ClCG05G012220 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G012220
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	SKU5 similar 6
Location	CG_Chr05 : 15505297 .. 15505759 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGGAACTACATTTGTATGTTCACTCACTTCCTTGTTCTTGGTTTTGAGCTTCAGCTGCATCAATGGTGAAGACCCATATAGGTTTACCTGGAATATCACATATGGAGACATATGGCCTCTTGGAGTAAAGCAACAGGTATTATATTTATATCAATGTAACAGCCATTTTCTTGTTTGGCTTGAAGATGTATAATCCTCCATTGTGTTACTGATTCTTTTTTCAGGGTATTTTGATTAATGGGCAATTTCCAGGGCCACAGATTGAGGCAGTTACTAATGAGAACTTGATTATCAATGTTTTTAATAGTTTGGATGAGCCTTTCTTGATCTCCTGGTTGGTCATCTTTTTCTTTTTTTTGCTTTCTTCCATTCTTGCTCACAACTTATATGAAGAAATGCTTCCTCTGTCTCGTTTGGTTGGATTCATGATGCTTGTAATCAACCCATTATGGTGTTAA

mRNA sequence

ATGAGAGGAACTACATTTGTATGTTCACTCACTTCCTTGTTCTTGGTTTTGAGCTTCAGCTGCATCAATGGTGAAGACCCATATAGGTTTACCTGGAATATCACATATGGAGACATATGGCCTCTTGGAGTAAAGCAACAGGGTATTTTGATTAATGGGCAATTTCCAGGGCCACAGATTGAGGCAGTTACTAATGAGAACTTGATTATCAATGTTTTTAATAGTTTGGATGAGCCTTTCTTGATCTCCTGGTTGGTCATCTTTTTCTTTTTTTTGCTTTCTTCCATTCTTGCTCACAACTTATATGAAGAAATGCTTCCTCTGTCTCGTTTGGTTGGATTCATGATGCTTGTAATCAACCCATTATGGTGTTAA

Coding sequence (CDS)

ATGAGAGGAACTACATTTGTATGTTCACTCACTTCCTTGTTCTTGGTTTTGAGCTTCAGCTGCATCAATGGTGAAGACCCATATAGGTTTACCTGGAATATCACATATGGAGACATATGGCCTCTTGGAGTAAAGCAACAGGGTATTTTGATTAATGGGCAATTTCCAGGGCCACAGATTGAGGCAGTTACTAATGAGAACTTGATTATCAATGTTTTTAATAGTTTGGATGAGCCTTTCTTGATCTCCTGGTTGGTCATCTTTTTCTTTTTTTTGCTTTCTTCCATTCTTGCTCACAACTTATATGAAGAAATGCTTCCTCTGTCTCGTTTGGTTGGATTCATGATGCTTGTAATCAACCCATTATGGTGTTAA

Protein sequence

MRGTTFVCSLTSLFLVLSFSCINGEDPYRFTWNITYGDIWPLGVKQQGILINGQFPGPQIEAVTNENLIINVFNSLDEPFLISWLVIFFFFLLSSILAHNLYEEMLPLSRLVGFMMLVINPLWC

Homology

[Close]

BLAST of ClCG05G012220 vs. Swiss-Prot
Match: ASOL_TOBAC (L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.0e-20
Identity = 47/77 (61.04%), Postives = 55/77 (71.43%), Query Frame = 1


Query: 9  SLTSLFLVLSFSCINGEDPYR-FTWNITYGDIWPLGVKQQGILINGQFPGPQIEAVTNEN 68
          +  +L L LS   I  EDPY  F WN+TYG I PLGV QQGILINGQFPGP+I   +N N
Sbjct: 7  TFVALLLCLSVGVI-AEDPYLYFNWNVTYGTIAPLGVPQQGILINGQFPGPRINCTSNNN 66

Query: 69 LIINVFNSLDEPFLISW 85
          +++NVFN+LDEPFL +W
Sbjct: 67 IVVNVFNNLDEPFLFTW 82

[Close]

BLAST of ClCG05G012220 vs. Swiss-Prot
Match: ASOL_BRANA (L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.8e-18
Identity = 41/64 (64.06%), Postives = 48/64 (75.00%), Query Frame = 1


Query: 22 INGEDPY-RFTWNITYGDIWPLGVKQQGILINGQFPGPQIEAVTNENLIINVFNSLDEPF 81
          ++ EDPY    WN+TYG   PLGV QQ ILINGQFPGP I + +N N+IINVFN+LDEPF
Sbjct: 21 VHAEDPYFHHVWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNVIINVFNNLDEPF 80

Query: 82 LISW 85
          L++W
Sbjct: 81 LLTW 84

[Close]

BLAST of ClCG05G012220 vs. Swiss-Prot
Match: SKS1_ARATH (Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-12
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 1


Query: 8  CSLTSLFLVLSFSCING----EDPY-RFTWNITYGDIWPLGVKQQGILINGQFPGPQIEA 67
          CSL + FL L F+ ++      DP+  + + ++Y    PLGV QQ I +NGQFPGP + A
Sbjct: 5  CSLLASFL-LCFALLSAVSFAADPFVSYDFRVSYLTASPLGVPQQVIAVNGQFPGPLLNA 64

Query: 68 VTNENLIINVFNSLDEPFLISW 85
           TN N+++NVFN LDEP L++W
Sbjct: 65 TTNYNVVVNVFNHLDEPLLLTW 85

[Close]

BLAST of ClCG05G012220 vs. Swiss-Prot
Match: SKU5_ARATH (Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.3e-11
Identity = 39/80 (48.75%), Postives = 46/80 (57.50%), Query Frame = 1


Query: 6  FVCSLTSLFLVLSFSCINGEDPYRF-TWNITYGDIWPLGVKQQGILINGQFPGPQIEAVT 65
          F   L   F+ +SF C    DPY F  + ++Y    PLGV QQ I ING+FPGP I   T
Sbjct: 4  FKILLLVFFVNISF-CF-AADPYSFYNFEVSYITASPLGVPQQVIAINGKFPGPTINVTT 63

Query: 66 NENLIINVFNSLDEPFLISW 85
          NENL++NV N LDE  L+ W
Sbjct: 64 NENLVVNVRNKLDEGLLLHW 81

[Close]

BLAST of ClCG05G012220 vs. Swiss-Prot
Match: SKS2_ARATH (Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.4e-11
Identity = 36/80 (45.00%), Postives = 46/80 (57.50%), Query Frame = 1


Query: 6  FVCSLTSLFLVLSFSCINGEDPY-RFTWNITYGDIWPLGVKQQGILINGQFPGPQIEAVT 65
          F   + S  L+  FS     DPY  + + ++Y    PLGV QQ I +NG+FPGP I A T
Sbjct: 7  FFAFVFSFALIFGFSFAG--DPYVSYDFTLSYITASPLGVPQQVIAVNGKFPGPVINATT 66

Query: 66 NENLIINVFNSLDEPFLISW 85
          N N+ +NV N LDEP L++W
Sbjct: 67 NYNVHVNVLNHLDEPLLLTW 84

[Close]

BLAST of ClCG05G012220 vs. TrEMBL
Match: A0A0A0K1K9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G043570 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.5e-37
Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 1


Query: 1  MRGTTFVCSLTSLFLVLSFSCINGEDPYRF-TWNITYGDIWPLGVKQQGILINGQFPGPQ 60
          MR  +F+CSLT LFLVLSFSCINGEDPYRF  WNITYGDIWPLGVKQQGILINGQFPGPQ
Sbjct: 1  MRKNSFLCSLTFLFLVLSFSCINGEDPYRFLNWNITYGDIWPLGVKQQGILINGQFPGPQ 60

Query: 61 IEAVTNENLIINVFNSLDEPFLISW 85
          IEAVTNENLIINVFNSLDEPFLISW
Sbjct: 61 IEAVTNENLIINVFNSLDEPFLISW 85

[Close]

BLAST of ClCG05G012220 vs. TrEMBL
Match: A0A067JFZ0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01829 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.6e-28
Identity = 61/79 (77.22%), Postives = 72/79 (91.14%), Query Frame = 1


Query: 7  VCSLTSLFLVLSFSCINGEDPYRF-TWNITYGDIWPLGVKQQGILINGQFPGPQIEAVTN 66
          VCS   + L+L+  C++GEDPYRF +WN+TYGDI+PLGVKQQGILINGQFPGPQIE+VTN
Sbjct: 7  VCSFMVILLLLT--CVSGEDPYRFYSWNVTYGDIYPLGVKQQGILINGQFPGPQIESVTN 66

