ClCG05G019640 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCTCCTTGTTATTTGTAAATGTTGATGCCATATTCAATCCTATGACTAATGAGTTCGTCCAAGTTCCTCGACATGAGTTAGATGGTGATATTCACTACTTTGGATTTGGTTTAACCACTACAAGGAGGAATTACAAATTGTTTAGAGTTAGTCTCTCTGATTCTGAATCTAGCTCCATGATGGATGTTTTGACGTTTAGTAAGAGTGGAACCAATCCTAACCATGATCAGTGGAGGCATCTTCAATTCATGAATATCGGTGCTTACTTGAATGGAGTTATCTATTGGATAGGAAAAGAGAAATATAAAGAAAATGAGTAG ATGGTCTCCTTGTTATTTGTAAATGTTGATGCCATATTCAATCCTATGACTAATGAGTTCGTCCAAGTTCCTCGACATGAGTTAGATGGTGATATTCACTACTTTGGATTTGGTTTAACCACTACAAGGAGGAATTACAAATTGTTTAGAGTTAGTCTCTCTGATTCTGAATCTAGCTCCATGATGGATGTTTTGACGTTTAGTAAGAGTGGAACCAATCCTAACCATGATCAGTGGAGGCATCTTCAATTCATGAATATCGGTGCTTACTTGAATGGAGTTATCTATTGGATAGGAAAAGAGAAATATAAAGAAAATGAGTAG ATGGTCTCCTTGTTATTTGTAAATGTTGATGCCATATTCAATCCTATGACTAATGAGTTCGTCCAAGTTCCTCGACATGAGTTAGATGGTGATATTCACTACTTTGGATTTGGTTTAACCACTACAAGGAGGAATTACAAATTGTTTAGAGTTAGTCTCTCTGATTCTGAATCTAGCTCCATGATGGATGTTTTGACGTTTAGTAAGAGTGGAACCAATCCTAACCATGATCAGTGGAGGCATCTTCAATTCATGAATATCGGTGCTTACTTGAATGGAGTTATCTATTGGATAGGAAAAGAGAAATATAAAGAAAATGAGTAG MVSLLFVNVDAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLSDSESSSMMDVLTFSKSGTNPNHDQWRHLQFMNIGAYLNGVIYWIGKEKYKENE
BLAST of ClCG05G019640 vs. TrEMBL
Match: A0A0A0LPC6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014420 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 4.9e-18 Identity = 52/116 (44.83%), Postives = 69/116 (59.48%), Query Frame = 1
BLAST of ClCG05G019640 vs. TrEMBL
Match: A0A0A0K9U2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102760 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 2.4e-17 Identity = 53/99 (53.54%), Postives = 66/99 (66.67%), Query Frame = 1
BLAST of ClCG05G019640 vs. TrEMBL
Match: A0A0A0LWG1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257290 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.1e-16 Identity = 51/113 (45.13%), Postives = 67/113 (59.29%), Query Frame = 1
BLAST of ClCG05G019640 vs. TrEMBL
Match: A0A0A0KUJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643280 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 2.5e-14 Identity = 45/101 (44.55%), Postives = 62/101 (61.39%), Query Frame = 1
BLAST of ClCG05G019640 vs. TrEMBL
Match: A0A0A0LUP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014430 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.1e-13 Identity = 48/116 (41.38%), Postives = 63/116 (54.31%), Query Frame = 1
BLAST of ClCG05G019640 vs. NCBI nr
Match: gi|659120418|ref|XP_008460183.1| (PREDICTED: uncharacterized protein LOC103499068 [Cucumis melo]) HSP 1 Score: 116.3 bits (290), Expect = 3.3e-23 Identity = 62/113 (54.87%), Postives = 76/113 (67.26%), Query Frame = 1
BLAST of ClCG05G019640 vs. NCBI nr
Match: gi|700208649|gb|KGN63745.1| (hypothetical protein Csa_1G014420 [Cucumis sativus]) HSP 1 Score: 98.6 bits (244), Expect = 7.0e-18 Identity = 52/116 (44.83%), Postives = 69/116 (59.48%), Query Frame = 1
BLAST of ClCG05G019640 vs. NCBI nr
Match: gi|700191286|gb|KGN46490.1| (hypothetical protein Csa_6G102760 [Cucumis sativus]) HSP 1 Score: 96.3 bits (238), Expect = 3.5e-17 Identity = 53/99 (53.54%), Postives = 66/99 (66.67%), Query Frame = 1
BLAST of ClCG05G019640 vs. NCBI nr
Match: gi|700210076|gb|KGN65172.1| (hypothetical protein Csa_1G257290 [Cucumis sativus]) HSP 1 Score: 93.2 bits (230), Expect = 3.0e-16 Identity = 51/113 (45.13%), Postives = 67/113 (59.29%), Query Frame = 1
BLAST of ClCG05G019640 vs. NCBI nr
Match: gi|778665047|ref|XP_011648473.1| (PREDICTED: F-box protein At3g07870-like [Cucumis sativus]) HSP 1 Score: 89.7 bits (221), Expect = 3.3e-15 Identity = 49/108 (45.37%), Postives = 64/108 (59.26%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |