ClCG05G026540 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAATTCTCATCCAGTCGAGTTTGATTTTGAATTCCTTCAAACCAAAACCAACGTACCGTTCTCTTGGGAGGCCAAGCCTGGCGTTCCCAAACCCCAATCGCAACCAAGCCCTAGGGCAAGCTTGTTCGAGGAATCGATCTTGAAATTGCCTTCGCCGCCGTGCCGCTCGGAGAGCGCTAGGCTTTCCGGTAACTACAGTTCGGTGATCCCTTATTCTCCTCCATGTTGCAGCGCGGAGAGTGCGAGGATGGCCAAACATTATTTGTGGCTTGAAGCTTATTCCGACGGCTCTGCGTCGTCTTTCGGTTTCAGGTGCTGTAAATCGGATGATTCGAAGGAGAGGGATCCTTTTGCTGAAGCCTACAAGAAATGTACAGACGGCCCGTCCATGAGCCGTCGGCCGGTTACTGGTGGTTCTGCCACAAATGGTGTTAAACGCCCTAGTATCAAAAGAAGACTTTTTTCGTTATCGCGTAAGTGTTGCGCTTCATTTTTTTCCTTTCTTTTTTTTGAAGCCCAATCTCTACGTGTGTTTGTATTTTGAAAATAAAAATAATTAATTTCGGAATTTCAGTCTTAAAATCTCGTAATAATCTAGTTTTCTGTAATTTAATATAGATATTATTTCTACTACAAAATTATATATTCAAAGTGAGTGTGTTATATTTGACCTTTTAATATTTCGTACACAACTTTATAAATAAACACAGTAAAATGATACTTTGTCTATTATATTTTCTAGAATAAAAAATAATAAACTAAGACCCTCCTTAATACCTATTTCATTTTTCGTGTTTAGATTTTGAAAAGTGTACATATTTTATCACTAATTTTTTATACGAATTTTTTTTTTCTTTCTAAATAAAACATTTTAAATTTTTAGCTTTTTGTTTTTATTTTTCAAGACTTAGTTTGGAGTTTTGAAAACATATATAAGATATAGATGATAAGACAAATAAACTCGAGAGTGAAACTCACAAGTAGTAGTTATAAACTTACTTTTCACGGTACAAAAAAAATACACGATATCAAATGAGATATAAAGATTTATATTTTGAAAATATTTGGATAAAAAAAGTAACTAGAAGCACAATTGTTACATACACATACAATCGTTGCCAAACACATCCTTGACAAAAATGAAAAATGATAGTTGTCAATCTAAATATAATATAACCCAATTAGATCTATGTGCTTCGCTAAAAAATTTTGATATTCAAATCACATGTTACCTACATTTTGTTGCACGCGGCATTCTCTTTTATTGCAAGATAAAGTAAATGTTCAAAGTCCTTAAGTTCCTCTTAGTTAGTAACGAGGCATATTAAATATATGCAGCTAGTCAAATCACAAAATGCCGTAACAATATCGGCTATTTCACATTTATTTGAGTGCCCAAAGTCCGATCTCACTAATAATAAACAAATGAACTAATAAACAACCAAAACTTATCATCCTACTTCTAAAAAATTACATTCAAACATGATTCACGAGAATATAATATATGTATATGTGTATTAATGTACAAATTTAGGTGGTTGACTAATTTTATAATTATCATACAACATGTAACATAGGTTTAAAATCTAGGAAATTTATTTTAAATAGCAATCTGCTTAAAATATTTACAAATAATAGCAAAATATCGTAATCTATCTGCGATAGACTGACTACAATAAACAACTACTATTTGTGTCTATCTCGCGATCTATCGTAGATGGACAGTGAAATTTTGCTATTGTAAATATTTTGGTTCATTTTTTTATATTTGAAAACAACTCTAAAATCTACAATATATATAACTAGTAAATACAGTTGTGTCAAAACCATTAATATATAAATGAGAGACAACGTTTCTATTGGTATAAAGCCTTTTAGTTGATTCCAATAACAAAATTACAATGACTGTTTAATGTCATATATTTATGAACATATGTGACAATTCATTCTTTCTAACTAGTGGCTTCAAAGTCATACACTAAACGTAGTATGCTCATGTGTAATTGTAAGCGAATAACAAAGTGGTATGTTTCAATGACATACTCACAATGATGCTTGTTAAATATGCATTACATAGGTAGTATGGTCTGA ATGGCGAATTCTCATCCAGTCGAGTTTGATTTTGAATTCCTTCAAACCAAAACCAACGTACCGTTCTCTTGGGAGGCCAAGCCTGGCGTTCCCAAACCCCAATCGCAACCAAGCCCTAGGGCAAGCTTGTTCGAGGAATCGATCTTGAAATTGCCTTCGCCGCCGTGCCGCTCGGAGAGCGCTAGGCTTTCCGGTAACTACAGTTCGGTGATCCCTTATTCTCCTCCATGTTGCAGCGCGGAGAGTGCGAGGATGGCCAAACATTATTTGTGGCTTGAAGCTTATTCCGACGGCTCTGCGTCGTCTTTCGGTTTCAGGTGCTGTAAATCGGATGATTCGAAGGAGAGGGATCCTTTTGCTGAAGCCTACAAGAAATGTACAGACGGCCCGTCCATGAGCCGTCGGCCGGTTACTGGTGGTTCTGCCACAAATGGTGTTAAACGCCCTAGTATCAAAAGAAGACTTTTTTCGTTATCGCGTAGTATGGTCTGA ATGGCGAATTCTCATCCAGTCGAGTTTGATTTTGAATTCCTTCAAACCAAAACCAACGTACCGTTCTCTTGGGAGGCCAAGCCTGGCGTTCCCAAACCCCAATCGCAACCAAGCCCTAGGGCAAGCTTGTTCGAGGAATCGATCTTGAAATTGCCTTCGCCGCCGTGCCGCTCGGAGAGCGCTAGGCTTTCCGGTAACTACAGTTCGGTGATCCCTTATTCTCCTCCATGTTGCAGCGCGGAGAGTGCGAGGATGGCCAAACATTATTTGTGGCTTGAAGCTTATTCCGACGGCTCTGCGTCGTCTTTCGGTTTCAGGTGCTGTAAATCGGATGATTCGAAGGAGAGGGATCCTTTTGCTGAAGCCTACAAGAAATGTACAGACGGCCCGTCCATGAGCCGTCGGCCGGTTACTGGTGGTTCTGCCACAAATGGTGTTAAACGCCCTAGTATCAAAAGAAGACTTTTTTCGTTATCGCGTAGTATGGTCTGA MANSHPVEFDFEFLQTKTNVPFSWEAKPGVPKPQSQPSPRASLFEESILKLPSPPCRSESARLSGNYSSVIPYSPPCCSAESARMAKHYLWLEAYSDGSASSFGFRCCKSDDSKERDPFAEAYKKCTDGPSMSRRPVTGGSATNGVKRPSIKRRLFSLSRSMV
BLAST of ClCG05G026540 vs. TrEMBL
Match: A0A0A0KZZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G644720 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 8.4e-62 Identity = 124/163 (76.07%), Postives = 135/163 (82.82%), Query Frame = 1
BLAST of ClCG05G026540 vs. TrEMBL
Match: B9R6W1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1586460 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.8e-08 Identity = 49/139 (35.25%), Postives = 67/139 (48.20%), Query Frame = 1
BLAST of ClCG05G026540 vs. TrEMBL
Match: A0A067LAQ4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15992 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 9.1e-08 Identity = 48/144 (33.33%), Postives = 64/144 (44.44%), Query Frame = 1
BLAST of ClCG05G026540 vs. TrEMBL
Match: B9IBN6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s01330g PE=4 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 2.3e-06 Identity = 47/145 (32.41%), Postives = 64/145 (44.14%), Query Frame = 1
BLAST of ClCG05G026540 vs. TrEMBL
Match: A0A061FEE8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_034658 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 6.6e-06 Identity = 48/135 (35.56%), Postives = 63/135 (46.67%), Query Frame = 1
BLAST of ClCG05G026540 vs. NCBI nr
Match: gi|700200137|gb|KGN55295.1| (hypothetical protein Csa_4G644720 [Cucumis sativus]) HSP 1 Score: 244.6 bits (623), Expect = 1.2e-61 Identity = 124/163 (76.07%), Postives = 135/163 (82.82%), Query Frame = 1
BLAST of ClCG05G026540 vs. NCBI nr
Match: gi|449447081|ref|XP_004141298.1| (PREDICTED: uncharacterized protein LOC101203728 [Cucumis sativus]) HSP 1 Score: 244.6 bits (623), Expect = 1.2e-61 Identity = 124/163 (76.07%), Postives = 135/163 (82.82%), Query Frame = 1
BLAST of ClCG05G026540 vs. NCBI nr
Match: gi|223550755|gb|EEF52241.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 67.4 bits (163), Expect = 2.6e-08 Identity = 49/139 (35.25%), Postives = 67/139 (48.20%), Query Frame = 1
BLAST of ClCG05G026540 vs. NCBI nr
Match: gi|1000986272|ref|XP_015574398.1| (PREDICTED: uncharacterized protein LOC8265256 [Ricinus communis]) HSP 1 Score: 67.0 bits (162), Expect = 3.5e-08 Identity = 48/133 (36.09%), Postives = 65/133 (48.87%), Query Frame = 1
BLAST of ClCG05G026540 vs. NCBI nr
Match: gi|643734915|gb|KDP41585.1| (hypothetical protein JCGZ_15992 [Jatropha curcas]) HSP 1 Score: 65.1 bits (157), Expect = 1.3e-07 Identity = 48/144 (33.33%), Postives = 64/144 (44.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|