ClCG05G014660 (gene) Watermelon (Charleston Gray)

Overview
NameClCG05G014660
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRetrotransposon like protein
LocationCG_Chr05 : 25014051 .. 25014550 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAACGCCATGTCTACCGGAAGCACCAATGGTCCTGAATCTACGAAATTTAACAATCCACCACTGAATCAACTTCTTTATCAAATTACAAATACAAAGCTCGAGCAAGGAAATTATCTACTATGGAAGACGTTTGCCCTACCCATACTTCAAAGCTACAAACTCGAAGGTCATCTCTCTGATAAGAACCCCTGCCCTCCAATGTTTCTTCCCATCCTTGGTGATAGCTCGACACTAGTAGCAACCAATGCTGAAGGAGCTTCAAGTTCCCAAATGATTTCTAAAGTTGTTGTTAGTACCTCTATTGAAATAAGCTTAAATCCACATTTGAGGCATGGATTTTTGAAGATTAGCTTCTCTTAGGCTGGTTGTACAACTCAATGATGCTAGAAGTGGCTATACAACTCATGGGTTTTAATAATATGAAAGAACTTTGGGAAGCTATTCAGGAACTTTTTGGCATTCAATTGAGGGCTGAGGAAGATTATCTACGATAG

mRNA sequence

ATGACCAACGCCATGTCTACCGGAAGCACCAATGGTCCTGAATCTACGAAATTTAACAATCCACCACTGAATCAACTTCTTTATCAAATTACAAATACAAAGCTCGAGCAAGGAAATTATCTACTATGGAAGACGTTTGCCCTACCCATACTTCAAAGCTACAAACTCGAAGGTCATCTCTCTGATAAGAACCCCTGCCCTCCAATGTTTCTTCCCATCCTTGGTGATAGCTCGACACTAGTAGCAACCAATGCTGAAGGAGCTTCAAGTTCCCAAATGATTTCTAAAGTTGTTGTTAGCTGGTTGTACAACTCAATGATGCTAGAAGTGGCTATACAACTCATGGGTTTTAATAATATGAAAGAACTTTGGGAAGCTATTCAGGAACTTTTTGGCATTCAATTGAGGGCTGAGGAAGATTATCTACGATAG

Coding sequence (CDS)

ATGACCAACGCCATGTCTACCGGAAGCACCAATGGTCCTGAATCTACGAAATTTAACAATCCACCACTGAATCAACTTCTTTATCAAATTACAAATACAAAGCTCGAGCAAGGAAATTATCTACTATGGAAGACGTTTGCCCTACCCATACTTCAAAGCTACAAACTCGAAGGTCATCTCTCTGATAAGAACCCCTGCCCTCCAATGTTTCTTCCCATCCTTGGTGATAGCTCGACACTAGTAGCAACCAATGCTGAAGGAGCTTCAAGTTCCCAAATGATTTCTAAAGTTGTTGTTAGCTGGTTGTACAACTCAATGATGCTAGAAGTGGCTATACAACTCATGGGTTTTAATAATATGAAAGAACTTTGGGAAGCTATTCAGGAACTTTTTGGCATTCAATTGAGGGCTGAGGAAGATTATCTACGATAG

Protein sequence

MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGASSSQMISKVVVSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR
Homology
[Close]
BLAST of ClCG05G014660 vs. TrEMBL
Match: V7CEQ5_PHAVU (Uncharacterized protein (Fragment) OS=Phaseolus vulgaris GN=PHAVU_002G005200g PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.0e-15
Identity = 45/112 (40.18%), Postives = 69/112 (61.61%), Query Frame = 1 

Query: 34  KLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGASSSQM 93
           KL+  NYLLW+T  LPI++ +KL+GH+    PCPP FLP     ST+   N E     + 
Sbjct: 22  KLDHTNYLLWETTILPIIRGHKLDGHVFGNKPCPPEFLPRTTPGSTVKIPNPE---FEEW 81

Query: 94  IS--KVVVSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR 144
           +S  ++++ WLY++M  ++A QLM  + +KELW+A +EL G   R+   Y +
Sbjct: 82  VSNHQLLLGWLYSTMRTDIASQLMRNSTLKELWDAAKELSGAHTRSRIVYYK 130

