ClCG06G002140 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCATTTTCTTCCGGCCTGGAATGGATAAAAGGTGATCTTTCCTCCTATAGGAGAAGTCTTCTAAATCCATAGGGTGATTAGAACAAAATGGTGTCGTGTTCATGTCAATGTAATATGGCTTTTGTACAACACGTGCTACATAATTTGGAGTTCAAACTCTCAGCTTTAAACTACTTAAAATTATCATTTTATCCTTCCAAATGCTTTAGTGAAAATAGTTACGTCCATTTACTTTCTCAGCACTTACTCTGTTATGCTCTTTCATGATTGTGATGCAGCTTATTGAATATTATTATGCGCTACCAACGCCACCTTCAAGGGAGAAGTGAAAGTCCAATTGAAAATGACCTTCAAGAGAGAAGTGAAAGTCCAATTGACAATGACCTTCAAGAGAGAAGTGGAAATCTAATTGATAATGGTAGTGGTACAAAGGTAAGTGAGGACTTACAATCTCTAGTTAAGGTAACAAAAATATGTTTAACATGTCTACTAAAATATTTATAGATTACTAAAAGTAATTTTCATAAACATACAAAAAAAAGTAAATACATAAAATAAAAAAATAAATCAAATGACGTCCCATTCCAATTTTAAAGAGACTAGTTTTTATCAAATTGAAAGCGCTTTTAAAAATGGTAGTAGTTATAGTATTGTTCTTTAGTAAGTGTTTCATTTCAAAACACAAGCATACCAGAGAAATAATAAGAAGGCTGGTTAGAAGTGCTTGAGCAGTTCACTATTCGATCCTTTTTTTCCTGGGTGGGGAATAATGTGACTATCATTACCAAGGGGGGGAAATCTTGCATCTCCTTTTTCTTTGAAATATAATCTTCCATCTTTCTGCTGATTTTCTGCAGAACCAGGAATCTGATGAGACAATATTGGTTTCACTTGGAAAGCTCCTACAAACTATTCAAAGGCAATTTTCCGTATTTTTACTACAGCCATTTTTATGTATTAGAATTGCTCAAATCTCAACTAGGGTGTCCTCATTTCCAGTCAGGTTGAAGAACCAAATTTCAAGAAGCTCGATGTAACTCAGATGATGCAGTTGGAGAATCAACTGGAAGGCACACTTGACAAAATCAAATCTCAAAGAGTGAGTTTATTTATTTGTACCGCATATTCATCTAAGAGGTTTCAACTTGTTAACCCTTCTGAGACCCTCACTGCAAAAGTTATATGGTGGTCCCCTTGGAAGCTTATGCAATGTTGCATAGGATCATTTTAGGAAAATATAGCCCTTTCCTTAACTAATCTAACTAAAGCGTTGAAGGCACTTTTAGGGCATGTGAAAGCCTATTTTGGTATATATGAAATTTTCTAGAATCGTTAGGCTCTTTGTGCTCATTGGTTTCAACTAGAACTAGCTCAGTTGTTGTCTTACATGTCTTTATCAATTATCCTGTTTTCAAGTTTCTTCCAATGACATCTATTCTCTAGACTAACTGAAGGATTGAAGGCACTTTTAGGGACTGTGAAAGCCTATTTTGGGGTATTTGAAATTTTCTAGGTCCATTAGGTTATTCACGCTGATTGATTTCGGCTTAGGAATAACCCTAGTTGTTGTCTTCCCTGTCTTTATCAATTATCCTCTTTTCAAGTTTATTCCCATTACATCTGTCCGTATTTTGAGGATGCTATATGATTCAGTCATTTTTGTCTCATTTACAAGTATTTAGATGTTACTTTGCTACATACTGTGCTAATCGACTTTTGTCTTCTTGTATGTGGGTCCAACCCCTCACTTCCTCTTTATTTTGCGTACAGTACTTTTGTGTTTACAAGCCAAAGTTTTAACACAAGAAAGGCGAAGTATATATTGGATTCGATACAAATTGCTGGTCATATGGATAGAACTAACTTCGGGATTGGACACAGTATAAAATATCTTTTAGAAGCACATATTCTGCCAGGGGGACGATTGGGGCGTGGACATAAAGGTCTTTATGACACAATCAATAATTCGCTATTACACCTTAATCATCTTCTGTCATGTTGGGCCTACATAATGTAAGGAGGCGTCGATGAATCTGGAGCATGTTTTGTGGGAATAGGTCTAATTCCCCACTTCATGACTGAGGGGTGATTATTTGGCACACAGCTTTATTTAGGTTTTGTAGAACGTTGGCTTAAGCAAAAGAGGATCTTTACAAGTGAGGAAAGTTCTTGAGAAGAGATTAAGCAAAAGAGGATCTTTACAAGTGAGGAAAGTTCTTGAGAAGAGATTAGAACCTAGGCTAGGCTCATTACCTCCTCATGGTGATGTAGGAAGAATGGGTTAATTGGATAATATTCTAGGTTAATTTCCTTTTTACCCACATTGTAATAAAACTCTATAACTAAGAGTATTCCCCTCTTGTATTAGGCACATTATCATCTAAATAAAAGATTCACAAGTTCGGTTCTTGGAGGATTACTCCTTGAGGCTACTCAGGCTATATTACATTGGGTCTCAATTACGGAAAATTTTTGTTTCCCCCGTGGAACATCTGACATGGGCAGAAAAGGAAAATCTTTAAGCATGAAGAAAGTTCTTGGAAGTTGGAAGGAGGTTGGGACCTAAGCTGGCTTCATTACCTTCAAGGGTCCAAGTTGCTAACAATTTTAGCGATTATGTTTTTATAACTATATGTTGTTTAACAGTTTCTTGTTTTTGCTCCTTGTGACATGTACTTTCCCTTTGTTACCCTTTTTGTATTTATCCTGTGCTTTTTCCCCTCAATGGAAGTTGATTGCTTAATGGAAAACTATTTTTCAATGTTTTCCATGAGTCATCCCACACATAAATAGTAAATGCATGGTGTGGAGACTGATTTGTGTAGATTTCATTATTCCTTTTTGGTGTTGTCCTACTCTGCGGTCCTCCAAAAGTTTTTTTTGGTATATTCCAAAACATTATGGCCCAACATTTTCTTCAACGAACAGATATGTAGGTGAGTTTTATATGAAGATGAGTTTTTCAACGTGACATTTAGGCTAAATTGAAAATGACTTGAAAAGAACTTTGTATTTTGTTTTGATAACCCTGAACTTTCATAGCTAGCAATAATACCCTTAAACTTTTAAAAGGAGTTAAACAAACATCCTTATCATTAGCATATGAACAGAAACCATTATCTATACCCTTGAACAATGAATCCCCAAATATAGAAAAGACCAACAAAGGAATATCATCTTCAATGATTGGAGAACCTTCTTAATGACCACATCAAATCGACCAACTGGAATTACACAAACCATCAACAGATTCTCCTCTATCCTTCCCACTGAAAAAGATGCCTCAAAGCATATGGCCATGTCATTTTGAAGAATAAAGAGCAGTTCTTTAAATTCACTAAGTTTGTTGTGGGTGATGGGAAAGCGGTCAGATTCTGGGTGGATAGTTGGTGTGATCCTTAGCCCCTGCACAGAAATTTCTCGATATCTTTGCCATCTCTATCAAAAAAGGATGTTGTGATTGCGGGTTGTTGGTGTGGCTCCAATCAAACCTGGGATTTGGGTTTTAGAAGATGTATTTGTGATATAGAGATGGGTAATGTGGTTCCGATCTGGTAAATCCTAAATTCTTGGTGGTCCAGGGCAGTCACGACTGCCTTAAGTGGAAGATAGATGCCTTTGGGAAGTTTACAACCAAAGCTACCTTCTTAAACATTGCTAAGAGGACTCCTACTTTCACCTTTCCTTTGGTGAATCTTGTCTAGAAGCTAAAAGTTTCCAGAAAAGTTAAATTCTTCCTCTGGTCCCTTGCTTATAGAAGCTTAAATACTCGTGATAAGCTTCAAGGAAACTTAAAAACAGTTCACTGTCTCCTTCAATATGTTGCCCTTGCTTGAAAGATGAGGAGTCTCTAGACCACTTATTTCTGCATCGTGAATTTGCCACTAAGGGGTGGACCCTTCTGTTTAGTATTTTTTGTATGGAGAGTTGTCTCCCAAACAAAGTAGATGATTGGATGCATGATGGGCTTGATAGTTTTGCCTTCGGTGGTAAAGGGAAAGTTCTTTCGGAGTTGTTTTGCGGTCCCTCTTGTGGTGCCTTTGGAAAGAAATGAATAGTAAAATTTTTGAAGATAAGTATGTTTCTTTTGATTCTTTTTGGACTTTTGTTCAACATACAGCCTCTTGGTGGTGCACAAATGACACCAAACACTTTTGTAATTATAGTCTTTTGAAAATCTTTAACAATTGGAAGGCTCTTCTTCATTATTGCTTTGGGGAGGGGTCTTCTCAACCCCTTGCTCTTAGGCTGTTTTTTGGTTTCTAATGGAGTTCACATTGCTGTGTTCTTATTTTTTTTTTTAAAAAAAAAGGAAAATAGAAGCATATGGCCATGTAAAGACGAGGGCAGGGCAAGAAAAATATACACAAGGAGGGGGAACTATGTGTGCCTATCTTTTGAGAAAAGGAGAACCTGCACAGGGAGGCAACAACAGATATAGATTAATTTAAGGAAACTGTTCATGTTAAAAAGTAAGGTTGAAGATTAACACTGCTGAAACTGGAAGATACTGCCAGCTATGGTAACAAGACAAGAAATTAACTGATAAGTGGTTTGGTGTTTCAGAAAATATGAAGGCCAAGCAAGATAAGCAGAGGCGAGATAACAGTTTTATTGGGTGATTAGGTATTTCCAAAACTTCAGCCTAATGGCGGCTATTAGTCCTAGGTAACCTATCTCCCTGTTTTAATGGACTTTATCTCATAATTAAAAGAGTTGCTGCTCACAAGCACCATCCATTCAGTATTCCATTTTCCTCAGTTGAGGCTGGCTAAGGGATCTAATTTTAAGCCCATCATGTAACTAGGTCATTTACGTTTGTGCAGAGATGTGCATCTACTTATATTTTTATGCTGCCCTGGAATGAACACCAGCATTTAATACTACTCCCAAGGAGCTGTTTGACTCGATTACGTTTCACCTTTAAGACAATGTGAAAATTTTGGAAGGGATATCAGGGGGTCCAATAGTCCTAAAATTAAGAAACAATAAAGCAATGTGAAGTTCTGGGAGATGTGAGCAAGGAAGTTGAAGAAAATAGGCTTTATGAAGGGAGAGAGTCAAAACCGTTGTACTTTCCCCTACTCCACTATCTGTGTGTTTAAGCCATTCACAGTTTCATTCCTGCTTTAAGATAGGTAAGTTTGACAATGGTTCACTTGTTGATGAATTCAAAACACTACCTCAAACTGCCAAATCTTGCACACTCCCTTCTTGTCAAAGTGCTGTTCTTGTGTAGACCAAAACCTCATAATTAAGGCAAGCCAGAATTCTTCCCAAGTTTGGAAAAGTTCTCTTCTCTTCCCTACAGAAGCATGCTCATGGTTTCCTCCTCTTCATATAGGATATCAAAAGGGCAAAACTATTTAACTTGGTATATACATTAGCCATTCTATAATTAACTCTTCCTTAGAACTTAAGGACATAGTTGTACAATCTATAGAACAGATCATGTTCAAGTAAAGGTCGTATTCTATAATTAACTCTTCCACAAATTAGTGTGCAGAAAAGAAAAAGAAAAAAAAAGGATAGAACTCAAGCACAAATTAAAGAAAATAGTTTTCTTTTCTCCATCTCTATTAGAACCTTTGCAAAATCACACGACGACTTCCTCAAATATATGCAAACAGCCTGTCAACTTGAAGAGGAGAACTAACTGTATGATTCTCAAGTTTTAAATTGACTCCAGGCTGTAACTTTCTGGAATGTGTGGACTCAAAAGGGAATTCCAGCCAGAGGCTCAAATTACAAACATTCTACAACTAACTGCTCAATCCTCAAGTGTGATTGAATCAACATATAATGACATACAATTCAATAGTAATAAAAGACTTCTCCATATTAATCACAATTGCTATAAGAAATTGGAATTAGTTGGGCATGCGGTGGTGTCTGATTGCTTAGAACTTTTTTAACATCTAAATTTCCAGAAGTATATCTAAGTATAGATAGAAACCTCACCTGAATTCCAAATATGTGGGGAGCGATTCCAACGAACTGCTTAGTCGGACGGTAACAAGACTTGTATGAGAATATGCTTCTGCTTTTGCACATTGGTCTGATTTTAGATGAACTGGAAACAAAATCTTGAAAGTAGATACCAGTGAGGAATTCAAAAGTGTTACAATGACTATTCTTTTTACTTGCAGATTGAGGCAATGATAGAAAACGACTGTTGGACATACAGCATGGATATGGCTATGGACATGTTCAACAGCCCGTCATTTAATTAG