ClCG05G015840 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G015840
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Transposon protein, putative, CACTA, En/Spm sub-class
Location	CG_Chr05 : 27795522 .. 27799315 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGACATGGACATTCAACTTGACGAGTTAATCGCAATACTGACTGCTGTATATGCGGCCACCGTTACAATGGTGAATACTATCACCACTTTGCTGCAATTGGAGGACAATCGAGAGCGACCCTCTCCACTTATTAGACATCAAATTTGACAGTTGAATTTCTTTCGTTTGATTTATGAAGATGATCAGATGTGTCATGAGAACACTCGTATGGATAAGAGAATGTTCACGATTCTATTTCAATTACTTAGGACGATGGGTGGGCTAAGGCCAATAAAATATGTAGACGTGGAGGAAATGGTGGCCATCTTCTTGCACATAGTCGCACACGATGTAAAAAATTAAGTGATGCAACGCCAATTTGCAAGGTCTGGCTAGACAATGTCCAGGCACTTCAAAATATTGTGCTAAATGCAATATTGAGATTGTACGAAGATCTGTTGCGAAAACTAGAGCCAGTCACTAAGAATTGTACAGATGACAGATGGCGCTGGTTTCAGGTACAATCATCATGTTGTTTTAATGGTATTGTTTGCCGGTTTTGAAATTACCTTAAACTTATCATTGAAACAACGCTGTGTCACAGAATTGCTTAGGTGCATTTGACGGAACCCACATAAAGGTAAATGTCAGTGCAGCTGATCGACCACGCTATAGAACTAGAATGGGCGAGATCGCAACGAATGTCCTTATTGTATGCAATCAAAGTTGCGAGTTCATATTCGTTTTCACTGGATGGGAAGGATCAGTTGCTGACTCGAGAGTTCTGCGAGATGTAGTGTCCAGGCCAATTGGATTGAAAGTCCCAAGGGGTTAGTTTATAAATATATGTATACCCTTCCATACAAATGAACAATCATCAAGTGATAACTTGGCCCAATTTCGCAGGATACTATTATCTATGCGATGCCGATTATCCAAACGCCGAGGGATTTTTGGCTTCTTATTAGGGACAAAGATACCATTTGACCGAGTAGCGGGTAGGGAACCCGCCAACAAACCTTAGAGAGATTTTCAATATGATACATTCATCTGCCTGGAACGTCATTGAGAGAGCGTTCGGGATGTTGAAAGGTCGATGGGCAATCCTCCGAGGAAAATCATACTACTCGGTTGATGTGTAGTGCATGACCATACATGCATGTTGTCTACTGAAGGGTTGAAGCAAAACATAAGCACCCAAAAGGTTTAATATGGGAGTAATTAGCTTGTTTCCTATGGAGATGAAAATAAAGGGATCGTCATTTAAGCAAAGGTGATGAAGTCCGATTGATGAGAAAACAAGCTGCCAAAACACATTCTCCCCAAAACTAAATGGGAATATGTGATTGGAAAAGCAAAGAGCGAGCAACATCCAATAAGTGTTGGTGTTTCCTTTTCACTCGGAATTTTGTTTAGGGCAAGCAACACAAGAATACTGATGAATGCTAGCTCAGGGCATTGTTAGAACAAAAAACCTTGATGGAAGTGTTGTATTAATTCTCAACAAGTTTAAAAAATAATGAGACTATGTTTAACGCATCAACTTTTTTACGCATTAGAAACACCCATATGTACCATGAATTATCATCCACTAATGTGAGGAAGAAATGAAAACTAGCATGTGTAGGTGTTGGATATGGGCTTCATACATCACAATGCAATAAATCAAACATATGTTCAGCCATGTGAGATTGTGAGAATGAAATGATAACCTTCGTTGTTTAGCAAGAGGGCAAATAAAAAATGGCTCAAAATGAGAATGTTTATTTAATGGAAAATGTAATACATCATTTAAAACTGACATATGTTCGTATGATGGATGACCAAGTTTATCATGCCATGTATTAAGAGAAACAACATTAGAACACAGATTGGCAAATAGCGTGAAAAGCCACAATCGTGTTTAAAATAGCATTCTCTAATGGAGAAGTCTAGAGCAAATAAAGTCTCTGCCAAGCATTAGCCTTTCCAATTGTCTTGAAAGAGAACTTGTCCTGAATAAGACGTAAATCCCCGACAAATTGAGCAATCAAAGGTTGGTTAGTAGTGAATGTGATGATCAAAACAAGGTTGAAATGAAAGGATGGAATAAACAACACAATTTGAAGCAAAATATGTGAGTTTAGTCAAATATCATCAACAAATTCAACATTAACATGTGTTTGATTGGCCAGAGAAACAAACATTCTAGAAACAGGTTTAATAGAATCAAACATCTCTCGAACAAAGCATATATATGTAGACACACCATAATCAAGTATCCAACAATGAAGGGAAGAAGCAATATGAGTAATATCATAGCATATTCCGGCTACATGAGCTACAGTGACCTATGAATCAAAATTAATCTGTACTTTAGCAAGATGAATTGCAACATACTCAAAAGGCCCTAGCATTTTTCAGCAGTCAAACTAGATAACAAATCAAAGGGAGTAGCAACTGAAGAAGATGAAGTATTAGACTTCGTATTTAGTGGGGAAGGCTTTTGAGCTCCACTATGTCTCAGATGATATCCATGTAATTTGTAACATCGATCCATAGTGTGTCTAGAGATGTTACAATTAGTACAAATTAGTCGATCTTTCTCCTTATAGTTATTAATATTTGAAGTACGAGAAGAAGAAGTCGATGAATTCTTTACCAACAAAGCAGTGGCAACAACATAGGAAAGAGGAGGAGTTGAACAACAGAGGCTCTCTCTCATAGACCACCGCATTTATTCCCTAGTCCTCACCCATCATCAACCTATCCGACTAATCAGCAACAATTTTTAACCATGGGTTTAATCAACCTCATCAGCCATTTTATCCCCCTCATTATGCTCCTAGACCTAATTTCCCAAATCTTCCTCCAGCCCTTAATATCTTCCCATAACAGTTTGCTCCAAATCCCTATCCATCCTTACCTCAACCTCTTGTTGTGAAGCTTAATGACAATAATTGTGGAAGAAGCAGCTGCTGAATGTTGTTCAAGCCAATGGACTGGAAGGTTATCTTAATGGTACGGTTCCTGTTCCTTCAAAATATTTGGATGCTCAAAATATGCAGCTGAATCTAGAGTTTTCGACATGGGAAATGTATAATAGTTTCATTATGTGTTGGATTTACTCTTCATTTTCTGAAGAAAAGATGGGAGAAATTGTTAGTTTAGATACTGCTGCTAATATATGGAATTCGTTAAGAAGGTCTTATGATTCACAAACTACTGCACGTATTATGGGTTTAAAAGCCCATTTAAAAAGAACTTAGAAGGATGGTTCGTCTGTCAGTCAATATTTGTCTCAGATTAAAGAGGTTGCTGATAAGTTTAGTGCCATTGGAGAACTTATATCTTATAGAGATCATTTAGCTCATATTCTAGATAGTCTAGGAAGTGAATATAATGCTTTTGTCACTTATATTCAAAATTGCTCTGATAATCCTTCTATTGAAGATGTGAGAAGTTTATTGTTAGCTTATGAAGCCCCTTTGGAGAAACAAAATGTTGTTGATCAATTGAATGTTGCCCGAGCTAATTTTAGCAAGCTTTCTCTTCAACACAATAGCAAGCGGAATTCGTCTTGGTCCTTTCCAAACCCATCTTCCTCTGCTTCTCTAAGACCCTTTTCCCTTGTTTTTAATCTCCCCGCCTTCAATCAACCAAATCCAAACATACCGACGAGTGTTCTTGGTCGTCCTCAATTTTTCCCAAAATGGCCTCCAAAACCTTTTTCTTCTAAACCTCAATGCCAAATCTGTCACAAATTTGGTTATACCGCTCCTAACTGTCATCATCTTGCCTCTTTGGCCCACCAATCCATACCTCCTTAG

mRNA sequence

ATGGATGACATGGACATTCAACTTGACGAGTTAATCGCAATACTGACTGCTGTATATGCGGCCACCGTTACAATGATGTGTCATGAGAACACTCGTATGGATAAGAGAATGTTCACGATTCTATTTCAATTACTTAGGACGATGGGTGGGCTAAGGCCAATAAAATATGTAGACGTGGAGGAAATGGTGGCCATCTTCTTGCACATAGTCGCACACGATGTCTGGCTAGACAATGTCCAGGCACTTCAAAATATTGTGCTAAATGCAATATTGAGATTGTACGAAGATCTGTTGCGAAAACTAGAGCCAGTCACTAAGAATTGTACAGATGACAGATGGCGCTGGTTTCAGAATTGCTTAGGTGCATTTGACGGAACCCACATAAAGGTAAATGTCAGTGCAGCTGATCGACCACGCTATAGAACTAGAATGGGCGAGATCGCAACGAATGTCCTTATTGTATGCAATCAAAGTTGCGAGTTCATATTCGTTTTCACTGGATGGGAAGGATCAGTTGCTGACTCGAGAGTTCTGCGAGATGTAGTGTCCAGGCCAATTGGATTGAAAGTCCCAAGGGGGAACCCGCCAACAAACCTTAGAGAGATTTTCAATATGATACATTCATCTGCCTGGAACGTCATTGAGAGAGCGTTCGGGATGTTGAAAGGTCGATGGGCAATCCTCCGAGGAAAATCATACTACTCGAAGCAGCTGCTGAATGTTGTTCAAGCCAATGGACTGGAAGGTTATCTTAATGGTACGGTTCCTGTTCCTTCAAAATATTTGGATGCTCAAAATATGCAGCTGAATCTAGAGTTTTCGACATGGGAAATGTATAATAGTTTCATTATGTGTTGGATTTACTCTTCATTTTCTGAAGAAAAGATGGGAGAAATTGTTAGTTTAGATACTGCTGCTAATATATGGAATTCGTTAAGAAGTCAATATTTGTCTCAGATTAAAGAGGTTGCTGATAAGTTTAGTGCCATTGGAGAACTTATATCTTATAGAGATCATTTAGCTCATATTCTAGATAGTCTAGGAAGTGAATATAATGCTTTTGTCACTTATATTCAAAATTGCTCTGATAATCCTTCTATTGAAGATGTGAGAAGTTTATTGTTAGCTTATGAAGCCCCTTTGGAGAAACAAAATGTTGTTGATCAATTGAATGTTGCCCGAGCTAATTTTAGCAAGCTTTCTCTTCAACACAATAGCAAGCGGAATTCGTCTTGGTCCTTTCCAAACCCATCTTCCTCTGCTTCTCTAAGACCCTTTTCCCTTGTTTTTAATCTCCCCGCCTTCAATCAACCAAATCCAAACATACCGACGAGTGTTCTTGGTCGTCCTCAATTTTTCCCAAAATGGCCTCCAAAACCTTTTTCTTCTAAACCTCAATGCCAAATCTGTCACAAATTTGGTTATACCGCTCCTAACTGTCATCATCTTGCCTCTTTGGCCCACCAATCCATACCTCCTTAG

