ClCG05G013830 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGGCTTGAAAGTAAGTTGTTCTTATGCTTCCATTCCACACAAAATTTCAGATGCATATAGATTTGTGTCCCTGTTTTCATCCCATTTTGCAATTGATCCATAGATGCCAAAAAAGAAATCCAAAAACAGACAGGATCTGTTTTGAAGGACTTGAACCAACAAAATCCATCCACGAATAACCGTCAGCGTAGACCAGGGATTCTTGGGTATAATCACTTACATGCTATATTATTAACAAAGTTTTGTGTCTTTTTTTTGAAGCGTCACGTTTTCTTGTGGTCGAGAATAAAAAAATCTTCTTGTGCATGTAGGAGATCTGTTAGATACAAGCATCAATATTCATCAATAACAACTGAAGATGATCAGAATGTAGATCCTTCTCAAGTGACATTTGAATCAGATAGCATCAGTCCATTGATTTTGGGCACAGAAACACACCCAAGTCCACATATAATTGACTCAGAAAAGAAAACTGATGAAGACGTAGCCTTTGAGGAGGAGGAGGAGGAGGAGTTCGTTGGTAAGTAATTTATAATAGAGATATAAATGCAACTTAATGCATGCATTATGGTCCAGTTGATTTTATCTTTCTCACATTCTGCTGTCCTCTTCCTCTCTTCTTTTTCGTTTCGTACTATCCCTGTTAAAGCTAAAGGTAGTTCGTATGAACCTCTTTGATGCTGTGATCTTTTTTTTTTCCCTAAGTTTCAGTTACCAAGGCAGAGAACAAAGTGAATAAAATTTTGGGTGAATTACTCTCTGCCAATTGTGAAGATCTAGAAGGTGATCGAGCCATCAACATATTACAGGAGCGCTTGCAGATTAAACCCATTAATTTAGAGAAATTATGTCTTCCAGATTTGGAAGCCATTCCGACAATGAATTTGAAATCTTCAAGTCGCAATCTTTCAAAGCGTAGTTTGATCAGTGTGGACAATCATTTACAAAGGACAGAAACTTTGAAATCTAAGCAGGACGATGAAACTTTGGTTAATCCTGTTTCTACACCATCCTCAATCAGAAGCCCATTGGGCTCATTATCAGCCTTAAATAGACGAATTTCACTTTCAAATTCATCAGGTGATCCATTTTCTGCTCATGGAATTGACCAATCTCCAGCAAGAGGTCCTTACCTTTTTGAACTCAGTAATCACTTGTCTGATGCAGTTGGTATTGCAGAGCAGTCAAGTGTTTCTAAATTGAAGTCACTTTTAACCAAAGACGGCGGGACTGTAGCAAATGGAATTAAGTCATCCAAAATTCTTTTTGGAGATGCTGATTCCATGTCTAAAATATCTTCAAGTAGTGTTTTAAATGTACCCCAAGTTGGTGGCGATACTGCCTTAAGTGGAACTCACGCCAGCATGGAAGCTAAAGATGATAGTGGCAGCACAGAAGTGGAAGTAAATGAGAAATTCAGTTGTCTTGAAGCCCAAGCAGATGTTGTGGCTAATATGCGGATGGAAGATCTCGAAGGATCAGCTTCCGAGCAACCAAACTCATCCATGGTGGACGTGATCAAAGAGTACCCAGTTGGCACTCAGGGTCAGTTGGGTATGATCTTCAACCCCAGTATCGTTAGTTACTAGCTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTATTTTTTATTTAATGTGTTAGGATAGTTTTAGTTTGGGTTGGGCTTCACATTTGCAGAAGTATGGGTTTAAAAAGAGTTAAATGATTCGAATAAGCGGTGGTGGGAATAGAAATTGTCTTAAAGTGATGGGTTGCAATAATTTCAGGGAAAACCGAGATTGGGGAAGCTTACTACCCGAATTGTTCTTGTCCTTGACTGTGAGTGATACTTTCTTTAAAAATAAACCTTTACGCTGTTTTATCTAATTTTATGGGCATGACTTGCTTTTAACATATTTAGAATGTGGTTTCATAATAACTGTATTCTATCACTGATTTTACGAGTATTTATGGTATGTCTAATATGTTGTGTAGTTTTGAAAATTTATGTTAAAATATGTTTAGCGTGGATTTATTTTTGAGAATATTTATGTTATATTTATTTCAGAAACCCTGTTTTAGCTATGGATTTCACGGGAAGATTTGGTGTGGAATGTTATTCATAAATGTTTATGGAAATGATGGATTATGATAATTTATGATAGTTTGTGTGAAAGTGGTTTTCAAACCATTGAACCTTGTACTCATGATCATCTTATTAGCTCTTGTGGCATGTCTGCGTGCACGTGGAACAAATTACAGTGAATGTATTAAGTTGGTCTACATCAACGGGCTGAGTGTATTGAGTTAGTCTTCACTAGCAGGCTGCATATTGAGTTGGTCTACAATAGCCAAAATTTGGGTACAGGTTTAGTGAGGGTGTTACAAGCTCATAGAGTTCATGAAATGCTCTCCGAAATGTTGATTTAAGAAACTCATGTATTACATTTCAGTAAAGTATATCATCCACTATTTTATTCACTGAAGTTGAATTATAAAATCTATTTTATAAATTATCATTCACTAAGCTATTAGCTCATTCTTTTCTTTTATGTTTTTCCCCCACGTAGCAAGAGAGTTCCAGGTGCCTACTGTAAATGAAGCTTGCCACCCATTAGACACTTTTTATTAGTATGTCTATAAGTTTTGGGTTTGCATGTAGATCAGAGTTTGTATATATATATATGTTAGAACATAATAAGTCATGAAGTTAAAGTTGTTAATTATAAACTGTTTTCTTAGGTAAATTTTATATCAGTGAATGTTTTTGAGTTAATAAAAATTTGCATGTTAAAATCATCTAAATAAAATAAATTGGAAGTTAAAAGTGTGGGTAGCTTGGACGATAGTTACTGCTACAGGGAGTGGTATTTTTCGTTTTCACATCTCTCTCTAGATTTAATAGGTTAATCTGGAGTGGGATGTGACATTTCAGACATCCAAGGAAGGAGAATAAATACATAAAATCTATCAAATCAAAGACATAAAATGAATTGAGGCATTATCATTAAGCGAGATGGAAGTTTTAGAGAATCTAACTAATAGGCAAACAAATTCAATTATGCATACAAACGCCTGGGGGAATGAACTTGTTTATATCCAACAACATTCCAATTAGTTAGAAGAAGGCTCTTTGGCTCATTCTTTGATTTCTGGCTATCTGATGTCACATACCCAGACCACATTCCAAAGCAGCATCCTAAGTTCAATCAGCACAATAAAATAATGCCTCCAGCCACCCTAACACCCATCTCATTTACAACCATTGCATTGATTATAGTCTTCTGTGGAGATATGACCACCAAAAAAAGGCACATTCAGAGAGAAATATGGTGAAAATAAAATTCCAACTTTCTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTGGTAAATTATATGCTTCGTATGCTTGCTATAGAACTCACAACATATTAGAGAGGTTAAATTTCTTGATGTTGTCAGCTGAAGCAAATGCAAAACTGTGCCCGCGATAAAACAGTATAAAAATGTAAAGCAAATATGGAAAAAGATTTGTTTATTAGCTTTGATATCATGCTCTGGTATCAGAGCGAATTGACATCAAGAAAGCAAATCTTGGAGAATCAAGATCCAAATCTATATCGAGATAG ATGAAAGGCTTGAAAGTAAATGCCAAAAAAGAAATCCAAAAACAGACAGGATCTGTTTTGAAGGACTTGAACCAACAAAATCCATCCACGAATAACCGTCAGCGTAGACCAGGGATTCTTGGGAGATCTGTTAGATACAAGCATCAATATTCATCAATAACAACTGAAGATGATCAGAATGTAGATCCTTCTCAAGTGACATTTGAATCAGATAGCATCAGTCCATTGATTTTGGGCACAGAAACACACCCAAGTCCACATATAATTGACTCAGAAAAGAAAACTGATGAAGACGTAGCCTTTGAGGAGGAGGAGGAGGAGGAGTTCGTTGTTACCAAGGCAGAGAACAAAGTGAATAAAATTTTGGGTGAATTACTCTCTGCCAATTGTGAAGATCTAGAAGGTGATCGAGCCATCAACATATTACAGGAGCGCTTGCAGATTAAACCCATTAATTTAGAGAAATTATGTCTTCCAGATTTGGAAGCCATTCCGACAATGAATTTGAAATCTTCAAGTCGCAATCTTTCAAAGCGTAGTTTGATCAGTGTGGACAATCATTTACAAAGGACAGAAACTTTGAAATCTAAGCAGGACGATGAAACTTTGGTTAATCCTGTTTCTACACCATCCTCAATCAGAAGCCCATTGGGCTCATTATCAGCCTTAAATAGACGAATTTCACTTTCAAATTCATCAGGTGATCCATTTTCTGCTCATGGAATTGACCAATCTCCAGCAAGAGGTCCTTACCTTTTTGAACTCAGTAATCACTTGTCTGATGCAGTTGGTATTGCAGAGCAGTCAAGTGTTTCTAAATTGAAGTCACTTTTAACCAAAGACGGCGGGACTGTAGCAAATGGAATTAAGTCATCCAAAATTCTTTTTGGAGATGCTGATTCCATGTCTAAAATATCTTCAAGTAGTGTTTTAAATGTACCCCAAGTTGGTGGCGATACTGCCTTAAGTGGAACTCACGCCAGCATGGAAGCTAAAGATGATAGTGGCAGCACAGAAGTGGAAGTAAATGAGAAATTCAGTTGTCTTGAAGCCCAAGCAGATGTTGTGGCTAATATGCGGATGGAAGATCTCGAAGGATCAGCTTCCGAGCAACCAAACTCATCCATGGTGGACGTGATCAAAGAGTACCCAGTTGGCACTCAGGGTCAGTTGGGTATGATCTTCAACCCCAGTATCGGAAAACCGAGATTGGGGAAGCTTACTACCCGAATTGTTCTTGTCCTTGACTAGCGAATTGACATCAAGAAAGCAAATCTTGGAGAATCAAGATCCAAATCTATATCGAGATAG ATGAAAGGCTTGAAAGTAAATGCCAAAAAAGAAATCCAAAAACAGACAGGATCTGTTTTGAAGGACTTGAACCAACAAAATCCATCCACGAATAACCGTCAGCGTAGACCAGGGATTCTTGGGAGATCTGTTAGATACAAGCATCAATATTCATCAATAACAACTGAAGATGATCAGAATGTAGATCCTTCTCAAGTGACATTTGAATCAGATAGCATCAGTCCATTGATTTTGGGCACAGAAACACACCCAAGTCCACATATAATTGACTCAGAAAAGAAAACTGATGAAGACGTAGCCTTTGAGGAGGAGGAGGAGGAGGAGTTCGTTGTTACCAAGGCAGAGAACAAAGTGAATAAAATTTTGGGTGAATTACTCTCTGCCAATTGTGAAGATCTAGAAGGTGATCGAGCCATCAACATATTACAGGAGCGCTTGCAGATTAAACCCATTAATTTAGAGAAATTATGTCTTCCAGATTTGGAAGCCATTCCGACAATGAATTTGAAATCTTCAAGTCGCAATCTTTCAAAGCGTAGTTTGATCAGTGTGGACAATCATTTACAAAGGACAGAAACTTTGAAATCTAAGCAGGACGATGAAACTTTGGTTAATCCTGTTTCTACACCATCCTCAATCAGAAGCCCATTGGGCTCATTATCAGCCTTAAATAGACGAATTTCACTTTCAAATTCATCAGGTGATCCATTTTCTGCTCATGGAATTGACCAATCTCCAGCAAGAGGTCCTTACCTTTTTGAACTCAGTAATCACTTGTCTGATGCAGTTGGTATTGCAGAGCAGTCAAGTGTTTCTAAATTGAAGTCACTTTTAACCAAAGACGGCGGGACTGTAGCAAATGGAATTAAGTCATCCAAAATTCTTTTTGGAGATGCTGATTCCATGTCTAAAATATCTTCAAGTAGTGTTTTAAATGTACCCCAAGTTGGTGGCGATACTGCCTTAAGTGGAACTCACGCCAGCATGGAAGCTAAAGATGATAGTGGCAGCACAGAAGTGGAAGTAAATGAGAAATTCAGTTGTCTTGAAGCCCAAGCAGATGTTGTGGCTAATATGCGGATGGAAGATCTCGAAGGATCAGCTTCCGAGCAACCAAACTCATCCATGGTGGACGTGATCAAAGAGTACCCAGTTGGCACTCAGGGTCAGTTGGGTATGATCTTCAACCCCAGTATCGGAAAACCGAGATTGGGGAAGCTTACTACCCGAATTGTTCTTGTCCTTGACTAG MKGLKVNAKKEIQKQTGSVLKDLNQQNPSTNNRQRRPGILGRSVRYKHQYSSITTEDDQNVDPSQVTFESDSISPLILGTETHPSPHIIDSEKKTDEDVAFEEEEEEEFVVTKAENKVNKILGELLSANCEDLEGDRAINILQERLQIKPINLEKLCLPDLEAIPTMNLKSSSRNLSKRSLISVDNHLQRTETLKSKQDDETLVNPVSTPSSIRSPLGSLSALNRRISLSNSSGDPFSAHGIDQSPARGPYLFELSNHLSDAVGIAEQSSVSKLKSLLTKDGGTVANGIKSSKILFGDADSMSKISSSSVLNVPQVGGDTALSGTHASMEAKDDSGSTEVEVNEKFSCLEAQADVVANMRMEDLEGSASEQPNSSMVDVIKEYPVGTQGQLGMIFNPSIGKPRLGKLTTRIVLVLD
BLAST of ClCG05G013830 vs. TrEMBL
Match: A0A0A0K774_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G440590 PE=4 SV=1) HSP 1 Score: 606.7 bits (1563), Expect = 2.2e-170 Identity = 321/389 (82.52%), Postives = 343/389 (88.17%), Query Frame = 1
BLAST of ClCG05G013830 vs. TrEMBL
Match: A0A0A0K774_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G440590 PE=4 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 5.9e-03 Identity = 25/31 (80.65%), Postives = 25/31 (80.65%), Query Frame = 1
HSP 2 Score: 215.3 bits (547), Expect = 1.4e-52 Identity = 148/378 (39.15%), Postives = 216/378 (57.14%), Query Frame = 1
BLAST of ClCG05G013830 vs. TrEMBL
Match: M5XHG2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018132mg PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 1.2e-43 Identity = 145/410 (35.37%), Postives = 214/410 (52.20%), Query Frame = 1
BLAST of ClCG05G013830 vs. TrEMBL
Match: A0A0D2T459_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G078100 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 9.4e-41 Identity = 113/268 (42.16%), Postives = 159/268 (59.33%), Query Frame = 1
BLAST of ClCG05G013830 vs. TrEMBL
Match: A0A0D2T459_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G078100 PE=4 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 2.7e-03 Identity = 36/157 (22.93%), Postives = 69/157 (43.95%), Query Frame = 1
HSP 2 Score: 176.0 bits (445), Expect = 9.4e-41 Identity = 113/268 (42.16%), Postives = 159/268 (59.33%), Query Frame = 1
BLAST of ClCG05G013830 vs. TAIR10
Match: AT1G15660.1 (AT1G15660.1 centromere protein C) HSP 1 Score: 94.0 bits (232), Expect = 2.4e-19 Identity = 100/398 (25.13%), Postives = 175/398 (43.97%), Query Frame = 1
BLAST of ClCG05G013830 vs. NCBI nr
Match: gi|778729240|ref|XP_011659553.1| (PREDICTED: uncharacterized protein LOC101218908 isoform X2 [Cucumis sativus]) HSP 1 Score: 606.7 bits (1563), Expect = 3.1e-170 Identity = 321/389 (82.52%), Postives = 343/389 (88.17%), Query Frame = 1
BLAST of ClCG05G013830 vs. NCBI nr
Match: gi|778729240|ref|XP_011659553.1| (PREDICTED: uncharacterized protein LOC101218908 isoform X2 [Cucumis sativus]) HSP 1 Score: 50.4 bits (119), Expect = 8.5e-03 Identity = 25/31 (80.65%), Postives = 25/31 (80.65%), Query Frame = 1
HSP 2 Score: 606.7 bits (1563), Expect = 3.1e-170 Identity = 321/389 (82.52%), Postives = 343/389 (88.17%), Query Frame = 1
BLAST of ClCG05G013830 vs. NCBI nr
Match: gi|778729237|ref|XP_011659552.1| (PREDICTED: uncharacterized protein LOC101218908 isoform X1 [Cucumis sativus]) HSP 1 Score: 50.4 bits (119), Expect = 8.5e-03 Identity = 25/31 (80.65%), Postives = 25/31 (80.65%), Query Frame = 1
HSP 2 Score: 597.0 bits (1538), Expect = 2.4e-167 Identity = 318/389 (81.75%), Postives = 346/389 (88.95%), Query Frame = 1
BLAST of ClCG05G013830 vs. NCBI nr
Match: gi|659122255|ref|XP_008461045.1| (PREDICTED: uncharacterized protein LOC103499749 isoform X2 [Cucumis melo]) HSP 1 Score: 53.1 bits (126), Expect = 1.3e-03 Identity = 37/95 (38.95%), Postives = 45/95 (47.37%), Query Frame = 1
HSP 2 Score: 597.0 bits (1538), Expect = 2.4e-167 Identity = 318/389 (81.75%), Postives = 346/389 (88.95%), Query Frame = 1
BLAST of ClCG05G013830 vs. NCBI nr
Match: gi|659122253|ref|XP_008461044.1| (PREDICTED: uncharacterized protein LOC103499749 isoform X1 [Cucumis melo]) HSP 1 Score: 53.1 bits (126), Expect = 1.3e-03 Identity = 37/95 (38.95%), Postives = 45/95 (47.37%), Query Frame = 1
HSP 2 Score: 514.2 bits (1323), Expect = 2.1e-142 Identity = 287/389 (73.78%), Postives = 315/389 (80.98%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |