ClCG06G001940 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG06G001940
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Peptidyl-prolyl cis-trans isomerase
Location	CG_Chr06 : 2077690 .. 2083970 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTATCAACGGAGCTGCTCTCCTCTCCTTTTCACTTTCCAGCACAAATCTCCATCCATGGCGGCTTCTTTTGCTACTACGCCTCTGGTAAACTTTCTTTTCCTTTAATCTCCATTTTCCACTTCCGTTTCGTTTCAATTGATTTTCCTTTTCCCACTCCAAGGTTGGCTTCGTTTCTGCTTCCAATACCGTCTCGCAAACCAAAGCTTCAGGCCCGTCTAATTCGGTTAAGCTTCATACGCTTCAATTGCCTTCGAATCTTTCGTCCTCGTCCAGTTTTCTGCCCGCTTCGTTGCGTTTTCCTTCTCTGACAACTTCTTTTAATCCGTTGTCTTCGAGGAATGCTGTTCGTAGCTCCGTCCGAGCTAGTGCTGAGGTTAGCAACATGCTATTGTTTTTCTGTACAATTAGTTGCTATGCATTTGAAATGAAAGCAAGGCTTCACTCAAAGATTGAAAATGGCAACATTGATCTTCTTTCTTTGATTTAGGTACCTCCTCTACAAGCCAAAGTAACAAACAAGGTATATTTCGATGTGAGCATTGGTAATCCAGTAGGGAAACTTGCTGGGAGGATTGTGATTGGATTATTTGGGGATGATGTCCCCAAAACGGCAGAGAACTTCCGTGCTCTTTGCACAGGTAATAGACATTTATATATATATATATATATATATATATATATATATATTATGAGACATTTAGTTGTTTACCTCTTACCCATAGAAATTCAAGTCAGCTTCCGGATGTAATGTAACCAACTTTACTAACTTTATTAGGAGAGAAGGGCTTTGGATTCAAAGGTTCTGCCTTTCATCGTGTAATCAGAGATTTCATGATACAAGGGGGTGACTTTGACAAGGGAAATGTGAGTGCTCTCTAATGCATGTGTATCATTTATTATTTTATTCACCAGGTCAAGAATTCCCACTTTCTTTTGACACAGTACCAATAAAATTCATATCTTGTTATAGGTTCTTTTTCAAAAAATGTTCTCATTAGTTGCTCACTGAAATATCCGAACTGTTTTGTTGTCGATTGGTCATTTGGTGATTTCCTATCTAGGAGGTAGGAGTAGTAGTGCTATGGGGTTGGATATGCACATAGAATCACGATTGCCGTAAATGGCACATATTTCTCATCAGTTGGTAAGTTTGTGAACTATTATTGGGTTCGTATAGGGAGCTTGTGTATGCTATTCGACACAGTGAAAGAATTTAGGCTAAAATTTTAGAATGAAGAGAAAATTTGAAAGCAGCTTTTCCTATTGTGTGCTATGGCACTTTGCTTGATTGGAGCTTGACACTTACAAAGGGTGGAAAACACCTCTATTTATAGGTGTTTAGGAAGGACTGTGGAGAGTTCTAAAATTAATGTCCTAGGTACTAGAAATTGAGGAAAATACATAATCCTTTCACGTTCCAAAAGATTCGAAGAATAAGTCAAAAGGCTCTTTGGAAATTGGAAATTATATTTAGCAAAGCTAGCTTAACATGGATTTGCTAAGATAATTTACATCCCCACCTACCTGAATAGAAAAAGAAGAGGTACTTGGTTGTGTTATTTGTCGCCAGACTATTATGAAATCTCTCTCTTTCTCACTCTCTTTTTTTTTGTTTACAATGCAGTGTTTCAAATAAATATTCCTGGAGAGCACTATGGTTTTTGTAGTAATGATATACTCCTTTTGTTTTGTTTAAAAATTTTTCTATGAAGTCTAAACTTTGAAGGATACATTTTGTTAATAGACAAATTTTTCTATGAAGTCTAAACTTTGAAGGGTTCAATCCATGGTGGTCACTTACCTAGGAATTAATTTCCTATGAATTTCCTTGACACCCAAATGTTGTAGGGTCAGGCGGGTTGTCCCGTGAGATTAGTCGAGGTGCACGTATGCTGGCCCGGACACTCATGGATATCAAAAAAAATAAAAACTTTGAAGGATACATTTTGTTAATAGACACTGTTTTTAGGTTGAGTGCTGGTTGGTCTGATTGAAAGATTTTGTGAATATGGCGAGTTTTTCATGCTGGTAAAAGAAAAGGAAAAATATTGCCTTTGAACATAATTATAATATGACAATGGGAAGGAAGTCAGAGTATATGCCACTTTTGACATTTATAACAAAGAAGAAAGTACAGGGGAAGCACACAGGTTCAATAATATCTTGTCATGCATGGTATCAAACGCTTGGATTGAAGAGCAGTAGATATTGCGACAGACAAATTTCCTTGGATGATTGATTTGTTATGGGTATAAGATAATTCTTTGGATAAAAGGGAGAGAGATGATGAATTAAAATACTTACACAGTTAGTAAACGCTAAGAATTAAATAGATATTCTCTAAATGGTTTTACAGTCAATGGACCGTGTATTCTTTCATTTTTATCTCAATGAAATTTGTCATTATTTTTTTTAAAGAAATAGAGGTTTACTGTCAATGTTGCATATATTATCTAACACCAGGATCTTAATATATTCTTTCCATGCTTTCCATTATATCAAGGCGTTTATTTATAAATTGGATGTATTCTTATAAAAAAAAATTAGATGAATTCTTCTGAATGAATACTAACCAGATCTTACACTTTTCAGGGAACTGGGGGTAAAAGCATATATGGTCGTACATTTAAAGATGAAAACTTCAAATGTAAGTTAAATCCTATACCTCAGGCCTCAGCTGCTGCTTTCTGTCATCTGTTTCTGTGAACAACTACCAAAATTGCTATTTAACCAAAAAAAGCCTAATTTTATTTTATACCGCATGTCTATTAAGAAATGATTTGACTATTTGCATTACTGGCATGAAATTTCCATGTTGTTAGATGTTTTTTCTTTATATACTTGTATTATATATTGCCCATGTCTTATTGAACATTTAGTTTATATGATTGTTGTCGTCTTTCTTTCTTTCTTTTGTTTTTGTTTTTGGATTTTTTAACAACCTCCTTGAATAATGAAAGAAAACAAAAGGGAGGAGTGAGGAGTGAGGTCTTCACGTAAATTATACCAATTAATTTTCTAATTTATGTTCTGTAGAAAATATCATTTTATTAAATTTATTTTAATTTAATAAATTCTATTTTACATACATGTTTGAGGTTATTTGTGATGAAAATTTTGGTTTTCTTGAAATATCTCATAAATACAACGTGAAAATAGGCATCACCAATGCAGTGCATTTCTCAATTATTTTCTTCAAAAGCTTAGTTATCCTTTTTTAACTGGGAAGTTAAAATTGTAGCTTAGTTCTATGGTAGAGTTTAACTCAAACCTAACTTCTACCGAAAATTCCTTCAAACTCGGTTTCCTTGGTTGTAACAATTGCTCAAAATCATCAAACAACATCCTTGAATCTTCCATTTTAATGCTATGTTTTGCTGTAAACAACTAACTACCTCCCCTTAAAGATCATAGCCCAAGTTTCATGGTTGCAAATTGGAAACTATTTTTGTAGCCCCACTGAATGGGCTTTTTTGTATATCTTTTAGATTATTTCATTCATCAATGAACTCGTTTCTTATAAAAAAAAAACATATATGTATAAAAATCTTCCTTTTCATCCCATGTTTCTTCAGATTTGGAGTTGTCTCTTGCTCTCTCATTGTACGGCAATGACCTTCACTCACCGTGAAGAAAACACGAGGGTTTTTGAAAAATGCCTGTTGTTTCTAAGAATTGTCCAAGCATGTAGCATTATCTTTTTAAAGTACAGAAAAAGAAGGAAAAAAAAAAAAAAAATTCAACGTGGCATGTTTGTACATGCTGTGTGGTGCATAGTTGGGTTGGTTATTTCAATTAGTGTCCAAACTGTGCCTATGTCCAGGTCTGTGGAAGTACCACCTTTGGGCCTTGTCTAGGTACGCAGAACTGTGTCCAAGAATTTGAAGCTACATCAGAACAGTGTTAGCGCCTTCATGCATGTACGCTCTAGTTGTTGAGCTCAGGCATTTGACCTTGGGGAACTGTCAGTGCTTCCCAGGCTTCCATTTTTAGGTCAAAGCCATACATTATCCAATGTCGTACAAACTTCCAGTTATGAGGCTAAACCAACGTATTTATAGCTCTGGCCAGATTGATTTGGATTTTAGTGTACTGTCTTTGAATTTGTTTAAAATTTCCTATGTTATTCAATAAAATGGTTATCCTATTCAAGCAAATTGCTTGTCTTGAGTCATCATTTTATATGATTGACTCATAAATTTCAGGTATCTCCCTTCAAAGTGAACTGTACTTCCTAAATGAATCCTTTGCTTATTGAGTATGAATAGTGCATATGTTCTGTGAAACACGTGTGAACCTTGGTTGGTCTTTTAATCCTTGTCTTAGACAGGTGTTCTGCTAAACATTTTTCTGTTAAGAAAAATTCCACCTTGCTTGACATTTTTTCATTGGAATATTATCAGTTCTTAATGTCGGTATGTTTTGTTCTATATATATATATATATAATATTTTGTTAAGAATTGACCTTTTATTTATTGAAAAGGTTACAGTCTATGTGTTCTACACTTCTAGTGTCCCCTTTACTCAACTCTGGAACATATTCTCCTTTGCAGTGAGTCATACTGGACCAGGAGTTGTCAGCATGGCAAATGCAGGTCCAAATACTAATGGAAGTCAATTTTTCATATGCACTGTCAAGGTACTGTGCGCATAAACTTCGACCATGATATTATAGTCAGCAGCTAGCTCTAGCTCATATAATTATAATGCCTAGTTGTGTTCCTCTACATGGCAATGGTCTCCTTGGGGGAAGAATACGAGTTACATTTATTCTAATATGCTTATTAACTGCAGTTTTGGATTTAGTATAAGTTTATTGAACTTGAAAATGGAGACAATTTGCTGAACCAGCAGCGTCCACCATGTTTTCGGAAAATTGCTTGATTAATTTTCAATTTTAATGACTGGAAGTAATCCTTTTTTTCATTGAGAATATAGTATTACAAATATGGAGTAGAGATTTGAACCTTTGATCTTTAGAAAAAAGTTATTAATACCTTCATCGTTAAACTGCCTTCTTCTTGCTCCGTGATGGTGATTCAGTGAAATACTTGGAGTTGCTATTTGTTGATGCATTTGGGCACAATATCAATGGGTGTGTTGGATATTACATGCAGTATGCAGCCTTGTAGGAATTAGATGAGATTTTTGTATGCCCCTAAATGATTAATGACTCGCCCCAAAAACAAATGGAAATTACCCTTCTGATTACGTCAAAGTGCACAACCACATGTGATATAGTAAACGTTAGGGATGTCTCTTCCATCATAGTCCTAATCCAATGGTCATGTCTATCACGATTTTCATTGTTTCCTTTTGTTGCTAATCCGAAAGCATTTTGATGATGAAAACCCAGCAAAGTTGCTAAAAAAAGAAAACAATGAAAATTACGATAGACATGACCATGGGATTAGGACTATGACAGAAAAGACATCCCTAATGCGATATTGTATAAAATGGGGTAGTGCGCTTTAACAACAGCAGAAAGTTAGTTTTCATTTGTTTTTTAGGGGTGGGTCATTAATCACTAGGCTCTTGGGAGAGGGTCAGGGTCATCTGTACAAAAATTTCAAATTAGATTGTCTCATAAAAGCTTTTAGTTGAGATGTGTTGCTTTTGGTTCTACACAATCTACTTCTCTTCTGTCTCAATAGATTATGTGTTATTTGGTTGGCCAAGTCCTTATTTTTGCATCTATTGCGTGAATGTTAGACCCCATGGCTGGATCAGAGGCATGTGGTTTTTGGGCAAGTCCTGGAAGGATTCGACATTGTTAAGCTAATTGAGTCTCAAGAAACAGACCGTGGGGACCGACCATTGAAGAAGGTTGTCATCAGCGACTGTGGCGAGCTTCCAGTGGCCTGATTTTACCATATATCCAGATAACTAATCCTATCTTGTTCTTCCTTTGGATTAGCTTAATCTTAGTTCAAATGGCCTTTCTTTGAGTCTTTTTGCTTGTAAAATCTATTGTTGGTGAAATTTAGCTCGGGAAGCGGGATTTTATTTGATGAAATTTGATGATGTTTGTGACAGCCACGAGGTTACCTTTTTTTTTTGTTTTTTGTTTTTTTTTGTTGGGAGAGAAATAAAGAGGTCGCCTTAAAAACTATACTCTTCAAGAATCTGTATTTTCCTTTAACTTCTTCGTTGGACTTTTCCCCCTTCTTCCTTTGAGTAAATTTTATTTGGTTTTGACATTGTAGAATTGATAATGTTTTCTATATGTAGTTTATATGTTTACTGAGGAACTCTAATTGGTGTATGGGGACTGGAA

mRNA sequence

CCTTATCAACGGAGCTGCTCTCCTCTCCTTTTCACTTTCCAGCACAAATCTCCATCCATGGCGGCTTCTTTTGCTACTACGCCTCTGGTTGGCTTCGTTTCTGCTTCCAATACCGTCTCGCAAACCAAAGCTTCAGGCCCGTCTAATTCGGTTAAGCTTCATACGCTTCAATTGCCTTCGAATCTTTCGTCCTCGTCCAGTTTTCTGCCCGCTTCGTTGCGTTTTCCTTCTCTGACAACTTCTTTTAATCCGTTGTCTTCGAGGAATGCTGTTCGTAGCTCCGTCCGAGCTAGTGCTGAGGTACCTCCTCTACAAGCCAAAGTAACAAACAAGGTATATTTCGATGTGAGCATTGGTAATCCAGTAGGGAAACTTGCTGGGAGGATTGTGATTGGATTATTTGGGGATGATGTCCCCAAAACGGCAGAGAACTTCCGTGCTCTTTGCACAGGAGAGAAGGGCTTTGGATTCAAAGGTTCTGCCTTTCATCGTGTAATCAGAGATTTCATGATACAAGGGGGTGACTTTGACAAGGGAAATGGAACTGGGGGTAAAAGCATATATGGTCGTACATTTAAAGATGAAAACTTCAAATTGAGTCATACTGGACCAGGAGTTGTCAGCATGGCAAATGCAGGTCCAAATACTAATGGAAGTCAATTTTTCATATGCACTGTCAAGACCCCATGGCTGGATCAGAGGCATGTGGTTTTTGGGCAAGTCCTGGAAGGATTCGACATTGTTAAGCTAATTGAGTCTCAAGAAACAGACCGTGGGGACCGACCATTGAAGAAGGTTGTCATCAGCGACTGTGGCGAGCTTCCAGTGGCCTGATTTTACCATATATCCAGATAACTAATCCTATCTTGTTCTTCCTTTGGATTAGCTTAATCTTAGTTCAAATGGCCTTTCTTTGAGTCTTTTTGCTTGTAAAATCTATTGTTGGTGAAATTTAGCTCGGGAAGCGGGATTTTATTTGATGAAATTTGATGATGTTTGTGACAGCCACGAGGTTACCTTTTTTTTTTGTTTTTTGTTTTTTTTTGTTGGGAGAGAAATAAAGAGGTCGCCTTAAAAACTATACTCTTCAAGAATCTGTATTTTCCTTTAACTTCTTCGTTGGACTTTTCCCCCTTCTTCCTTTGAGTAAATTTTATTTGGTTTTGACATTGTAGAATTGATAATGTTTTCTATATGTAGTTTATATGTTTACTGAGGAACTCTAATTGGTGTATGGGGACTGGAA

Coding sequence (CDS)

CCTTATCAACGGAGCTGCTCTCCTCTCCTTTTCACTTTCCAGCACAAATCTCCATCCATGGCGGCTTCTTTTGCTACTACGCCTCTGGTTGGCTTCGTTTCTGCTTCCAATACCGTCTCGCAAACCAAAGCTTCAGGCCCGTCTAATTCGGTTAAGCTTCATACGCTTCAATTGCCTTCGAATCTTTCGTCCTCGTCCAGTTTTCTGCCCGCTTCGTTGCGTTTTCCTTCTCTGACAACTTCTTTTAATCCGTTGTCTTCGAGGAATGCTGTTCGTAGCTCCGTCCGAGCTAGTGCTGAGGTACCTCCTCTACAAGCCAAAGTAACAAACAAGGTATATTTCGATGTGAGCATTGGTAATCCAGTAGGGAAACTTGCTGGGAGGATTGTGATTGGATTATTTGGGGATGATGTCCCCAAAACGGCAGAGAACTTCCGTGCTCTTTGCACAGGAGAGAAGGGCTTTGGATTCAAAGGTTCTGCCTTTCATCGTGTAATCAGAGATTTCATGATACAAGGGGGTGACTTTGACAAGGGAAATGGAACTGGGGGTAAAAGCATATATGGTCGTACATTTAAAGATGAAAACTTCAAATTGAGTCATACTGGACCAGGAGTTGTCAGCATGGCAAATGCAGGTCCAAATACTAATGGAAGTCAATTTTTCATATGCACTGTCAAGACCCCATGGCTGGATCAGAGGCATGTGGTTTTTGGGCAAGTCCTGGAAGGATTCGACATTGTTAAGCTAATTGAGTCTCAAGAAACAGACCGTGGGGACCGACCATTGAAGAAGGTTGTCATCAGCGACTGTGGCGAGCTTCCAGTGGCCTGA

Protein sequence

PYQRSCSPLLFTFQHKSPSMAASFATTPLVGFVSASNTVSQTKASGPSNSVKLHTLQLPSNLSSSSSFLPASLRFPSLTTSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPVA

Homology

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BLAST of ClCG06G001940 vs. Swiss-Prot
Match: PNSL5_ARATH (Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis thaliana GN=PNSL5 PE=1 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.8e-89
Identity = 166/231 (71.86%), Postives = 191/231 (82.68%), Query Frame = 1


Query: 48  SNSVKLHTLQLPSNLSSSSSFLPASLRFPSLTTSFNPLSSRNAVRSSVRASAEV-PPLQA 107
           S S +L T     ++S SSS  P S     L TS+   + RN    SV+++AEV    Q+
Sbjct: 31  STSFRLRTKSSFDSISFSSS-TPFSASSLLLHTSY---TKRNHRCFSVQSNAEVVTEPQS 90

Query: 108 KVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFGFKGSAFHRVI 167
           K+T+KVYFD+S+GNPVGKLAGRIVIGL+GDDVP+T ENFRALCTGEKGFG+KGS FHRVI
Sbjct: 91  KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 150

Query: 168 RDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTV 227
           RDFMIQGGDF+KGNGTGGKS+YGRTFKDENFKLSH GPGV+SMANAGPNTNGSQFFICT+
Sbjct: 151 RDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTI 210

Query: 228 KTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPVA 278
           KT WLD RHVVFGQV+EG ++VKLIE QETDRGDRP KKVVI+DCG+LP++
Sbjct: 211 KTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQLPMS 257

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BLAST of ClCG06G001940 vs. Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.7e-69
Identity = 129/186 (69.35%), Postives = 147/186 (79.03%), Query Frame = 1


