ClCG06G006130 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCTTCTTCTTCCTCCTCTCTTCATTCGAACTCTCTGTTTCTCTGTTTTCCATCAATTTCCTGCCCATGGCTTCTTCCTTGGACTGCATCCTTTTCGGTAACTTCTTCTTCTTCTTCTTCTTCTCTTCTACCTTCATTTCCATGATTTCAGATTTCAGATTTTGTAACTCTGTTTTTTCACAGATTTGGATGACACTCTTTACCCCTTCAACACTGGAATTGCCGATGCTGTCAATAAAAACATCGAAGGTTTCAGAACTCTGTTTTGTTGGATTTTCTTTAAAGTTTAAATTTATGGGTTCAAGATTTTGAGTAGTAGTGTTGGTTTTTGACAGATTTCCTTATCCAGAAATGTGGAATTCCAGAAATAAAAGCTCCCATTCTTCGGAAACAGCTTTTCGAAACATATGGCGGCAACCTGGCTAGTCTGCGAGTAATTTCCCTAATTAACCATTTTAATCAATGTTGTTACATTTTAATATAAAGTTTCAATTTTAAACAAGTACATATTTCCGCTAAATTCTATAAAATATCCATAAACAGTGTAAATTATGTCAAAAATATCCTTAAACAAAATTTCAAACAATACTCTTTCTTTTAGATTTGGATAGAAATTGTTTTTGAGTCAAAAGTACTACTCAGTTTTCAAAAGTTTTAAATTTTGACTCTCGAATGGAGTGTTAGGACGGAAAAACCCATTAAATAGTAAATGGAAAGATTCATTAGATAATGAAGTTGATCTTTGAATAGGAAATGTTTCTCTTCTGTATATATTTATAGTCGATTATTTATGGTTTTAGTATGTTTGAAGGGAGATTTTAATTTTGAAATTTTGTGAGACCTTATAGGATTTGTGTTTTTAACTTAAAGTTTCAATTTTTATCTTGGTTGATGAAAAAATTGATGTAAGAATTCGACAAATGAGGATATTTCTGCTTGAAAAAATGATGAAATTTATATAATTTGTTTTACAATTGGTTTTTTTCGAACCCAAAAAACTTCAAATAAATTGATCACTATATATACTAACTGTGGGAGCATTTTTTTAATTTTTTTTAATTTTAGAGTTAATTTCGTTACGGGATATTAATAGTTTTTGTTCATATATTTACGATAAAGGTATCTTTTTAATTTTTTTTTTTTTCAATTAAAGTTATTTTTCATACGTTTAAAAGTTCAAGGATATTTTTGAAACAAAACATTAACAAGTTCAATCTTACTAACAATAAGGTATTTTTGAACTCTTCTAGATATTTAAGGGTATTTTTGCAACTTTTGAAAGTTCATGAGTATTTTTTATCCAATATACAAAGTTCAAGGGCATCTTTTATTAATTTAGCCTTTTTTTTTCTTTTATCAAATTTGAACTAATGTACATGTTTAGTTAAACAAGATTTTTAAACTCATGTCATGAATTCAATAGATCCAAAAATTTCTAAAAATAAGTCTCTTACAAACACTTTTCACACACAACATTTCATTCTAATCTTTCTAGATTCTCATATTTAAATTTGCCGATTGACCCAAAAGCTTAAGCTAACGGGGGAAGGCAAATTTAATATCATATCATCTAACACTCCCACTCACTTGTGAGCTTGAAATATGAAAAAGATCCAACAAGTGGAAATGAATTTTAATTGGGAGGAAACAACAAAGTAAGGGCTTGAGCACGAGACCTTCCAAATTTAATATCATATCATCTAACACTCCCATTCACTTGTGAGCTTGAAATATGAAAAAGATCCAACAAGTGGAAATGAATTTTAATTGGGAGGAAACAACAAAGTAAGGGCTTGAGCACGAGACCTTCCAAATTTAATATCATATCATCTAACACTCCCATTCACTTGTGAGCTTGAAATATGAAAAAGATCCAACAAGTGGAAATGAATTTTAATTGGGAGGAAACAACAATGTAAGGGCTTGAGCACGAGACCTTCCAAATTTAATATTATATCATCTAACCGCTTTTGTGTCACTCGCGCTTTTTTCTCTCATCTCAAATTTAGAAAATACAAAAAGAAAATTTAACTAGAATGAGCACACTCAAACTTAAAAGTATTTTTAATTGGAATAAATAAAAACAAAAGTGACATACCATATCTAATTACAAGAATTTAAAAAATACAAAAAAATCCAAATAAGAATAAGAGAAAGAGAGGGAGGATGGCTAGGGAGGAGAGAGAAAATAAGAAAGATAGAGAGGAAAGGAGGAGAGAAGGAAGAGGGAGGAGATCATAAAAATTAAAAAATATTTTTGTTTTCCCAACTCATCTTGTCATATTATCCATCTACCCATATTTTATATTTAAATTTAATGGTTATATTAGTAGAGTAACCTTTTAAACCTATTTTTGAAAAACTCAAAGATTAAAATGATCCATTTAAAATATTAAAAATTAAATTATTGAAAGTTTAGGGACCAAAAAAGTATTTCTCTTTTTTTAAAAAAACGTCTCTACTGTTTAATTTTTTTTATTTGGTTTAGTGAAGACCAAAGTAGTTTTATCTCAACATCATTCATTTTCTTATGCAATCTCATGTCTCTCTTTAAAGATACAAAAGAGGTGGTTAGTTTTTTAAAACAAAAAAAGCATGACCGACACAATTGTAGAATTGATTGACCGATTTCAGTTCAATCGATTCTAGCGGTTTGTTTTGAACACCACTACAATCTCTCAGGAAGAGTTGTAATTTTCTAAACTTAAAAACAAAATAATTTTATTCATATTTTTCAATAGTTTTTATACTATAGTTTATATTATAGTGTGATCAAGCTATAAAATATTTATTACCCTAATAGTTGATATAAAGAAAAAAACACATCATAAGGTTTGAATCTACTTAAAAATAGCTAAGATACTCGCACATAATTTCAACCTAATCATTTAGGTGATATTTCTCGCTATTTACTCAGATTTGTTCTATTATTTGTAATACTCATCACAATCTCTATTAGAGAACTACTATCCTATCCATGACTTTTTCCTTTTTTTCTTTTTTCTTTTTGTATATTTACTTACAGGCATTGGGCTATGACATCCATCCAGATGATTTCCATGGGTAAGCCAAAAATTTAGAAATATAAGGAGAAAAAAGAAAAAGAAAAACATTGGTTTTGAAAAATCAACTATAACTTTTGTTTTGATGTGTTGGTTTCTCAGTTTCGTGCATGGCAGATTGGCATACGAGTGGATCAAACCAGACTTTAAGCTCCGACAGATCTTATTCACTATTCCTCTACGAAAAATCGTAAGTAGTGAAGACTAAAAACTAATGTAATTGTTTTAAATTAATTAATGGATATCGAGCACAAAACATTAGTACATAATTAGTAAAATTTCAAGAATAAAAGTGTAAATTTTGAAGCTTAAAGATCAAGCAAAACAAAACTCAAACGTAACCTTTTGAATCTTACATAACCAAATGATAATCGAAATCAAAATTCAAAAGTAAAAATGTAACCTCCTTTTGTAACTCAAAGGCTATATGAAAACTAGATTCAAAATTTAAGTATATAGACGGAATTTTTTTTTGAAAAAATAATTAATATTGATGATCACTTATTGAATCTGTAGATATTTACAAATTCTGATATAAAGCATGCAACCGAAGTGCTTGCCCGACTCGGCCTAGAGGATTGCTTCGAGAAGATCATATGTTTCGAGACGATGAACCCGAACCTTTTCAAGGCAACTCGGTCAAATGAGGTCCCGGTCCTCCTAAAGCCATCGATGGATGCTATAAGAATCGCTCTTGACGTCGCCAACGTCGACCCCCGTCGAACGGTAGGTCATGGCGGAATAAAATTTGTGATATTTTGTGACAAAAGTGAGTCTCAGCCTCGATGTGGTTTGATGATTTGTGTTGTCGTTGTTTGCAGTTGTTTCTTGACGACAATGTGAGCAACATCGCTGCTGGAAAAGCCCTCGGCCTCCGAACCGTTTTGGTAAGAAATTTCCTTTCCACTGTCTTTTAGATTTCTATTTTACCTTTTAATTCTTTTTTCCAAATATTTATTTTAGTTTTTTACTTTACAGTTGTGAGAGTAACTTTAAAAGATTAATTTAACTAACCTAATCTATTAGTTAACATTTTTTTGGTACAATCATGAATCAGCATCATATTAATATTAGAGTAAGGGTTATGTGTTTCAAACTACTTTCATATAATTTTTTCATTACTAATTAATATTGATATTTACCTTTTAGGTTAAGTTATAAAAAAATATCATTCAATTTAACCATATATTTCAAAAATATCTTTATATTTTCAAATTTTGCAATATTACCCATAAACTTTCATAAACATTTTAAGAATACCCTTGTAGTTGAAATGTTTTAGAATTTGGATAAAGATTGAGATATGAAATGGTGTGTAGTAGGTGACAGAGAACTAAAATTTGAATCATTACATCATTTTAGGTCATCAGCACACGATTCTAACTCCTCATTTTTTTTTCAAAAATTCTAAAGAATTTGGTAGTTTTGAAACGTTTATGAAAGTTGAAGGGTAATATTGAAACTTCTGAAAGAATGAGGTATTTTTTAAACAAAGAAAAAAGTTCAAGGGTATTTATTATAATTTAGCCTACTTTTTAGATAGAGAGTGTTAAAATTATCGTTATTCATCAACTTAAACTTTTAGGTTCAATAGTAATTTAAGGCTTTTAAGAAATAACATTTTTTTCTCTCATTTTATATTAGTTGTGAATGAAATATATGAATGATATGATTTGACATTTGAACAGTATGCTGAAGTTGCATATATGTATATATATAGTCAAAATGAGTATAGTTTCACTAACATTAAAGCTTTCATAACCAATTTTGAAGTTAGAGGTTTAGTTTTCCACCAAACATATTGTAAAAAGAAAAACAACTAAAAATAGTTTTATTATTTTTCTAAATTTTATTTCTTAAAATTTCATTAATTTAAGATAAGGTAATTGTTTTAAATGTCAAAGTTGCAGGAAATATTTTCAAATATAGAAAAATATCACTATCTACCAATGATAGACAGTAATAGACATTGATAGTACCAATGTCTATCAATGTCTATTACTATCAAGTACCAACTATCATAGATGATAGTAGTCTATCACTATCTATTACTTATAGATACAGAAATTTTACTATATTTATAAATATGTTGACTCATTTTGCTACGATTGAAAACAACCATTTTTAACGTATTCATTTTAAAGATTCGAATATTGAAATACAGTAAATTTGATGATTGAAGGATGAAAACGTGATTTTTTAAAAAATAGTGTAATCTAATCACATCTTTTTCTTTTCCAACTTTGTGCTGGTTTGTTGTGTTACACACGTTGTCTTTTTTAGGATGAAAAATGATAAAGAATATGTTCGATTAATTTTTCTAAGGAAAATTAAAAATGAAATTGCTTAATTATTACTTTGTAAATAATCTTAATATTATAAGTGATTTGCAATTGTCTAAAAGATTCCCTTCCTTCTTTAATGTGAAAGCCAAGGTTGGAGATATCAATTTCGATTGATGAAAATTTTGAGAAAAATATATATTTAAAATGACACGTGACACATCTTTGTTTGTTATAAGAAAACATCATCATCAATTGGGAAGAAAATTATAAAACTAATAAAAAATAAAATATAGAGAAAATTGCAAAACCCACCCTTGAAATTTGGTGGAAGTTGCAATTACACATTCAAACTTTCAATTGTAGAAATTGGGCCCTACTTGTACAAAGGTATGGTGGTAGTTGCAAATTATCTAATGATGTATCAAATACTAAGTTGAAAGAGTATGCATTATCATTATACTTGAAAATTTTCCTCATTCAATTAGCATAAAATTTATATTATCGACTTCGAGATTAGAGTTTTGATTTTTTACACATATGATCAGAAAAAATCACCCTATTCTTATTATCCAAAAGAGTGGAGCCATGCCATCAATATCCACTCGAAACATGATTTACAATTACATGTAAATTACAATAGAAAATCTTGTTAATAGCGTGAATTTGCATAAACAGTAAAAAAATTATATATGTATCTTTAAATGTAGTAACATTTTTTATATTTTTAGAATATTTATTTCATGATTTTTTGAGATACATGTTTAGTTCAGGAGGATTTTTTTATTTTTAGAATACATGTTAAATTACAAATTTAGTTTTATATATATAGTTTCTTTCTTATTTATATATATATATAGTTTCTTTTTTATATATATTTATGAACTTATATTTAATATATCTCTTTAAGTTTTTGAAATACATATTTATAAATTTTTAATATTTTATTTAATATGTCTCTTAACTTTTAATTTTGTATCTAGAAGTTGTTTATATGTTTTTTTTTTAAATTAAAAATTTTAGAAAAGGTTTGATCTAATATATATAATTAATATACCTAAACTTAGTTTTGTTTAGTAAGTACATTTGTGATTAAAAAACTGTTGAATATGTCAACAACTTATTAAATAGAAAATTGAAATTTTAAGAACTTACTAGATATTTTTTTACGTTCAATGACTAATTCAACGCAAAATTGAAGGTTTAGAAACCAAATAGATATAAAATTAAAAATAGGGGTGTACATGGATTGGGTTGGGAGAGTTTTTCGGACCAACCTGAAAATTTTGGGTTAGCTAGTCAGGTTGGCTAATCAAATTCGGGTAGGGTTGTCACGTTAATTACTTTTTTTTATTAATTTAAAATACTTAAATTTATTCATAACACATAACTAATAACCAAATTGGATTGGGTAGTCCATGTTGTTCAGGACTCAACCCCAACCCAACAAAAGTAGAAAACAAAAATTAACCCAATTCAACTTGGGAACAAAACTAACTCAACCCAACTTATACAGTTTGGGTAGAATAATTCAAGTTGTTCAGTAGTTGTCGAGTCATTTAAACAATTTTAATTGAAAGTTTAACTGCTAAAATAGTAATTTAATTTAAATTACAGGGTGATGTCATTAAATGAAGATGGGAAAGTTAGTGAAAAGTACAGAGGCAGATTATGTGGTGGAGACCGTGCATGATCTGGTACAAACCGTTGCAGAGATATGGGTGAGTGCAGAATCAAACGGTGATGATGAAACACGCTAA GCTTCTTCTTCCTCCTCTCTTCATTCGAACTCTCTGTTTCTCTGTTTTCCATCAATTTCCTGCCCATGGCTTCTTCCTTGGACTGCATCCTTTTCGATTTGGATGACACTCTTTACCCCTTCAACACTGGAATTGCCGATGCTGTCAATAAAAACATCGAAGATTTCCTTATCCAGAAATGTGGAATTCCAGAAATAAAAGCTCCCATTCTTCGGAAACAGCTTTTCGAAACATATGGCGGCAACCTGGCTAGTCTGCGATTTCGTGCATGGCAGATTGGCATACGAATATTTACAAATTCTGATATAAAGCATGCAACCGAAGTGCTTGCCCGACTCGGCCTAGAGGATTGCTTCGAGAAGATCATATGTTTCGAGACGATGAACCCGAACCTTTTCAAGGCAACTCGGTCAAATGAGGTCCCGGTCCTCCTAAAGCCATCGATGGATGCTATAAGAATCGCTCTTGACGTCGCCAACGTCGACCCCCGTCGAACGTTGTTTCTTGACGACAATGTGAGCAACATCGCTGCTGGAAAAGCCCTCGGCCTCCGAACCGTTTTGATGGGAAAGTTAGTGAAAAGTACAGAGGCAGATTATGTGGTGGAGACCGTGCATGATCTGGTACAAACCGTTGCAGAGATATGGGTGAGTGCAGAATCAAACGGTGATGATGAAACACGCTAA ATGGCTTCTTCCTTGGACTGCATCCTTTTCGATTTGGATGACACTCTTTACCCCTTCAACACTGGAATTGCCGATGCTGTCAATAAAAACATCGAAGATTTCCTTATCCAGAAATGTGGAATTCCAGAAATAAAAGCTCCCATTCTTCGGAAACAGCTTTTCGAAACATATGGCGGCAACCTGGCTAGTCTGCGATTTCGTGCATGGCAGATTGGCATACGAATATTTACAAATTCTGATATAAAGCATGCAACCGAAGTGCTTGCCCGACTCGGCCTAGAGGATTGCTTCGAGAAGATCATATGTTTCGAGACGATGAACCCGAACCTTTTCAAGGCAACTCGGTCAAATGAGGTCCCGGTCCTCCTAAAGCCATCGATGGATGCTATAAGAATCGCTCTTGACGTCGCCAACGTCGACCCCCGTCGAACGTTGTTTCTTGACGACAATGTGAGCAACATCGCTGCTGGAAAAGCCCTCGGCCTCCGAACCGTTTTGATGGGAAAGTTAGTGAAAAGTACAGAGGCAGATTATGTGGTGGAGACCGTGCATGATCTGGTACAAACCGTTGCAGAGATATGGGTGAGTGCAGAATCAAACGGTGATGATGAAACACGCTAA MASSLDCILFDLDDTLYPFNTGIADAVNKNIEDFLIQKCGIPEIKAPILRKQLFETYGGNLASLRFRAWQIGIRIFTNSDIKHATEVLARLGLEDCFEKIICFETMNPNLFKATRSNEVPVLLKPSMDAIRIALDVANVDPRRTLFLDDNVSNIAAGKALGLRTVLMGKLVKSTEADYVVETVHDLVQTVAEIWVSAESNGDDETR
BLAST of ClCG06G006130 vs. TrEMBL
Match: M5XRI4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009986mg PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 7.4e-63 Identity = 128/236 (54.24%), Postives = 160/236 (67.80%), Query Frame = 1
BLAST of ClCG06G006130 vs. TrEMBL
Match: A0A0A0KEU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G423990 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 4.0e-61 Identity = 136/238 (57.14%), Postives = 159/238 (66.81%), Query Frame = 1
BLAST of ClCG06G006130 vs. TrEMBL
Match: W9RYD4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012369 PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 6.9e-61 Identity = 133/234 (56.84%), Postives = 157/234 (67.09%), Query Frame = 1
BLAST of ClCG06G006130 vs. TrEMBL
Match: B9RSQ4_RICCO (Protein SSM1, putative OS=Ricinus communis GN=RCOM_0677770 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 3.8e-59 Identity = 124/237 (52.32%), Postives = 157/237 (66.24%), Query Frame = 1
BLAST of ClCG06G006130 vs. TrEMBL
Match: F6HDN8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03190 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 3.8e-59 Identity = 127/236 (53.81%), Postives = 159/236 (67.37%), Query Frame = 1
BLAST of ClCG06G006130 vs. TAIR10
Match: AT2G32150.1 (AT2G32150.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 223.8 bits (569), Expect = 9.8e-59 Identity = 119/233 (51.07%), Postives = 151/233 (64.81%), Query Frame = 1
BLAST of ClCG06G006130 vs. TAIR10
Match: AT5G59480.1 (AT5G59480.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 138.3 bits (347), Expect = 5.4e-33 Identity = 81/254 (31.89%), Postives = 123/254 (48.43%), Query Frame = 1
BLAST of ClCG06G006130 vs. TAIR10
Match: AT5G02230.1 (AT5G02230.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 136.0 bits (341), Expect = 2.7e-32 Identity = 90/262 (34.35%), Postives = 119/262 (45.42%), Query Frame = 1
BLAST of ClCG06G006130 vs. TAIR10
Match: AT5G59490.1 (AT5G59490.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 133.7 bits (335), Expect = 1.3e-31 Identity = 82/240 (34.17%), Postives = 125/240 (52.08%), Query Frame = 1
BLAST of ClCG06G006130 vs. TAIR10
Match: AT3G62040.1 (AT3G62040.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 121.7 bits (304), Expect = 5.3e-28 Identity = 61/131 (46.56%), Postives = 88/131 (67.18%), Query Frame = 1
HSP 2 Score: 118.2 bits (295), Expect = 5.8e-27 Identity = 73/241 (30.29%), Postives = 121/241 (50.21%), Query Frame = 1
BLAST of ClCG06G006130 vs. NCBI nr
Match: gi|596298386|ref|XP_007227483.1| (hypothetical protein PRUPE_ppa009986mg [Prunus persica]) HSP 1 Score: 248.4 bits (633), Expect = 1.1e-62 Identity = 128/236 (54.24%), Postives = 160/236 (67.80%), Query Frame = 1
BLAST of ClCG06G006130 vs. NCBI nr
Match: gi|645236016|ref|XP_008224536.1| (PREDICTED: uncharacterized protein C24B11.05 [Prunus mume]) HSP 1 Score: 242.7 bits (618), Expect = 5.8e-61 Identity = 126/236 (53.39%), Postives = 158/236 (66.95%), Query Frame = 1
BLAST of ClCG06G006130 vs. NCBI nr
Match: gi|449444767|ref|XP_004140145.1| (PREDICTED: uncharacterized protein LOC101214793 [Cucumis sativus]) HSP 1 Score: 242.7 bits (618), Expect = 5.8e-61 Identity = 136/238 (57.14%), Postives = 159/238 (66.81%), Query Frame = 1
BLAST of ClCG06G006130 vs. NCBI nr
Match: gi|703143430|ref|XP_010108012.1| (hypothetical protein L484_012369 [Morus notabilis]) HSP 1 Score: 241.9 bits (616), Expect = 9.9e-61 Identity = 133/234 (56.84%), Postives = 157/234 (67.09%), Query Frame = 1
BLAST of ClCG06G006130 vs. NCBI nr
Match: gi|225432622|ref|XP_002281854.1| (PREDICTED: uncharacterized protein LOC100263185 [Vitis vinifera]) HSP 1 Score: 240.7 bits (613), Expect = 2.2e-60 Identity = 127/235 (54.04%), Postives = 159/235 (67.66%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |