) v1	cgywcgB352
ClCG06G007790	Cucumber (Gy14) v1	cgywcgB452
ClCG06G007790	Cucurbita maxima (Rimu)	cmawcgB235
ClCG06G007790	Cucurbita maxima (Rimu)	cmawcgB326
ClCG06G007790	Cucurbita maxima (Rimu)	cmawcgB328
ClCG06G007790	Cucurbita maxima (Rimu)	cmawcgB565
ClCG06G007790	Cucurbita maxima (Rimu)	cmawcgB804
ClCG06G007790	Cucurbita moschata (Rifu)	cmowcgB221
ClCG06G007790	Cucurbita moschata (Rifu)	cmowcgB321
ClCG06G007790	Cucurbita moschata (Rifu)	cmowcgB325
ClCG06G007790	Cucurbita moschata (Rifu)	cmowcgB746
ClCG06G007790	Cucurbita moschata (Rifu)	cmowcgB799