Query: 91  VRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCT 150
           V+S      EV   QAKVTNKVYFDV IG   G++AGRIV+GLFG+ VPKT ENFRALCT
Sbjct: 76  VKSMAAEEEEVIEPQAKVTNKVYFDVEIG---GEVAGRIVMGLFGEVVPKTVENFRALCT 135

Query: 151 GEKGFGFKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMA 210
           GEK +G+KGS+FHR+I+DFMIQGGDF +GNGTGG SIYG  F+DENF L HTGPG++SMA
Sbjct: 136 GEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMA 195

Query: 211 NAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISD 270
           NAGPNTNGSQFFICTVKT WLD +HVVFGQV+EG  +V+ +ESQET   D P K   I  
Sbjct: 196 NAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKKGCRIYA 255

Query: 271 CGELPV 277
           CGELP+
Sbjct: 256 CGELPL 258

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BLAST of ClCG06G001940 vs. Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 4.0e-65
Identity = 131/218 (60.09%), Postives = 156/218 (71.56%), Query Frame = 1


Query: 60  SNLSSSSSFLPASLRFPSLTTSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIG 119
           S LSS+  + P      S  +    ++SR    +S  A  EV  LQAKVT+K++FD+ IG
Sbjct: 35  SKLSSTYHYAPRLS--VSQQSKAKSITSRRITCAS-GAQGEVAELQAKVTSKIFFDIEIG 94

Query: 120 NPVGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKG 179
              G+ AGRIVIGLFGD VPKT ENF+ L TG KG+G++GS FHR+I +FMIQGGDF +G
Sbjct: 95  ---GESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYGYQGSFFHRIIPNFMIQGGDFTEG 154

Query: 180 NGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFG 239
           NGTGG SIYG  F+DE+F L H GPGV+SMANAGPNTNGSQFFICTV TPWLD RHVVFG
Sbjct: 155 NGTGGVSIYGSKFEDESFDLKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFG 214

Query: 240 QVLEGFDIVKLIESQETDRGDR-PLKKVVISDCGELPV 277
            V+EG D+VK +ESQET + D  P K   I+  GELP+
Sbjct: 215 HVIEGLDVVKQLESQETSKLDNSPKKPCKIAKSGELPL 246

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BLAST of ClCG06G001940 vs. Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.5e-64
Identity = 119/171 (69.59%), Postives = 138/171 (80.70%), Query Frame = 1


Query: 107 KVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFGFKGSAFHRVI 166
           KVTNKVYFD+  G+   K  GRIV+GL+G+ VPKT ENFRAL TGEKG+G+K S FHRVI
Sbjct: 27  KVTNKVYFDIKQGD---KDLGRIVLGLYGEVVPKTVENFRALATGEKGYGYKNSKFHRVI 86

Query: 167 RDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTV 226
           +DFMIQGGDF +G+GTGGKSIYG  F DENFKL HTGPG++SMANAG +TNGSQFFI TV
Sbjct: 87  KDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFFITTV 146

Query: 227 KTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPVA 278
            T WLD RHVVFG+V+EG D+V  IE+ +T  GDRP   V+I+DCGELPV+
Sbjct: 147 TTSWLDGRHVVFGKVIEGMDVVTAIETTKTLPGDRPATPVIIADCGELPVS 194

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BLAST of ClCG06G001940 vs. Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 8.3e-63
Identity = 118/170 (69.41%), Postives = 135/170 (79.41%), Query Frame = 1


Query: 107 KVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFGFKGSAFHRVI 166
           KVT KV+FD+ +G    + AGR+VIGLFG  VPKT ENF AL TGEKGFGFKGS FHRVI
Sbjct: 32  KVTAKVFFDLRVGE---EDAGRVVIGLFGKTVPKTVENFVALATGEKGFGFKGSKFHRVI 91

Query: 167 RDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTV 226
           +DFMIQGGDF +G+GTGGKSIYG  F DENFKL H GPG VSMANAG +TNGSQFFI TV
Sbjct: 92  KDFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTV 151

Query: 227 KTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPV 277
           KT WLD +HVVFG+VLEG D+V+ +E+ +TD  D+PLK V I+DCG + V
Sbjct: 152 KTAWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVTIADCGTIEV 198

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BLAST of ClCG06G001940 vs. TrEMBL
Match: A0A0A0KAE0_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_6G093090 PE=3 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 2.1e-121
Identity = 227/258 (87.98%), Postives = 231/258 (89.53%), Query Frame = 1


Query: 20  MAASFATTPLVGFVSASNTVSQTKASGPSNSVKLHTLQLPSNLSSSSSFLPASLRFPSLT 79
           MAAS  TTPLV F S S+T    KASGPSNSVKLH LQ PS    SSSFL  SL FPSLT
Sbjct: 1   MAASLPTTPLVAFASGSDT----KASGPSNSVKLHRLQFPS----SSSFLSGSLHFPSLT 60

Query: 80  TSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 139
           TS NPLSSR  VRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP
Sbjct: 61  TSLNPLSSRIVVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 120

Query: 140 KTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKL 199
           KTAENFRALCTGEKGFGFKGS FHRVI DFMIQGGDF+KGNGTGGKSIYGRTFKDENF L
Sbjct: 121 KTAENFRALCTGEKGFGFKGSVFHRVIEDFMIQGGDFEKGNGTGGKSIYGRTFKDENFNL 180

Query: 200 SHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETDRG 259
           SHTGPG+VSMANAGPNTNGSQFFICTVKT WLD RHVVFGQVLEGF+IVKLIESQETDR 
Sbjct: 181 SHTGPGIVSMANAGPNTNGSQFFICTVKTQWLDLRHVVFGQVLEGFEIVKLIESQETDRA 240

Query: 260 DRPLKKVVISDCGELPVA 278
           DRPLKKVVISDCGELPVA
Sbjct: 241 DRPLKKVVISDCGELPVA 250

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BLAST of ClCG06G001940 vs. TrEMBL
Match: D7U5Y4_VITVI (Peptidyl-prolyl cis-trans isomerase OS=Vitis vinifera GN=VIT_01s0146g00110 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 4.2e-106
Identity = 199/261 (76.25%), Postives = 222/261 (85.06%), Query Frame = 1


Query: 20  MAASFATTPLVGFVSASNTVSQTKASGPS-NSVKLHTLQLPSNLSSSSS--FLPASLRFP 79
           MAAS  T   VG +S+  +V+Q KA GP+ N++KL     PSN+SSSSS  F+  S R  
Sbjct: 1   MAASLTTLSNVGSLSSPRSVAQIKALGPTCNALKLPRSPFPSNVSSSSSSSFVSGSFRLV 60

