ClCG06G004220 (gene) Watermelon (Charleston Gray)

Overview
NameClCG06G004220
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionNovel plant snare, putative
LocationCG_Chr06 : 4829040 .. 4836638 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCAAATTAATTCATTTAATCAATTTTCCCCCATTCCCATTGCCAGCCCATCCTATCTCACGCTTTCTCTCTCTTCCTTTCCCTACATCTTCATCTTTTCTCTTCCTATCTCCATTTTCGTCAATCCCAGTTCTTCATTTTTCTTTTCAATTTCCTTCTGCGTGTTCTTCGATTCTCTAGTTTTCACCATTTCCCCCTTTCATTACATCCACTTTACTCCCACTATCTCTCACTAGGGTTCCTTTGGATTTTCCCCTCTTCCTTCTTCCTTTACTTGGATTAAATGCTATATCTAATTCTATAGATGCAATAAACTGTCCAGATCGTCGCAACTTACGCTTCCGGCGAAATGGCCAGCGGCTTGCAGATGAGTCCTCAGTTAGAGCAGATCCATGGGGAAATTCGTGACAATTTTCGGGCTCTTTCGTATGTTTTATTCTCCTTACTCTCGATTTTTGTGCTTTTTTTTGTGTTATTATCAGTTCCTTGTGCTTGTGTTATCTGTTTTTCTATCTATGGCTGCTCTTGTTTTGTGTAAAACGCATGGCCAATTCACTGTAGATGTTCTCCTATTCGATTGTGTAATTTTTTTTGGTTTAGCGGGTTTGGAAGTCTTTGGTGACACTAGTTGAGAGACTCGTGTCCCTTCCTCATTCTTATTCCTCGTCGGAGTTTCCTACATGCTTGATATTATTAATACTTAATACTTGTCCGGGAATTCTGGGCTCCTACCTTCAGTAAACCTCCTTTGGGGTTTGGGAGAAGGAGAAGTTAGGGTTCATTTGAGAATGTTTTTTGTTTTTAATATTATGCTGATTTACTAAAACTACTTTTTTTTTTTTTTTTTTTTTTTGGTTCGTAATATAATAAGAAAAATATAGTTTTGAAAAGCCCTTGTTTTATTTTTGAAATTGAATGATTTCTGAACTTCTTTTTAAAAAGTGAAAAATTAAACCACAATAATGTAGGCGAGCTTAGCTTTTTTAGGAACAGAAAACATTAAACAAAGATGTGGTGGAGTGGAATCTTAAGTAGATTAAGTACTGTGAATCCTTGTAGCTAAGTTTGTGTGTGGTTCTCTAAATTTATCTATTAAATTTAAATTGGATGCCACTAGCTCTATGAGTACCTTAGAGCGCAAGTCTTTGAAGTTGATACCATTTACTCAATATCGTCCTGAACTTAGTCCTAAGTTTGGTGGTTTCTATGGTAATGCTACAATCACACTTGAATTTGACCCCATTTATTCAATATCAGCATTATGGTGGTTATCTTATTTATCAGCATTATGATATCCTCTTTGATTTCCACTGTCTACCAGAAATGGGTTCCAAAGACTGGATAAGATCAAAGATTCCAGTAGACAAAGTAAGCAGTTGGAGGAGCTCACAGGAAAGATGAGGGAATGTAAAAGGTATGGAAAAACTAGCGCAAGATTCTTCGCACATGTGGGAGCGTCTCTTGTTGCATTATAAAGAAAATTGCAGTTTGTGCCATGCGTACACAGTCTCTGCAATAAATACTAGACTGAGAAAAATTAAAGCTCAATTGACATGCTCTCTAGTTTATTAATGTTCTTTGTAAATATTTATTCACAAAATGGAGCTGTTCTTGCAGATTAATAAAAGATTTTGACCGTGAAATCAAGGAGGAAGAGAGTAAAAATCCACCGGAAGTGAATAAGCAGCTCAATGATGAGAAGCAATCAATGGTTAGTTCATTGTTGTTTTATCTTTCAAGCTTAAGACATGAATGCATCTAATGAAGGAAGTACTTGTACAAAGTTTGACGGTTAGCAGCTTAAGTGAGCCAATTTGCTGTTATTTGATGTTTCAATGGAGGCTGCCAAATCATAAACTAGAGTGTGAATTGATTTGTAAAATTAATGAATAATGTATCATAACATATTCAGTATTATAATACACATCTTTTGATCTCCTTTCATGTGTCTTTGGATTCGAGATTCATAGGGTAATGAGATGCTTGAGAATATTACATGCTGTATGCATCAGAGCTGTCTAAAAGAATATTTATCCGTTGGGATAACTTTGTTAACAGAACTGATGGGTGTCAGGCCTATTATTTACATATAGAGAAGGTCAAAGTGTGCCATAGCACTGTACAAAACTACCTAGGCAATTCAACAGGGATGGTTCTCTCCTGCACACGAGTACCTACCCGAAAGATGTCCTTCCTCATGACCCTTGGACAGCTTATAATCCCCCCCAACTAAGAAACAAACAAGGCTAGTTTCCTTTTTTCACATTAACAATTGGGAGGCCCAGCATTACTTCTGGGTACAAGACACCTTATCTCGAAGGTTAAACTCTGAGAATGGGTGATAATTAGTTTCTAGTAGGTCCCAGAATGCAAGTCTTTCCATTCAGTCAGCAATTCCCAATTATCCAAGTTGGGTCTTCTACAAATAGTGAATAGGTGAATAACGAGGATTGATTGAGTTGGGTTCTACCCTACACAGTTTTTGGGGTTGAAAGATTGTCCAACTATAACAAGTTAACAACCTTACTAGATAATGAACCCAACCCAACATGAAATATTTGGGTTGGATTGTTAATTTTGCTTAAAAAATAGAAAACAGTGAAGATGATAATCTTTTAACATATTTAGTTACTTATTTCCAAATATAGAATTAAGATTAGTAACTTAGTGCAATTCTTATATATTCTAAAATTATACTTCAAGAGTTAAGGAACTATTTTCTTAAATTATATCAAAGAAATTATTGGATGAAATATCAAAGAATCGAACAATTCAAATCATTTGTCATTCAAAATAGTCATTTGAACAGAGGCATCATACATTGTCTATTATTTGTTGTCAACAACCTTGGTCATAATTTTAGAAAATATTTTAGGTTTTTATATTCATGCTGGATAGAGTACTGATTTGAACCTGAAGCACAAAATGTAGTTTTTTGTATTTATTTATTGTTAATGTATAATGTGAGATATCCCTGAGTGTTTTCATTTCTAACTGCTCTGGGCTTCCTTATGTTCAAGATTCAAGAGCATTGAAAGGATGGAGAGTTGTGGGATATATATATGAACAGACAGAAATGTACATTTCTAATTGCTCTTTGAGTTACATGTATCAGTTGTTGATATTGTTTTAAATATTTCTCATTGGAAACCTGTATTTACAATGGTTTACAATTTAATTGATATTGTACTTATTACAATATTTTCATCTGCAGATCAAGGAGCTGAATTCATTTGTTGCATTGAGGAAAACGTAAGTCCCCCCCCCCCCCCCCCCTTTGTTCCCCAATATGGTACAAGTTAAATATATCATTTAGTAGTGAATGAGTTCTTAGCAAAATAATAATAATAATAAAATTATTATTTTTTCTTTTTGCTAAGAAATAAATTTCACTGATCTAGGAAATTTACAAAAAAAACAAATGAGTTATAAAAGATTTCTCCTATTAGTGAAAAGGGATGAGAGATTTCTCTAATTGGTCAAAAGGGATGAGACTTGAGAGACTATAAGAGCTATAGAAAGACGTGCATTTGCACCACAACATAGCTAGAAAGATAATATGTTATAAAAACTATCAAAAGTGCTTTCCTTTTTTGTTGAAGAGGCGGTAAAGTATTTTTGTTTCAGTTTCTAGGGTGTGGGTGAAGAAATATATATCACCTGCCGTTGACCTTTTTTTCATTCAAAAGGCAATAAGCCAGACAGAACAACATAAGGGACAAAGAGTTAAGGTGTCCCTTTTCCCCAAGAAAGGGTTACAAAAAGACCCTCACAAGTCAAATCTAGATTGAAGGTGTGAATAGAGTAGTTACCAAAAGAAAAAAACTTATGTTGGCCCTTCCAATTAGAGGTCATAAACCGTACAAGATCACAAGAATTACTTTTATCTGGGAAAACAACATGAGTAATAGTTTCTTGCAATCAAATGGATTTTCTATGTGAATGATGAGACGTAAATTGTTGGTTTTTATTTTGATAGCGAAAGTGGCTGTCAAATGATGAAAGAAATGCAAGGAAGAGGGGTGGGTATCCATAATATATGAAAAGGTGCATCGGTGCGGTAAAAGGAAATATATATACACACACATATACATATATAAAAAGAATTATAATATGATAGGACGTGGAGGGTCATCTATGTTTTTAGATGTAAATCAGAAACCAAGTTTTCCATTTTTTAACTGGGAGGGTAGAAGCTTTAAGAAATTTGGGGGAATTCAGGTGGTTTACTAAACAGATTGAAGAAGTGAATGGTACAATTCTGGATTTCCTAATAAAGCAAATAGTTAGCTAGATATTGATTATCCATCCATCAGAGGAATTCTCTTTAAAATATAATACCATAGTGGCAATGAAAAGAGGGGTTGTAAAAAGTTATATTACCGAGGTATATGGAAAGGGAAGTGCTGAAGAAAGTAAAAAAATCTGCTTGGATGTAGTGTCAGAGCTGCAGACAAAATTGAAGCAAAGGCAAGTATTACAAAAGGATGATAAGGCTTATTTAGTTCACTGAGCACTTTCATGTAAAAGAGAGACAGGGAAGGAGGAGGGTATGTGATAAAAGGTCTTTGCTAGATAGAGAAGGTGGAAAACATTTATTTATTGTTTTGAGTCGAAAATATGGCTTTAGATGATCAGAAGGAGGAGGGTATGTGATAAAAGGTCTTTGCTAGATAGAGAAGGTGGAAAACATTTATTTATTGTTTTAAGTCGAAAATATGGCTTTAGACGATCAAAGTTCTACTTTGAGGTTTATTACTGAAAAGAAACAATAGAACGTACAAAGTGATTGGAAGCAATTGGGTTGATGTTATTTGTCTCACCTAGTATACCTCTCATTGAATAACTGAAAAGTTCAGAAGTATATATACAAGTATATTTCTACTTAAAGTTTACAGATAAGCACTTCCCTTCTCCTTGTTTATCCTACCAAATGCTTTCTTTCAGAATCCCTTGGGAAGATGGGGACAGAAAGGTCTATGTAAAAGTAAATCCCTACTCAAAGTGAACAAATAAGCACTCAGATCCTAGTCACTTGTCACATGGCTTTGTAATTGATTTTCCCTTCTAATTTACTTATTGGAAGTGTTCTTTGTTTTTCTCGAACAGGTGAGTGGGGGAATCATTACTTTGGTCAAACAATGTCACTTTATTAATGACTAGTTTTTCCTACTAGAAAAAGGGATAAAAAGGTGTAACAACTGAGTCAGTTAGATTTCGATCTTGTGCTAATGTATGTTGTAATGCACTATGAAAACATGGTTTCTCATATTGAAAAAAAATGCTGTCAAGATGCTGGAATCGTTAGTTCCCCTTTTCTCAATGATTGAATGTGGTTCACATAATTCAGCATATTCAGTGGTTTGTCCTATCAGCATATTGGAATCAAATTGCTTGAGGTGTGAGTTCCCTAATTTTTTTATTTTTTTATTTTTTTATTGCTGAATGAATTACAGGTATATGAATAGTCTTGGTAATAAAAGGGTTGAGCTATTTGATGAGGGAGGTGTAAGTGAACCTACAGCTGATGATAATGTTCGGATGGCCTCATGTAAGCTATATTTTCCATAGTGTTTAACCTAAACAATTCTATGTTTATTCAACTTCTTTTTCAGCCTTTGACTAAAATAAGGGTGTAGTGACAAAATAGTATCTTCATGCTCCCTTTGTAATTGTGTACCTTTTTTTTTCTAATAAGGTAGTAATTAGTAAAGCAAGCTGTAAGATGATAATATTAAATTTGTCTTCACCCATAAGCTTAAACTTTTGGGTCAATTGGCAATTTAATAGGGTATCAAGTCAGGTTGGTTCAAGAGGTCCTGTGTTCAAACAGTTGCACTGTTGTTTCCTCCCCAATTAAAATTGATTTCCACTTATTGGATTTTCTTCATAATTCAAGCCCACAAGTGAGGGGAATGCTAGATGATATAATTAAATTTGCCTTCACCCACTAGCTTAAGCTTTTGGGTCAATTGACAATTTAACCCAAGCAATTGAAGATAAAGTTGTTAAGCAGCTTCTTATTTTATATGCTTGGAATTCCAGGAATATCTATTTTTCTCATTCTATTGCCATGGCTTTGTGCTGTAGCAATGACAAATCAAGAACTTATAGATGCTGGGAAGAAGACAATGGATGAAACCGATCAGGCTATTGAACGCACGCAAAAGGTGAAGAACGAATTACTTGAAACAGGTGATTTTATCATTACTAGCCCCTTTATTCCAATGCTAAACTTCTATCCGTAGGTGGTTGAACAAACTATTGAAGTGGGAACTCAAACTGCTGTTACATTAAAAGGCCAAGTATGTTTGACGTTGAAATTTCACCTCATGGTTAAAAATATATTACCTATCTGACCTGATTACTAGAATTCCCCACTCTTAATTTTTCTCAATTAAAATTTCAGACTGAGCAAATGGGCCGTATAGTAAATGAGCTTGACACAATTAATTTTTCAATTAAGAAGGCTTCCCAGCTTGTGAAAGAAATTGGCAGACAGGTAAGTCTACCTTATGGCCCCGAACCCCCCACCCCAAAATAATAAACGATTTAAATTGAAATTTTGATCCATATAGTTTGGAGAAAGAATTTAGTGTATATAGTTTATAATTAGAATTTATTTCCTATGTTTAGACAAAATTCTCATAAATAGTCCCTACGTTAGGGCCTATTTATGAGGATTTTATCAAACCATAGGAATTATTATATTATACTCTTTGGATATTTCATCCATCAACGAAATGTTTCTTATCCAAAAAAAGTTTTATCGAACCCTATGAACTAAATTCTAACTTCTAAAACCATAAAAACTAAATTCTAATTTTTTTCAAACCATAGGACCAAATTTATAATTTAACCTAAAATAAAAATAAAAATAATAAACCTTTTGGTTGTTTTTTACTGGGACTAATCTCCCCTCCCCCTCTTTGGAAAGGTTGCTACAGATAAATGCATCATGCTGTTTCTGTTCCTAATTGTCTGTGGAGTAATAGCCATTATTGTAGTTAAGGTAAACTCTGCAGTTCATTTTGTTCTACAAAACATTGAAAGAAGAGAGTTCCATTCCATTACCTTGACAAAAAAGAGGCCATGGTAATGGAAGTGTAATCAAATTTGGTGTCTTTTTGTAATAACAAGTTTGATGATTTGTAAATTTTCAGATTGTGAACCCCAACAACAAAAACATCAGGGATATTCCTGGATTGGCACCTCCAGCTCCTGCAAGGAGGCTTTTGTATCTGAGGACACCTGAACATTTCAAGTAAATTTCTCGTGTTTAGGAAGGTGTAGGTCTTCGTGGTTATCTATTTCAAGTACATTCTTGCTTAAAGAAGGCATCGAGACACGACATTGTGAGAATTCGTCTGCTTTGTTTTGCTTTACTTTACTTTGTATGCAATTCAATCTATTCTTGGCTGAGATGTGCATATAGTTTGGTTGTGATTTTGGTTTTTTATATTTCAAGAGAGACTACAGTGTGATCCTGTGTAAATGCTTTACTTTGAGGCGATTCATGTCTTGCGGAATTTACCCACTTAACATTGTTCTGTACACTTAGACAATGTATCAATTCCATTCCCACTGCTGACTTGCTTG

mRNA sequence

ACCAAATTAATTCATTTAATCAATTTTCCCCCATTCCCATTGCCAGCCCATCCTATCTCACGCTTTCTCTCTCTTCCTTTCCCTACATCTTCATCTTTTCTCTTCCTATCTCCATTTTCGTCAATCCCAGTTCTTCATTTTTCTTTTCAATTTCCTTCTGCGTGTTCTTCGATTCTCTAGTTTTCACCATTTCCCCCTTTCATTACATCCACTTTACTCCCACTATCTCTCACTAGGGTTCCTTTGGATTTTCCCCTCTTCCTTCTTCCTTTACTTGGATTAAATGCTATATCTAATTCTATAGATGCAATAAACTGTCCAGATCGTCGCAACTTACGCTTCCGGCGAAATGGCCAGCGGCTTGCAGATGAGTCCTCAGTTAGAGCAGATCCATGGGGAAATTCGTGACAATTTTCGGGCTCTTTCAAATGGGTTCCAAAGACTGGATAAGATCAAAGATTCCAGTAGACAAAGTAAGCAGTTGGAGGAGCTCACAGGAAAGATGAGGGAATGTAAAAGATTAATAAAAGATTTTGACCGTGAAATCAAGGAGGAAGAGAGTAAAAATCCACCGGAAGTGAATAAGCAGCTCAATGATGAGAAGCAATCAATGATCAAGGAGCTGAATTCATTTGTTGCATTGAGGAAAACGTATATGAATAGTCTTGGTAATAAAAGGGTTGAGCTATTTGATGAGGGAGGTGTAAGTGAACCTACAGCTGATGATAATGTTCGGATGGCCTCATGAATATCTATTTTTCTCATTCTATTGCCATGGCTTTGTGCTGTAGCAATGACAAATCAAGAACTTATAGATGCTGGGAAGAAGACAATGGATGAAACCGATCAGGCTATTGAACGCACGCAAAAGGTGGTTGAACAAACTATTGAAGTGGGAACTCAAACTGCTGTTACATTAAAAGGCCAAGTTGCTACAGATAAATGCATCATGCTGTTTCTGTTCCTAATTGTCTGTGGAGTAATAGCCATTATTGTAGTTAAGATTGTGAACCCCAACAACAAAAACATCAGGGATATTCCTGGATTGGCACCTCCAGCTCCTGCAAGGAGGCTTTTGTATCTGAGGACACCTGAACATTTCAAGTAAATTTCTCGTGTTTAGGAAGGTGTAGGTCTTCGTGGTTATCTATTTCAAGTACATTCTTGCTTAAAGAAGGCATCGAGACACGACATTGTGAGAATTCGTCTGCTTTGTTTTGCTTTACTTTACTTTGTATGCAATTCAATCTATTCTTGGCTGAGATGTGCATATAGTTTGGTTGTGATTTTGGTTTTTTATATTTCAAGAGAGACTACAGTGTGATCCTGTGTAAATGCTTTACTTTGAGGCGATTCATGTCTTGCGGAATTTACCCACTTAACATTGTTCTGTACACTTAGACAATGTATCAATTCCATTCCCACTGCTGACTTGCTTG

Coding sequence (CDS)

ATGGCCAGCGGCTTGCAGATGAGTCCTCAGTTAGAGCAGATCCATGGGGAAATTCGTGACAATTTTCGGGCTCTTTCAAATGGGTTCCAAAGACTGGATAAGATCAAAGATTCCAGTAGACAAAGTAAGCAGTTGGAGGAGCTCACAGGAAAGATGAGGGAATGTAAAAGATTAATAAAAGATTTTGACCGTGAAATCAAGGAGGAAGAGAGTAAAAATCCACCGGAAGTGAATAAGCAGCTCAATGATGAGAAGCAATCAATGATCAAGGAGCTGAATTCATTTGTTGCATTGAGGAAAACGTATATGAATAGTCTTGGTAATAAAAGGGTTGAGCTATTTGATGAGGGAGGTGTAAGTGAACCTACAGCTGATGATAATGTTCGGATGGCCTCATGA

Protein sequence

MASGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIKDFDREIKEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVSEPTADDNVRMAS
Homology
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BLAST of ClCG06G004220 vs. Swiss-Prot
Match: NPS13_ARATH (Novel plant SNARE 13 OS=Arabidopsis thaliana GN=NPSN13 PE=1 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.0e-55
Identity = 110/134 (82.09%), Postives = 125/134 (93.28%), Query Frame = 1 

Query: 1   MASGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK 60
           MAS L MSPQLEQIHGEIRD+FRAL+NGFQRLDKIKDS+RQSKQLEELT KMRECKRL+K
Sbjct: 1   MASNLPMSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVK 60

Query: 61  DFDREIKEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEG-GV 120
           +FDRE+K+EE++N PEVNKQLNDEKQSMIKELNS+VALRKTYM++LGNK+VELFD G GV
Sbjct: 61  EFDRELKDEEARNSPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKVELFDMGAGV 120

Query: 121 S-EPTADDNVRMAS 133
           S EPTA++NV++AS
Sbjct: 121 SGEPTAEENVQVAS 134

[Close]
BLAST of ClCG06G004220 vs. Swiss-Prot
Match: NPS12_ARATH (Novel plant SNARE 12 OS=Arabidopsis thaliana GN=NPSN12 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.5e-54
Identity = 107/134 (79.85%), Postives = 122/134 (91.04%), Query Frame = 1 

Query: 1   MASGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK 60
           MAS L MSP LEQIHGEIRD+FRAL+NGFQRLDKIKDSSRQSKQLEEL  KMR+CKRL+K
Sbjct: 1   MASELPMSPHLEQIHGEIRDHFRALANGFQRLDKIKDSSRQSKQLEELAEKMRDCKRLVK 60

Query: 61  DFDREIKEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEG-GV 120
           +FDRE+K+ E++N P+VNKQLNDEKQSMIKELNS+VALRKTY+N+LGNK+VELFD G GV
Sbjct: 61  EFDRELKDGEARNSPQVNKQLNDEKQSMIKELNSYVALRKTYLNTLGNKKVELFDTGAGV 120

Query: 121 S-EPTADDNVRMAS 133
           S EPTA++NV+MAS
Sbjct: 121 SGEPTAEENVQMAS 134

[Close]
BLAST of ClCG06G004220 vs. Swiss-Prot
Match: NPS11_ARATH (Novel plant SNARE 11 OS=Arabidopsis thaliana GN=NPSN11 PE=1 SV=2)

HSP 1 Score: 149.4 bits (376), Expect = 2.7e-35
Identity = 78/128 (60.94%), Postives = 97/128 (75.78%), Query Frame = 1 

Query: 7   MSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIKDFDREI 66
           +S +L +I G+I D FRALSNGFQ+L+KIKD++RQS+QLEELT KMR+CK LIKDFDREI
Sbjct: 7   VSEELAEIEGQINDIFRALSNGFQKLEKIKDANRQSRQLEELTDKMRDCKSLIKDFDREI 66

Query: 67  KEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSL--GNKRVELFDEGGVSEPTA 126
           K  ES N    N+ LND +QSM+KELNS+VAL+K Y ++L   NKRV+LFD  G  E   
Sbjct: 67  KSLESGNDASTNRMLNDRRQSMVKELNSYVALKKKYSSNLASNNKRVDLFD--GPGEEHM 126

Query: 127 DDNVRMAS 133
           ++NV +AS
Sbjct: 127 EENVLLAS 132

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BLAST of ClCG06G004220 vs. TrEMBL
Match: A0A0A0K9V5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G000720 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 3.0e-65
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 1 

Query: 1   MASGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK 60
           MAS LQM+PQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK
Sbjct: 1   MASALQMTPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK 60

Query: 61  DFDREIKEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120
           DFDREIK+EESKNPP+VNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS
Sbjct: 61  DFDREIKDEESKNPPDVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120

Query: 121 EPTADDNVRMAS 133
           EPTADDNVRMAS
Sbjct: 121 EPTADDNVRMAS 132

[Close]
BLAST of ClCG06G004220 vs. TrEMBL
Match: A0A067JYW5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19083 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 9.2e-59
Identity = 118/133 (88.72%), Postives = 129/133 (96.99%), Query Frame = 1 

Query: 1   MASGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK 60
           MA+ LQMSPQLEQIHGEI+DNFRALSNGFQRLDKIKDS+RQSKQLE+LTGKMRECKRLIK
Sbjct: 1   MATQLQMSPQLEQIHGEIKDNFRALSNGFQRLDKIKDSNRQSKQLEDLTGKMRECKRLIK 60

Query: 61  DFDREIKEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEG-GV 120
           +FDREIK+EESKNPPEVNKQLNDEKQSMIKELNS+VALRKTYMN+LGNKRVELFD G G 
Sbjct: 61  EFDREIKDEESKNPPEVNKQLNDEKQSMIKELNSYVALRKTYMNTLGNKRVELFDMGAGG 120

Query: 121 SEPTADDNVRMAS 133
           SEPTA++NV+MAS
Sbjct: 121 SEPTAEENVQMAS 133

[Close]
BLAST of ClCG06G004220 vs. TrEMBL
Match: M5XY74_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010000mg PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.1e-58
Identity = 117/133 (87.97%), Postives = 127/133 (95.49%), Query Frame = 1 

Query: 1   MASGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK 60
           MAS L MSPQLEQIHGEI DNFRAL+NGFQ+LDKIKDS+RQSKQLEELTGKMRECKRLIK
Sbjct: 1   MASNLPMSPQLEQIHGEIHDNFRALANGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60

Query: 61  DFDREIKEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEG-GV 120
           +FDREIK+EES+NPP+VNKQLNDEKQSMIKELNS+V LRKT+MNSLGNKRVELFD G GV
Sbjct: 61  EFDREIKDEESRNPPDVNKQLNDEKQSMIKELNSYVQLRKTFMNSLGNKRVELFDMGAGV 120

Query: 121 SEPTADDNVRMAS 133
           SEPTADDNV+MAS
Sbjct: 121 SEPTADDNVQMAS 133

[Close]
BLAST of ClCG06G004220 vs. TrEMBL
Match: A0A067G9P0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022587mg PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 6.0e-58
Identity = 115/133 (86.47%), Postives = 129/133 (96.99%), Query Frame = 1 

Query: 1   MASGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK 60
           MA+ LQMSPQLEQIHGEIRDNFRALSNGFQ+LDKIKDS+RQ+KQLEELTG+MRECKRLIK
Sbjct: 1   MATDLQMSPQLEQIHGEIRDNFRALSNGFQKLDKIKDSNRQTKQLEELTGRMRECKRLIK 60

Query: 61  DFDREIKEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEG-GV 120
           + DREIK+EE++NPPEVNKQLNDEKQSMIKELNS+VALRKTYMNSLGNK+VELFD G GV
Sbjct: 61  EMDREIKDEEARNPPEVNKQLNDEKQSMIKELNSYVALRKTYMNSLGNKKVELFDMGAGV 120

Query: 121 SEPTADDNVRMAS 133
           SEPTAD+NV++AS
Sbjct: 121 SEPTADENVQVAS 133

[Close]
BLAST of ClCG06G004220 vs. TrEMBL
Match: A0A067GA13_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022587mg PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 6.0e-58
Identity = 115/133 (86.47%), Postives = 129/133 (96.99%), Query Frame = 1 

Query: 1   MASGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK 60
           MA+ LQMSPQLEQIHGEIRDNFRALSNGFQ+LDKIKDS+RQ+KQLEELTG+MRECKRLIK
Sbjct: 1   MATDLQMSPQLEQIHGEIRDNFRALSNGFQKLDKIKDSNRQTKQLEELTGRMRECKRLIK 60

Query: 61  DFDREIKEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEG-GV 120
           + DREIK+EE++NPPEVNKQLNDEKQSMIKELNS+VALRKTYMNSLGNK+VELFD G GV
Sbjct: 61  EMDREIKDEEARNPPEVNKQLNDEKQSMIKELNSYVALRKTYMNSLGNKKVELFDMGAGV 120

Query: 121 SEPTADDNVRMAS 133
           SEPTAD+NV++AS
Sbjct: 121 SEPTADENVQVAS 133

[Close]
BLAST of ClCG06G004220 vs. TAIR10
Match: AT3G17440.1 (AT3G17440.1 novel plant snare 13)

HSP 1 Score: 217.2 bits (552), Expect = 5.9e-57
Identity = 110/134 (82.09%), Postives = 125/134 (93.28%), Query Frame = 1 

Query: 1   MASGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK 60
           MAS L MSPQLEQIHGEIRD+FRAL+NGFQRLDKIKDS+RQSKQLEELT KMRECKRL+K
Sbjct: 1   MASNLPMSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVK 60

Query: 61  DFDREIKEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEG-GV 120
           +FDRE+K+EE++N PEVNKQLNDEKQSMIKELNS+VALRKTYM++LGNK+VELFD G GV
Sbjct: 61  EFDRELKDEEARNSPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKVELFDMGAGV 120

Query: 121 S-EPTADDNVRMAS 133
           S EPTA++NV++AS
Sbjct: 121 SGEPTAEENVQVAS 134

[Close]
BLAST of ClCG06G004220 vs. TAIR10
Match: AT1G48240.1 (AT1G48240.1 novel plant snare 12)

HSP 1 Score: 211.1 bits (536), Expect = 4.2e-55
Identity = 107/134 (79.85%), Postives = 122/134 (91.04%), Query Frame = 1 

Query: 1   MASGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK 60
           MAS L MSP LEQIHGEIRD+FRAL+NGFQRLDKIKDSSRQSKQLEEL  KMR+CKRL+K
Sbjct: 1   MASELPMSPHLEQIHGEIRDHFRALANGFQRLDKIKDSSRQSKQLEELAEKMRDCKRLVK 60

Query: 61  DFDREIKEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEG-GV 120
           +FDRE+K+ E++N P+VNKQLNDEKQSMIKELNS+VALRKTY+N+LGNK+VELFD G GV
Sbjct: 61  EFDRELKDGEARNSPQVNKQLNDEKQSMIKELNSYVALRKTYLNTLGNKKVELFDTGAGV 120

Query: 121 S-EPTADDNVRMAS 133
           S EPTA++NV+MAS
Sbjct: 121 SGEPTAEENVQMAS 134

[Close]
BLAST of ClCG06G004220 vs. TAIR10
Match: AT2G35190.1 (AT2G35190.1 novel plant snare 11)

HSP 1 Score: 149.4 bits (376), Expect = 1.5e-36
Identity = 78/128 (60.94%), Postives = 97/128 (75.78%), Query Frame = 1 

Query: 7   MSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIKDFDREI 66
           +S +L +I G+I D FRALSNGFQ+L+KIKD++RQS+QLEELT KMR+CK LIKDFDREI
Sbjct: 7   VSEELAEIEGQINDIFRALSNGFQKLEKIKDANRQSRQLEELTDKMRDCKSLIKDFDREI 66

Query: 67  KEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSL--GNKRVELFDEGGVSEPTA 126
           K  ES N    N+ LND +QSM+KELNS+VAL+K Y ++L   NKRV+LFD  G  E   
Sbjct: 67  KSLESGNDASTNRMLNDRRQSMVKELNSYVALKKKYSSNLASNNKRVDLFD--GPGEEHM 126

Query: 127 DDNVRMAS 133
           ++NV +AS
Sbjct: 127 EENVLLAS 132

[Close]
BLAST of ClCG06G004220 vs. NCBI nr
Match: gi|449441500|ref|XP_004138520.1| (PREDICTED: novel plant SNARE 13 isoform X1 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 4.2e-65
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 1 

Query: 1   MASGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK 60
           MAS LQM+PQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK
Sbjct: 1   MASALQMTPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK 60

Query: 61  DFDREIKEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120
           DFDREIK+EESKNPP+VNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS
Sbjct: 61  DFDREIKDEESKNPPDVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120

Query: 121 EPTADDNVRMAS 133
           EPTADDNVRMAS
Sbjct: 121 EPTADDNVRMAS 132

[Close]
BLAST of ClCG06G004220 vs. NCBI nr
Match: gi|778708995|ref|XP_011656327.1| (PREDICTED: novel plant SNARE 13 isoform X2 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 4.2e-65
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 1 

Query: 1   MASGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK 60
           MAS LQM+PQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK
Sbjct: 1   MASALQMTPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK 60

Query: 61  DFDREIKEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120
           DFDREIK+EESKNPP+VNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS
Sbjct: 61  DFDREIKDEESKNPPDVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120

Query: 121 EPTADDNVRMAS 133
           EPTADDNVRMAS
Sbjct: 121 EPTADDNVRMAS 132

[Close]
BLAST of ClCG06G004220 vs. NCBI nr
Match: gi|659116844|ref|XP_008458287.1| (PREDICTED: novel plant SNARE 13 isoform X1 [Cucumis melo])

HSP 1 Score: 255.8 bits (652), Expect = 4.2e-65
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 1 

Query: 1   MASGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK 60
           MAS LQM+PQLEQIHGEIRDNFRALSNGFQRLDKIKDS+RQSKQLEELTGKMRECKRLIK
Sbjct: 1   MASALQMTPQLEQIHGEIRDNFRALSNGFQRLDKIKDSNRQSKQLEELTGKMRECKRLIK 60

Query: 61  DFDREIKEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120
           DFDREIK+EESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS
Sbjct: 61  DFDREIKDEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120

Query: 121 EPTADDNVRMAS 133
           EPTADDNVRMAS
Sbjct: 121 EPTADDNVRMAS 132

[Close]
BLAST of ClCG06G004220 vs. NCBI nr
Match: gi|659116846|ref|XP_008458288.1| (PREDICTED: novel plant SNARE 13 isoform X2 [Cucumis melo])

HSP 1 Score: 255.8 bits (652), Expect = 4.2e-65
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 1 

Query: 1   MASGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK 60
           MAS LQM+PQLEQIHGEIRDNFRALSNGFQRLDKIKDS+RQSKQLEELTGKMRECKRLIK
Sbjct: 1   MASALQMTPQLEQIHGEIRDNFRALSNGFQRLDKIKDSNRQSKQLEELTGKMRECKRLIK 60

Query: 61  DFDREIKEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120
           DFDREIK+EESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS
Sbjct: 61  DFDREIKDEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120

Query: 121 EPTADDNVRMAS 133
           EPTADDNVRMAS
Sbjct: 121 EPTADDNVRMAS 132

[Close]
BLAST of ClCG06G004220 vs. NCBI nr
Match: gi|802706796|ref|XP_012084194.1| (PREDICTED: novel plant SNARE 13 [Jatropha curcas])

HSP 1 Score: 234.2 bits (596), Expect = 1.3e-58
Identity = 118/133 (88.72%), Postives = 129/133 (96.99%), Query Frame = 1 

Query: 1   MASGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIK 60
           MA+ LQMSPQLEQIHGEI+DNFRALSNGFQRLDKIKDS+RQSKQLE+LTGKMRECKRLIK
Sbjct: 1   MATQLQMSPQLEQIHGEIKDNFRALSNGFQRLDKIKDSNRQSKQLEDLTGKMRECKRLIK 60