[Close]
BLAST of ClCG05G014660 vs. TrEMBL
Match: A0A151RKJ3_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_035512 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.3e-09
Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 1 

Query: 1   MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHL 60
           M N+ S+ S+N           L  +L    + KL++ NY LWK+  LP L+ + L+G+L
Sbjct: 1   MANSNSSSSSN-----------LKNILSIPCSVKLDRKNYRLWKSLVLPSLKGHNLDGYL 60

Query: 61  SDKNPCPPMFLPILGDSSTLVATNAEGASSSQMISKVVVSWLYNSMMLEVAIQLMGFNNM 120
                CPP F+ I           A+  S+ Q++    + WL NSM  EVA QL+     
Sbjct: 61  FGTTKCPPEFI-IDETGKKNNPAFADWTSTDQLL----LGWLINSMTQEVATQLLHCETS 120

Query: 121 KELWEAIQELFGIQLRAEEDYLR 144
           +++WE  Q L G   R+   +L+
Sbjct: 121 QQIWEDAQSLAGAHTRSRITFLK 127

[Close]
BLAST of ClCG05G014660 vs. TrEMBL
Match: A0A151QNK8_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_047566 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.3e-09
Identity = 41/119 (34.45%), Postives = 61/119 (51.26%), Query Frame = 1 

Query: 27  LYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAE 86
           L  I + KL++ NY LWK+  + I++  +L+GH+     CP  F+    DSS       E
Sbjct: 13  LPSIVSVKLDRDNYPLWKSLVISIVKGCRLDGHMLGTKECPEEFIAS-ADSSKKPNPAFE 72

Query: 87  G--ASSSQMISKVVVSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR 144
              A  SQ++      WL NSM +E+A QL+     K+LW+  Q L G   R+   YL+
Sbjct: 73  NWQAHDSQLLG-----WLMNSMTIEMATQLLHCETSKQLWDEAQSLAGAHTRSRVTYLK 125

[Close]
BLAST of ClCG05G014660 vs. TrEMBL
Match: A0A0A0K3F9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G091720 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-07
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 1 

Query: 106 MMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR 144
           M  EVA+QLMGFN  K+LWEAIQ+LFG+QLRAEED+LR
Sbjct: 1   MTPEVALQLMGFNTAKDLWEAIQDLFGVQLRAEEDFLR 38

[Close]
BLAST of ClCG05G014660 vs. TrEMBL
Match: A0A151R6N1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_040630 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.0e-07
Identity = 40/133 (30.08%), Postives = 63/133 (47.37%), Query Frame = 1 

Query: 11  NGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMF 70
           N   S+  N   +  + Y I   KL++GNY LWK+  LP L+ + L+G++      P  F
Sbjct: 3   NSDSSSSSNLKNILSIPYSI---KLDRGNYRLWKSLVLPSLRGHNLDGYIFGTTKYPQEF 62

Query: 71  LPILGDSSTLVATNAEGASSSQMISKVVVSWLYNSMMLEVAIQLMGFNNMKELWEAIQEL 130
           + I         T     S+ Q++    + WL NSM  EV  QL+ +   +++WE  Q L
Sbjct: 63  I-IDETGKKNTPTFVYWTSTDQLL----LGWLINSMTQEVTTQLLHYETSQQIWEDAQSL 122

Query: 131 FGIQLRAEEDYLR 144
            G   R    +L+
Sbjct: 123 AGAHTRLRITFLK 127

[Close]
BLAST of ClCG05G014660 vs. NCBI nr
Match: gi|593787208|ref|XP_007156643.1| (hypothetical protein PHAVU_002G005200g, partial [Phaseolus vulgaris])

HSP 1 Score: 89.4 bits (220), Expect = 5.7e-15
Identity = 45/112 (40.18%), Postives = 69/112 (61.61%), Query Frame = 1 

Query: 34  KLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGASSSQM 93
           KL+  NYLLW+T  LPI++ +KL+GH+    PCPP FLP     ST+   N E     + 
Sbjct: 22  KLDHTNYLLWETTILPIIRGHKLDGHVFGNKPCPPEFLPRTTPGSTVKIPNPE---FEEW 81

