ClCG05G026540 (gene) Watermelon (Charleston Gray)

NameClCG05G026540
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr05 : 37781741 .. 37783836 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAATTCTCATCCAGTCGAGTTTGATTTTGAATTCCTTCAAACCAAAACCAACGTACCGTTCTCTTGGGAGGCCAAGCCTGGCGTTCCCAAACCCCAATCGCAACCAAGCCCTAGGGCAAGCTTGTTCGAGGAATCGATCTTGAAATTGCCTTCGCCGCCGTGCCGCTCGGAGAGCGCTAGGCTTTCCGGTAACTACAGTTCGGTGATCCCTTATTCTCCTCCATGTTGCAGCGCGGAGAGTGCGAGGATGGCCAAACATTATTTGTGGCTTGAAGCTTATTCCGACGGCTCTGCGTCGTCTTTCGGTTTCAGGTGCTGTAAATCGGATGATTCGAAGGAGAGGGATCCTTTTGCTGAAGCCTACAAGAAATGTACAGACGGCCCGTCCATGAGCCGTCGGCCGGTTACTGGTGGTTCTGCCACAAATGGTGTTAAACGCCCTAGTATCAAAAGAAGACTTTTTTCGTTATCGCGTAAGTGTTGCGCTTCATTTTTTTCCTTTCTTTTTTTTGAAGCCCAATCTCTACGTGTGTTTGTATTTTGAAAATAAAAATAATTAATTTCGGAATTTCAGTCTTAAAATCTCGTAATAATCTAGTTTTCTGTAATTTAATATAGATATTATTTCTACTACAAAATTATATATTCAAAGTGAGTGTGTTATATTTGACCTTTTAATATTTCGTACACAACTTTATAAATAAACACAGTAAAATGATACTTTGTCTATTATATTTTCTAGAATAAAAAATAATAAACTAAGACCCTCCTTAATACCTATTTCATTTTTCGTGTTTAGATTTTGAAAAGTGTACATATTTTATCACTAATTTTTTATACGAATTTTTTTTTTCTTTCTAAATAAAACATTTTAAATTTTTAGCTTTTTGTTTTTATTTTTCAAGACTTAGTTTGGAGTTTTGAAAACATATATAAGATATAGATGATAAGACAAATAAACTCGAGAGTGAAACTCACAAGTAGTAGTTATAAACTTACTTTTCACGGTACAAAAAAAATACACGATATCAAATGAGATATAAAGATTTATATTTTGAAAATATTTGGATAAAAAAAGTAACTAGAAGCACAATTGTTACATACACATACAATCGTTGCCAAACACATCCTTGACAAAAATGAAAAATGATAGTTGTCAATCTAAATATAATATAACCCAATTAGATCTATGTGCTTCGCTAAAAAATTTTGATATTCAAATCACATGTTACCTACATTTTGTTGCACGCGGCATTCTCTTTTATTGCAAGATAAAGTAAATGTTCAAAGTCCTTAAGTTCCTCTTAGTTAGTAACGAGGCATATTAAATATATGCAGCTAGTCAAATCACAAAATGCCGTAACAATATCGGCTATTTCACATTTATTTGAGTGCCCAAAGTCCGATCTCACTAATAATAAACAAATGAACTAATAAACAACCAAAACTTATCATCCTACTTCTAAAAAATTACATTCAAACATGATTCACGAGAATATAATATATGTATATGTGTATTAATGTACAAATTTAGGTGGTTGACTAATTTTATAATTATCATACAACATGTAACATAGGTTTAAAATCTAGGAAATTTATTTTAAATAGCAATCTGCTTAAAATATTTACAAATAATAGCAAAATATCGTAATCTATCTGCGATAGACTGACTACAATAAACAACTACTATTTGTGTCTATCTCGCGATCTATCGTAGATGGACAGTGAAATTTTGCTATTGTAAATATTTTGGTTCATTTTTTTATATTTGAAAACAACTCTAAAATCTACAATATATATAACTAGTAAATACAGTTGTGTCAAAACCATTAATATATAAATGAGAGACAACGTTTCTATTGGTATAAAGCCTTTTAGTTGATTCCAATAACAAAATTACAATGACTGTTTAATGTCATATATTTATGAACATATGTGACAATTCATTCTTTCTAACTAGTGGCTTCAAAGTCATACACTAAACGTAGTATGCTCATGTGTAATTGTAAGCGAATAACAAAGTGGTATGTTTCAATGACATACTCACAATGATGCTTGTTAAATATGCATTACATAGGTAGTATGGTCTGA

mRNA sequence

ATGGCGAATTCTCATCCAGTCGAGTTTGATTTTGAATTCCTTCAAACCAAAACCAACGTACCGTTCTCTTGGGAGGCCAAGCCTGGCGTTCCCAAACCCCAATCGCAACCAAGCCCTAGGGCAAGCTTGTTCGAGGAATCGATCTTGAAATTGCCTTCGCCGCCGTGCCGCTCGGAGAGCGCTAGGCTTTCCGGTAACTACAGTTCGGTGATCCCTTATTCTCCTCCATGTTGCAGCGCGGAGAGTGCGAGGATGGCCAAACATTATTTGTGGCTTGAAGCTTATTCCGACGGCTCTGCGTCGTCTTTCGGTTTCAGGTGCTGTAAATCGGATGATTCGAAGGAGAGGGATCCTTTTGCTGAAGCCTACAAGAAATGTACAGACGGCCCGTCCATGAGCCGTCGGCCGGTTACTGGTGGTTCTGCCACAAATGGTGTTAAACGCCCTAGTATCAAAAGAAGACTTTTTTCGTTATCGCGTAGTATGGTCTGA

Coding sequence (CDS)

ATGGCGAATTCTCATCCAGTCGAGTTTGATTTTGAATTCCTTCAAACCAAAACCAACGTACCGTTCTCTTGGGAGGCCAAGCCTGGCGTTCCCAAACCCCAATCGCAACCAAGCCCTAGGGCAAGCTTGTTCGAGGAATCGATCTTGAAATTGCCTTCGCCGCCGTGCCGCTCGGAGAGCGCTAGGCTTTCCGGTAACTACAGTTCGGTGATCCCTTATTCTCCTCCATGTTGCAGCGCGGAGAGTGCGAGGATGGCCAAACATTATTTGTGGCTTGAAGCTTATTCCGACGGCTCTGCGTCGTCTTTCGGTTTCAGGTGCTGTAAATCGGATGATTCGAAGGAGAGGGATCCTTTTGCTGAAGCCTACAAGAAATGTACAGACGGCCCGTCCATGAGCCGTCGGCCGGTTACTGGTGGTTCTGCCACAAATGGTGTTAAACGCCCTAGTATCAAAAGAAGACTTTTTTCGTTATCGCGTAGTATGGTCTGA

Protein sequence

MANSHPVEFDFEFLQTKTNVPFSWEAKPGVPKPQSQPSPRASLFEESILKLPSPPCRSESARLSGNYSSVIPYSPPCCSAESARMAKHYLWLEAYSDGSASSFGFRCCKSDDSKERDPFAEAYKKCTDGPSMSRRPVTGGSATNGVKRPSIKRRLFSLSRSMV
BLAST of ClCG05G026540 vs. TrEMBL
Match: A0A0A0KZZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G644720 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 8.4e-62
Identity = 124/163 (76.07%), Postives = 135/163 (82.82%), Query Frame = 1

Query: 1   MANSHPVEFDFEFLQTKTNVPFSWEAKPGVPKPQSQPSPRASLFE--ESILKLPSPPCRS 60
           MA+S P+E DFEFL TKTNVPFSWEAKPGVPKPQSQPSP ASLFE   ++LKLPSPPCRS
Sbjct: 1   MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRS 60

Query: 61  ESARLSGNYSSVIPYSPPCCSAESARMAKHYLWLEAYSDGSASSFGFRCCKSDDSKERDP 120
           ESARLSG+YS +I YSPP C AESARMAK +LWLEAYSDGSASSFGF CCKSDDSK+ DP
Sbjct: 61  ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP 120

Query: 121 FAEAYKKCTDGPSMSRRPVTGGSATNGVKRPSIKRR-LFSLSR 161
           F EAYKKC +      R + G SATNG KRP+I RR LFSLSR
Sbjct: 121 FVEAYKKCRNS-----RSINGASATNGAKRPNIIRRVLFSLSR 158

BLAST of ClCG05G026540 vs. TrEMBL
Match: B9R6W1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1586460 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.8e-08
Identity = 49/139 (35.25%), Postives = 67/139 (48.20%), Query Frame = 1

Query: 16  TKTNVPFSWEAKPGVPKPQSQPSPRASLFEESILKLPSPPCRSESARLSGNYSSVIPYSP 75
           TK NVPFSWE KPGV K  +Q S   +  E+ +LKL  PPC  ES R+S + +  IP  P
Sbjct: 8   TKGNVPFSWEKKPGVSKLINQDSD-PNQEEDLVLKLLPPPCPIESPRISTHDTINIPL-P 67

Query: 76  PCCSAESARMAKHYLWLEAYSDGSASSFGFRCCKSDDSKERDPFAEAYKKCTDGPSMSRR 135
           PC     +R              S+S  G R       K+ DPF  AYK+CT       +
Sbjct: 68  PCTFQPPSR--------------SSSRKGIR-------KQDDPFLAAYKECTKSTEKGDK 123

Query: 136 PVTGGSATNGVKRPSIKRR 155
                +A +G+++    +R
Sbjct: 128 LSRNNAARSGLRKGQEMKR 123

BLAST of ClCG05G026540 vs. TrEMBL
Match: A0A067LAQ4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15992 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 9.1e-08
Identity = 48/144 (33.33%), Postives = 64/144 (44.44%), Query Frame = 1

Query: 16  TKTNVPFSWEAKPGVPKPQSQPSPRASLFEESILKLPSPPCRSESARLSGNYSSVIPYSP 75
           +K NVPFSWE KPGV K  +  +      ++ ++KLP PPC  ES      +   IP  P
Sbjct: 9   SKGNVPFSWEKKPGVSKVNAMINNNQEQ-DQIVVKLPPPPCPIES-PRVSAHEISIPL-P 68

Query: 76  PCCSAESARMAKHYLWLEAYSDGSASSFGFRCCKSDDSKERDPFAEAYKKCTDGPSMSRR 135
           PC     +R                         S   K  DPF  AYK+CT   + S+ 
Sbjct: 69  PCTFQPPSR-------------------------SSSRKWDDPFLAAYKECTKSSTRSKA 122

Query: 136 PVTGGSATNGVKRPSIKRRLFSLS 160
            V GGSA  G  R  +++ +F LS
Sbjct: 129 KVAGGSA--GFSRSGLRKGMFKLS 122

BLAST of ClCG05G026540 vs. TrEMBL
Match: B9IBN6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s01330g PE=4 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 2.3e-06
Identity = 47/145 (32.41%), Postives = 64/145 (44.14%), Query Frame = 1

Query: 14  LQTKTNVPFSWEAKPGVPKPQSQPSPRASLFEESILKL----PSPPCRSESARLSGNYSS 73
           +Q+K NVPFSWE KPGV K   Q      ++    LKL    P PPC S+S +   +YS 
Sbjct: 7   VQSKVNVPFSWEQKPGVSKVTRQEVRPEDIWHFR-LKLPPPPPPPPCASKSTKFPSDYSL 66

Query: 74  VIPYSPPCCSAESARMAKHYLWLEAYSDGSASSFGFRCCKSDDSKERDPFAEAYKKCTDG 133
            +P +P                        +SSF     K     + DPF  AYKKC   
Sbjct: 67  QVPSTP------------------------SSSF-----KKGTRIQEDPFLRAYKKCIGS 118

Query: 134 PSMSRRPVTGGSATNGVKRPSIKRR 155
           P ++ +  + G   +G  RP I R+
Sbjct: 127 P-INGKLTSDGKTDHG--RPKIVRK 118

BLAST of ClCG05G026540 vs. TrEMBL
Match: A0A061FEE8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_034658 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.6e-06
Identity = 48/135 (35.56%), Postives = 63/135 (46.67%), Query Frame = 1

Query: 14  LQTKTNVPFSWEAKPGVPKPQSQPSPRASLFEESILKLPSPPCRSESARLSGNYSSVIPY 73
           + ++ NVPFSWE KPGV K  SQ       F   + KLPSPP   ESAR+S +   + P 
Sbjct: 6   VHSQGNVPFSWENKPGVCKLTSQEGSEEYYF---LQKLPSPPYPPESARISIHDIKIPP- 65

Query: 74  SPPCCSAESARMAKHYLWLEAYSDGSASSFGFRCCKSDDSKERDPFAEAYKKCTDGPSMS 133
            PPC      +              ++S  G R  KSD     DPF  AYK+CT   S  
Sbjct: 66  -PPCAFQHPFK--------------TSSRRGLR--KSD-----DPFLAAYKECTKNTSKG 112

Query: 134 RRPVTGGSATNGVKR 149
           +     G   +G+K+
Sbjct: 126 KLAKRDGG--SGLKK 112

BLAST of ClCG05G026540 vs. NCBI nr
Match: gi|700200137|gb|KGN55295.1| (hypothetical protein Csa_4G644720 [Cucumis sativus])

HSP 1 Score: 244.6 bits (623), Expect = 1.2e-61
Identity = 124/163 (76.07%), Postives = 135/163 (82.82%), Query Frame = 1

Query: 1   MANSHPVEFDFEFLQTKTNVPFSWEAKPGVPKPQSQPSPRASLFE--ESILKLPSPPCRS 60
           MA+S P+E DFEFL TKTNVPFSWEAKPGVPKPQSQPSP ASLFE   ++LKLPSPPCRS
Sbjct: 1   MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRS 60

Query: 61  ESARLSGNYSSVIPYSPPCCSAESARMAKHYLWLEAYSDGSASSFGFRCCKSDDSKERDP 120
           ESARLSG+YS +I YSPP C AESARMAK +LWLEAYSDGSASSFGF CCKSDDSK+ DP
Sbjct: 61  ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP 120

Query: 121 FAEAYKKCTDGPSMSRRPVTGGSATNGVKRPSIKRR-LFSLSR 161
           F EAYKKC +      R + G SATNG KRP+I RR LFSLSR
Sbjct: 121 FVEAYKKCRNS-----RSINGASATNGAKRPNIIRRVLFSLSR 158

BLAST of ClCG05G026540 vs. NCBI nr
Match: gi|449447081|ref|XP_004141298.1| (PREDICTED: uncharacterized protein LOC101203728 [Cucumis sativus])

HSP 1 Score: 244.6 bits (623), Expect = 1.2e-61
Identity = 124/163 (76.07%), Postives = 135/163 (82.82%), Query Frame = 1

Query: 1   MANSHPVEFDFEFLQTKTNVPFSWEAKPGVPKPQSQPSPRASLFE--ESILKLPSPPCRS 60
           MA+S P+E DFEFL TKTNVPFSWEAKPGVPKPQSQPSP ASLFE   ++LKLPSPPCRS
Sbjct: 1   MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRS 60

Query: 61  ESARLSGNYSSVIPYSPPCCSAESARMAKHYLWLEAYSDGSASSFGFRCCKSDDSKERDP 120
           ESARLSG+YS +I YSPP C AESARMAK +LWLEAYSDGSASSFGF CCKSDDSK+ DP
Sbjct: 61  ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP 120

Query: 121 FAEAYKKCTDGPSMSRRPVTGGSATNGVKRPSIKRR-LFSLSR 161
           F EAYKKC +      R + G SATNG KRP+I RR LFSLSR
Sbjct: 121 FVEAYKKCRNS-----RSINGASATNGAKRPNIIRRVLFSLSR 158

BLAST of ClCG05G026540 vs. NCBI nr
Match: gi|223550755|gb|EEF52241.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 67.4 bits (163), Expect = 2.6e-08
Identity = 49/139 (35.25%), Postives = 67/139 (48.20%), Query Frame = 1

Query: 16  TKTNVPFSWEAKPGVPKPQSQPSPRASLFEESILKLPSPPCRSESARLSGNYSSVIPYSP 75
           TK NVPFSWE KPGV K  +Q S   +  E+ +LKL  PPC  ES R+S + +  IP  P
Sbjct: 8   TKGNVPFSWEKKPGVSKLINQDSD-PNQEEDLVLKLLPPPCPIESPRISTHDTINIPL-P 67

Query: 76  PCCSAESARMAKHYLWLEAYSDGSASSFGFRCCKSDDSKERDPFAEAYKKCTDGPSMSRR 135
           PC     +R              S+S  G R       K+ DPF  AYK+CT       +
Sbjct: 68  PCTFQPPSR--------------SSSRKGIR-------KQDDPFLAAYKECTKSTEKGDK 123