Query: 61  DFDREIKEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEG-GV 120
           +FDREIK+EESKNPPEVNKQLNDEKQSMIKELNS+VALRKTYMN+LGNKRVELFD G G 
Sbjct: 61  EFDREIKDEESKNPPEVNKQLNDEKQSMIKELNSYVALRKTYMNTLGNKRVELFDMGAGG 120

Query: 121 SEPTADDNVRMAS 133
           SEPTA++NV+MAS
Sbjct: 121 SEPTAEENVQMAS 133

The following BLAST results are available for this feature:
BLAST of ClCG06G004220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NPS13_ARATH1.0e-5582.09Novel plant SNARE 13 OS=Arabidopsis thaliana GN=NPSN13 PE=1 SV=1[more]
NPS12_ARATH7.5e-5479.85Novel plant SNARE 12 OS=Arabidopsis thaliana GN=NPSN12 PE=2 SV=1[more]
NPS11_ARATH2.7e-3560.94Novel plant SNARE 11 OS=Arabidopsis thaliana GN=NPSN11 PE=1 SV=2[more]
BLAST of ClCG06G004220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9V5_CUCSA3.0e-6596.97Uncharacterized protein OS=Cucumis sativus GN=Csa_6G000720 PE=4 SV=1[more]
A0A067JYW5_JATCU9.2e-5988.72Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19083 PE=4 SV=1[more]
M5XY74_PRUPE2.1e-5887.97Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010000mg PE=4 SV=1[more]
A0A067G9P0_CITSI6.0e-5886.47Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022587mg PE=4 SV=1[more]
A0A067GA13_CITSI6.0e-5886.47Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022587mg PE=4 SV=1[more]
BLAST of ClCG06G004220 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G17440.15.9e-5782.09 novel plant snare 13[more]
AT1G48240.14.2e-5579.85 novel plant snare 12[more]
AT2G35190.11.5e-3660.94 novel plant snare 11[more]
BLAST of ClCG06G004220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449441500|ref|XP_004138520.1|4.2e-6596.97PREDICTED: novel plant SNARE 13 isoform X1 [Cucumis sativus][more]
gi|778708995|ref|XP_011656327.1|4.2e-6596.97PREDICTED: novel plant SNARE 13 isoform X2 [Cucumis sativus][more]
gi|659116844|ref|XP_008458287.1|4.2e-6596.97PREDICTED: novel plant SNARE 13 isoform X1 [Cucumis melo][more]
gi|659116846|ref|XP_008458288.1|4.2e-6596.97PREDICTED: novel plant SNARE 13 isoform X2 [Cucumis melo][more]
gi|802706796|ref|XP_012084194.1|1.3e-5888.72PREDICTED: novel plant SNARE 13 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG06G004220.1ClCG06G004220.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 45..72
scor
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 7..132
score: 9.5
NoneNo IPR availablePANTHERPTHR21230:SF35SUBFAMILY NOT NAMEDcoord: 7..132
score: 9.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG06G004220Cla97C06G113650Watermelon (97103) v2wcgwmbB273
ClCG06G004220CmoCh17G003880Cucurbita moschata (Rifu)cmowcgB325
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG06G004220Watermelon (97103) v2wcgwmbB269
ClCG06G004220Wax gourdwcgwgoB501
ClCG06G004220Watermelon (Charleston Gray)wcgwcgB160
ClCG06G004220Cucumber (Gy14) v1cgywcgB228
ClCG06G004220Cucumber (Gy14) v1cgywcgB453
ClCG06G004220Cucurbita maxima (Rimu)cmawcgB328
ClCG06G004220Cucurbita maxima (Rimu)cmawcgB745
ClCG06G004220Cucurbita maxima (Rimu)cmawcgB804
ClCG06G004220Cucurbita moschata (Rifu)cmowcgB747
ClCG06G004220Wild cucumber (PI 183967)cpiwcgB507
ClCG06G004220Cucumber (Chinese Long) v2cuwcgB480
ClCG06G004220Melon (DHL92) v3.5.1mewcgB124
ClCG06G004220Melon (DHL92) v3.5.1mewcgB442
ClCG06G004220Watermelon (97103) v1wcgwmB332
ClCG06G004220Watermelon (97103) v1wcgwmB344
ClCG06G004220Cucurbita pepo (Zucchini)cpewcgB144
ClCG06G004220Cucurbita pepo (Zucchini)cpewcgB297
ClCG06G004220Cucurbita pepo (Zucchini)cpewcgB788
ClCG06G004220Bottle gourd (USVL1VR-Ls)lsiwcgB029
ClCG06G004220Cucumber (Gy14) v2cgybwcgB230
ClCG06G004220Cucumber (Gy14) v2cgybwcgB443
ClCG06G004220Melon (DHL92) v3.6.1medwcgB119
ClCG06G004220Melon (DHL92) v3.6.1medwcgB437
ClCG06G004220Silver-seed gourdcarwcgB0073
ClCG06G004220Cucumber (Chinese Long) v3cucwcgB254
ClCG06G004220Cucumber (Chinese Long) v3cucwcgB502