ClCG05G023910 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G023910
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Plastid division regulator MinE
Location	CG_Chr05 : 35642127 .. 35643612 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACAACGTCGTGGTTTCAGGTCCGAGTACGACGACCGTTGTTCAGCGCCAGACCCTGATAGAAGGGTCCCCAGTTTCCTCGGGTAAGGAGGTGAAGAGAGTGAAAGCGCGGGAGAACCATTCGAATTCAAGGTTAAAGAAAACCAAACTCGAAAATGGCGATTCCTGGAGATCCAATGGCTTTTCCAACACTAGCTTCTTCTTATCCACGGCGTTCTCCGACGTCATTTCATCCTCTCAAGGTCTGAAAATCAGTTTTCCTCGAGTTCCACTTCTCTATTACTGAACTTCCTTATCTTCATTTTCATCCGAGTCTGTTGCCATTCGTCAAATGCATCTCCATTTCTCCAACAATTGCATGGAATTGACATAGATTTGTGGAATACTTTCTGGAATCTGATTTTGTGGTTAGCCTTTCCATCATTTTTTACTCCTTTAATCGCTTCTCCAGATCTTTAGTAGTTTTATTTGTCGATTTGAAGTCACCAATTCTTGACGCTTTGGCTCCAGGTTTCCCTGATTATCAGGCTTGAATTTCAATAGTTGAAATCGCTTGGACTCTATTTCTTGATAGTTGCAACATCCATGCTACTACTGGTTTGGTTTCTCCCAAGTTGCGTCGTTGGTGTGCCTATAAATTTTTCTCATAGTACTCGAGTAGAAGGTGCTATGCTTCTTATGCGATGTTTATAGATGTTGTTAGGCCTAAAACCTGGCGTAATTCATTTTTGGTTCTGGAGAGAATCCAACACTTTTGCTCAAATTTTACTGAATCTTCTGTATAGCGATTGATATGGAGAAAATTTAGAATGCAGGAGGAACCTTCTCGAAAACTTGCAAAACGGCTTTGTTTAATTTGAGATTCTTGTATTGCACTGCAGGTGGACCTCTCTAGTTCTGTTTATAGACGATTTGGAAGTAAAGGAATAAAGCCAAAAAGGCATACCATGGCACATGAAAATGATAGCATACACAGTATCTCCCTGGAAGATGTTGAGAGCTCAGCAAATTATGAACGATCACCAAAATCCTTAAGTCAAGAGAGCTTCATCCTCAGTTCCATGAACATGAACTTTTTGGAACGATTAATATTGGCTTGGAGGATAATTTTTCCACCAACATCAACTCCTAAATTGAACTCTAATGCTATGATAGCCAAGCAGCGGTTGAAGATGATTCTCTTGTCCGATCGATGTGCAGTGAATGACGAAGCTAAACAAAAGATTGTGGACAACATCTTGAGTACTCTTTCAGATTTTGTAGAAATAGATTCAGAAGATAAAGTTCAATTTAATGTCTCTACTGATTTAGATCTCAGAACAATTTACTCTGTAACGGTGCCTGTGCGAAGGGTGAAGGCTGAATATCAAGGCAGTGAGGAGGTTGAAGCAACCACGAATACAGACTTGAAAGATGATGGAGAAGGATCTGCCTCCGCAGGTCTCATTTTCGATTCGTTAATTGCAGATGGAAAAGGTTCTTAA

mRNA sequence

ATGCACAACGTCGTGGTTTCAGGTCCGAGTACGACGACCGTTGTTCAGCGCCAGACCCTGATAGAAGGGTCCCCAGTTTCCTCGGGTAAGGAGGTGAAGAGAGTGAAAGCGCGGGAGAACCATTCGAATTCAAGGTTAAAGAAAACCAAACTCGAAAATGGCGATTCCTGGAGATCCAATGGCTTTTCCAACACTAGCTTCTTCTTATCCACGGCGTTCTCCGACGTCATTTCATCCTCTCAAGGTCTGAAAATCAGTTTTCCTCGAGTGGACCTCTCTAGTTCTGTTTATAGACGATTTGGAAGTAAAGGAATAAAGCCAAAAAGGCATACCATGGCACATGAAAATGATAGCATACACAGTATCTCCCTGGAAGATGTTGAGAGCTCAGCAAATTATGAACGATCACCAAAATCCTTAAGTCAAGAGAGCTTCATCCTCAGTTCCATGAACATGAACTTTTTGGAACGATTAATATTGGCTTGGAGGATAATTTTTCCACCAACATCAACTCCTAAATTGAACTCTAATGCTATGATAGCCAAGCAGCGGTTGAAGATGATTCTCTTGTCCGATCGATGTGCAGTGAATGACGAAGCTAAACAAAAGATTGTGGACAACATCTTGAGTACTCTTTCAGATTTTGTAGAAATAGATTCAGAAGATAAAGTTCAATTTAATGTCTCTACTGATTTAGATCTCAGAACAATTTACTCTGTAACGGTGCCTGTGCGAAGGGTGAAGGCTGAATATCAAGGCAGTGAGGAGGTTGAAGCAACCACGAATACAGACTTGAAAGATGATGGAGAAGGATCTGCCTCCGCAGGTCTCATTTTCGATTCGTTAATTGCAGATGGAAAAGGTTCTTAA