Query: 136 PVTGGSATNGVKRPSIKRR 155
                +A +G+++    +R
Sbjct: 128 LSRNNAARSGLRKGQEMKR 123

BLAST of ClCG05G026540 vs. NCBI nr
Match: gi|1000986272|ref|XP_015574398.1| (PREDICTED: uncharacterized protein LOC8265256 [Ricinus communis])

HSP 1 Score: 67.0 bits (162), Expect = 3.5e-08
Identity = 48/133 (36.09%), Postives = 65/133 (48.87%), Query Frame = 1

Query: 16  TKTNVPFSWEAKPGVPKPQSQPSPRASLFEESILKLPSPPCRSESARLSGNYSSVIPYSP 75
           TK NVPFSWE KPGV K  +Q S   +  E+ +LKL  PPC  ES R+S + +  IP  P
Sbjct: 8   TKGNVPFSWEKKPGVSKLINQDSD-PNQEEDLVLKLLPPPCPIESPRISTHDTINIPL-P 67

Query: 76  PCCSAESARMAKHYLWLEAYSDGSASSFGFRCCKSDDSKERDPFAEAYKKCTDGPSMSRR 135
           PC     +R              S+S  G R       K+ DPF  AYK+CT       +
Sbjct: 68  PCTFQPPSR--------------SSSRKGIR-------KQDDPFLAAYKECTKSTEKGDK 117

Query: 136 PVTGGSATNGVKR 149
                +A +G+++
Sbjct: 128 LSRNNAARSGLRK 117

BLAST of ClCG05G026540 vs. NCBI nr
Match: gi|643734915|gb|KDP41585.1| (hypothetical protein JCGZ_15992 [Jatropha curcas])

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-07
Identity = 48/144 (33.33%), Postives = 64/144 (44.44%), Query Frame = 1

Query: 16  TKTNVPFSWEAKPGVPKPQSQPSPRASLFEESILKLPSPPCRSESARLSGNYSSVIPYSP 75
           +K NVPFSWE KPGV K  +  +      ++ ++KLP PPC  ES      +   IP  P
Sbjct: 9   SKGNVPFSWEKKPGVSKVNAMINNNQEQ-DQIVVKLPPPPCPIES-PRVSAHEISIPL-P 68

Query: 76  PCCSAESARMAKHYLWLEAYSDGSASSFGFRCCKSDDSKERDPFAEAYKKCTDGPSMSRR 135
           PC     +R                         S   K  DPF  AYK+CT   + S+ 
Sbjct: 69  PCTFQPPSR-------------------------SSSRKWDDPFLAAYKECTKSSTRSKA 122

Query: 136 PVTGGSATNGVKRPSIKRRLFSLS 160
            V GGSA  G  R  +++ +F LS
Sbjct: 129 KVAGGSA--GFSRSGLRKGMFKLS 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KZZ9_CUCSA8.4e-6276.07Uncharacterized protein OS=Cucumis sativus GN=Csa_4G644720 PE=4 SV=1[more]
B9R6W1_RICCO1.8e-0835.25Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1586460 PE=4 SV=1[more]
A0A067LAQ4_JATCU9.1e-0833.33Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15992 PE=4 SV=1[more]
B9IBN6_POPTR2.3e-0632.41Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s01330g PE=4 SV=2[more]
A0A061FEE8_THECC6.6e-0635.56Uncharacterized protein OS=Theobroma cacao GN=TCM_034658 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700200137|gb|KGN55295.1|1.2e-6176.07hypothetical protein Csa_4G644720 [Cucumis sativus][more]
gi|449447081|ref|XP_004141298.1|1.2e-6176.07PREDICTED: uncharacterized protein LOC101203728 [Cucumis sativus][more]
gi|223550755|gb|EEF52241.1|2.6e-0835.25conserved hypothetical protein [Ricinus communis][more]
gi|1000986272|ref|XP_015574398.1|3.5e-0836.09PREDICTED: uncharacterized protein LOC8265256 [Ricinus communis][more]
gi|643734915|gb|KDP41585.1|1.3e-0733.33hypothetical protein JCGZ_15992 [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007789DUF688
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G026540.1ClCG05G026540.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007789Protein of unknown function DUF688PFAMPF05097DUF688coord: 18..114
score: 1.