ClCG06G006070 (gene) Watermelon (Charleston Gray)

NameClCG06G006070
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr06 : 6914911 .. 6916887 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCCACGTGCGACTGAAGGAGGGAAAACGTAGGGTAGTTGGATATTATCTACTGAAGACTTTTTTAATAAAGGTCCTCCGTTATTCATGATGCCACGTGTCGGTCAAACAGTGGATGGTCTTTTCATTGCACCACTCCCCTGGTGTTGTGTTTTTCAACTTTGGAATTTCTCATTTTACTTTTAAGTCCTCACTTTTTAATACATTATAATAATTATAATACAATATTTTTGTTTTTGTTTTTTTTTTTTTAATGGTTTTGAAAATATATGATTAGTTTAGGTGATATTTGTTTTGATTGGGAAAAATGTGAATTTTCTTTTGCTAAAGTACAATTGTATACTTTAAATGTAAAAAAGTAAAAAGTAGATTTGAATTTACTTATAACACAATGTTCTTAATTCATACTTTATGACTTGAGGTATTCAACAATTAAGTTTTGTTGTTCGAACGTTAAAAATAAATTTACTTGCATTGTATGTTTAAGTCATTGGTTATTTATATGTTTAAGGCATTGCTAATTACATTAAATTTTGTTTTATAATAGATAATATTGTTTTTAGGTTGAATAATTGTCATATTATTTTATTAATATAAATTATTACTTCTATTTGTGGTAGGAAAAAACTTTTTTTGGAAAATTATTATAAATAGAAAAAATATCAAATTATTTATAAATATTTTGGTTAATTTTGCTATATTTGAAAATAATCTTTTTAGTAAATACTAGAATTTTAACCACACACTTCTCGATCATTATCACATACTTCATACCGGCTAAAGTTCCATTTTTATATTAGGAAAAAAGCTAATACTCTTAAATTAATTATTTATAAAAAATTAAACCATGATTCAAGTTCCTGATTATTCTGAGGAACGAGATTTGTTTCATAAAGGCTTTCCCTAATTTAGATTACTTCAGAACTTGGATTGATTCTATCCTATGTGATTTTGGAGTTGGAGTTGTTCTAGTGGCCTTGAGGTTGGTGCTGTTTCGGGCTCTCCCAGCCACTTTCTCGTTTGTATACTTCACCTGAAAGATGTTGGAAGTTGAATGTGGATGTTGCTTGGTCTGCTGATAGAGGGACGGGTAGTCTTAGGTGGCTTGTTCGGGACCATGACGGGTGTGCTATTTTAGGAGGCTGTAAATTCATCTCTAAAGGTATTTATATGAGCCTTCTAGAAGTCGAAGCCATTCTAGAGGGGCTAAGGGTGCTTGTTGGGGCGTGGTCAGGTCCTATCACCTGTTGTGAGGTGAAGTTTGATGCTCTGGAGGTAATCAGTTCGAGACCATGACAGGTGTGCTATTATGGGAGGCTTTAAATTCATCTCTAAAGGTCTTTATATGAGCCTTCTAAAAGTCGAAGCTATTCTAGAGGGGCTGAGAGTGCTTGGGGCGTGGGGTCGGGTCCTATCATCTGTTGTTGGAGGTGAAGTCTGATGCTCTGGAGGTCATCAAGCTGCTAAATAGAGAGGCGTTTTCTTATGCTGCAATTGATGTCCTTATAGAGGATATACTGTCCTTATTGAGTTTTTTTGTCATTGTCCTTGTAAGGAGAACAAAGTGGTCCATTAGATTGTTGTTTGGCATCTTCCTTGGAATACTCTTTGATCTGGAAAGATGTTTTTAAAATACTCTGCTCCCGATTCTTAATGATAAGATTGATAGGGAATAATGAACCACTACTCTATCATGGCAACAAATTATTACACACATTTCTTAAAACAGAACATATTATTAAACACGAAAAGCTAAAAGTTTATAAACCAATTAGCTAGATACTTTTTAAGGTTTAAAGTCTCTTAAATAGAATTTAAAAGTTACTATAAATTATAATTTCATTTCAAAATTTTATCTGTTCATGTTTATTTAATGTAAGTTTAAAAAGTTTAAAATTACAAACTTTTGCCTTGTGATATGCAGTACAATTTGCCCATTGGCTTTTTATATTTAAATTTTGCTCTAACCCACTAA

mRNA sequence

ATGACCCACGTGCGACTGAAGGAGGGAAAACGTAGGGTAGTTGGATATTATCTACTGAAGACTTTTTTAATAAAGCCACTTTCTCGTTTGTATACTTCACCTGAAAGATGTTGGAAGTTGAATGTGGATGTTGCTTGGTCTGCTGATAGAGGGACGGGTAGTCTTAGGTGGCTTGTTCGGGACCATGACGGGTGTGCTATTTTAGGAGGCTGTAAATTCATCTCTAAAGGTATTTATATGAGCCTTCTAGAAGTCGAAGCCATTCTAGAGGGGCTAAGGGTGCTTGTTGGGGCGTGGTCAGGTCCTATCACCTGTTGTGAGGTGAAGTTTGATGCTCTGGAGTGCTTGGGGCGTGGGGTCGGGTCCTATCATCTGTTGTTGGAGGTGAAGTCTGATGCTCTGGAGGTCATCAAGCTGCTAAATAGAGAGGCGTTTTCTTATGCTGCAATTGATGTCCTTATAGAGGATATACTGTCCTTATTGAGTTTTTTTGTCATTGTCCTTTACAATTTGCCCATTGGCTTTTTATATTTAAATTTTGCTCTAACCCACTAA