ATGAGCATTTTCTTCCGGCCTGGAATGGATAAAAGCTTATTGAATATTATTATGCGCTACCAACGCCACCTTCAAGGGAGAAGTGAAAGTCCAATTGAAAATGACCTTCAAGAGAGAAGTGAAAGTCCAATTGACAATGACCTTCAAGAGAGAAGTGGAAATCTAATTGATAATGGTAGTGGTACAAAGGTAAGTGAGGACTTACAATCTCTAGTTAAGAACCAGGAATCTGATGAGACAATATTGGTTGAAGAACCAAATTTCAAGAAGCTCGATGTAACTCAGATGATGCAGTTGGAGAATCAACTGGAAGGCACACTTGACAAAATCAAATCTCAAAGAATTGAGGCAATGATAGAAAACGACTGTTGGACATACAGCATGGATATGGCTATGGACATGTTCAACAGCCCGTCATTTAATTAG ATGAGCATTTTCTTCCGGCCTGGAATGGATAAAAGCTTATTGAATATTATTATGCGCTACCAACGCCACCTTCAAGGGAGAAGTGAAAGTCCAATTGAAAATGACCTTCAAGAGAGAAGTGAAAGTCCAATTGACAATGACCTTCAAGAGAGAAGTGGAAATCTAATTGATAATGGTAGTGGTACAAAGGTAAGTGAGGACTTACAATCTCTAGTTAAGAACCAGGAATCTGATGAGACAATATTGGTTGAAGAACCAAATTTCAAGAAGCTCGATGTAACTCAGATGATGCAGTTGGAGAATCAACTGGAAGGCACACTTGACAAAATCAAATCTCAAAGAATTGAGGCAATGATAGAAAACGACTGTTGGACATACAGCATGGATATGGCTATGGACATGTTCAACAGCCCGTCATTTAATTAG MSIFFRPGMDKSLLNIIMRYQRHLQGRSESPIENDLQERSESPIDNDLQERSGNLIDNGSGTKVSEDLQSLVKNQESDETILVEEPNFKKLDVTQMMQLENQLEGTLDKIKSQRIEAMIENDCWTYSMDMAMDMFNSPSFN
BLAST of ClCG06G002140 vs. TrEMBL
Match: A0A0A0KFD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095280 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 9.3e-33 Identity = 81/125 (64.80%), Postives = 92/125 (73.60%), Query Frame = 1
BLAST of ClCG06G002140 vs. NCBI nr
Match: gi|778711881|ref|XP_011656809.1| (PREDICTED: MADS-box transcription factor 8-like [Cucumis sativus]) HSP 1 Score: 157.9 bits (398), Expect = 1.3e-35 Identity = 87/131 (66.41%), Postives = 98/131 (74.81%), Query Frame = 1
BLAST of ClCG06G002140 vs. NCBI nr
Match: gi|659119793|ref|XP_008459847.1| (PREDICTED: MADS-box transcription factor 8-like [Cucumis melo]) HSP 1 Score: 156.8 bits (395), Expect = 2.9e-35 Identity = 86/132 (65.15%), Postives = 101/132 (76.52%), Query Frame = 1
BLAST of ClCG06G002140 vs. NCBI nr
Match: gi|700191257|gb|KGN46461.1| (hypothetical protein Csa_6G095280 [Cucumis sativus]) HSP 1 Score: 147.9 bits (372), Expect = 1.3e-32 Identity = 81/125 (64.80%), Postives = 92/125 (73.60%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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