ClCG05G021770 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G021770
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Aminoadipate-semialdehyde dehydrogenase, putative
Location	CG_Chr05 : 33843826 .. 33844201 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGGGGCGTTCAGAGATGGGCTGTTGACATTTCTGAGTGGAACCCTTCTCCCCATGACTTCTCCTCTGCCCTAACTCTACTCCCTCGCCATGAACAGTCCTCCATCCTTAGGTTACCTTCTGCAATTCAAATTTTCCTGTTTTGTGCTTGCCTCTTTTTCTTTTATGTTTGTGTTTGCTCCTTCAGAAATTCATGGTAATCGAAATTTGACTTCTGGAAACGCAAATTTTGAATGAGGAGACATGAGCGTTTTCGATATGATCACTTGTTATTTCATTTCTGTTTGTTTCTCCAGAATCTTGGTATATAAATTGATACTCTTTCTGAGATCAGCTGTGGAGTTCTTGGGTAGTTTGTTGCATAAGATTTGA

mRNA sequence

ATGGAGAGGGGCGTTCAGAGATGGGCTGTTGACATTTCTGAGTGGAACCCTTCTCCCCATGACTTCTCCTCTGCCCTAACTCTACTCCCTCGCCATGAACAGTCCTCCATCCTTAGGTTACCTTCTGCAATTCAAATTTTCCTGTTTTGTGCTTGCCTCTTTTTCTTTTATGTTTGTGTTTGCTCCTTCAGAAATTCATGAATCTTGGTATATAAATTGATACTCTTTCTGAGATCAGCTGTGGAGTTCTTGGGTAGTTTGTTGCATAAGATTTGA

Coding sequence (CDS)

ATGGAGAGGGGCGTTCAGAGATGGGCTGTTGACATTTCTGAGTGGAACCCTTCTCCCCATGACTTCTCCTCTGCCCTAACTCTACTCCCTCGCCATGAACAGTCCTCCATCCTTAGGTTACCTTCTGCAATTCAAATTTTCCTGTTTTGTGCTTGCCTCTTTTTCTTTTATGTTTGTGTTTGCTCCTTCAGAAATTCATGA

Protein sequence

MERGVQRWAVDISEWNPSPHDFSSALTLLPRHEQSSILRLPSAIQIFLFCACLFFFYVCVCSFRNS

Homology

[Close]

BLAST of ClCG05G021770 vs. TrEMBL
Match: A0A0A0KRD2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G614660 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 9.4e-12
Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 1


Query: 1  MERGVQRWAVDISEWNPSPHDFSSALTLLPRHEQSSILR 40
          MERGVQRWAVDIS+WNPSP +FSSALTLLPRHE SSILR
Sbjct: 1  MERGVQRWAVDISQWNPSPREFSSALTLLPRHEHSSILR 39

[Close]

BLAST of ClCG05G021770 vs. TrEMBL
Match: A0A067LGT3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26494 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.0e-09
Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = 1


Query: 1  MERGVQRWAVDISEWNPSPHDFSSALTLLPRHEQSSILR 40
          MERGV+RW VDIS+WNPSPHDFS AL+LLP+H+ SSI R
Sbjct: 1  MERGVRRWIVDISKWNPSPHDFSFALSLLPQHDHSSITR 39

[Close]

BLAST of ClCG05G021770 vs. TrEMBL
Match: B9HVX4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s24500g PE=4 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 5.7e-09
Identity = 28/39 (71.79%), Postives = 36/39 (92.31%), Query Frame = 1


Query: 1  MERGVQRWAVDISEWNPSPHDFSSALTLLPRHEQSSILR 40
          ME+GV+RW VD S+WNP+PHDFSSAL++LP+HE+SSI R
Sbjct: 1  MEKGVKRWLVDTSKWNPTPHDFSSALSVLPQHERSSITR 39

[Close]

BLAST of ClCG05G021770 vs. TrEMBL
Match: W9R2F9_9ROSA (L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Morus notabilis GN=L484_018361 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.8e-08
Identity = 28/39 (71.79%), Postives = 35/39 (89.74%), Query Frame = 1


Query: 1  MERGVQRWAVDISEWNPSPHDFSSALTLLPRHEQSSILR 40
          MERGVQRWAVDIS+W+P+P DFS AL+LLP H+ +SI+R
Sbjct: 1  MERGVQRWAVDISKWDPTPQDFSFALSLLPLHDHNSIIR 39

[Close]

BLAST of ClCG05G021770 vs. TrEMBL
Match: V4TZB7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016201mg PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.7e-08
Identity = 27/39 (69.23%), Postives = 34/39 (87.18%), Query Frame = 1


Query: 1  MERGVQRWAVDISEWNPSPHDFSSALTLLPRHEQSSILR 40
          ME+GVQRW VDIS+W+P+PHDFS AL LLP+H  SSI++
Sbjct: 1  MEKGVQRWVVDISKWDPTPHDFSFALYLLPQHHHSSIIK 39

[Close]

BLAST of ClCG05G021770 vs. NCBI nr
Match: gi|449434500|ref|XP_004135034.1| (PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Cucumis sativus])

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-11
Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 1


Query: 1  MERGVQRWAVDISEWNPSPHDFSSALTLLPRHEQSSILR 40
          MERGVQRWAVDIS+WNPSP +FSSALTLLPRHE SSILR
Sbjct: 1  MERGVQRWAVDISQWNPSPREFSSALTLLPRHEHSSILR 39

[Close]