Query: 94  IS--KVVVSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR 144
           +S  ++++ WLY++M  ++A QLM  + +KELW+A +EL G   R+   Y +
Sbjct: 82  VSNHQLLLGWLYSTMRTDIASQLMRNSTLKELWDAAKELSGAHTRSRIVYYK 130

[Close]
BLAST of ClCG05G014660 vs. NCBI nr
Match: gi|828332633|ref|XP_004513130.2| (PREDICTED: uncharacterized protein LOC101488260, partial [Cicer arietinum])

HSP 1 Score: 70.5 bits (171), Expect = 2.7e-09
Identity = 36/114 (31.58%), Postives = 60/114 (52.63%), Query Frame = 1 

Query: 32  NTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGASSS 91
           + KL++ NYLLWK+  LP+++  KL+G++     CP  F+      ST   T        
Sbjct: 22  SVKLDRDNYLLWKSLVLPLIRGCKLDGYIIGTKECPEQFI------STNDTTKKNNPDYE 81

Query: 92  QMIS--KVVVSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR 144
           + I+  + ++ WL NS+ +++A QL+     KELW   Q L G   ++   YL+
Sbjct: 82  EWIAHDQALLGWLRNSVAIDIATQLLHCETSKELWNEAQSLTGAHTKSRTIYLK 129

[Close]
BLAST of ClCG05G014660 vs. NCBI nr
Match: gi|828335907|ref|XP_012575528.1| (PREDICTED: uncharacterized protein LOC105853050 [Cicer arietinum])

HSP 1 Score: 69.7 bits (169), Expect = 4.7e-09
Identity = 38/113 (33.63%), Postives = 58/113 (51.33%), Query Frame = 1 

Query: 32  NTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGASSS 91
           + KL++ NY LWK+  + I++ Y+L+GH+     CP  F+     +ST    N   A   
Sbjct: 18  SVKLDRDNYPLWKSLVISIVKGYRLDGHMLGTKECPEKFI-----ASTDSIKNPNPAFED 77

Query: 92  -QMISKVVVSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR 144
            Q     ++ WL NSM  E+A QL+     K+LW+  Q L G   R+   YL+
Sbjct: 78  WQAHDSQLLGWLMNSMTTEMATQLLHCETSKQLWDEAQSLAGAHTRSRVTYLK 125

[Close]
BLAST of ClCG05G014660 vs. NCBI nr
Match: gi|1012331601|gb|KYP43069.1| (hypothetical protein KK1_035512 [Cajanus cajan])

HSP 1 Score: 69.3 bits (168), Expect = 6.1e-09
Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 1 

Query: 1   MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHL 60
           M N+ S+ S+N           L  +L    + KL++ NY LWK+  LP L+ + L+G+L
Sbjct: 1   MANSNSSSSSN-----------LKNILSIPCSVKLDRKNYRLWKSLVLPSLKGHNLDGYL 60

Query: 61  SDKNPCPPMFLPILGDSSTLVATNAEGASSSQMISKVVVSWLYNSMMLEVAIQLMGFNNM 120
                CPP F+ I           A+  S+ Q++    + WL NSM  EVA QL+     
Sbjct: 61  FGTTKCPPEFI-IDETGKKNNPAFADWTSTDQLL----LGWLINSMTQEVATQLLHCETS 120

Query: 121 KELWEAIQELFGIQLRAEEDYLR 144
           +++WE  Q L G   R+   +L+
Sbjct: 121 QQIWEDAQSLAGAHTRSRITFLK 127

[Close]
BLAST of ClCG05G014660 vs. NCBI nr
Match: gi|1012318520|gb|KYP31890.1| (hypothetical protein KK1_047566 [Cajanus cajan])

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-08
Identity = 41/119 (34.45%), Postives = 61/119 (51.26%), Query Frame = 1 

Query: 27  LYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAE 86
           L  I + KL++ NY LWK+  + I++  +L+GH+     CP  F+    DSS       E
Sbjct: 13  LPSIVSVKLDRDNYPLWKSLVISIVKGCRLDGHMLGTKECPEEFIAS-ADSSKKPNPAFE 72

Query: 87  G--ASSSQMISKVVVSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR 144
              A  SQ++      WL NSM +E+A QL+     K+LW+  Q L G   R+   YL+
Sbjct: 73  NWQAHDSQLLG-----WLMNSMTIEMATQLLHCETSKQLWDEAQSLAGAHTRSRVTYLK 125

