ClCG06G001960 (gene) Watermelon (Charleston Gray)

Overview
NameClCG06G001960
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionU-box domain-containing protein
LocationCG_Chr06 : 2106383 .. 2109846 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCTAAGAAATCGACCCTCCAAGGTAAACAGAAAACGTAAACAATAGAGAATCAGACATAAAGACTTACGTAGTTCACTAATAATGTACTGGCTACATCCATGGCAGAAAAAGAGAACAGTTTTATTAGTAGAGAGAAAAATGTAAGAGATCAGATTATAGAAGCACCTCTAGAGTTGGAGAGTCTATAAGTGCACTCCTCTTAACCTTAGAGCCAAAATCGTAATAACGTAAGTAACATAATTATGAATACCAGAGACCCGGTTCTTGGTTGTTTGGGTATTAAGACATTCCAACATCAGAATTACGAGGAAAGCACAAACAGATTACAGAAGCCAGGGTGGTTGCCAACAAGCAGAGGCAAGTTGATGATGGGGGCGGTTGGTGTACAATGTAAGGTCAGCAAGCATTAACTATGGACTACATAGAAATTATTCAATTGTCCATTACCAAACATCATGGTCCATGGGAGCATGGTCAAAGCAAGCCACTTTTCACTTTATTTATTTATTTTTATTTCATTGATCAAAGAGATTCAGTCTGTAACATTCACATCTGTTTTTGGATCATAGCCTACTGATTGTTTTCAGATTAATCAGCAGCCTACTGATGTATCTAATCCACACTTTAATCAGAATGATCAACACCTACCAAAGTCATATTTTATGTGTTTTTAGATGAGGCTTATCTTGTTGTTTTGAAGAAAAGTGAAGAGAAGTTGGAAAAGACTTTGCAACTTTTGGAAGAATCTATAGTGGCTGCATGTGCCACCCCTTCATCATATTCTATATTAGTCCCCACGATAAGGATGGAAATGCTAAAGATAAATTGTTTTAGGCTATTTTGACAATGACCCACTTTTAAATTTTGCTCCTTCTCTCTCTCTCTTCTTTGGTATTAGAGACATGAGTGTATTTGTTTAATGTGTTTCATTTTTCTTTTATGTTCGTTACCCTTAAAAGTTGTTTGTAAGTTTAGAAAGTAATAAATAAAAGAGATCAGTAAGTTCTAAAAATTGTCTGTCATTTTTCACATTTATAATGTACAAAGGATGAAAAAAGTATGGGAGAAACAGAATGATCAAACTGATAAGAGTTTGCCAATTGAAATAAGGACCACCTTATGTTCAGATAGTGGTCAAAGTTTTCACTTTGAGAGGAGCAAAATCAAAAGAATTTCTTTGGTTTTTTCACCTCTTTTGTTTGACTTAACCAAAGAGATACAACAAGGGGAAAAAAACAAATGTTGACATAACAATGTGGCTGCAGGCCCATGATACAAGAGAATCTATCCTCTCTTTCTTTCTTTTCCTTTGTGGTTATGAGAGCAAGAATGTCTTTTCCTTTGTATACTTCCAACCCACTACAACACATTCTTGTCATTTTCATTCTCATATCAATTCTCATTGTTATGGAGAGCCAAAGAGAGAGAGAGAGCTAAGAATGGAAGAGGAGTTTCAAGGGAGACCAACAGAGTTTCAACTGCAATGTTGCAGTGCAAGGATCATGTCCCCAGAGATCGTTGAGATTGGAGACGAAAGTAAGACGATTATTAGTAGCAGAGACGGTGGTGCAACCGACGTCTATGTCGCCGTTGGTAAAGATGATATAGATGTACTTAAATGGGCCCTTAATCATGCCATCTCACCTGGTTGTTGTGTCTTTCTTGTCCATGTTTTTCCTCCTCTCACCTACATCCCTACACCAGGTAATCAAGATTTCAACTCTCTCTCTCTCTCTCTCTCTCTTTTCCATCTTTCAGATCATAACCAAAGATTTACAGATCAGTCAACAACTTTTCTAGACTGTTTTTCTTGCATAATCTACCTATAAAGGATGTTTGATGCATATGAGCCATAAGGCAATGTCTATATTTTGTTCCTTGTGTTCCTTCCAAAAGAGTCAAACTCAAGCATAGATTGCAAACATAAATTCTTCTTTAGATGATAGGATAGGAAGAAAACTAACTACAAAACGTGTTGATGGAACAAAATATGTTTTTGTTTATGCAATGGAAATTCTCTTCAAACACACAAGAAAAAGATATGATCAAGAGAACATTATAATATTCATTGGATTGGAATTCATCTATGTTCATGAATTGCTATGAGTTGCAACATTTTTACCTGCAACCCCATATTTGGTTTCAGTTGGAAGATTAGCAAGGAGCCAACTAAGCCAAGAACAATTAAGAGTTTATATCAATGAAGAAAACAACAGAAGGAGAAATCTGTTGCAGAAATACATCCGCTTATGCACTGATGCTAAGGTGTTCCTAAATCACTCTCATCCCCCAATAAATAAATGTCATAAGTACACGTTTAGAAGTGATTTTGAAATAGTTAATATCACTTTTGTCCCGTTTATAATTACACTGAAACATACCCGTATCACTCAAAAATCAATTTAGTGTTTAATTCCCTACACGTTTAAATGCATTTTTCATAGTATTAAAATTGATTTTGAAAATTTGAAGGAATAAAAACACTTTCAAGTAGTTTTGAAAATGAGAAAAGTGATTTTCACTATTTCAGAATCACTCCCGAACACGTCTTAATCCGAAAAAACTAATTTGTTCAGGTGGCAGTGGACACATTGCTTCTAGAGAGCAACACAACAACCAAAGCAATCCTTCAACTAATTCCAGTGCTCAATATCACCAATTTGGTCATAGGGACCAAAAAGCCACTTTCCACCAGGTCTGGAACTTTTCTTTTTTTATTCATTTTGGGATTTTTTTTCCAAAGATTCTTGAAGGTATGACCCACTCCCAGCCGTGTGAATGTTGAATGACCCAATTCTAAAATATCTATGAAACTAACATTCTGTATGAGCATTCGACCACTCATTGTCGGGTTAGAGACGTCTTACCCATCGTGAAATGGTCGGAACCCTAACATACCCCTTTGAGATTGGATTATAATTACAAAAACCTTTCTTTTAATCAAATTTCCATATGATTTGTGCATTTTTTTTTGTTGAGTACAACAATTGTGGAGATAGGAGATCAAACCTTCCACCTCTAGGATGGAAGACCATGCCAATTACCCCTGAACTGACCTTACTTTGAAAATTTGTGCAATTTGTTGATAGGCTATTAGGAAAAAGAATGGCGACAGGAGAGTTTGTGAAAAAGAATGCACCAGAGTTTTGTGAGGTTACCATTGTTTATGAAGGCAAAAAAATGGATGATCAGCGTCAACAAGAAATGGGGTTGTTTTCTTCTTCTCAAGATTCCGATTGCCGGCGGCGGCGCTCCGGGAAGAACTTGTTCGAGTGTGTTTGCTTGTCGAGCAAGTCGGGTTGCGATTGATGGGTTAATGCAATGAACAACAGAAGAAGAAGATGAGGATCACCATTTCTTACTTAACTTTTGGTTTGTTTTAATAAACCGATTGACATTGTGATGAAAGGCTACAGAAGAATCCCATATCAGCTAGCTTGTAATTTAGCGGCAGCAGC

mRNA sequence

ATGGAGCTAAGAAATCGACCCTCCAAGTTCACTAATAATGTACTGGCTACATCCATGGCAGAAAAAGAGAACAGTTTTATTAGTAGAGAGAAAAATGTAAGAGATCAGATTATAGAAGCACCTCTAGAGTTGGAGAACATTCCAACATCAGAATTACGAGGAAAGCACAAACAGATTACAGAAGCCAGGGTGGTTGCCAACAAGCAGAGGCAAGTTGATGATGGGGGCGGTTGGTGTACAATAATGGAAGAGGAGTTTCAAGGGAGACCAACAGAGTTTCAACTGCAATGTTGCAGTGCAAGGATCATGTCCCCAGAGATCGTTGAGATTGGAGACGAAAGTAAGACGATTATTAGTAGCAGAGACGGTGGTGCAACCGACGTCTATGTCGCCGTTGGTAAAGATGATATAGATGTACTTAAATGGGCCCTTAATCATGCCATCTCACCTGGTTGTTGTGTCTTTCTTGTCCATGTTTTTCCTCCTCTCACCTACATCCCTACACCAGTTGGAAGATTAGCAAGGAGCCAACTAAGCCAAGAACAATTAAGAGTTTATATCAATGAAGAAAACAACAGAAGGAGAAATCTGTTGCAGAAATACATCCGCTTATGCACTGATGCTAAGGTGGCAGTGGACACATTGCTTCTAGAGAGCAACACAACAACCAAAGCAATCCTTCAACTAATTCCAGTGCTCAATATCACCAATTTGGTCATAGGGACCAAAAAGCCACTTTCCACCAGGCTATTAGGAAAAAGAATGGCGACAGGAGAGTTTGTGAAAAAGAATGCACCAGAGTTTTGTGAGGTTACCATTGTTTATGAAGGCAAAAAAATGGATGATCAGCGTCAACAAGAAATGGGGTTGTTTTCTTCTTCTCAAGATTCCGATTGCCGGCGGCGGCGCTCCGGGAAGAACTTGTTCGAGTGTGTTTGCTTGTCGAGCAAGTCGGGTTGCGATTGATGGGTTAATGCAATGAACAACAGAAGAAGAAGATGAGGATCACCATTTCTTACTTAACTTTTGGTTTGTTTTAATAAACCGATTGACATTGTGATGAAAGGCTACAGAAGAATCCCATATCAGCTAGCTTGTAATTTAGCGGCAGCAGC

Coding sequence (CDS)

ATGGAGCTAAGAAATCGACCCTCCAAGTTCACTAATAATGTACTGGCTACATCCATGGCAGAAAAAGAGAACAGTTTTATTAGTAGAGAGAAAAATGTAAGAGATCAGATTATAGAAGCACCTCTAGAGTTGGAGAACATTCCAACATCAGAATTACGAGGAAAGCACAAACAGATTACAGAAGCCAGGGTGGTTGCCAACAAGCAGAGGCAAGTTGATGATGGGGGCGGTTGGTGTACAATAATGGAAGAGGAGTTTCAAGGGAGACCAACAGAGTTTCAACTGCAATGTTGCAGTGCAAGGATCATGTCCCCAGAGATCGTTGAGATTGGAGACGAAAGTAAGACGATTATTAGTAGCAGAGACGGTGGTGCAACCGACGTCTATGTCGCCGTTGGTAAAGATGATATAGATGTACTTAAATGGGCCCTTAATCATGCCATCTCACCTGGTTGTTGTGTCTTTCTTGTCCATGTTTTTCCTCCTCTCACCTACATCCCTACACCAGTTGGAAGATTAGCAAGGAGCCAACTAAGCCAAGAACAATTAAGAGTTTATATCAATGAAGAAAACAACAGAAGGAGAAATCTGTTGCAGAAATACATCCGCTTATGCACTGATGCTAAGGTGGCAGTGGACACATTGCTTCTAGAGAGCAACACAACAACCAAAGCAATCCTTCAACTAATTCCAGTGCTCAATATCACCAATTTGGTCATAGGGACCAAAAAGCCACTTTCCACCAGGCTATTAGGAAAAAGAATGGCGACAGGAGAGTTTGTGAAAAAGAATGCACCAGAGTTTTGTGAGGTTACCATTGTTTATGAAGGCAAAAAAATGGATGATCAGCGTCAACAAGAAATGGGGTTGTTTTCTTCTTCTCAAGATTCCGATTGCCGGCGGCGGCGCTCCGGGAAGAACTTGTTCGAGTGTGTTTGCTTGTCGAGCAAGTCGGGTTGCGATTGA

Protein sequence

MELRNRPSKFTNNVLATSMAEKENSFISREKNVRDQIIEAPLELENIPTSELRGKHKQITEARVVANKQRQVDDGGGWCTIMEEEFQGRPTEFQLQCCSARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLKWALNHAISPGCCVFLVHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDAKVAVDTLLLESNTTTKAILQLIPVLNITNLVIGTKKPLSTRLLGKRMATGEFVKKNAPEFCEVTIVYEGKKMDDQRQQEMGLFSSSQDSDCRRRRSGKNLFECVCLSSKSGCD
Homology
[Close]
BLAST of ClCG06G001960 vs. Swiss-Prot
Match: PUB52_ARATH (U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.5e-10
Identity = 47/143 (32.87%), Postives = 73/143 (51.05%), Query Frame = 1 

Query: 139 VLKWALNHAISPGCCVF-LVHVFPPLTYIPTPVG-RLARSQLSQEQLRVYINEENNRRRN 198
           V+ WAL   I  G   F L++V PP++YIPTP+G  +A S+L ++ +  Y  E +     
Sbjct: 37  VVFWALEKFIPEGFTDFKLLYVRPPVSYIPTPMGIAVAVSELREDVVSAYKQELDWSANE 96

Query: 199 LLQKYIRLCTDAKVAVDTLLLESNTTTKAILQLIPVLNITNLVIGTKKPLSTR-LLGKRM 258
           +L+ Y ++    KV V+ LLL+S     AI + I    +T LVIG    +S R    +++
Sbjct: 97  MLRPYKKMFERRKVQVEVLLLDSLEPAAAIAEEIAGTGVTKLVIG----MSLRGFFSRKI 156

Query: 259 ATGEFVKKNAPEFCEVTIVYEGK 279
                +    P FC V ++ +GK
Sbjct: 157 DMSSLIATAVPRFCTVYVISKGK 175

[Close]
BLAST of ClCG06G001960 vs. Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 3.3e-10
Identity = 43/155 (27.74%), Postives = 69/155 (44.52%), Query Frame = 1 

Query: 125 ATDVYVAVGKDDIDVLKWALNHAISPGCCVFLVHVFPPLTYIPTPVGRLARSQLSQEQLR 184
           A D +VA  K     L WAL +      C  L+HV  P   IP    +     + +E++R
Sbjct: 50  AVDKHVAKSKS---TLIWALQNTGGKKIC--LIHVHQPSQMIPLMGAKFPVGAVKEEEVR 109

Query: 185 VYINEENNRRRNLLQKYIRLCTDAKVAVDTLLLESNTTTKAILQLIPVLNITNLVIG--T 244
           V+  +E  +   +L  Y+R+C    V  + + +E  +    I+QLI  L I  LV+G   
Sbjct: 110 VFREKEREKVHMILDDYLRICQQRGVRAEKMFIEMESIENGIVQLISELGIRKLVMGAAA 169

Query: 245 KKPLSTRLLGKRMATGEFVKKNAPEFCEVTIVYEG 278
            +  S R+   +     FV++ AP  C++    +G
Sbjct: 170 DRHYSRRMTDLKSRKAIFVRREAPTLCQIWFTCKG 199

[Close]
BLAST of ClCG06G001960 vs. Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 1.4e-08
Identity = 44/167 (26.35%), Postives = 76/167 (45.51%), Query Frame = 1 

Query: 114 SKTIISSRDGGATDVYVAVGKDDIDVLKWALNHAISPGCCVF-LVHVFPPLTYIPTPVGR 173
           S+T++ +  G +   YV           WA+    + G   F L+H+ P +T +PTP+G 
Sbjct: 19  SRTVVVALSGSSKSKYVVT---------WAIEKFATEGNVGFKLLHIHPMITSVPTPMGN 78

Query: 174 -LARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDAKVAVDTLLLESNTTTKAILQLIP 233
            +  S++  + +  Y  E   +   +L+ Y +L    KVAV+ L++ES+    AI + + 
Sbjct: 79  AIPISEVRDDVVTAYRQEILWQSEEMLKPYTKLFVRRKVAVEVLVIESDNVAAAIAEEVT 138

Query: 234 VLNITNLVIGTKKPLSTRLLGKRMATGEFVKKNAPEFCEVTIVYEGK 279
             +I  +VIG     S     ++      +    P FC V +V +GK
Sbjct: 139 RDSIDRIVIGGS---SRSFFSRKADICSVISALMPNFCTVYVVSKGK 173

[Close]
BLAST of ClCG06G001960 vs. TrEMBL
Match: A0A0A0LNU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004060 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 5.2e-116
Identity = 213/240 (88.75%), Postives = 226/240 (94.17%), Query Frame = 1 

Query: 82  MEEEFQGRPTEFQLQCCSARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLK 141
           MEEEFQGR TE QLQC SARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLK
Sbjct: 1   MEEEFQGRATELQLQCYSARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLK 60

Query: 142 WALNHAISPGCCVFLVHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKY 201
           WAL+HA+SPGCCVFL+HVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKY
Sbjct: 61  WALDHAVSPGCCVFLLHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKY 120

Query: 202 IRLCTDAKVAVDTLLLESNTTTKAILQLIPVLNITNLVIGTKKPLSTRLLGKRMATGEFV 261
           IRLCTDAKV VDTLLLESNTT KAILQLIPVLNITNLVIGTKKPLS++LLGKRM  GEFV
Sbjct: 121 IRLCTDAKVTVDTLLLESNTTAKAILQLIPVLNITNLVIGTKKPLSSKLLGKRMTKGEFV 180

Query: 262 KKNAPEFCEVTIVYEGKKMDDQRQQEMGLFSSSQDSDCRRRRSGKNLFECVCLSSKSGCD 321
           KKNAPE+CEVT+VYEGKK+ ++ QQEMGL  SS+DS  R++RSGKNLFECVCLSSKS CD
Sbjct: 181 KKNAPEYCEVTVVYEGKKV-NECQQEMGLLPSSKDSGLRQQRSGKNLFECVCLSSKSSCD 239