BLAST of ClCG05G021770 vs. NCBI nr
Match: gi|659091838|ref|XP_008446759.1| (PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like [Cucumis melo])

HSP 1 Score: 74.3 bits (181), Expect = 8.8e-11
Identity = 34/39 (87.18%), Postives = 36/39 (92.31%), Query Frame = 1


Query: 1  MERGVQRWAVDISEWNPSPHDFSSALTLLPRHEQSSILR 40
          MERGVQRWAVDIS+WNPSP +FSS LTLLPRHE SSILR
Sbjct: 1  MERGVQRWAVDISQWNPSPLEFSSVLTLLPRHEHSSILR 39

[Close]

BLAST of ClCG05G021770 vs. NCBI nr
Match: gi|694330881|ref|XP_009356131.1| (PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-09
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 1


Query: 1  MERGVQRWAVDISEWNPSPHDFSSALTLLPRHEQSSILR 40
          MERGVQRW VDISEW+PSPHDFSSAL+LLP  EQSS+ R
Sbjct: 1  MERGVQRWVVDISEWDPSPHDFSSALSLLPPLEQSSVTR 39

[Close]

BLAST of ClCG05G021770 vs. NCBI nr
Match: gi|694330883|ref|XP_009356132.1| (PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-09
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 1


Query: 1  MERGVQRWAVDISEWNPSPHDFSSALTLLPRHEQSSILR 40
          MERGVQRW VDISEW+PSPHDFSSAL+LLP  EQSS+ R
Sbjct: 1  MERGVQRWVVDISEWDPSPHDFSSALSLLPPLEQSSVTR 39

[Close]

BLAST of ClCG05G021770 vs. NCBI nr
Match: gi|802558660|ref|XP_012065756.1| (PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like [Jatropha curcas])

HSP 1 Score: 69.3 bits (168), Expect = 2.8e-09
Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = 1


Query: 1  MERGVQRWAVDISEWNPSPHDFSSALTLLPRHEQSSILR 40
          MERGV+RW VDIS+WNPSPHDFS AL+LLP+H+ SSI R
Sbjct: 1  MERGVRRWIVDISKWNPSPHDFSFALSLLPQHDHSSITR 39

The following BLAST results are available for this feature:

BLAST of ClCG05G021770 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRD2_CUCSA	9.4e-12	89.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G614660 PE=4 SV=1	[more]
A0A067LGT3_JATCU	2.0e-09	76.92	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26494 PE=4 SV=1	[more]
B9HVX4_POPTR	5.7e-09	71.79	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s24500g PE=4 SV=2	[more]
W9R2F9_9ROSA	2.8e-08	71.79	L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Mor...	[more]
V4TZB7_9ROSI	3.7e-08	69.23	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016201mg PE=4 SV=1	[more]

BLAST of ClCG05G021770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434500\|ref\|XP_004135034.1\|	1.4e-11	89.74	PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transfe...	[more]
gi\|659091838\|ref\|XP_008446759.1\|	8.8e-11	87.18	PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transfe...	[more]
gi\|694330881\|ref\|XP_009356131.1\|	1.3e-09	82.05	PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transfe...	[more]
gi\|694330883\|ref\|XP_009356132.1\|	1.3e-09	82.05	PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transfe...	[more]
gi\|802558660\|ref\|XP_012065756.1\|	2.8e-09	76.92	PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transfe...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015940	pantothenate biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008897	holo-[acyl-carrier-protein] synthase activity
molecular_function	GO:0000287	magnesium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G021770.1	ClCG05G021770.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G021770	Cucurbita pepo (Zucchini)	cpewcgB045
ClCG05G021770	Cucurbita pepo (Zucchini)	cpewcgB388
ClCG05G021770	Cucurbita pepo (Zucchini)	cpewcgB398
ClCG05G021770	Bottle gourd (USVL1VR-Ls)	lsiwcgB283
ClCG05G021770	Bottle gourd (USVL1VR-Ls)	lsiwcgB435
ClCG05G021770	Cucumber (Gy14) v2	cgybwcgB359
ClCG05G021770	Melon (DHL92) v3.6.1	medwcgB061
ClCG05G021770	Silver-seed gourd	carwcgB0816
ClCG05G021770	Silver-seed gourd	carwcgB1023
ClCG05G021770	Cucumber (Chinese Long) v3	cucwcgB415
ClCG05G021770	Watermelon (97103) v2	wcgwmbB229
ClCG05G021770	Wax gourd	wcgwgoB469
ClCG05G021770	Watermelon (Charleston Gray)	wcgwcgB167
ClCG05G021770	Cucumber (Gy14) v1	cgywcgB498
ClCG05G021770	Cucurbita maxima (Rimu)	cmawcgB364
ClCG05G021770	Cucurbita maxima (Rimu)	cmawcgB655
ClCG05G021770	Cucurbita maxima (Rimu)	cmawcgB664
ClCG05G021770	Cucurbita moschata (Rifu)	cmowcgB358
ClCG05G021770	Cucurbita moschata (Rifu)	cmowcgB654
ClCG05G021770	Cucurbita moschata (Rifu)	cmowcgB665
ClCG05G021770	Wild cucumber (PI 183967)	cpiwcgB412
ClCG05G021770	Cucumber (Chinese Long) v2	cuwcgB394
ClCG05G021770	Melon (DHL92) v3.5.1	mewcgB062
ClCG05G021770	Watermelon (97103) v1	wcgwmB274
ClCG05G021770	Watermelon (97103) v1	wcgwmB285