Coding sequence (CDS)

ATGACCCACGTGCGACTGAAGGAGGGAAAACGTAGGGTAGTTGGATATTATCTACTGAAGACTTTTTTAATAAAGCCACTTTCTCGTTTGTATACTTCACCTGAAAGATGTTGGAAGTTGAATGTGGATGTTGCTTGGTCTGCTGATAGAGGGACGGGTAGTCTTAGGTGGCTTGTTCGGGACCATGACGGGTGTGCTATTTTAGGAGGCTGTAAATTCATCTCTAAAGGTATTTATATGAGCCTTCTAGAAGTCGAAGCCATTCTAGAGGGGCTAAGGGTGCTTGTTGGGGCGTGGTCAGGTCCTATCACCTGTTGTGAGGTGAAGTTTGATGCTCTGGAGTGCTTGGGGCGTGGGGTCGGGTCCTATCATCTGTTGTTGGAGGTGAAGTCTGATGCTCTGGAGGTCATCAAGCTGCTAAATAGAGAGGCGTTTTCTTATGCTGCAATTGATGTCCTTATAGAGGATATACTGTCCTTATTGAGTTTTTTTGTCATTGTCCTTTACAATTTGCCCATTGGCTTTTTATATTTAAATTTTGCTCTAACCCACTAA

Protein sequence

MTHVRLKEGKRRVVGYYLLKTFLIKPLSRLYTSPERCWKLNVDVAWSADRGTGSLRWLVRDHDGCAILGGCKFISKGIYMSLLEVEAILEGLRVLVGAWSGPITCCEVKFDALECLGRGVGSYHLLLEVKSDALEVIKLLNREAFSYAAIDVLIEDILSLLSFFVIVLYNLPIGFLYLNFALTH
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG06G006070.1ClCG06G006070.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13456RVT_3coord: 41..94
score: 5.

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG06G006070Melon (DHL92) v3.6.1medwcgB209
ClCG06G006070Melon (DHL92) v3.6.1medwcgB380
ClCG06G006070Melon (DHL92) v3.6.1medwcgB437
ClCG06G006070Silver-seed gourdcarwcgB0073
ClCG06G006070Silver-seed gourdcarwcgB0112
ClCG06G006070Silver-seed gourdcarwcgB0318
ClCG06G006070Silver-seed gourdcarwcgB0589
ClCG06G006070Silver-seed gourdcarwcgB0729
ClCG06G006070Cucumber (Chinese Long) v3cucwcgB254
ClCG06G006070Cucumber (Chinese Long) v3cucwcgB505
ClCG06G006070Cucumber (Chinese Long) v3cucwcgB592
ClCG06G006070Watermelon (97103) v2wcgwmbB269
ClCG06G006070Watermelon (97103) v2wcgwmbB273
ClCG06G006070Watermelon (97103) v2wcgwmbB275
ClCG06G006070Watermelon (97103) v2wcgwmbB277
ClCG06G006070Wax gourdwcgwgoB500
ClCG06G006070Wax gourdwcgwgoB526
ClCG06G006070Wax gourdwcgwgoB535
ClCG06G006070Watermelon (Charleston Gray)wcgwcgB027
ClCG06G006070Watermelon (Charleston Gray)wcgwcgB160
ClCG06G006070Watermelon (Charleston Gray)wcgwcgB174
ClCG06G006070Cucumber (Gy14) v1cgywcgB092
ClCG06G006070Cucumber (Gy14) v1cgywcgB333
ClCG06G006070Cucurbita maxima (Rimu)cmawcgB328
ClCG06G006070Cucurbita maxima (Rimu)cmawcgB745
ClCG06G006070Cucurbita maxima (Rimu)cmawcgB804
ClCG06G006070Cucurbita moschata (Rifu)cmowcgB323
ClCG06G006070Cucurbita moschata (Rifu)cmowcgB325
ClCG06G006070Cucurbita moschata (Rifu)cmowcgB746
ClCG06G006070Cucurbita moschata (Rifu)cmowcgB799
ClCG06G006070Cucurbita moschata (Rifu)cmowcgB804
ClCG06G006070Wild cucumber (PI 183967)cpiwcgB255
ClCG06G006070Wild cucumber (PI 183967)cpiwcgB510
ClCG06G006070Wild cucumber (PI 183967)cpiwcgB593
ClCG06G006070Cucumber (Chinese Long) v2cuwcgB483
ClCG06G006070Cucumber (Chinese Long) v2cuwcgB562
ClCG06G006070Melon (DHL92) v3.5.1mewcgB217
ClCG06G006070Melon (DHL92) v3.5.1mewcgB390
ClCG06G006070Watermelon (97103) v1wcgwmB315
ClCG06G006070Watermelon (97103) v1wcgwmB324
ClCG06G006070Watermelon (97103) v1wcgwmB344
ClCG06G006070Cucurbita pepo (Zucchini)cpewcgB144
ClCG06G006070Cucurbita pepo (Zucchini)cpewcgB239
ClCG06G006070Cucurbita pepo (Zucchini)cpewcgB294
ClCG06G006070Cucurbita pepo (Zucchini)cpewcgB788
ClCG06G006070Bottle gourd (USVL1VR-Ls)lsiwcgB029
ClCG06G006070Bottle gourd (USVL1VR-Ls)lsiwcgB202
ClCG06G006070Bottle gourd (USVL1VR-Ls)lsiwcgB344
ClCG06G006070Cucumber (Gy14) v2cgybwcgB230
ClCG06G006070Cucumber (Gy14) v2cgybwcgB446
ClCG06G006070Cucumber (Gy14) v2cgybwcgB522