Coding sequence (CDS)

ATGCACAACGTCGTGGTTTCAGGTCCGAGTACGACGACCGTTGTTCAGCGCCAGACCCTGATAGAAGGGTCCCCAGTTTCCTCGGGTAAGGAGGTGAAGAGAGTGAAAGCGCGGGAGAACCATTCGAATTCAAGGTTAAAGAAAACCAAACTCGAAAATGGCGATTCCTGGAGATCCAATGGCTTTTCCAACACTAGCTTCTTCTTATCCACGGCGTTCTCCGACGTCATTTCATCCTCTCAAGGTCTGAAAATCAGTTTTCCTCGAGTGGACCTCTCTAGTTCTGTTTATAGACGATTTGGAAGTAAAGGAATAAAGCCAAAAAGGCATACCATGGCACATGAAAATGATAGCATACACAGTATCTCCCTGGAAGATGTTGAGAGCTCAGCAAATTATGAACGATCACCAAAATCCTTAAGTCAAGAGAGCTTCATCCTCAGTTCCATGAACATGAACTTTTTGGAACGATTAATATTGGCTTGGAGGATAATTTTTCCACCAACATCAACTCCTAAATTGAACTCTAATGCTATGATAGCCAAGCAGCGGTTGAAGATGATTCTCTTGTCCGATCGATGTGCAGTGAATGACGAAGCTAAACAAAAGATTGTGGACAACATCTTGAGTACTCTTTCAGATTTTGTAGAAATAGATTCAGAAGATAAAGTTCAATTTAATGTCTCTACTGATTTAGATCTCAGAACAATTTACTCTGTAACGGTGCCTGTGCGAAGGGTGAAGGCTGAATATCAAGGCAGTGAGGAGGTTGAAGCAACCACGAATACAGACTTGAAAGATGATGGAGAAGGATCTGCCTCCGCAGGTCTCATTTTCGATTCGTTAATTGCAGATGGAAAAGGTTCTTAA

Protein sequence

MHNVVVSGPSTTTVVQRQTLIEGSPVSSGKEVKRVKARENHSNSRLKKTKLENGDSWRSNGFSNTSFFLSTAFSDVISSSQGLKISFPRVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKGS

Homology

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BLAST of ClCG05G023910 vs. Swiss-Prot
Match: MINE1_ARATH (Cell division topological specificity factor homolog, chloroplastic OS=Arabidopsis thaliana GN=MINE1 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.6e-40
Identity = 90/153 (58.82%), Postives = 110/153 (71.90%), Query Frame = 1


Query: 129 SSANYERSPKSLSQE--SFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLK 188
           ++ +YE SP    QE  SF+ +++NM F +RL LAW+IIFP  ++ + +SNA IAKQRLK
Sbjct: 74  NTGDYELSPSPAEQEIESFLYNAINMGFFDRLNLAWKIIFPSHASRR-SSNARIAKQRLK 133

Query: 189 MILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRR 248
           MIL SDRC V+DEAK+KIV+NI+  LSDFVEI+SE+KVQ NVSTD DL TIYSVTVPVRR
Sbjct: 134 MILFSDRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQLNVSTDGDLGTIYSVTVPVRR 193

Query: 249 VKAEYQGSEEVEATTNTDLKDDGEGSASAGLIF 280
           VK EYQ  +E    TN + KD  +GS      F
Sbjct: 194 VKPEYQDVDEAGTITNVEYKDTRDGSVDVRFDF 225