Coding sequence (CDS)

ATGGATGACATGGACATTCAACTTGACGAGTTAATCGCAATACTGACTGCTGTATATGCGGCCACCGTTACAATGATGTGTCATGAGAACACTCGTATGGATAAGAGAATGTTCACGATTCTATTTCAATTACTTAGGACGATGGGTGGGCTAAGGCCAATAAAATATGTAGACGTGGAGGAAATGGTGGCCATCTTCTTGCACATAGTCGCACACGATGTCTGGCTAGACAATGTCCAGGCACTTCAAAATATTGTGCTAAATGCAATATTGAGATTGTACGAAGATCTGTTGCGAAAACTAGAGCCAGTCACTAAGAATTGTACAGATGACAGATGGCGCTGGTTTCAGAATTGCTTAGGTGCATTTGACGGAACCCACATAAAGGTAAATGTCAGTGCAGCTGATCGACCACGCTATAGAACTAGAATGGGCGAGATCGCAACGAATGTCCTTATTGTATGCAATCAAAGTTGCGAGTTCATATTCGTTTTCACTGGATGGGAAGGATCAGTTGCTGACTCGAGAGTTCTGCGAGATGTAGTGTCCAGGCCAATTGGATTGAAAGTCCCAAGGGGGAACCCGCCAACAAACCTTAGAGAGATTTTCAATATGATACATTCATCTGCCTGGAACGTCATTGAGAGAGCGTTCGGGATGTTGAAAGGTCGATGGGCAATCCTCCGAGGAAAATCATACTACTCGAAGCAGCTGCTGAATGTTGTTCAAGCCAATGGACTGGAAGGTTATCTTAATGGTACGGTTCCTGTTCCTTCAAAATATTTGGATGCTCAAAATATGCAGCTGAATCTAGAGTTTTCGACATGGGAAATGTATAATAGTTTCATTATGTGTTGGATTTACTCTTCATTTTCTGAAGAAAAGATGGGAGAAATTGTTAGTTTAGATACTGCTGCTAATATATGGAATTCGTTAAGAAGTCAATATTTGTCTCAGATTAAAGAGGTTGCTGATAAGTTTAGTGCCATTGGAGAACTTATATCTTATAGAGATCATTTAGCTCATATTCTAGATAGTCTAGGAAGTGAATATAATGCTTTTGTCACTTATATTCAAAATTGCTCTGATAATCCTTCTATTGAAGATGTGAGAAGTTTATTGTTAGCTTATGAAGCCCCTTTGGAGAAACAAAATGTTGTTGATCAATTGAATGTTGCCCGAGCTAATTTTAGCAAGCTTTCTCTTCAACACAATAGCAAGCGGAATTCGTCTTGGTCCTTTCCAAACCCATCTTCCTCTGCTTCTCTAAGACCCTTTTCCCTTGTTTTTAATCTCCCCGCCTTCAATCAACCAAATCCAAACATACCGACGAGTGTTCTTGGTCGTCCTCAATTTTTCCCAAAATGGCCTCCAAAACCTTTTTCTTCTAAACCTCAATGCCAAATCTGTCACAAATTTGGTTATACCGCTCCTAACTGTCATCATCTTGCCTCTTTGGCCCACCAATCCATACCTCCTTAG

Protein sequence

MDDMDIQLDELIAILTAVYAATVTMMCHENTRMDKRMFTILFQLLRTMGGLRPIKYVDVEEMVAIFLHIVAHDVWLDNVQALQNIVLNAILRLYEDLLRKLEPVTKNCTDDRWRWFQNCLGAFDGTHIKVNVSAADRPRYRTRMGEIATNVLIVCNQSCEFIFVFTGWEGSVADSRVLRDVVSRPIGLKVPRGNPPTNLREIFNMIHSSAWNVIERAFGMLKGRWAILRGKSYYSKQLLNVVQANGLEGYLNGTVPVPSKYLDAQNMQLNLEFSTWEMYNSFIMCWIYSSFSEEKMGEIVSLDTAANIWNSLRSQYLSQIKEVADKFSAIGELISYRDHLAHILDSLGSEYNAFVTYIQNCSDNPSIEDVRSLLLAYEAPLEKQNVVDQLNVARANFSKLSLQHNSKRNSSWSFPNPSSSASLRPFSLVFNLPAFNQPNPNIPTSVLGRPQFFPKWPPKPFSSKPQCQICHKFGYTAPNCHHLASLAHQSIPP

Homology

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BLAST of ClCG05G015840 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 5.0e-49
Identity = 100/180 (55.56%), Postives = 129/180 (71.67%), Query Frame = 1


Query: 25  MMCHENTRMDKRMFTILFQLLRTMGGLRPIKYVDVEEMVAIFLHIVAHDVWL-------- 84
           ++C ++TRMD+R F IL  LLR + GL   + VDVEEMVA+FLH++AHDV          
Sbjct: 7   LVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQQEFV 66

Query: 85  ---DNVQALQNIVLNAILRLYEDLLRKLEPVTKNCTDDRWRWFQNCLGAFDGTHIKVNVS 144
              + V    NIVL A+LRLYE+L+++  PVT NC D RW+ F+NCLGA DGT+IKVNV 
Sbjct: 67  RSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVP 126

Query: 145 AADRPRYRTRMGEIATNVLIVCNQSCEFIFVFTGWEGSVADSRVLRDVVSRPIGLKVPRG 194
           A DRP +RTR GEIATNVL VC+   +F++V  GWEGS ADSR+LRD +S+  GL+VP+G
Sbjct: 127 AGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENGLQVPKG 186

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BLAST of ClCG05G015840 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.0e-10
Identity = 58/156 (37.18%), Postives = 79/156 (50.64%), Query Frame = 1


Query: 194 NPPTNLREIFNMIHSSAWNVIERAFGMLKGRWAILRGKSYYSKQ--------------LL 253
           N PTN +E FNM HSSA NVIERAFG+LKGRW ILRGKSYY  Q              L+
Sbjct: 220 NAPTNAKEYFNMKHSSARNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLI 279

Query: 254 N--VVQANGLEGYLNG--TVPVPSKYLDAQNMQLNLEFSTW--EMYNSFIMCWIYSSFSE 313
           N  +   N +E    G  T    +   D Q ++   E+S W  ++  S    W +     
Sbjct: 280 NREMTYCNDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLATSMFTDWQFRGGDS 339

Query: 314 EKMGEIVSLDTAANIWNSLRSQYLSQ-IKEVADKFS 329
             M E+VS+    +   + R  YL+Q ++ +A+K S
Sbjct: 340 CGM-ELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLS 374

HSP 2 Score: 203.0 bits (515), Expect = 8.5e-49
Identity = 105/187 (56.15%), Postives = 132/187 (70.59%), Query Frame = 1


Query: 18  VYAATVTMMCHENTRMDKRMFTILFQLLRTMGGLRPIKYVDVEEMVAIFLHIVAHDV--- 77
           +Y + V   C E  RMD+  FT L  +LRT+G L+  KY+DVEEMVA+FLHI+AH V   
Sbjct: 61  IYGSDVA--CMEQLRMDRHTFTTLCSMLRTIGKLKDSKYIDVEEMVALFLHILAHHVKNR 120

Query: 78  -----WLDNVQALQ---NIVLNAILRLYEDLLRKLEPVTKNCTDDRWRWFQNCLGAFDGT 137
                +L + + +    N VLNA++RL   LL+K EPV++N TD+RW+WF+NCLGA DGT
Sbjct: 121 VIKFRFLRSGETISRHFNAVLNAVIRLQGVLLKKPEPVSENSTDERWKWFKNCLGALDGT 180

Query: 138 HIKVNVSAADRPRYRTRMGEIATNVLIVCNQSCEFIFVFTGWEGSVADSRVLRDVVSRPI 194
           +IKVNV   D+PRYRTR  EIATNVL VC+Q  +FI+V  GWEGS +DSRVLRD VSR  
Sbjct: 181 YIKVNVREGDKPRYRTRKNEIATNVLGVCSQDMQFIYVLPGWEGSTSDSRVLRDAVSRRN 240

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BLAST of ClCG05G015840 vs. TrEMBL
Match: A5BND9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027369 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.9e-04
Identity = 26/42 (61.90%), Postives = 30/42 (71.43%), Query Frame = 1


Query: 193 GNPPTNLREIFNMIHSSAWNVIERAFGMLKGRWAILRGKSYY 235
           G+ PT   E FNM HS+A NVIER FG+LK RWAILR   +Y
Sbjct: 277 GHMPTTHEEFFNMKHSAARNVIERCFGLLKLRWAILRSPCFY 318

HSP 2 Score: 193.4 bits (490), Expect = 6.7e-46
Identity = 110/250 (44.00%), Postives = 155/250 (62.00%), Query Frame = 1


Query: 4   MDIQLDELIAILTAVYAATVTMMCHENTRMDKRMFTILFQLLRTMGGLRPIKYVDVEEMV 63
           M ++L ++I+ L  +   +  ++C +  RMD+  F  L  L + +GGL   KY+   E +
Sbjct: 59  MSVRLPKVISHLNCIINDS-DIVCIDKLRMDRNAFHNLVLLTKDVGGLTNGKYMSRSEKL 118