[Close]
BLAST of ClCG06G001960 vs. TrEMBL
Match: A0A0A0KFB5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G093610 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 3.0e-111
Identity = 206/239 (86.19%), Postives = 220/239 (92.05%), Query Frame = 1 

Query: 82  MEEEFQGRPTEFQLQCCSARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLK 141
           MEE+FQGRPTE QLQC SARI+SPEIVEIG+ESKTIISSRD  ATDVYVAVGKDDIDVLK
Sbjct: 1   MEEDFQGRPTELQLQCFSARIVSPEIVEIGEESKTIISSRDSAATDVYVAVGKDDIDVLK 60

Query: 142 WALNHAISPGCCVFLVHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKY 201
           WALNH +SPGCCVFLVHVFP LTYIPTPVGRLARSQLS+EQLRVYINEENNRRRNLLQKY
Sbjct: 61  WALNHVVSPGCCVFLVHVFPLLTYIPTPVGRLARSQLSREQLRVYINEENNRRRNLLQKY 120

Query: 202 IRLCTDAKVAVDTLLLESNTTTKAILQLIPVLNITNLVIGTKKPLSTRLLGKRMATGEFV 261
           IRLCTDAKV VDTLLLESNTTTKAILQLIPVLNITNLVIGTK+PLSTRLLGKRM TGE V
Sbjct: 121 IRLCTDAKVTVDTLLLESNTTTKAILQLIPVLNITNLVIGTKRPLSTRLLGKRMRTGEIV 180

Query: 262 KKNAPEFCEVTIVYEGKKMDDQRQQEMGLFSSSQDSDCRRRRSGKNLFECVCLSSKSGC 321
           KK APEFCEV+IVYEGKK+ D+ QQ+MGL +SSQ+SDCR R   KNLF+ VCL+S SGC
Sbjct: 181 KKKAPEFCEVSIVYEGKKL-DEHQQQMGLLTSSQNSDCRPRGYRKNLFDWVCLTSSSGC 238

[Close]
BLAST of ClCG06G001960 vs. TrEMBL
Match: D7SHK4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g09150 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.9e-79
Identity = 157/238 (65.97%), Postives = 187/238 (78.57%), Query Frame = 1 

Query: 83  EEEFQGRPTEFQLQCCSARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLKW 142
           EE ++ +  E+Q Q  S  + SPEIVEIG++SK+  SSR+GG  DVYVAVG+DD+DVLKW
Sbjct: 3   EENYKKQAEEWQYQ--SMPMKSPEIVEIGEDSKSFTSSREGGFKDVYVAVGRDDLDVLKW 62

Query: 143 ALNHAISPGCCVFLVHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYI 202
           AL+H++SP   +FLVHVFPP TYI TPVGRL+RSQLS+EQL+VYINEENNRRRNLLQKYI
Sbjct: 63  ALDHSVSPQARIFLVHVFPPQTYISTPVGRLSRSQLSKEQLKVYINEENNRRRNLLQKYI 122

Query: 203 RLCTDAKVAVDTLLLESNTTTKAILQLIPVLNITNLVIGTKKPLSTRLLGKRMATGEFVK 262
           RLCTDAKV VDT+LLESNTTTKAIL LIPVLNITNLVIGTK+P   R   K++ TGEF++
Sbjct: 123 RLCTDAKVTVDTMLLESNTTTKAILDLIPVLNITNLVIGTKRPPCPRRSWKKLGTGEFIQ 182

Query: 263 KNAPEFCEVTIVYEGKKMDDQRQQEMGLFSSSQDSDCR---RRRSGKNLFECVCLSSK 318
           KNAPEFCEVTIV++GKK+ D  Q    + SS   S  +    R S +N FEC C S K
Sbjct: 183 KNAPEFCEVTIVFDGKKVLDGEQVGELVHSSPASSHRKPETTRNSERNFFECACFSGK 238

[Close]
BLAST of ClCG06G001960 vs. TrEMBL
Match: B9RAV7_RICCO (ATP binding protein, putative OS=Ricinus communis GN=RCOM_1508900 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 6.3e-77
Identity = 154/239 (64.44%), Postives = 184/239 (76.99%), Query Frame = 1 

Query: 82  MEEEFQG--RPTEFQLQCCSARIMSPEIVEIGDESKTIISSRDGGA-TDVYVAVGKDDID 141
           MEEE      P      C SARIMS EIVEIGD+S++I SSRDGG   DVYVAVGKDD+ 
Sbjct: 1   MEEEKPSCALPVNSTQYCNSARIMSSEIVEIGDDSRSIASSRDGGCFLDVYVAVGKDDLH 60

Query: 142 VLKWALNHAISPGCCVFLVHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLL 201
           VLKWAL+ A+SPG  VFLVHVFPP+TYIPTPVGRL+RSQLSQ+Q+R YINEE+NRRR++L
Sbjct: 61  VLKWALDRAVSPGTRVFLVHVFPPITYIPTPVGRLSRSQLSQDQVRFYINEEHNRRRSIL 120

Query: 202 QKYIRLCTDAKVAVDTLLLESNTTTKAILQLIPVLNITNLVIGTKKPLSTRLLGKRMATG 261
           QKYIRLC DAKV VDT+L+ESN T KAIL LIPVLNITNLV+GT +P  +RLL KR+A  
Sbjct: 121 QKYIRLCNDAKVTVDTMLIESNETAKAILDLIPVLNITNLVMGTTRPPRSRLLRKRLAKA 180

Query: 262 EFVKKNAPEFCEVTIVYEGKKMDDQRQQEMGLFSSSQDSDCRRRRSGKNLFECVCLSSK 318
           EFVKKNAP++CEVT+V++ KK+ + ++      SSS       R S +  FECVC SS+
Sbjct: 181 EFVKKNAPDYCEVTVVHDEKKIAESKEVVHSSLSSSTRRPDITRNSDRKFFECVCFSSR 239