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BLAST of ClCG05G023910 vs. TrEMBL
Match: A0A0A0KQS2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606490 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.7e-87
Identity = 171/201 (85.07%), Postives = 184/201 (91.54%), Query Frame = 1


Query: 89  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILS 148
           + DLSS V+RR+G+KG +PK HTM+HENDS+HSISLE+VESS NYERS KSLS+ESFILS
Sbjct: 29  KADLSSFVHRRYGNKGTRPKWHTMSHENDSLHSISLENVESSENYERSSKSLSEESFILS 88

Query: 149 SMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNI 208
           SMNMNFLERL LAWRIIFP +S PK+ SNA IAKQRLKMILLSDRCAVNDEAKQKIVDNI
Sbjct: 89  SMNMNFLERLTLAWRIIFP-SSAPKMESNATIAKQRLKMILLSDRCAVNDEAKQKIVDNI 148

Query: 209 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDD 268
           LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEV    NT+LKDD
Sbjct: 149 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGEIANTNLKDD 208

Query: 269 GEGSASAGLIFDSLIADGKGS 290
           GE S SAGLIFDSL+ADGKGS
Sbjct: 209 GEESGSAGLIFDSLVADGKGS 228

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BLAST of ClCG05G023910 vs. TrEMBL
Match: A0A0A0KQJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G469010 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 7.4e-45
Identity = 112/210 (53.33%), Postives = 144/210 (68.57%), Query Frame = 1


Query: 80  SQGLKISFPRVDLSSSVYRRFG--SKGIKPKRHTMAHENDSIHSISLEDVESSANYERSP 139
           S  L+ SFP   +  S +   G  S  +  K    A ++ +   IS     SS ++E S 
Sbjct: 18  SHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRRGISQITTGSSESFELSS 77

Query: 140 KSLSQES--FILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCA 199
           K+ SQE+  F+L+++NMNF ERL LAWRI+FP  ++ K NSNA+IAKQRLKMIL +DRCA
Sbjct: 78  KTSSQEAETFLLNAINMNFFERLNLAWRILFPSPAS-KRNSNALIAKQRLKMILFADRCA 137

Query: 200 VNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSE 259
           V+DEAK+KIV NI+  LSDFVEI+S+DKVQ ++STD DL TIYSVTVPVRRVKAEYQ ++
Sbjct: 138 VSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYSVTVPVRRVKAEYQEAD 197

Query: 260 EVEATTNTDLKDDGEGSASAGLIFDSLIAD 286
           E    TN + KD+GE S S  + FD  I D
Sbjct: 198 ESGTITNIEYKDNGETSGSVDVRFDFFIPD 226

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BLAST of ClCG05G023910 vs. TrEMBL
Match: W9RCN4_9ROSA (Cell division topological specificity factor-like protein OS=Morus notabilis GN=L484_004236 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.4e-43
Identity = 105/199 (52.76%), Postives = 134/199 (67.34%), Query Frame = 1


Query: 89  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQE--SFI 148
           +VD ++ +Y       + PK   +A ++  +   + +      + + SP+S SQE  SF+
Sbjct: 29  KVDFTNFLYGGSSITDVTPKWPHVALDSRDLRRHTKQTSGIGGHVQLSPRSTSQEAESFL 88

Query: 149 LSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVD 208
            + +NM F ERL LAW+IIFP   + K +SNA  AKQRLKMIL SDRCAV+DEAKQKIV 
Sbjct: 89  FNVVNMGFFERLNLAWKIIFPSQKSRK-SSNARTAKQRLKMILFSDRCAVSDEAKQKIVS 148

Query: 209 NILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLK 268
           NI+  LSDFVEI+S+DKVQ +VSTDLDL TIYSVTVPVRRVKAEYQ  +E  + TN + K
Sbjct: 149 NIVRALSDFVEIESQDKVQLSVSTDLDLGTIYSVTVPVRRVKAEYQMGDEAGSITNIEYK 208

Query: 269 DDGEGSASAGLIFDSLIAD 286
           D GE S S  + FD  I D
Sbjct: 209 DTGETSGSVDVRFDFYIPD 226

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BLAST of ClCG05G023910 vs. TrEMBL
Match: A0A0D2T2C7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G178200 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.8e-43
Identity = 103/183 (56.28%), Postives = 130/183 (71.04%), Query Frame = 1


Query: 105 IKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQE--SFILSSMNMNFLERLILAW 164
           I PK + M   + S  S +   V    +Y+ SP ++ +E  SF+L ++NM+F ERL LAW
Sbjct: 45  ITPKWNGMTINSRSFGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAW 104

Query: 165 RIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSED 224
           +I+FP  ++ + +SNA IAKQRLKMIL SDRCAV+DEAKQKIV NI+  LSDFVEI+S+D
Sbjct: 105 KIVFPSPASRR-SSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKD 164

Query: 225 KVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSL 284
           KVQ +VSTD DL TIYSVTVPVRRVKAEYQ ++E    TN D KD GE S S  + FD  
Sbjct: 165 KVQLSVSTDSDLGTIYSVTVPVRRVKAEYQEADETGTITNIDYKDTGERSGSVDVRFDFY 224

Query: 285 IAD 286
           + D
Sbjct: 225 VPD 226

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BLAST of ClCG05G023910 vs. TrEMBL
Match: A0A0B0NF22_GOSAR (Cell division topological specificity factor, chloroplastic-like protein OS=Gossypium arboreum GN=F383_12845 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.1e-43
Identity = 103/183 (56.28%), Postives = 131/183 (71.58%), Query Frame = 1


Query: 105 IKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQE--SFILSSMNMNFLERLILAW 164
           I PK + +   + SI S +   V    +Y+ SP ++ +E  SF+L ++NM+F ERL LAW
Sbjct: 45  ITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAW 104

Query: 165 RIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSED 224
           +I+FP  ++ + +SNA IAKQRLKMIL SDRCAV+DEAKQKIV NI+  LSDFVEI+S+D
Sbjct: 105 KIVFPSPASRR-SSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKD 164

Query: 225 KVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSL 284
           KVQ +VSTD DL TIYSVTVPVRRVKAEYQ ++E    TN D KD GE S S  + FD  
Sbjct: 165 KVQLSVSTDSDLGTIYSVTVPVRRVKAEYQEADESGTITNIDYKDTGERSGSVDVRFDFY 224

Query: 285 IAD 286
           + D
Sbjct: 225 VPD 226

[Close]

BLAST of ClCG05G023910 vs. TAIR10
Match: AT1G69390.1 (AT1G69390.1 homologue of bacterial MinE 1)

HSP 1 Score: 166.8 bits (421), Expect = 2.0e-41
Identity = 90/153 (58.82%), Postives = 110/153 (71.90%), Query Frame = 1


Query: 129 SSANYERSPKSLSQE--SFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLK 188
           ++ +YE SP    QE  SF+ +++NM F +RL LAW+IIFP  ++ + +SNA IAKQRLK
Sbjct: 74  NTGDYELSPSPAEQEIESFLYNAINMGFFDRLNLAWKIIFPSHASRR-SSNARIAKQRLK 133

Query: 189 MILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRR 248
           MIL SDRC V+DEAK+KIV+NI+  LSDFVEI+SE+KVQ NVSTD DL TIYSVTVPVRR
Sbjct: 134 MILFSDRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQLNVSTDGDLGTIYSVTVPVRR 193

Query: 249 VKAEYQGSEEVEATTNTDLKDDGEGSASAGLIF 280
           VK EYQ  +E    TN + KD  +GS      F
Sbjct: 194 VKPEYQDVDEAGTITNVEYKDTRDGSVDVRFDF 225

[Close]

BLAST of ClCG05G023910 vs. NCBI nr
Match: gi|659091174|ref|XP_008446409.1| (PREDICTED: cell division topological specificity factor homolog, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 332.8 bits (852), Expect = 6.0e-88
Identity = 173/201 (86.07%), Postives = 185/201 (92.04%), Query Frame = 1


Query: 89  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILS 148
           + D SS V+RR+G+KG +PK HTMAHENDS+HSISLE+VE+SA YE+S KSLSQESFILS
Sbjct: 29  KADFSSFVHRRYGNKGTRPKWHTMAHENDSLHSISLENVENSAKYEQSSKSLSQESFILS 88

Query: 149 SMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNI 208
           SMNMNFLERL LAWRIIFP +S PK+ SNA IAKQRLKMILLSDRCAVNDEAKQKIVDNI
Sbjct: 89  SMNMNFLERLKLAWRIIFP-SSAPKMKSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNI 148

Query: 209 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDD 268
           LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEV A TNTDLKDD
Sbjct: 149 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGAITNTDLKDD 208

Query: 269 GEGSASAGLIFDSLIADGKGS 290
           GE S SAGLIFDSL+ADGKGS
Sbjct: 209 GEESGSAGLIFDSLVADGKGS 228

[Close]

BLAST of ClCG05G023910 vs. NCBI nr
Match: gi|778705531|ref|XP_004135443.2| (PREDICTED: cell division topological specificity factor homolog, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 330.1 bits (845), Expect = 3.9e-87
Identity = 171/201 (85.07%), Postives = 184/201 (91.54%), Query Frame = 1


Query: 89  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILS 148
           + DLSS V+RR+G+KG +PK HTM+HENDS+HSISLE+VESS NYERS KSLS+ESFILS
Sbjct: 29  KADLSSFVHRRYGNKGTRPKWHTMSHENDSLHSISLENVESSENYERSSKSLSEESFILS 88

Query: 149 SMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNI 208
           SMNMNFLERL LAWRIIFP +S PK+ SNA IAKQRLKMILLSDRCAVNDEAKQKIVDNI
Sbjct: 89  SMNMNFLERLTLAWRIIFP-SSAPKMESNATIAKQRLKMILLSDRCAVNDEAKQKIVDNI 148

Query: 209 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDD 268
           LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEV    NT+LKDD
Sbjct: 149 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGEIANTNLKDD 208

Query: 269 GEGSASAGLIFDSLIADGKGS 290
           GE S SAGLIFDSL+ADGKGS
Sbjct: 209 GEESGSAGLIFDSLVADGKGS 228

[Close]

BLAST of ClCG05G023910 vs. NCBI nr
Match: gi|659091172|ref|XP_008446408.1| (PREDICTED: cell division topological specificity factor homolog, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 328.9 bits (842), Expect = 8.6e-87
Identity = 171/199 (85.93%), Postives = 183/199 (91.96%), Query Frame = 1


Query: 89  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILS 148
           + D SS V+RR+G+KG +PK HTMAHENDS+HSISLE+VE+SA YE+S KSLSQESFILS
Sbjct: 29  KADFSSFVHRRYGNKGTRPKWHTMAHENDSLHSISLENVENSAKYEQSSKSLSQESFILS 88

Query: 149 SMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNI 208
           SMNMNFLERL LAWRIIFP +S PK+ SNA IAKQRLKMILLSDRCAVNDEAKQKIVDNI
Sbjct: 89  SMNMNFLERLKLAWRIIFP-SSAPKMKSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNI 148

Query: 209 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDD 268
           LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEV A TNTDLKDD
Sbjct: 149 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGAITNTDLKDD 208

Query: 269 GEGSASAGLIFDSLIADGK 288
           GE S SAGLIFDSL+ADGK
Sbjct: 209 GEESGSAGLIFDSLVADGK 226

[Close]

BLAST of ClCG05G023910 vs. NCBI nr
Match: gi|1009154389|ref|XP_015895143.1| (PREDICTED: cell division topological specificity factor homolog, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 193.0 bits (489), Expect = 7.4e-46
Identity = 114/215 (53.02%), Postives = 145/215 (67.44%), Query Frame = 1


Query: 79  SSQGLKISFP--RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERS 138
           +++ L+ SFP  +VD +        +  I  K   M  +N  +   +      + + E S
Sbjct: 17  TTRTLRSSFPSSKVDFNHFFCGGSSTSEITTKWPYMVLDNRDMRRHARRISGITGDVEIS 76

Query: 139 PKSLSQE--SFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRC 198
           PKS+S+E  SF+L+++NM+F ERL LAW+IIFP + T K +SNA IAKQRLKMIL SDRC
Sbjct: 77  PKSISEEADSFLLNAINMSFFERLNLAWKIIFP-SPTFKRSSNARIAKQRLKMILFSDRC 136

Query: 199 AVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGS 258
           AV+DEAKQKIV NI+  LSDFVEI+S+DKVQ NVSTD DL TIYS+TVPVRRVK EYQ  
Sbjct: 137 AVSDEAKQKIVKNIVHALSDFVEIESQDKVQLNVSTDTDLGTIYSITVPVRRVKPEYQDV 196

Query: 259 EEVEATTNTDLKDDGEGSASAGLIFDSLIADGKGS 290
           +EV A TN + KD GE S S  + FD  I D + S
Sbjct: 197 DEVGAITNVEYKDTGESSGSVDVRFDFFIPDERNS 230

[Close]

BLAST of ClCG05G023910 vs. NCBI nr
Match: gi|449452056|ref|XP_004143776.1| (PREDICTED: cell division topological specificity factor homolog, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44
Identity = 112/210 (53.33%), Postives = 144/210 (68.57%), Query Frame = 1


Query: 80  SQGLKISFPRVDLSSSVYRRFG--SKGIKPKRHTMAHENDSIHSISLEDVESSANYERSP 139
           S  L+ SFP   +  S +   G  S  +  K    A ++ +   IS     SS ++E S 
Sbjct: 18  SHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRRGISQITTGSSESFELSS 77

Query: 140 KSLSQES--FILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCA 199
           K+ SQE+  F+L+++NMNF ERL LAWRI+FP  ++ K NSNA+IAKQRLKMIL +DRCA
Sbjct: 78  KTSSQEAETFLLNAINMNFFERLNLAWRILFPSPAS-KRNSNALIAKQRLKMILFADRCA 137

Query: 200 VNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSE 259
           V+DEAK+KIV NI+  LSDFVEI+S+DKVQ ++STD DL TIYSVTVPVRRVKAEYQ ++
Sbjct: 138 VSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYSVTVPVRRVKAEYQEAD 197

Query: 260 EVEATTNTDLKDDGEGSASAGLIFDSLIAD 286
           E    TN + KD+GE S S  + FD  I D
Sbjct: 198 ESGTITNIEYKDNGETSGSVDVRFDFFIPD 226

The following BLAST results are available for this feature:

BLAST of ClCG05G023910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MINE1_ARATH	3.6e-40	58.82	Cell division topological specificity factor homolog, chloroplastic OS=Arabidops...	[more]

BLAST of ClCG05G023910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQS2_CUCSA	2.7e-87	85.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606490 PE=4 SV=1	[more]
A0A0A0KQJ9_CUCSA	7.4e-45	53.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G469010 PE=4 SV=1	[more]
W9RCN4_9ROSA	1.4e-43	52.76	Cell division topological specificity factor-like protein OS=Morus notabilis GN=...	[more]
A0A0D2T2C7_GOSRA	1.8e-43	56.28	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G178200 PE=4 SV=1	[more]
A0A0B0NF22_GOSAR	3.1e-43	56.28	Cell division topological specificity factor, chloroplastic-like protein OS=Goss...	[more]

BLAST of ClCG05G023910 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G69390.1	2.0e-41	58.82	homologue of bacterial MinE 1	[more]

BLAST of ClCG05G023910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091174\|ref\|XP_008446409.1\|	6.0e-88	86.07	PREDICTED: cell division topological specificity factor homolog, chloroplastic-l...	[more]
gi\|778705531\|ref\|XP_004135443.2\|	3.9e-87	85.07	PREDICTED: cell division topological specificity factor homolog, chloroplastic-l...	[more]
gi\|659091172\|ref\|XP_008446408.1\|	8.6e-87	85.93	PREDICTED: cell division topological specificity factor homolog, chloroplastic-l...	[more]
gi\|1009154389\|ref\|XP_015895143.1\|	7.4e-46	53.02	PREDICTED: cell division topological specificity factor homolog, chloroplastic [...	[more]
gi\|449452056\|ref\|XP_004143776.1\|	1.1e-44	53.33	PREDICTED: cell division topological specificity factor homolog, chloroplastic-l...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005527	MinE

Vocabulary: **Biological Process**
Term	Definition
GO:0032955	regulation of barrier septum assembly
GO:0051301	cell division