Query: 64  AIFLHIVAH-----DVWLD------NVQALQNIVLNAILRLYEDLLRKLEPVTKNCTDDR 123
           A+FL+I+AH      + +D      +V    N  L AIL+L    L   +P+ +N  +DR
Sbjct: 119 AMFLNILAHHEKNRSIKVDYIRSGWSVSQAFNECLRAILKLTPLFLVNPKPILENEIEDR 178

Query: 124 WRWFQNCLGAFDGTHIKVNVSAADRPRYRTRMGEIATNVLIVCNQSCEFIFVFTGWEGSV 183
           W+WF+ CLGA DGT+I + V +  +PRYRTR G+IATNVL VC+++  F +V  GWEG  
Sbjct: 179 WKWFKGCLGALDGTYIHIRVPSVYKPRYRTRKGDIATNVLGVCDRNLNFTYVLPGWEGLA 238

Query: 184 ADSRVLRDVVSRPIGLKVPRG-NPPTNLR-EIFNMIHSSAWNVIERAFGMLKGRWAILRG 241
           AD RVLRD V R  GLK+P G NP    R E+FNM H+ A +VIERAFG+LKGRW ILR 
Sbjct: 239 ADGRVLRDAVVRCNGLKIPEGDNPSPRCREELFNMKHARARDVIERAFGLLKGRWGILRS 298

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BLAST of ClCG05G015840 vs. TrEMBL
Match: A5AFK8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032219 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.1e-45
Identity = 98/176 (55.68%), Postives = 127/176 (72.16%), Query Frame = 1


Query: 29  ENTRMDKRMFTILFQLLRTMGGLRPIKYVDVEEMVAIFLHIVAHDV--------WLDNVQ 88
           E  RMD+  FT+L  +LRT+G L+  KYVDVEEMVA+FLHI+AH V        +L + +
Sbjct: 2   EQLRMDRHTFTMLCSMLRTIGKLKDSKYVDVEEMVALFLHILAHHVKNRVIKFRFLRSGE 61

Query: 89  ALQ---NIVLNAILRLYEDLLRKLEPVTKNCTDDRWRWFQNCLGAFDGTHIKVNVSAADR 148
            +    N VLNA++RL   LL+K EPV++N  D+RW+WF+NCLGA DGT+I+VNV    +
Sbjct: 62  TISRHFNAVLNAVIRLQGVLLKKPEPVSENSIDERWKWFKNCLGALDGTYIRVNVRERGK 121

Query: 149 PRYRTRMGEIATNVLIVCNQSCEFIFVFTGWEGSVADSRVLRDVVSRPIGLKVPRG 194
           PRYRT+  EIATNVL VC+Q  +FI+V +GW+GS +DSRVLRD VSR  GL VP G
Sbjct: 122 PRYRTKKNEIATNVLGVCSQDMQFIYVLSGWKGSTSDSRVLRDAVSRRNGLTVPHG 177

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BLAST of ClCG05G015840 vs. TrEMBL
Match: M5WDE8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014600mg PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 4.4e-45
Identity = 111/250 (44.40%), Postives = 146/250 (58.40%), Query Frame = 1


Query: 18  VYAATVTMMCHENTRMDKRMFTILFQLLRTMGGLRPIKYVDVEEMVAIFLHIVAHD---- 77
           VY +  T  C +  RMD++ F  L Q+L T G LR  + +  EEMVAIFL+I+AH     
Sbjct: 25  VYESDTT--CIDQLRMDRQSFHKLCQILVTKGELRSTRNMSTEEMVAIFLNILAHHHKNR 84

Query: 78  -VWLDNVQALQNI------VLNAILRLYEDLLRKLEPVTKNCTDDRWRWFQNCLGAFDGT 137
            +  +  ++ + +       L A++R  +D  +  EPV +N TD RW+WF+NCLGA DGT
Sbjct: 85  VIKFNFTRSGRTVSKYFHECLKAMIRCQKDFWKSPEPVPENSTDYRWKWFKNCLGALDGT 144

Query: 138 HIKVNVSAADRPRYRTRMGEIATNVLIVCNQSCEFIFVFTGWEGSVADSRVLRDVVS--- 197
           +I+V V   ++P+YRTR GEIATNVL VC+Q  +FI+V  GWEGS  DSRVL+D +S   
Sbjct: 145 YIRVKVPEREKPKYRTRKGEIATNVLGVCSQDLQFIYVLAGWEGSAHDSRVLKDALSYYY 204

Query: 198 -------RPIGLKVP------------RGNPPTNLREIFNMIHSSAWNVIERAFGMLKGR 235
                     G   P             G+ P    E FNM HSSA NVIER FG+LK R
Sbjct: 205 LVDAGYTNGTGFLAPFRGQRYHLNDWRDGHRPETPNEFFNMKHSSARNVIERCFGLLKMR 264

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BLAST of ClCG05G015840 vs. TAIR10
Match: AT5G41980.1 (AT5G41980.1 Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 99.8 bits (247), Expect = 5.1e-21
Identity = 81/262 (30.92%), Postives = 113/262 (43.13%), Query Frame = 1


Query: 27  CHENTRMDKRMFTILFQLLRTMGGLRPIKYVDVEEMVAIFLHIVAHDVWLDNVQALQ--- 86
           C EN RMDK +F  L  LL+T G LR    + +E  +AIFL I+ H++    VQ L    
Sbjct: 42  CFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYS 101