The following BLAST results are available for this feature:
BLAST of ClCG05G014660 vs. TrEMBL
Match NameE-valueIdentityDescription
V7CEQ5_PHAVU4.0e-1540.18Uncharacterized protein (Fragment) OS=Phaseolus vulgaris GN=PHAVU_002G005200g PE... [more]
A0A151RKJ3_CAJCA4.3e-0931.47Uncharacterized protein OS=Cajanus cajan GN=KK1_035512 PE=4 SV=1[more]
A0A151QNK8_CAJCA7.3e-0934.45Uncharacterized protein OS=Cajanus cajan GN=KK1_047566 PE=4 SV=1[more]
A0A0A0K3F9_CUCSA1.8e-0776.32Uncharacterized protein OS=Cucumis sativus GN=Csa_7G091720 PE=4 SV=1[more]
A0A151R6N1_CAJCA4.0e-0730.08Uncharacterized protein OS=Cajanus cajan GN=KK1_040630 PE=4 SV=1[more]
BLAST of ClCG05G014660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|593787208|ref|XP_007156643.1|5.7e-1540.18hypothetical protein PHAVU_002G005200g, partial [Phaseolus vulgaris][more]
gi|828332633|ref|XP_004513130.2|2.7e-0931.58PREDICTED: uncharacterized protein LOC101488260, partial [Cicer arietinum][more]
gi|828335907|ref|XP_012575528.1|4.7e-0933.63PREDICTED: uncharacterized protein LOC105853050 [Cicer arietinum][more]
gi|1012331601|gb|KYP43069.1|6.1e-0931.47hypothetical protein KK1_035512 [Cajanus cajan][more]
gi|1012318520|gb|KYP31890.1|1.0e-0834.45hypothetical protein KK1_047566 [Cajanus cajan][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G014660.1ClCG05G014660.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G014660Cucumber (Chinese Long) v3cucwcgB231
ClCG05G014660Cucumber (Chinese Long) v3cucwcgB242
ClCG05G014660Watermelon (97103) v2wcgwmbB219
ClCG05G014660Watermelon (97103) v2wcgwmbB226
ClCG05G014660Watermelon (97103) v2wcgwmbB229
ClCG05G014660Wax gourdwcgwgoB473
ClCG05G014660Watermelon (Charleston Gray)wcgwcgB053
ClCG05G014660Watermelon (Charleston Gray)wcgwcgB142
ClCG05G014660Cucumber (Gy14) v1cgywcgB466
ClCG05G014660Cucurbita maxima (Rimu)cmawcgB025
ClCG05G014660Cucurbita maxima (Rimu)cmawcgB298
ClCG05G014660Cucurbita maxima (Rimu)cmawcgB408
ClCG05G014660Cucurbita moschata (Rifu)cmowcgB019
ClCG05G014660Cucurbita moschata (Rifu)cmowcgB407
ClCG05G014660Wild cucumber (PI 183967)cpiwcgB232
ClCG05G014660Wild cucumber (PI 183967)cpiwcgB242
ClCG05G014660Cucumber (Chinese Long) v2cuwcgB228
ClCG05G014660Cucumber (Chinese Long) v2cuwcgB234
ClCG05G014660Melon (DHL92) v3.5.1mewcgB334
ClCG05G014660Melon (DHL92) v3.5.1mewcgB338
ClCG05G014660Watermelon (97103) v1wcgwmB285
ClCG05G014660Cucurbita pepo (Zucchini)cpewcgB519
ClCG05G014660Cucurbita pepo (Zucchini)cpewcgB704
ClCG05G014660Bottle gourd (USVL1VR-Ls)lsiwcgB285
ClCG05G014660Cucumber (Gy14) v2cgybwcgB210
ClCG05G014660Cucumber (Gy14) v2cgybwcgB218
ClCG05G014660Melon (DHL92) v3.6.1medwcgB149
ClCG05G014660Melon (DHL92) v3.6.1medwcgB328
ClCG05G014660Melon (DHL92) v3.6.1medwcgB332
ClCG05G014660Silver-seed gourdcarwcgB0035
ClCG05G014660Silver-seed gourdcarwcgB0885
ClCG05G014660Silver-seed gourdcarwcgB0998