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032955	regulation of barrier septum assembly
biological_process	GO:0051301	cell division
biological_process	GO:0045901	positive regulation of translational elongation
biological_process	GO:0045905	positive regulation of translational termination
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0006452	translational frameshifting
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0003743	translation initiation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G023910.1	ClCG05G023910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005527	Septum formation topological specificity factor MinE	PFAM	PF03776	MinE	coord: 179..245 score: 4.6
None	No IPR available	PANTHER	PTHR33404	FAMILY NOT NAMED	coord: 78..280 score: 2.3
None	No IPR available	PANTHER	PTHR33404:SF2	CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR HOMOLOG, CHLOROPLASTIC	coord: 78..280 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G023910	Csa5G606490	Cucumber (Chinese Long) v2	cuwcgB394
ClCG05G023910	MELO3C012132	Melon (DHL92) v3.5.1	mewcgB062
ClCG05G023910	Cla010218	Watermelon (97103) v1	wcgwmB285
ClCG05G023910	Cla97C05G105930	Watermelon (97103) v2	wcgwmbB229
ClCG05G023910	CSPI05G24110	Wild cucumber (PI 183967)	cpiwcgB412
ClCG05G023910	Cucsa.284710	Cucumber (Gy14) v1	cgywcgB498
ClCG05G023910	CmaCh04G016860	Cucurbita maxima (Rimu)	cmawcgB658
ClCG05G023910	CmoCh04G017670	Cucurbita moschata (Rifu)	cmowcgB659
ClCG05G023910	Lsi04G003840	Bottle gourd (USVL1VR-Ls)	lsiwcgB283
ClCG05G023910	CsGy5G023660	Cucumber (Gy14) v2	cgybwcgB359
ClCG05G023910	MELO3C012132.2	Melon (DHL92) v3.6.1	medwcgB061
ClCG05G023910	CsaV3_5G033110	Cucumber (Chinese Long) v3	cucwcgB415

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G023910	Wax gourd	wcgwgoB424
ClCG05G023910	Wax gourd	wcgwgoB464
ClCG05G023910	Wax gourd	wcgwgoB467
ClCG05G023910	Wax gourd	wcgwgoB487
ClCG05G023910	Watermelon (Charleston Gray)	wcgwcgB070
ClCG05G023910	Watermelon (Charleston Gray)	wcgwcgB148
ClCG05G023910	Watermelon (Charleston Gray)	wcgwcgB155
ClCG05G023910	Cucumber (Gy14) v1	cgywcgB162
ClCG05G023910	Cucumber (Gy14) v1	cgywcgB364
ClCG05G023910	Cucurbita maxima (Rimu)	cmawcgB206
ClCG05G023910	Cucurbita maxima (Rimu)	cmawcgB364
ClCG05G023910	Cucurbita maxima (Rimu)	cmawcgB418
ClCG05G023910	Cucurbita moschata (Rifu)	cmowcgB061
ClCG05G023910	Cucurbita moschata (Rifu)	cmowcgB358
ClCG05G023910	Cucurbita moschata (Rifu)	cmowcgB417
ClCG05G023910	Cucurbita moschata (Rifu)	cmowcgB667
ClCG05G023910	Wild cucumber (PI 183967)	cpiwcgB065
ClCG05G023910	Wild cucumber (PI 183967)	cpiwcgB066
ClCG05G023910	Cucumber (Chinese Long) v2	cuwcgB061
ClCG05G023910	Cucumber (Chinese Long) v2	cuwcgB062
ClCG05G023910	Melon (DHL92) v3.5.1	mewcgB156
ClCG05G023910	Melon (DHL92) v3.5.1	mewcgB249
ClCG05G023910	Watermelon (97103) v1	wcgwmB303
ClCG05G023910	Watermelon (97103) v1	wcgwmB308
ClCG05G023910	Cucurbita pepo (Zucchini)	cpewcgB045
ClCG05G023910	Cucurbita pepo (Zucchini)	cpewcgB393
ClCG05G023910	Cucurbita pepo (Zucchini)	cpewcgB516
ClCG05G023910	Cucurbita pepo (Zucchini)	cpewcgB610
ClCG05G023910	Bottle gourd (USVL1VR-Ls)	lsiwcgB245
ClCG05G023910	Bottle gourd (USVL1VR-Ls)	lsiwcgB197
ClCG05G023910	Cucumber (Gy14) v2	cgybwcgB058
ClCG05G023910	Melon (DHL92) v3.6.1	medwcgB147
ClCG05G023910	Melon (DHL92) v3.6.1	medwcgB241
ClCG05G023910	Silver-seed gourd	carwcgB0055
ClCG05G023910	Silver-seed gourd	carwcgB0099
ClCG05G023910	Silver-seed gourd	carwcgB0235
ClCG05G023910	Silver-seed gourd	carwcgB0386
ClCG05G023910	Cucumber (Chinese Long) v3	cucwcgB069
ClCG05G023910	Cucumber (Chinese Long) v3	cucwcgB070
ClCG05G023910	Cucumber (Chinese Long) v3	cucwcgB418
ClCG05G023910	Watermelon (97103) v2	wcgwmbB227