Query: 80  SLTTSFNPLSSRNA-VRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFG 139
            LT+S NP S R   + SS+RASA+  PLQ+KVT KVYFD+SIGNPVGK+ GRIVIGLFG
Sbjct: 61  PLTSSLNPCSRRRTGLLSSLRASAQEAPLQSKVTQKVYFDISIGNPVGKVVGRIVIGLFG 120

Query: 140 DDVPKTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDE 199
           DDVP+TAENFRALCTGEKGFG+KGS FHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFKDE
Sbjct: 121 DDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDE 180

Query: 200 NFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQE 259
           NFKL+H GPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEG DIVKL+ESQE
Sbjct: 181 NFKLAHVGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVKLVESQE 240

Query: 260 TDRGDRPLKKVVISDCGELPV 277
           TDRGDRP KKVVIS+CGELP+
Sbjct: 241 TDRGDRPRKKVVISECGELPM 261

[Close]

BLAST of ClCG06G001940 vs. TrEMBL
Match: M5XGJ2_PRUPE (Peptidyl-prolyl cis-trans isomerase OS=Prunus persica GN=PRUPE_ppa010146mg PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 6.1e-105
Identity = 203/262 (77.48%), Postives = 220/262 (83.97%), Query Frame = 1


Query: 20  MAASFATTPLVGFVSASNTVSQTKASGPS-NSVKLHTLQLPSNLSS--SSSFLPASLRFP 79
           MAA   T   VG +  S +VSQ +A  P+  SV L T+ L SN  +  SSSFL  S R  
Sbjct: 1   MAAPLTTLSNVGSLPGSRSVSQIRALTPTCTSVTLPTIPLSSNKKATLSSSFLSRSSRLS 60

Query: 80  SLTTSFNPLSSRNA-VRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFG 139
            LT S NP S + A + SSVRASAE   LQ+KVT+KVYFD+SIGNPVGKLAGRIVIGLFG
Sbjct: 61  PLTFSSNPNSQKRASLVSSVRASAEEATLQSKVTHKVYFDISIGNPVGKLAGRIVIGLFG 120

Query: 140 DDVPKTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDE 199
           DDVP+TAENFRALCTG+KGFGFKGSAFHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFKDE
Sbjct: 121 DDVPQTAENFRALCTGDKGFGFKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDE 180

Query: 200 NFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQE 259
           NFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLD RHVVFGQVLEG D+V+LIESQE
Sbjct: 181 NFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGQVLEGLDVVRLIESQE 240

Query: 260 TDRGDRPLKKVVISDCGELPVA 278
           TDRGDRP KKVVI+DCGELPVA
Sbjct: 241 TDRGDRPTKKVVIADCGELPVA 262

[Close]

BLAST of ClCG06G001940 vs. TrEMBL
Match: B9GMP1_POPTR (Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa GN=POPTR_0001s13480g PE=3 SV=2)

HSP 1 Score: 383.6 bits (984), Expect = 2.0e-103
Identity = 205/263 (77.95%), Postives = 223/263 (84.79%), Query Frame = 1


Query: 20  MAASFATTPLVGFV-SASNTVSQTKASGPS--NSVKLHTLQL-PSNLSSSSS--FLPASL 79
           MAASF T P VG + S  NT+S+ K+   +  N+VK  +  L PSN+SSSSS  F   SL
Sbjct: 1   MAASFTTLPNVGSLFSPINTMSRVKSGSSTACNAVKFPSRNLLPSNVSSSSSSLFFSGSL 60

Query: 80  RFPSLTTSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGL 139
           RF S+TTS +P  SR  V SSVRASAEV  LQ+KVTNKVYFD+ IGNPVGKL GRIVIGL
Sbjct: 61  RFASVTTS-SPKKSR--VLSSVRASAEVAELQSKVTNKVYFDIGIGNPVGKLVGRIVIGL 120

Query: 140 FGDDVPKTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFK 199
           FGDDVP+TAENFRALCTGEKGFGFK SAFHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFK
Sbjct: 121 FGDDVPQTAENFRALCTGEKGFGFKNSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFK 180

Query: 200 DENFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIES 259
           DENFKLSH GPGV+SMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEG DIVKLIES
Sbjct: 181 DENFKLSHIGPGVLSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVKLIES 240

Query: 260 QETDRGDRPLKKVVISDCGELPV 277
           QETDRGDRP K+VVI + GELP+
Sbjct: 241 QETDRGDRPTKRVVILESGELPM 260

[Close]

BLAST of ClCG06G001940 vs. TrEMBL
Match: A0A0B0NYE2_GOSAR (Peptidyl-prolyl cis-trans isomerase OS=Gossypium arboreum GN=F383_03482 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 2.2e-102
Identity = 192/260 (73.85%), Postives = 216/260 (83.08%), Query Frame = 1


Query: 20  MAASFATTPLVGFVSASNTVSQTKA-SGPSNSVKL-HTLQLPSNLSSSSSFLPASLRFPS 79
           MA+S  T   VG +S+  T  + +  S  SNS+    TL L   +SSSSS    S RFP 
Sbjct: 1   MASSLTTLSNVGLLSSPRTPPKNQPISTSSNSLNFPRTLSLSPKISSSSSSFSGSFRFPR 60

Query: 80  LTTSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD 139
             +   P ++ + VR SVRA+AEV P+Q+K+TNKV+FD+SIGNPVGKLAG+IVIGL+GDD
Sbjct: 61  FNS---PQTNNHRVRRSVRATAEVAPIQSKITNKVFFDISIGNPVGKLAGKIVIGLYGDD 120

Query: 140 VPKTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 199
           VP+T ENFRALCTGEKGFG+KGSAFHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFKDENF
Sbjct: 121 VPQTTENFRALCTGEKGFGYKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 180

Query: 200 KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETD 259
           KLSH GPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEG D VKLIESQETD
Sbjct: 181 KLSHAGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDTVKLIESQETD 240

Query: 260 RGDRPLKKVVISDCGELPVA 278
           RGDRP KKVVISDCGELP++
Sbjct: 241 RGDRPRKKVVISDCGELPMS 257

[Close]

BLAST of ClCG06G001940 vs. TAIR10
Match: AT5G13120.1 (AT5G13120.1 cyclophilin 20-2)

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-90
Identity = 166/231 (71.86%), Postives = 191/231 (82.68%), Query Frame = 1


Query: 48  SNSVKLHTLQLPSNLSSSSSFLPASLRFPSLTTSFNPLSSRNAVRSSVRASAEV-PPLQA 107
           S S +L T     ++S SSS  P S     L TS+   + RN    SV+++AEV    Q+
Sbjct: 31  STSFRLRTKSSFDSISFSSS-TPFSASSLLLHTSY---TKRNHRCFSVQSNAEVVTEPQS 90