Query: 87  --------NIVLNAILRLYEDLLRKLEPVTKNCTDDRWRWFQNCLGAFDGTHIKVNVSAA 146
                   N VLNA++ + +D  +          DD +  F++C+G  D  HI V V   
Sbjct: 102 GETISRHFNNVLNAVIAISKDFFQPNSNSDTLENDDPY--FKDCVGVVDSFHIPVMVGVD 161

Query: 147 DRPRYRTRMGEIATNVLIVCNQSCEFIFVFTGWEGSVADSRVLRDVVSRPIGLKVPRG-- 206
           ++  +R   G +  NVL   +    F +V  GWEGS +D +VL   ++R   L+VP+G  
Sbjct: 162 EQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRRNKLQVPQGKY 221

Query: 207 ----NPPTNLREIFNMIHSSAWN------------------VIERAFGMLKGRWAILRGK 252
               N   NL       H  + N                   I R FG LK R+ IL   
Sbjct: 222 YIVDNKYPNLPGFIAPYHGVSTNSREEAKEMFNERHKLLHRAIHRTFGALKERFPILLSA 281

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BLAST of ClCG05G015840 vs. TAIR10
Match: AT5G28950.1 (AT5G28950.1 unknown protein)

HSP 1 Score: 75.9 bits (185), Expect = 7.9e-14
Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 1


Query: 115 WFQNCLGAFDGTHIKVNVSAADRPRYRTRMGEIATNVLIVCNQSCEFIFVFTGWEGSVAD 174
           +F++C+GA D THI   VS    P +R R G+I+ N+L  CN   EF++V +GWEGS  D
Sbjct: 21  YFKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSAHD 80

Query: 175 SRVLRDVVSR 185
           S+VL D ++R
Sbjct: 81  SKVLNDALTR 90

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BLAST of ClCG05G015840 vs. TAIR10
Match: AT5G35695.1 (AT5G35695.1 Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 53.1 bits (126), Expect = 5.5e-07
Identity = 40/116 (34.48%), Postives = 50/116 (43.10%), Query Frame = 1


Query: 161 FIFVFTGWEGSVADSRVLRDVVSR----------PIGLKVP-RG------------NPPT 220
           FI+V +GWEGS  DSRVL D + +           +    P RG              P 
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRKFYLVDCGFANRLNFLAPFRGVRYHLQEFAGQRRDPE 84

Query: 221 NLREIFNMIHSSAWNVIERAFGMLKGRWAILRGKS--YYSKQLLNVVQANGLEGYL 252
              E+FN+ H S  NVIER FG+ K R+AI +      Y KQ   V+    L  +L
Sbjct: 85  TPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCAALHNFL 140

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BLAST of ClCG05G015840 vs. NCBI nr
Match: gi|659086609|ref|XP_008444024.1| (PREDICTED: uncharacterized protein LOC103487473 [Cucumis melo])

HSP 1 Score: 234.2 bits (596), Expect = 4.9e-58
Identity = 122/218 (55.96%), Postives = 149/218 (68.35%), Query Frame = 1


Query: 33  MDKRMFTILFQLLRTMGGLRPIKYVDVEEMVAIFLHIVAHDVWLDNVQALQ--------- 92
           MD+R F IL  LLRT   L   ++VDVEEMVA+FLH++AHDV    +Q            
Sbjct: 1   MDRRCFLILCHLLRTRADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQ 60

Query: 93  --NIVLNAILRLYEDLLRKLEPVTKNCTDDRWRWFQNCLGAFDGTHIKVNVSAADRPRYR 152
             N+VL A+LRL+++LL   +P+T  C D RW  F+NC+GA D  +IKVNVSA DRPRYR
Sbjct: 61  HFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFENCIGALDDMYIKVNVSAVDRPRYR 120

Query: 153 TRMGEIATNVLIVCNQSCEFIFVFTGWEGSVADSRVLRDVVSRPIGLKVPR-----GNPP 212
           TR GE+ATN L VC+   +F+F+  GWEGS A+SR LRD +SRP GLKV +     GN P
Sbjct: 121 TRKGEVATNFLGVCDTKGDFVFILAGWEGSAANSRNLRDALSRPNGLKVLKEWRGTGNAP 180

Query: 213 TNLREIFNMIHSSAWNVIERAFGMLKGRWAILRGKSYY 235
              +E FNM HSSAWNVIERA G+LKG WAILR KSYY
Sbjct: 181 ETPKEFFNMKHSSAWNVIERASGLLKGCWAILREKSYY 218

[Close]

BLAST of ClCG05G015840 vs. NCBI nr
Match: gi|659126152|ref|XP_008463037.1| (PREDICTED: uncharacterized protein LOC103501276 [Cucumis melo])

HSP 1 Score: 205.3 bits (521), Expect = 2.5e-49
Identity = 102/161 (63.35%), Postives = 123/161 (76.40%), Query Frame = 1


Query: 44  LLRTMGGLRPIKYVDVEEMVAIFLHIVAHDVWL-----------DNVQALQNIVLNAILR 103
           +LRT GGL   +YVDVEEMVAI LHIVAHDV             + V    N+VLNA+LR
Sbjct: 1   MLRTRGGLEATQYVDVEEMVAILLHIVAHDVKNKVARRYFARSDETVSRHLNVVLNAVLR 60

Query: 104 LYEDLLRKLEPVTKNCTDDRWRWFQNCLGAFDGTHIKVNVSAADRPRYRTRMGEIATNVL 163
           L+E LL++ +PVT +C+ ++WRWFQNCLGA DGTHIKVNVS +D PRYR+R G+I TNVL
Sbjct: 61  LHEILLKQPDPVTHSCSHEKWRWFQNCLGALDGTHIKVNVSMSDHPRYRSRKGDITTNVL 120

Query: 164 IVCNQSCEFIFVFTGWEGSVADSRVLRDVVSRPIGLKVPRG 194
            VC+Q+ E+IFV  GWEGS +DSRVLRDVVSRP GLKVP+G
Sbjct: 121 GVCSQNGEYIFVMPGWEGSASDSRVLRDVVSRPTGLKVPKG 161

[Close]

BLAST of ClCG05G015840 vs. NCBI nr
Match: gi|307135889|gb|ADN33754.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 203.8 bits (517), Expect = 7.1e-49
Identity = 100/180 (55.56%), Postives = 129/180 (71.67%), Query Frame = 1


Query: 25  MMCHENTRMDKRMFTILFQLLRTMGGLRPIKYVDVEEMVAIFLHIVAHDVWL-------- 84
           ++C ++TRMD+R F IL  LLR + GL   + VDVEEMVA+FLH++AHDV          
Sbjct: 7   LVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQQEFV 66

Query: 85  ---DNVQALQNIVLNAILRLYEDLLRKLEPVTKNCTDDRWRWFQNCLGAFDGTHIKVNVS 144
              + V    NIVL A+LRLYE+L+++  PVT NC D RW+ F+NCLGA DGT+IKVNV 
Sbjct: 67  RSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVP 126

Query: 145 AADRPRYRTRMGEIATNVLIVCNQSCEFIFVFTGWEGSVADSRVLRDVVSRPIGLKVPRG 194
           A DRP +RTR GEIATNVL VC+   +F++V  GWEGS ADSR+LRD +S+  GL+VP+G
Sbjct: 127 AGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENGLQVPKG 186

[Close]

BLAST of ClCG05G015840 vs. NCBI nr
Match: gi|307135889|gb|ADN33754.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 75.5 bits (184), Expect = 2.9e-10
Identity = 58/156 (37.18%), Postives = 79/156 (50.64%), Query Frame = 1


Query: 194 NPPTNLREIFNMIHSSAWNVIERAFGMLKGRWAILRGKSYYSKQ--------------LL 253
           N PTN +E FNM HSSA NVIERAFG+LKGRW ILRGKSYY  Q              L+
Sbjct: 220 NAPTNAKEYFNMKHSSARNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLI 279

Query: 254 N--VVQANGLEGYLNG--TVPVPSKYLDAQNMQLNLEFSTW--EMYNSFIMCWIYSSFSE 313
           N  +   N +E    G  T    +   D Q ++   E+S W  ++  S    W +     
Sbjct: 280 NREMTYCNDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLATSMFTDWQFRGGDS 339

Query: 314 EKMGEIVSLDTAANIWNSLRSQYLSQ-IKEVADKFS 329
             M E+VS+    +   + R  YL+Q ++ +A+K S
Sbjct: 340 CGM-ELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLS 374

HSP 2 Score: 203.0 bits (515), Expect = 1.2e-48
Identity = 105/187 (56.15%), Postives = 132/187 (70.59%), Query Frame = 1


Query: 18  VYAATVTMMCHENTRMDKRMFTILFQLLRTMGGLRPIKYVDVEEMVAIFLHIVAHDV--- 77
           +Y + V   C E  RMD+  FT L  +LRT+G L+  KY+DVEEMVA+FLHI+AH V   
Sbjct: 61  IYGSDVA--CMEQLRMDRHTFTTLCSMLRTIGKLKDSKYIDVEEMVALFLHILAHHVKNR 120

Query: 78  -----WLDNVQALQ---NIVLNAILRLYEDLLRKLEPVTKNCTDDRWRWFQNCLGAFDGT 137
                +L + + +    N VLNA++RL   LL+K EPV++N TD+RW+WF+NCLGA DGT
Sbjct: 121 VIKFRFLRSGETISRHFNAVLNAVIRLQGVLLKKPEPVSENSTDERWKWFKNCLGALDGT 180

Query: 138 HIKVNVSAADRPRYRTRMGEIATNVLIVCNQSCEFIFVFTGWEGSVADSRVLRDVVSRPI 194
           +IKVNV   D+PRYRTR  EIATNVL VC+Q  +FI+V  GWEGS +DSRVLRD VSR  
Sbjct: 181 YIKVNVREGDKPRYRTRKNEIATNVLGVCSQDMQFIYVLPGWEGSTSDSRVLRDAVSRRN 240

[Close]

BLAST of ClCG05G015840 vs. NCBI nr
Match: gi|147779878|emb|CAN65842.1| (hypothetical protein VITISV_027369 [Vitis vinifera])

HSP 1 Score: 55.1 bits (131), Expect = 4.1e-04
Identity = 26/42 (61.90%), Postives = 30/42 (71.43%), Query Frame = 1


Query: 193 GNPPTNLREIFNMIHSSAWNVIERAFGMLKGRWAILRGKSYY 235
           G+ PT   E FNM HS+A NVIER FG+LK RWAILR   +Y
Sbjct: 277 GHMPTTHEEFFNMKHSAARNVIERCFGLLKLRWAILRSPCFY 318

HSP 2 Score: 201.8 bits (512), Expect = 2.7e-48
Identity = 102/172 (59.30%), Postives = 124/172 (72.09%), Query Frame = 1


Query: 33  MDKRMFTILFQLLRTMGGLRPIKYVDVEEMVAIFLHIVAHDVWL-----------DNVQA 92
           MD+R F IL  LLRT  GL   + +DVEEMVA+FLHI+AHDV             + V  
Sbjct: 1   MDRRCFAILCHLLRTTAGLVETEVIDVEEMVAMFLHILAHDVKNRMIQREFVRSGETVSR 60

Query: 93  LQNIVLNAILRLYEDLLRKLEPVTKNCTDDRWRWFQNCLGAFDGTHIKVNVSAADRPRYR 152
             NIVL A  RL+++LL+K +PVT +CTD RW+WF+NCLGA DGT+IKVNVSA DRPRYR
Sbjct: 61  HFNIVLLAGFRLHDELLKKPQPVTNSCTDPRWKWFENCLGALDGTYIKVNVSATDRPRYR 120

Query: 153 TRMGEIATNVLIVCNQSCEFIFVFTGWEGSVADSRVLRDVVSRPIGLKVPRG 194
           TR GE+ATNVL  C+   +F+FV  GWEGS ADSR+LRD +SR  GLKVP+G
Sbjct: 121 TRKGEVATNVLGACDTKGDFVFVLFGWEGSAADSRILRDAISRHNGLKVPKG 172

The following BLAST results are available for this feature:

BLAST of ClCG05G015840 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GBB2_CUCME	5.0e-49	55.56	Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
E5GBB2_CUCME	2.0e-10	37.18	Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A5BND9_VITVI	2.9e-04	61.90	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027369 PE=4 SV=1	[more]
A5AFK8_VITVI	1.1e-45	55.68	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032219 PE=4 SV=1	[more]
M5WDE8_PRUPE	4.4e-45	44.40	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014600mg PE=4 SV=1	[more]

BLAST of ClCG05G015840 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41980.1	5.1e-21	30.92	Putative harbinger transposase-derived nuclease (InterPro:IPR006912)	[more]
AT5G28950.1	7.9e-14	47.14	unknown protein	[more]
AT5G35695.1	5.5e-07	34.48	Putative harbinger transposase-derived nuclease (InterPro:IPR006912)	[more]

BLAST of ClCG05G015840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659086609\|ref\|XP_008444024.1\|	4.9e-58	55.96	PREDICTED: uncharacterized protein LOC103487473 [Cucumis melo]	[more]
gi\|659126152\|ref\|XP_008463037.1\|	2.5e-49	63.35	PREDICTED: uncharacterized protein LOC103501276 [Cucumis melo]	[more]
gi\|307135889\|gb\|ADN33754.1\|	7.1e-49	55.56	retrotransposon protein [Cucumis melo subsp. melo]	[more]
gi\|307135889\|gb\|ADN33754.1\|	2.9e-10	37.18	retrotransposon protein [Cucumis melo subsp. melo]	[more]
gi\|147779878\|emb\|CAN65842.1\|	4.1e-04	61.90	hypothetical protein VITISV_027369 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027806	HARBI1_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G015840.1	ClCG05G015840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 191..236 score: 2.6E-6coord: 124..180 score: 2.
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 25..244 score: 7.5
None	No IPR available	PANTHER	PTHR22930:SF27	SUBFAMILY NOT NAMED	coord: 25..244 score: 7.5
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 315..379 score: 5.

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G015840	Silver-seed gourd	carwcgB0613
ClCG05G015840	Silver-seed gourd	carwcgB0749
ClCG05G015840	Cucumber (Chinese Long) v3	cucwcgB325
ClCG05G015840	Watermelon (97103) v2	wcgwmbB229
ClCG05G015840	Wax gourd	wcgwgoB480
ClCG05G015840	Cucumber (Gy14) v1	cgywcgB470
ClCG05G015840	Cucurbita maxima (Rimu)	cmawcgB022
ClCG05G015840	Cucurbita maxima (Rimu)	cmawcgB412
ClCG05G015840	Cucurbita moschata (Rifu)	cmowcgB016
ClCG05G015840	Cucurbita moschata (Rifu)	cmowcgB413
ClCG05G015840	Wild cucumber (PI 183967)	cpiwcgB326
ClCG05G015840	Cucumber (Chinese Long) v2	cuwcgB309
ClCG05G015840	Melon (DHL92) v3.5.1	mewcgB479
ClCG05G015840	Watermelon (97103) v1	wcgwmB285
ClCG05G015840	Cucurbita pepo (Zucchini)	cpewcgB510
ClCG05G015840	Cucurbita pepo (Zucchini)	cpewcgB701
ClCG05G015840	Bottle gourd (USVL1VR-Ls)	lsiwcgB288
ClCG05G015840	Cucumber (Gy14) v2	cgybwcgB289
ClCG05G015840	Melon (DHL92) v3.6.1	medwcgB473