[Close]
BLAST of ClCG06G001960 vs. TrEMBL
Match: A5BVE4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010065 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 4.5e-75
Identity = 145/206 (70.39%), Postives = 173/206 (83.98%), Query Frame = 1 

Query: 83  EEEFQGRPTEFQLQCCSARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLKW 142
           EE ++ +  E+Q Q  S  + SPEIVEIG++SK+  SSR+GG  DVYVAVG+DD+DVLKW
Sbjct: 3   EENYKKQAEEWQYQ--SMPMKSPEIVEIGEDSKSFTSSREGGFKDVYVAVGRDDLDVLKW 62

Query: 143 ALNHAISPGCCVFLVHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYI 202
           AL+H++SP   +FLVHVFPP TYI TPVGRL+RSQLS+EQL+ YINEENNRRRNLLQKYI
Sbjct: 63  ALDHSVSPQARIFLVHVFPPQTYISTPVGRLSRSQLSKEQLKXYINEENNRRRNLLQKYI 122

Query: 203 RLCTDAKVAVDTLLLESNTTTKAILQLIPVLNITNLVIGTKKPLSTRLLGKRMATGEFVK 262
           RLCTDAKV VDT+LLESNTTTKAIL LIPVLNITNLVIGTK+P   R   K++ TGEF++
Sbjct: 123 RLCTDAKVTVDTMLLESNTTTKAILDLIPVLNITNLVIGTKRPPCPRRSWKKLGTGEFIQ 182

Query: 263 KNAPEFCEVTIVYEGKKMDDQRQQEM 289
           KNAPEFCEVTIV++GKK+ D  Q+ M
Sbjct: 183 KNAPEFCEVTIVFDGKKVLDGEQRNM 206

[Close]
BLAST of ClCG06G001960 vs. TAIR10
Match: AT5G47740.2 (AT5G47740.2 Adenine nucleotide alpha hydrolases-like superfamily protein)

HSP 1 Score: 119.4 bits (298), Expect = 4.1e-27
Identity = 70/203 (34.48%), Postives = 122/203 (60.10%), Query Frame = 1 

Query: 124 GATDVYVAVGKDD--IDVLKWALNHAI-SPGCCVFLVHVFPPLTYIPTPVGRLARSQLSQ 183
           G  +VYV VGK D  ++ L+WA+++ + S    +FL+HVFP   +IP P+GR+ R + SQ
Sbjct: 41  GEDNVYVGVGKGDSSMEALRWAIDNLMTSSSTLLFLIHVFPETRFIPYPLGRITRERASQ 100

Query: 184 EQLRVYINEENNRRRNLLQKYIRLCTDAK--VAVDTLLLESNTTTKAILQLIPVLNITNL 243
           EQ+  ++++E  +RR LL K++  C+ +K  V V+T+L+ES++  KA+  LI +LNI  L
Sbjct: 101 EQVESFMSQEREKRRTLLLKFLHACSASKEQVKVETILVESDSVAKAVQDLITILNIRKL 160

Query: 244 VIGTKKPLSTRL-LGKRMATGEFV-KKNAPEFCEVTIVYEGKKMDDQRQQEMGLFSSSQD 303
           V+G  K  + +    K  +  E + + +A + CEV ++ +GK+++   +Q M   S ++ 
Sbjct: 161 VLGIDKSNARKASTMKGNSVPELIMRSSAADVCEVKVICQGKEIN--MEQTMMESSPAKS 220

Query: 304 SDCRRRRSGKNL--FECVCLSSK 318
              +R++  + +  F C+C  SK
Sbjct: 221 PIVQRQKKDQPVDPFACICFISK 241

[Close]
BLAST of ClCG06G001960 vs. TAIR10
Match: AT5G65500.1 (AT5G65500.1 U-box domain-containing protein kinase family protein)

HSP 1 Score: 70.1 bits (170), Expect = 2.8e-12
Identity = 53/157 (33.76%), Postives = 76/157 (48.41%), Query Frame = 1 

Query: 128 VYVAVGKD---DIDVLKWALNHAISPGCCVFLVHVFP-PLTYIPTPVGRLARSQLSQEQL 187
           VY+AVG D       + WAL    +    + L+H+      ++ TP G+L  S +S+E+L
Sbjct: 22  VYIAVGNDVQEGYKTIHWALKKWNNIPISIVLLHLCNISQDFVYTPFGKLPASSVSEEKL 81

Query: 188 RVYINEENNRRRNLLQKYIRLCTDAKVAVDTLLLESNTTTKAILQLIPVLNITNLVIG-T 247
           +V    E+ +   LL KYI  C   K  +  +  + ++    IL LI  L IT LV+G T
Sbjct: 82  QVLRKYEDQKIDKLLSKYITFCGKVKAELLKVEKQHDSIQVLILDLISKLRITKLVMGIT 141

Query: 248 KKPLSTRLLGKRMATGEF-VKKNAPEFCEVTIVYEGK 279
               S+    K   +G F V +N PEFCE  I+  GK
Sbjct: 142 FMRSSSSWKSKSAISGSFYVYQNKPEFCEFYIICGGK 178

[Close]
BLAST of ClCG06G001960 vs. TAIR10
Match: AT5G61550.2 (AT5G61550.2 U-box domain-containing protein kinase family protein)

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-11
Identity = 47/143 (32.87%), Postives = 73/143 (51.05%), Query Frame = 1 

Query: 139 VLKWALNHAISPGCCVF-LVHVFPPLTYIPTPVG-RLARSQLSQEQLRVYINEENNRRRN 198
           V+ WAL   I  G   F L++V PP++YIPTP+G  +A S+L ++ +  Y  E +     
Sbjct: 37  VVFWALEKFIPEGFTDFKLLYVRPPVSYIPTPMGIAVAVSELREDVVSAYKQELDWSANE 96

Query: 199 LLQKYIRLCTDAKVAVDTLLLESNTTTKAILQLIPVLNITNLVIGTKKPLSTR-LLGKRM 258
           +L+ Y ++    KV V+ LLL+S     AI + I    +T LVIG    +S R    +++
Sbjct: 97  MLRPYKKMFERRKVQVEVLLLDSLEPAAAIAEEIAGTGVTKLVIG----MSLRGFFSRKI 156

Query: 259 ATGEFVKKNAPEFCEVTIVYEGK 279
                +    P FC V ++ +GK
Sbjct: 157 DMSSLIATAVPRFCTVYVISKGK 175

[Close]
BLAST of ClCG06G001960 vs. TAIR10
Match: AT4G25160.1 (AT4G25160.1 U-box domain-containing protein kinase family protein)

HSP 1 Score: 62.0 bits (149), Expect = 7.7e-10
Identity = 44/167 (26.35%), Postives = 76/167 (45.51%), Query Frame = 1 

Query: 114 SKTIISSRDGGATDVYVAVGKDDIDVLKWALNHAISPGCCVF-LVHVFPPLTYIPTPVGR 173
           S+T++ +  G +   YV           WA+    + G   F L+H+ P +T +PTP+G 
Sbjct: 19  SRTVVVALSGSSKSKYVVT---------WAIEKFATEGNVGFKLLHIHPMITSVPTPMGN 78

Query: 174 -LARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDAKVAVDTLLLESNTTTKAILQLIP 233
            +  S++  + +  Y  E   +   +L+ Y +L    KVAV+ L++ES+    AI + + 
Sbjct: 79  AIPISEVRDDVVTAYRQEILWQSEEMLKPYTKLFVRRKVAVEVLVIESDNVAAAIAEEVT 138

Query: 234 VLNITNLVIGTKKPLSTRLLGKRMATGEFVKKNAPEFCEVTIVYEGK 279
             +I  +VIG     S     ++      +    P FC V +V +GK
Sbjct: 139 RDSIDRIVIGGS---SRSFFSRKADICSVISALMPNFCTVYVVSKGK 173

[Close]
BLAST of ClCG06G001960 vs. TAIR10
Match: AT2G24370.1 (AT2G24370.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-08
Identity = 48/169 (28.40%), Postives = 77/169 (45.56%), Query Frame = 1 

Query: 118 ISSRDGGATDVY-VAVGKDDID--VLKWALNHAISPGCCVFLVHVFPPLTYIPTPVGRLA 177
           +  ++GG++ V  VA+ KD      LKWA+++ +  G  V LVHV       P+P+   A
Sbjct: 9   VGVKEGGSSGVVAVAIDKDKSSQHALKWAVDNLLQRGQSVILVHV----KLRPSPLNNSA 68

Query: 178 -----RSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDAKVAVDTLLLESNTTTKAILQL 237
                 ++LSQ+   V  + E   +   L  +   CT   +    +LLE +   KA+++ 
Sbjct: 69  SLHASSAKLSQDSSLVCRDPEGISKEIFL-PFRCFCTRKDIQCQDVLLEESDVAKALVEY 128

Query: 238 IPVLNITNLVIGTKKPLSTRLLGKRMATGEFVKKNAPEFCEVTIVYEGK 279
           +    I  LV+G+          K       + KNAP+FC V I+ +GK
Sbjct: 129 VNQAAIEVLVVGSSSKGGFLRFNKPTDIPGSITKNAPDFCTVYIISKGK 172

[Close]
BLAST of ClCG06G001960 vs. NCBI nr
Match: gi|449440638|ref|XP_004138091.1| (PREDICTED: U-box domain-containing protein 52 [Cucumis sativus])

HSP 1 Score: 425.6 bits (1093), Expect = 7.5e-116
Identity = 213/240 (88.75%), Postives = 226/240 (94.17%), Query Frame = 1 

Query: 82  MEEEFQGRPTEFQLQCCSARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLK 141
           MEEEFQGR TE QLQC SARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLK
Sbjct: 1   MEEEFQGRATELQLQCYSARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLK 60

Query: 142 WALNHAISPGCCVFLVHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKY 201
           WAL+HA+SPGCCVFL+HVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKY
Sbjct: 61  WALDHAVSPGCCVFLLHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKY 120

Query: 202 IRLCTDAKVAVDTLLLESNTTTKAILQLIPVLNITNLVIGTKKPLSTRLLGKRMATGEFV 261
           IRLCTDAKV VDTLLLESNTT KAILQLIPVLNITNLVIGTKKPLS++LLGKRM  GEFV
Sbjct: 121 IRLCTDAKVTVDTLLLESNTTAKAILQLIPVLNITNLVIGTKKPLSSKLLGKRMTKGEFV 180

Query: 262 KKNAPEFCEVTIVYEGKKMDDQRQQEMGLFSSSQDSDCRRRRSGKNLFECVCLSSKSGCD 321
           KKNAPE+CEVT+VYEGKK+ ++ QQEMGL  SS+DS  R++RSGKNLFECVCLSSKS CD
Sbjct: 181 KKNAPEYCEVTVVYEGKKV-NECQQEMGLLPSSKDSGLRQQRSGKNLFECVCLSSKSSCD 239

[Close]
BLAST of ClCG06G001960 vs. NCBI nr
Match: gi|659129071|ref|XP_008464515.1| (PREDICTED: U-box domain-containing protein 52-like [Cucumis melo])

HSP 1 Score: 425.2 bits (1092), Expect = 9.8e-116
Identity = 214/240 (89.17%), Postives = 225/240 (93.75%), Query Frame = 1 

Query: 82  MEEEFQGRPTEFQLQCCSARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLK 141
           MEEEFQGR TE QLQC SARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLK
Sbjct: 1   MEEEFQGRATELQLQCYSARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLK 60

Query: 142 WALNHAISPGCCVFLVHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKY 201
           WAL+HA+SPGCCVFL+HVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKY
Sbjct: 61  WALDHAVSPGCCVFLLHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKY 120

Query: 202 IRLCTDAKVAVDTLLLESNTTTKAILQLIPVLNITNLVIGTKKPLSTRLLGKRMATGEFV 261
           IRLCTDAKV VDTLLLE NTT KAILQLIPVLNITNLVIGTKKPLST+LLGKRM  GEFV
Sbjct: 121 IRLCTDAKVTVDTLLLEGNTTAKAILQLIPVLNITNLVIGTKKPLSTKLLGKRMTKGEFV 180

Query: 262 KKNAPEFCEVTIVYEGKKMDDQRQQEMGLFSSSQDSDCRRRRSGKNLFECVCLSSKSGCD 321
           KKNAPE+CEVTIVYEGKK+ ++ QQEMGL  SS+ SD ++RRSGKNLFECVCLSSKS CD
Sbjct: 181 KKNAPEYCEVTIVYEGKKV-NECQQEMGLLPSSKVSDLQQRRSGKNLFECVCLSSKSSCD 239

[Close]
BLAST of ClCG06G001960 vs. NCBI nr
Match: gi|659119838|ref|XP_008459869.1| (PREDICTED: U-box domain-containing protein 36-like isoform X1 [Cucumis melo])

HSP 1 Score: 422.2 bits (1084), Expect = 8.3e-115
Identity = 209/239 (87.45%), Postives = 224/239 (93.72%), Query Frame = 1 

Query: 82  MEEEFQGRPTEFQLQCCSARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLK 141
           MEE+FQGRPTE QLQC SARIMSPEIVEIG+ESKTIISSRDG ATDVYVAVGKDDIDVLK
Sbjct: 53  MEEDFQGRPTELQLQCFSARIMSPEIVEIGEESKTIISSRDGAATDVYVAVGKDDIDVLK 112

Query: 142 WALNHAISPGCCVFLVHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKY 201
           WALNH +SPGCCVFLVHVFP LTYIPTPVGRLARSQL++EQLRVYINEENNRRRNLL+KY
Sbjct: 113 WALNHVVSPGCCVFLVHVFPLLTYIPTPVGRLARSQLTREQLRVYINEENNRRRNLLEKY 172

Query: 202 IRLCTDAKVAVDTLLLESNTTTKAILQLIPVLNITNLVIGTKKPLSTRLLGKRMATGEFV 261
           IRLCTDAKV VDTLLLESNTTTKAIL+LIPVLNITNLV+GTK PLSTRLLGKRM TGE V
Sbjct: 173 IRLCTDAKVKVDTLLLESNTTTKAILRLIPVLNITNLVMGTKTPLSTRLLGKRMRTGEIV 232

Query: 262 KKNAPEFCEVTIVYEGKKMDDQRQQEMGLFSSSQDSDCRRRRSGKNLFECVCLSSKSGC 321
           KK APEFCEVTIVYEGKK+D+ +QQ+MGL SSSQ+SDCR RR GKNLF+ VCLSS+SGC
Sbjct: 233 KKKAPEFCEVTIVYEGKKVDEHQQQQMGLLSSSQNSDCRPRRYGKNLFDWVCLSSRSGC 291

[Close]
BLAST of ClCG06G001960 vs. NCBI nr
Match: gi|449445772|ref|XP_004140646.1| (PREDICTED: U-box domain-containing protein 33-like isoform X1 [Cucumis sativus])

HSP 1 Score: 409.8 bits (1052), Expect = 4.3e-111
Identity = 206/239 (86.19%), Postives = 220/239 (92.05%), Query Frame = 1 

Query: 82  MEEEFQGRPTEFQLQCCSARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLK 141
           MEE+FQGRPTE QLQC SARI+SPEIVEIG+ESKTIISSRD  ATDVYVAVGKDDIDVLK
Sbjct: 1   MEEDFQGRPTELQLQCFSARIVSPEIVEIGEESKTIISSRDSAATDVYVAVGKDDIDVLK 60

Query: 142 WALNHAISPGCCVFLVHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKY 201
           WALNH +SPGCCVFLVHVFP LTYIPTPVGRLARSQLS+EQLRVYINEENNRRRNLLQKY
Sbjct: 61  WALNHVVSPGCCVFLVHVFPLLTYIPTPVGRLARSQLSREQLRVYINEENNRRRNLLQKY 120

Query: 202 IRLCTDAKVAVDTLLLESNTTTKAILQLIPVLNITNLVIGTKKPLSTRLLGKRMATGEFV 261
           IRLCTDAKV VDTLLLESNTTTKAILQLIPVLNITNLVIGTK+PLSTRLLGKRM TGE V
Sbjct: 121 IRLCTDAKVTVDTLLLESNTTTKAILQLIPVLNITNLVIGTKRPLSTRLLGKRMRTGEIV 180

Query: 262 KKNAPEFCEVTIVYEGKKMDDQRQQEMGLFSSSQDSDCRRRRSGKNLFECVCLSSKSGC 321
           KK APEFCEV+IVYEGKK+ D+ QQ+MGL +SSQ+SDCR R   KNLF+ VCL+S SGC
Sbjct: 181 KKKAPEFCEVSIVYEGKKL-DEHQQQMGLLTSSQNSDCRPRGYRKNLFDWVCLTSSSGC 238

[Close]
BLAST of ClCG06G001960 vs. NCBI nr
Match: gi|659119840|ref|XP_008459870.1| (PREDICTED: uncharacterized protein LOC103498862 isoform X2 [Cucumis melo])

HSP 1 Score: 370.5 bits (950), Expect = 2.9e-99
Identity = 192/239 (80.33%), Postives = 208/239 (87.03%), Query Frame = 1 

Query: 82  MEEEFQGRPTEFQLQCCSARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLK 141
           MEE+FQGRPTE QLQC SARIMSPEIVEIG+ESKTIISSRDG ATDVYVAVGKDDIDVLK
Sbjct: 53  MEEDFQGRPTELQLQCFSARIMSPEIVEIGEESKTIISSRDGAATDVYVAVGKDDIDVLK 112

Query: 142 WALNHAISPGCCVFLVHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKY 201
           WALNH +SP         F   +     VGRLARSQL++EQLRVYINEENNRRRNLL+KY
Sbjct: 113 WALNHVVSPDHN----QRFADQSSTTFLVGRLARSQLTREQLRVYINEENNRRRNLLEKY 172

Query: 202 IRLCTDAKVAVDTLLLESNTTTKAILQLIPVLNITNLVIGTKKPLSTRLLGKRMATGEFV 261
           IRLCTDAKV VDTLLLESNTTTKAIL+LIPVLNITNLV+GTK PLSTRLLGKRM TGE V
Sbjct: 173 IRLCTDAKVKVDTLLLESNTTTKAILRLIPVLNITNLVMGTKTPLSTRLLGKRMRTGEIV 232

Query: 262 KKNAPEFCEVTIVYEGKKMDDQRQQEMGLFSSSQDSDCRRRRSGKNLFECVCLSSKSGC 321
           KK APEFCEVTIVYEGKK+D+ +QQ+MGL SSSQ+SDCR RR GKNLF+ VCLSS+SGC
Sbjct: 233 KKKAPEFCEVTIVYEGKKVDEHQQQQMGLLSSSQNSDCRPRRYGKNLFDWVCLSSRSGC 287

The following BLAST results are available for this feature:
BLAST of ClCG06G001960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PUB52_ARATH2.5e-1032.87U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1[more]
PUB33_ARATH3.3e-1027.74U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2[more]
PUB35_ARATH1.4e-0826.35U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2[more]
BLAST of ClCG06G001960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNU1_CUCSA5.2e-11688.75Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004060 PE=4 SV=1[more]
A0A0A0KFB5_CUCSA3.0e-11186.19Uncharacterized protein OS=Cucumis sativus GN=Csa_6G093610 PE=4 SV=1[more]
D7SHK4_VITVI3.9e-7965.97Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g09150 PE=4 SV=... [more]
B9RAV7_RICCO6.3e-7764.44ATP binding protein, putative OS=Ricinus communis GN=RCOM_1508900 PE=4 SV=1[more]
A5BVE4_VITVI4.5e-7570.39Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010065 PE=4 SV=1[more]
BLAST of ClCG06G001960 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G47740.24.1e-2734.48 Adenine nucleotide alpha hydrolases-like superfamily protein[more]
AT5G65500.12.8e-1233.76 U-box domain-containing protein kinase family protein[more]
AT5G61550.21.4e-1132.87 U-box domain-containing protein kinase family protein[more]
AT4G25160.17.7e-1026.35 U-box domain-containing protein kinase family protein[more]
AT2G24370.11.1e-0828.40 Protein kinase protein with adenine nucleotide alpha hydrolases-like... [more]
BLAST of ClCG06G001960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449440638|ref|XP_004138091.1|7.5e-11688.75PREDICTED: U-box domain-containing protein 52 [Cucumis sativus][more]
gi|659129071|ref|XP_008464515.1|9.8e-11689.17PREDICTED: U-box domain-containing protein 52-like [Cucumis melo][more]
gi|659119838|ref|XP_008459869.1|8.3e-11587.45PREDICTED: U-box domain-containing protein 36-like isoform X1 [Cucumis melo][more]
gi|449445772|ref|XP_004140646.1|4.3e-11186.19PREDICTED: U-box domain-containing protein 33-like isoform X1 [Cucumis sativus][more]
gi|659119840|ref|XP_008459870.1|2.9e-9980.33PREDICTED: uncharacterized protein LOC103498862 isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006950 response to stress
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016787 hydrolase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG06G001960.1ClCG06G001960.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3DG3DSA:3.40.50.620coord: 136..253
score: 3.9
NoneNo IPR availablePANTHERPTHR31964FAMILY NOT NAMEDcoord: 110..293
score: 9.9E
NoneNo IPR availablePANTHERPTHR31964:SF53SUBFAMILY NOT NAMEDcoord: 110..293
score: 9.9E
NoneNo IPR availableunknownSSF52402Adenine nucleotide alpha hydrolases-likecoord: 135..243
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG06G001960Csa6G093610Cucumber (Chinese Long) v2cuwcgB476
ClCG06G001960MELO3C022333Melon (DHL92) v3.5.1mewcgB124
ClCG06G001960Cla001504Watermelon (97103) v1wcgwmB345
ClCG06G001960Cla97C06G111290Watermelon (97103) v2wcgwmbB273
ClCG06G001960Bhi12G002155Wax gourdwcgwgoB491
ClCG06G001960CSPI06G07640Wild cucumber (PI 183967)cpiwcgB503
ClCG06G001960Cucsa.349480Cucumber (Gy14) v1cgywcgB595
ClCG06G001960Lsi09G017450Bottle gourd (USVL1VR-Ls)lsiwcgB029
ClCG06G001960MELO3C022333.2Melon (DHL92) v3.6.1medwcgB119
ClCG06G001960CsaV3_6G008020Cucumber (Chinese Long) v3cucwcgB497
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG06G001960Wax gourdwcgwgoB532
ClCG06G001960Watermelon (Charleston Gray)wcgwcgB163
ClCG06G001960Watermelon (Charleston Gray)wcgwcgB173
ClCG06G001960Cucurbita maxima (Rimu)cmawcgB322
ClCG06G001960Cucurbita maxima (Rimu)cmawcgB805
ClCG06G001960Cucurbita moschata (Rifu)cmowcgB318
ClCG06G001960Cucurbita moschata (Rifu)cmowcgB800
ClCG06G001960Wild cucumber (PI 183967)cpiwcgB254
ClCG06G001960Cucumber (Chinese Long) v2cuwcgB244
ClCG06G001960Melon (DHL92) v3.5.1mewcgB444
ClCG06G001960Cucurbita pepo (Zucchini)cpewcgB298
ClCG06G001960Cucurbita pepo (Zucchini)cpewcgB402
ClCG06G001960Cucurbita pepo (Zucchini)cpewcgB564
ClCG06G001960Cucurbita pepo (Zucchini)cpewcgB789
ClCG06G001960Cucumber (Gy14) v2cgybwcgB229
ClCG06G001960Cucumber (Gy14) v2cgybwcgB438
ClCG06G001960Silver-seed gourdcarwcgB0013
ClCG06G001960Silver-seed gourdcarwcgB0669
ClCG06G001960Silver-seed gourdcarwcgB0956