Query: 108 KVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFGFKGSAFHRVI 167
           K+T+KVYFD+S+GNPVGKLAGRIVIGL+GDDVP+T ENFRALCTGEKGFG+KGS FHRVI
Sbjct: 91  KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 150

Query: 168 RDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTV 227
           RDFMIQGGDF+KGNGTGGKS+YGRTFKDENFKLSH GPGV+SMANAGPNTNGSQFFICT+
Sbjct: 151 RDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTI 210

Query: 228 KTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPVA 278
           KT WLD RHVVFGQV+EG ++VKLIE QETDRGDRP KKVVI+DCG+LP++
Sbjct: 211 KTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQLPMS 257

[Close]

BLAST of ClCG06G001940 vs. TAIR10
Match: AT3G62030.2 (AT3G62030.2 rotamase CYP 4)

HSP 1 Score: 265.4 bits (677), Expect = 4.0e-71
Identity = 146/275 (53.09%), Postives = 178/275 (64.73%), Query Frame = 1


Query: 10  LFTFQHKSPSMAASFATTPLVGFVSASNTVSQTKASGPSNSVKLH--TLQLPSNLSSSSS 69
           +F F H       S A++  +  V  S +++Q      S  V  +  T  +     SS  
Sbjct: 47  VFIFNH-------SMASSSSMQMVHTSRSIAQIGFGVKSQLVSANRTTQSVCFGARSSGI 106

Query: 70  FLPASLRFPSLTTSFNPLSSRN------AVRSSVRASAEVPPLQAKVTNKVYFDVSIGNP 129
            L + L + S    F+ + +         V+S      EV   QAKVTNKVYFDV IG  
Sbjct: 107 ALSSRLHYASPIKQFSGVYATTKHQRTACVKSMAAEEEEVIEPQAKVTNKVYFDVEIG-- 166

Query: 130 VGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNG 189
            G++AGRIV+GLFG+ VPKT ENFRALCTGEK +G+KGS+FHR+I+DFMIQGGDF +GNG
Sbjct: 167 -GEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNG 226

Query: 190 TGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 249
           TGG SIYG  F+DENF L HTGPG++SMANAGPNTNGSQFFICTVKT WLD +HVVFGQV
Sbjct: 227 TGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQV 286

Query: 250 LEGFDIVKLIESQETDRGDRPLKKVVISDCGELPV 277
           +EG  +V+ +ESQET   D P K   I  CGELP+
Sbjct: 287 IEGMKLVRTLESQETRAFDVPKKGCRIYACGELPL 311

[Close]

BLAST of ClCG06G001940 vs. TAIR10
Match: AT2G21130.1 (AT2G21130.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 227.6 bits (579), Expect = 9.2e-60
Identity = 114/171 (66.67%), Postives = 132/171 (77.19%), Query Frame = 1


Query: 111 KVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFG-------FKGSAFH 170
           KV+FD++IG   G  AG+IV+ L+ D  PKTAENFRALCTGEKG G       FKGS+FH
Sbjct: 6   KVFFDMTIG---GAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFH 65

Query: 171 RVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFI 230
           RVI +FM QGGDF KGNGTGG+SIYG  F+DENF+  HTGPG++SMANAG NTNGSQFFI
Sbjct: 66  RVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFI 125

Query: 231 CTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGEL 275
           CTVKT WLD +HVVFGQV+EG D+VK IE   +  G +P K VVI+DCGE+
Sbjct: 126 CTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSG-KPTKPVVIADCGEI 172

[Close]

BLAST of ClCG06G001940 vs. TAIR10
Match: AT2G29960.1 (AT2G29960.1 cyclophilin 5)

HSP 1 Score: 227.3 bits (578), Expect = 1.2e-59
Identity = 117/177 (66.10%), Postives = 133/177 (75.14%), Query Frame = 1


Query: 107 KVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFG-------FKG 166
           +VT+KVYFDV I    GK AGR+VIGLFG  VPKTAENFRALCTGEKG G       +KG
Sbjct: 29  EVTHKVYFDVEID---GKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKG 88

Query: 167 SAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGS 226
           S FHR+I  FMIQGGDF  GNG GG+SIYG+ F DENFKL HTGPGV+SMAN+G +TNGS
Sbjct: 89  SKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGS 148

Query: 227 QFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPV 277
           QFFI TV T WLD RHVVFG+V++G D+V  IE++    G  P  KVVI+D GELP+
Sbjct: 149 QFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSG-TPKSKVVIADSGELPL 201

[Close]

BLAST of ClCG06G001940 vs. TAIR10
Match: AT4G38740.1 (AT4G38740.1 rotamase CYP 1)

HSP 1 Score: 223.8 bits (569), Expect = 1.3e-58
Identity = 112/171 (65.50%), Postives = 130/171 (76.02%), Query Frame = 1


Query: 111 KVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFG-------FKGSAFH 170
           KVYFD++I    G+ AGRIV+ L+ D  P+TAENFRALCTGEKG G       FKGS FH
Sbjct: 5   KVYFDMTID---GQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFH 64

Query: 171 RVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFI 230
           RVI +FM QGGDF  GNGTGG+SIYG  F+DENF+  HTGPG++SMANAG NTNGSQFFI
Sbjct: 65  RVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFI 124

Query: 231 CTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGEL 275
           CTVKT WLD +HVVFGQV+EG D+VK IE   +  G +P K VV++DCG+L
Sbjct: 125 CTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSG-KPTKPVVVADCGQL 171

[Close]

BLAST of ClCG06G001940 vs. NCBI nr
Match: gi|659119860|ref|XP_008459881.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic [Cucumis melo])

HSP 1 Score: 447.6 bits (1150), Expect = 1.6e-122
Identity = 229/258 (88.76%), Postives = 235/258 (91.09%), Query Frame = 1


Query: 20  MAASFATTPLVGFVSASNTVSQTKASGPSNSVKLHTLQLPSNLSSSSSFLPASLRFPSLT 79
           MA+S AT PLV F S S+T    KA GPSNSVKLH L+LPS    SSSFL  SL FPSLT
Sbjct: 1   MASSLATRPLVAFASGSHT----KAWGPSNSVKLHMLRLPS----SSSFLSGSLHFPSLT 60

Query: 80  TSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 139
           TS NPLSSR +VRS VRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP
Sbjct: 61  TSLNPLSSRISVRSFVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 120

Query: 140 KTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKL 199
           KTAENFRALCTGEKGFGFKGSAFHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFKDENF L
Sbjct: 121 KTAENFRALCTGEKGFGFKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFNL 180

Query: 200 SHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETDRG 259
           SHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGF+ VKLIESQETDRG
Sbjct: 181 SHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFETVKLIESQETDRG 240

Query: 260 DRPLKKVVISDCGELPVA 278
           DRPLKKVVISDCGELPVA
Sbjct: 241 DRPLKKVVISDCGELPVA 250

[Close]

BLAST of ClCG06G001940 vs. NCBI nr
Match: gi|449445564|ref|XP_004140542.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 5, chloroplastic [Cucumis sativus])

HSP 1 Score: 443.4 bits (1139), Expect = 3.0e-121
Identity = 227/258 (87.98%), Postives = 231/258 (89.53%), Query Frame = 1


Query: 20  MAASFATTPLVGFVSASNTVSQTKASGPSNSVKLHTLQLPSNLSSSSSFLPASLRFPSLT 79
           MAAS  TTPLV F S S+T    KASGPSNSVKLH LQ PS    SSSFL  SL FPSLT
Sbjct: 1   MAASLPTTPLVAFASGSDT----KASGPSNSVKLHRLQFPS----SSSFLSGSLHFPSLT 60

Query: 80  TSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 139
           TS NPLSSR  VRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP
Sbjct: 61  TSLNPLSSRIVVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 120

Query: 140 KTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKL 199
           KTAENFRALCTGEKGFGFKGS FHRVI DFMIQGGDF+KGNGTGGKSIYGRTFKDENF L
Sbjct: 121 KTAENFRALCTGEKGFGFKGSVFHRVIEDFMIQGGDFEKGNGTGGKSIYGRTFKDENFNL 180

Query: 200 SHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETDRG 259
           SHTGPG+VSMANAGPNTNGSQFFICTVKT WLD RHVVFGQVLEGF+IVKLIESQETDR 
Sbjct: 181 SHTGPGIVSMANAGPNTNGSQFFICTVKTQWLDLRHVVFGQVLEGFEIVKLIESQETDRA 240

Query: 260 DRPLKKVVISDCGELPVA 278
           DRPLKKVVISDCGELPVA
Sbjct: 241 DRPLKKVVISDCGELPVA 250

[Close]

BLAST of ClCG06G001940 vs. NCBI nr
Match: gi|359473789|ref|XP_002265030.2| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic [Vitis vinifera])

HSP 1 Score: 392.5 bits (1007), Expect = 6.1e-106
Identity = 199/261 (76.25%), Postives = 222/261 (85.06%), Query Frame = 1


Query: 20  MAASFATTPLVGFVSASNTVSQTKASGPS-NSVKLHTLQLPSNLSSSSS--FLPASLRFP 79
           MAAS  T   VG +S+  +V+Q KA GP+ N++KL     PSN+SSSSS  F+  S R  
Sbjct: 1   MAASLTTLSNVGSLSSPRSVAQIKALGPTCNALKLPRSPFPSNVSSSSSSSFVSGSFRLV 60

Query: 80  SLTTSFNPLSSRNA-VRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFG 139
            LT+S NP S R   + SS+RASA+  PLQ+KVT KVYFD+SIGNPVGK+ GRIVIGLFG
Sbjct: 61  PLTSSLNPCSRRRTGLLSSLRASAQEAPLQSKVTQKVYFDISIGNPVGKVVGRIVIGLFG 120

Query: 140 DDVPKTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDE 199
           DDVP+TAENFRALCTGEKGFG+KGS FHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFKDE
Sbjct: 121 DDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDE 180

Query: 200 NFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQE 259
           NFKL+H GPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEG DIVKL+ESQE
Sbjct: 181 NFKLAHVGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVKLVESQE 240

Query: 260 TDRGDRPLKKVVISDCGELPV 277
           TDRGDRP KKVVIS+CGELP+
Sbjct: 241 TDRGDRPRKKVVISECGELPM 261

[Close]

BLAST of ClCG06G001940 vs. NCBI nr
Match: gi|719983005|ref|XP_010250635.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic [Nelumbo nucifera])

HSP 1 Score: 390.2 bits (1001), Expect = 3.0e-105
Identity = 200/260 (76.92%), Postives = 218/260 (83.85%), Query Frame = 1


Query: 20  MAASFATTPLVGF-VSASNTVSQTKASGPS-NSVKLHTLQLPSNLSSSSSFLPASLRFPS 79
           MA SF +   +G  VS   T+SQ K   PS N+++L     PS++SS S+FL  SL  P 
Sbjct: 1   MATSFPSIANIGTRVSGPRTISQCKVISPSCNTLRLQKCTSPSDISSLSTFLSGSLLCPP 60

Query: 80  LTTSFNPLSSR-NAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGD 139
           L +S  P S R NA  SS RASA+  PLQ+KVTNKVYFD+SIGNPVGKLAGRIVIGLFGD
Sbjct: 61  LRSSSFPSSQRRNAFFSSTRASAQEAPLQSKVTNKVYFDISIGNPVGKLAGRIVIGLFGD 120

Query: 140 DVPKTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDEN 199
           DVP+TAENFRALCTGEKGFG+KGS FHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFKDEN
Sbjct: 121 DVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDEN 180

Query: 200 FKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQET 259
           FKLSH GPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEG D+VKLIESQET
Sbjct: 181 FKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDVVKLIESQET 240

Query: 260 DRGDRPLKKVVISDCGELPV 277
           DRGDRP KKV ISDCGELP+
Sbjct: 241 DRGDRPKKKVAISDCGELPM 260

[Close]

BLAST of ClCG06G001940 vs. NCBI nr
Match: gi|596187298|ref|XP_007223392.1| (hypothetical protein PRUPE_ppa010146mg [Prunus persica])

HSP 1 Score: 388.7 bits (997), Expect = 8.8e-105
Identity = 203/262 (77.48%), Postives = 220/262 (83.97%), Query Frame = 1


Query: 20  MAASFATTPLVGFVSASNTVSQTKASGPS-NSVKLHTLQLPSNLSS--SSSFLPASLRFP 79
           MAA   T   VG +  S +VSQ +A  P+  SV L T+ L SN  +  SSSFL  S R  
Sbjct: 1   MAAPLTTLSNVGSLPGSRSVSQIRALTPTCTSVTLPTIPLSSNKKATLSSSFLSRSSRLS 60

Query: 80  SLTTSFNPLSSRNA-VRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFG 139
            LT S NP S + A + SSVRASAE   LQ+KVT+KVYFD+SIGNPVGKLAGRIVIGLFG
Sbjct: 61  PLTFSSNPNSQKRASLVSSVRASAEEATLQSKVTHKVYFDISIGNPVGKLAGRIVIGLFG 120

Query: 140 DDVPKTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDE 199
           DDVP+TAENFRALCTG+KGFGFKGSAFHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFKDE
Sbjct: 121 DDVPQTAENFRALCTGDKGFGFKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDE 180

Query: 200 NFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQE 259
           NFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLD RHVVFGQVLEG D+V+LIESQE
Sbjct: 181 NFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGQVLEGLDVVRLIESQE 240

Query: 260 TDRGDRPLKKVVISDCGELPVA 278
           TDRGDRP KKVVI+DCGELPVA
Sbjct: 241 TDRGDRPTKKVVIADCGELPVA 262

The following BLAST results are available for this feature:

BLAST of ClCG06G001940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PNSL5_ARATH	1.8e-89	71.86	Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis t...	[more]
CP20C_ARATH	2.7e-69	69.35	Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thalia...	[more]
CYPB_VICFA	4.0e-65	60.09	Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1	[more]
PPIB_ORPSP	1.5e-64	69.59	Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB P...	[more]
PPIB_CHICK	8.3e-63	69.41	Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1	[more]

BLAST of ClCG06G001940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAE0_CUCSA	2.1e-121	87.98	Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_6G093090 PE=3 SV=1	[more]
D7U5Y4_VITVI	4.2e-106	76.25	Peptidyl-prolyl cis-trans isomerase OS=Vitis vinifera GN=VIT_01s0146g00110 PE=3 ...	[more]
M5XGJ2_PRUPE	6.1e-105	77.48	Peptidyl-prolyl cis-trans isomerase OS=Prunus persica GN=PRUPE_ppa010146mg PE=3 ...	[more]
B9GMP1_POPTR	2.0e-103	77.95	Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa GN=POPTR_0001s13480g ...	[more]
A0A0B0NYE2_GOSAR	2.2e-102	73.85	Peptidyl-prolyl cis-trans isomerase OS=Gossypium arboreum GN=F383_03482 PE=3 SV=...	[more]

BLAST of ClCG06G001940 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13120.1	1.0e-90	71.86	cyclophilin 20-2	[more]
AT3G62030.2	4.0e-71	53.09	rotamase CYP 4	[more]
AT2G21130.1	9.2e-60	66.67	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT2G29960.1	1.2e-59	66.10	cyclophilin 5	[more]
AT4G38740.1	1.3e-58	65.50	rotamase CYP 1	[more]

BLAST of ClCG06G001940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119860\|ref\|XP_008459881.1\|	1.6e-122	88.76	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic [Cucumis m...	[more]
gi\|449445564\|ref\|XP_004140542.1\|	3.0e-121	87.98	PREDICTED: photosynthetic NDH subunit of lumenal location 5, chloroplastic [Cucu...	[more]
gi\|359473789\|ref\|XP_002265030.2\|	6.1e-106	76.25	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic [Vitis vin...	[more]
gi\|719983005\|ref\|XP_010250635.1\|	3.0e-105	76.92	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic [Nelumbo n...	[more]
gi\|596187298\|ref\|XP_007223392.1\|	8.8e-105	77.48	hypothetical protein PRUPE_ppa010146mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002130	Cyclophilin-type_PPIase_dom
IPR020892	Cyclophilin-type_PPIase_CS
IPR024936	Cyclophilin-type_PPIase

Vocabulary: **Biological Process**
Term	Definition
GO:0000413	protein peptidyl-prolyl isomerization
GO:0006457	protein folding

Vocabulary: **Molecular Function**
Term	Definition
GO:0003755	peptidyl-prolyl cis-trans isomerase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0010275	NAD(P)H dehydrogenase complex assembly
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
cellular_component	GO:0009533	chloroplast stromal thylakoid
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0043424	protein histidine kinase binding
molecular_function	GO:0016853	isomerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G001940.1	ClCG06G001940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PRINTS	PR00153	CSAPPISMRASE	coord: 162..174 score: 8.0E-39coord: 233..248 score: 8.0E-39coord: 220..232 score: 8.0E-39coord: 133..148 score: 8.0E-39coord: 205..220 score: 8.0
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00160	Pro_isomerase	coord: 126..272 score: 1.3
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PROFILE	PS50072	CSA_PPIASE_2	coord: 123..273 score: 44
IPR020892	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site	PROSITE	PS00170	CSA_PPIASE_1	coord: 157..174 scor
IPR024936	Cyclophilin-type peptidyl-prolyl cis-trans isomerase	PANTHER	PTHR11071	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 44..276 score: 4.5E
None	No IPR available	PANTHER	PTHR11071:SF11	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C	coord: 44..276 score: 4.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG06G001940	Csa6G093090	Cucumber (Chinese Long) v2	cuwcgB476
ClCG06G001940	MELO3C022335	Melon (DHL92) v3.5.1	mewcgB124
ClCG06G001940	Cla001502	Watermelon (97103) v1	wcgwmB345
ClCG06G001940	Cla97C06G111270	Watermelon (97103) v2	wcgwmbB273
ClCG06G001940	Bhi12G002152	Wax gourd	wcgwgoB491
ClCG06G001940	CSPI06G07610	Wild cucumber (PI 183967)	cpiwcgB503
ClCG06G001940	Cucsa.349450	Cucumber (Gy14) v1	cgywcgB595
ClCG06G001940	Lsi09G017470	Bottle gourd (USVL1VR-Ls)	lsiwcgB029
ClCG06G001940	Cp4.1LG01g11790	Cucurbita pepo (Zucchini)	cpewcgB402
ClCG06G001940	MELO3C022335.2	Melon (DHL92) v3.6.1	medwcgB119
ClCG06G001940	Carg11583	Silver-seed gourd	carwcgB0013
ClCG06G001940	CsaV3_6G007990	Cucumber (Chinese Long) v3	cucwcgB497

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG06G001940	Watermelon (Charleston Gray)	wcgwcgB163
ClCG06G001940	Watermelon (Charleston Gray)	wcgwcgB173
ClCG06G001940	Cucurbita maxima (Rimu)	cmawcgB322
ClCG06G001940	Cucurbita maxima (Rimu)	cmawcgB805
ClCG06G001940	Cucurbita moschata (Rifu)	cmowcgB318
ClCG06G001940	Cucurbita moschata (Rifu)	cmowcgB800
ClCG06G001940	Wild cucumber (PI 183967)	cpiwcgB254
ClCG06G001940	Cucumber (Chinese Long) v2	cuwcgB244
ClCG06G001940	Melon (DHL92) v3.5.1	mewcgB444
ClCG06G001940	Cucurbita pepo (Zucchini)	cpewcgB298
ClCG06G001940	Cucurbita pepo (Zucchini)	cpewcgB564
ClCG06G001940	Cucurbita pepo (Zucchini)	cpewcgB789
ClCG06G001940	Cucumber (Gy14) v2	cgybwcgB229
ClCG06G001940	Cucumber (Gy14) v2	cgybwcgB438
ClCG06G001940	Silver-seed gourd	carwcgB0669
ClCG06G001940	Silver-seed gourd	carwcgB0956
ClCG06G001940	Wax gourd	wcgwgoB532