ClCG05G021280 (gene) Watermelon (Charleston Gray)

NameClCG05G021280
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr05 : 33272427 .. 33273785 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGACTTGCAGAGTTATCGAGTTAAAATAAGAGCCCCCATCTTAATGGCCAAACAAGGTGTAGCCCTCACCAAACAAAATTTCCATCATTGCACAACTTGTGAGATCAATTAAGCTCAACATTTCCAACTACATTCAATGGAAATCTCGGGTTGGCCAAACAAAGTGGTAATTTAGATTTCTGATTCTTTTTGTTGCTCGCTAATTTCTGCAGTAATTGTTGTCGCCATCTCGATTATGATTTTTTTTTTTTTTTTTGTGAAAATTTTATGATGTTGTTTTATTAGTTTATCTAGATTGAGTGTTTATTATTGTTGCAGATCGCTTTTTTCCATATTGATTGTCCTCAAATTTATGCCGACGAGGGAGGTAATCATGACATCTTCTTGATTATTAATGTCTTGCAGTGGATGAGGGTTACTGGTTGAAGTAATCGTTAATATCTCCGTGTGCAAGTTTTCTTGTTTGCCTTTTGTATTAAATTCAAATGTCTGCTTTTGAAGCTTTTGCTCTTTGTATTTGGTCATCGTTGATAGTGAAAGTGGTTTGTTTGCAGTGGCTTGTGCTATTTGTTCAATAGAAGTTTTTTTTGTTTGTCTGTCTGTTTAATAGGTGTCTATCAAAAGGTTGAATTCAACCTCTAAAAGAAGTATAAATTGGGAGATCGAAAAGAATCTAAGGAATTATGAGTGAACCAAAGAAGGCTTGCAGATTTTTTTAATTACCTGCAAAAATCAACTTGAAAAAAAAAATTATATTTAGCAAAGCAGTAGTTTTATATTAAAATCGGGTTTCTTGACTTGCTCTATTTTATCTTCTTACCTTGTTGGCTTTCTTTATTTTCAGTGCTAAAGCTAATATGCACCATAAGATTGAATGTAGGTGCATGCCTTACTGCTGCTTGTTCAATTTTTTCTGGTTTTGTTCAGGGTTGAGGGTTCTAGTTGAAAATTAGTGCTGAATAAAACTTGAGGCTTTATGTAGTTACTACCATATGGATTGGCTAATTCTTAAGTATTGAAATGTTTGAGTTAATTTGATTTGTTTAGTATTTGCGTACGTTAGTTTTGAAAAGTTAGTGAAGTTTGGTCGATTTATTTATTAGTTTTTTGTAATGCTTATACATTGTTATATTCACAAGTTTAAATTTAGTTGTTCTTGCGGGTTTTACATGCTTAAAGGAGTTTTTGCATGCTTAGATTGCGCAACAAATATTAAAATGCAATGGGATACCTGAAAGGTATCTTTTCCGGCTTCTTGAGATTTTCATTTTCATTTTCATTCTAGGTTGTCACATGAACTTGAATCACAAGCTCTAGAGTGGATGTACTCCAGTGAAGCCTCTCGGAATCCTGAATAA

mRNA sequence

AGGACTTGCAGAGTTATCGAGTTAAAATAAGAGCCCCCATCTTAATGGCCAAACAAGGTGTAGCCCTCACCAAACAAAATTTCCATCATTGCACAACTTGTGAGATCAATTAAGCTCAACATTTCCAACTACATTCAATGGAAATCTCGGGTTGGCCAAACAAAGTGATCGCTTTTTTCCATATTGATTGTCCTCAAATTTATGCCGACGAGGGAGTGCTAAAGCTAATATGCACCATAAGATTGAATATTGCGCAACAAATATTAAAATGCAATGGGATACCTGAAAGGTTGTCACATGAACTTGAATCACAAGCTCTAGAGTGGATGTACTCCAGTGAAGCCTCTCGGAATCCTGAATAA

Coding sequence (CDS)

ATGGAAATCTCGGGTTGGCCAAACAAAGTGATCGCTTTTTTCCATATTGATTGTCCTCAAATTTATGCCGACGAGGGAGTGCTAAAGCTAATATGCACCATAAGATTGAATATTGCGCAACAAATATTAAAATGCAATGGGATACCTGAAAGGTTGTCACATGAACTTGAATCACAAGCTCTAGAGTGGATGTACTCCAGTGAAGCCTCTCGGAATCCTGAATAA

Protein sequence

MEISGWPNKVIAFFHIDCPQIYADEGVLKLICTIRLNIAQQILKCNGIPERLSHELESQALEWMYSSEASRNPE
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G021280.1ClCG05G021280.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG05G021280Cla97C05G102960Watermelon (97103) v2wcgwmbB229
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G021280Cucurbita pepo (Zucchini)cpewcgB045
ClCG05G021280Cucurbita pepo (Zucchini)cpewcgB388
ClCG05G021280Cucurbita pepo (Zucchini)cpewcgB398
ClCG05G021280Bottle gourd (USVL1VR-Ls)lsiwcgB283
ClCG05G021280Bottle gourd (USVL1VR-Ls)lsiwcgB435
ClCG05G021280Cucumber (Gy14) v2cgybwcgB136
ClCG05G021280Cucumber (Gy14) v2cgybwcgB359
ClCG05G021280Cucumber (Gy14) v2cgybwcgB434
ClCG05G021280Melon (DHL92) v3.6.1medwcgB061
ClCG05G021280Melon (DHL92) v3.6.1medwcgB285
ClCG05G021280Silver-seed gourdcarwcgB0258
ClCG05G021280Silver-seed gourdcarwcgB0467
ClCG05G021280Silver-seed gourdcarwcgB0661
ClCG05G021280Silver-seed gourdcarwcgB0816
ClCG05G021280Cucumber (Chinese Long) v3cucwcgB415
ClCG05G021280Watermelon (97103) v2wcgwmbB244
ClCG05G021280Wax gourdwcgwgoB460
ClCG05G021280Wax gourdwcgwgoB469
ClCG05G021280Watermelon (Charleston Gray)wcgwcgB167
ClCG05G021280Cucumber (Gy14) v1cgywcgB530
ClCG05G021280Cucumber (Gy14) v1cgywcgB662
ClCG05G021280Cucurbita maxima (Rimu)cmawcgB263
ClCG05G021280Cucurbita maxima (Rimu)cmawcgB364
ClCG05G021280Cucurbita maxima (Rimu)cmawcgB655
ClCG05G021280Cucurbita maxima (Rimu)cmawcgB664
ClCG05G021280Cucurbita moschata (Rifu)cmowcgB253
ClCG05G021280Cucurbita moschata (Rifu)cmowcgB358
ClCG05G021280Cucurbita moschata (Rifu)cmowcgB654
ClCG05G021280Cucurbita moschata (Rifu)cmowcgB665
ClCG05G021280Wild cucumber (PI 183967)cpiwcgB412
ClCG05G021280Cucumber (Chinese Long) v2cuwcgB394
ClCG05G021280Melon (DHL92) v3.5.1mewcgB062
ClCG05G021280Melon (DHL92) v3.5.1mewcgB292
ClCG05G021280Watermelon (97103) v1wcgwmB274
ClCG05G021280Watermelon (97103) v1wcgwmB285