Query: 67 ENLIINVFNSLDEPFLISW 85
          ENLIIN+FNSLDEPFL+SW
Sbjct: 67 ENLIINIFNSLDEPFLLSW 83

[Close]

BLAST of ClCG05G012220 vs. TrEMBL
Match: A0A0B2S927_GLYSO (L-ascorbate oxidase like OS=Glycine soja GN=glysoja_017277 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.6e-28
Identity = 61/73 (83.56%), Postives = 68/73 (93.15%), Query Frame = 1


Query: 13 LFLVLSFSCINGEDPYRF-TWNITYGDIWPLGVKQQGILINGQFPGPQIEAVTNENLIIN 72
          LFLVL  +C+ GEDPYRF TWN+TYGDI+PLGVKQQGILIN QFPGPQIEAVTN+NLIIN
Sbjct: 11 LFLVLLVACVRGEDPYRFYTWNVTYGDIYPLGVKQQGILINWQFPGPQIEAVTNDNLIIN 70

Query: 73 VFNSLDEPFLISW 85
          V+NSLDEPFL+SW
Sbjct: 71 VYNSLDEPFLLSW 83

[Close]

BLAST of ClCG05G012220 vs. TrEMBL
Match: I1KFE9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G307100 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.6e-28
Identity = 61/73 (83.56%), Postives = 68/73 (93.15%), Query Frame = 1


Query: 13 LFLVLSFSCINGEDPYRF-TWNITYGDIWPLGVKQQGILINGQFPGPQIEAVTNENLIIN 72
          LFLVL  +C+ GEDPYRF TWN+TYGDI+PLGVKQQGILIN QFPGPQIEAVTN+NLIIN
Sbjct: 11 LFLVLLVACVRGEDPYRFYTWNVTYGDIYPLGVKQQGILINWQFPGPQIEAVTNDNLIIN 70

Query: 73 VFNSLDEPFLISW 85
          V+NSLDEPFL+SW
Sbjct: 71 VYNSLDEPFLLSW 83

[Close]

BLAST of ClCG05G012220 vs. TrEMBL
Match: I1KFF0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G307100 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.6e-28
Identity = 61/73 (83.56%), Postives = 68/73 (93.15%), Query Frame = 1


Query: 13 LFLVLSFSCINGEDPYRF-TWNITYGDIWPLGVKQQGILINGQFPGPQIEAVTNENLIIN 72
          LFLVL  +C+ GEDPYRF TWN+TYGDI+PLGVKQQGILIN QFPGPQIEAVTN+NLIIN
Sbjct: 11 LFLVLLVACVRGEDPYRFYTWNVTYGDIYPLGVKQQGILINWQFPGPQIEAVTNDNLIIN 70

Query: 73 VFNSLDEPFLISW 85
          V+NSLDEPFL+SW
Sbjct: 71 VYNSLDEPFLLSW 83

[Close]

BLAST of ClCG05G012220 vs. TAIR10
Match: AT1G41830.1 (AT1G41830.1 SKU5-similar 6)

HSP 1 Score: 115.2 bits (287), Expect = 3.0e-26
Identity = 53/73 (72.60%), Postives = 59/73 (80.82%), Query Frame = 1


Query: 13 LFLVLSFSCINGEDPYRF-TWNITYGDIWPLGVKQQGILINGQFPGPQIEAVTNENLIIN 72
          LF +  F+ +  E PYRF  WN+TYGDI+PLGV+QQGILINGQFPGP I +VTN+NLIIN
Sbjct: 13 LFCLSFFAAVTAESPYRFFDWNVTYGDIYPLGVRQQGILINGQFPGPDIHSVTNDNLIIN 72

Query: 73 VFNSLDEPFLISW 85
          V NSLDEPFLISW
Sbjct: 73 VHNSLDEPFLISW 85

[Close]

BLAST of ClCG05G012220 vs. TAIR10
Match: AT4G22010.1 (AT4G22010.1 SKU5 similar 4)

HSP 1 Score: 114.4 bits (285), Expect = 5.1e-26
Identity = 54/85 (63.53%), Postives = 68/85 (80.00%), Query Frame = 1


Query: 1  MRGTTFVCSLTSLFLVLSFSCINGEDPYRF-TWNITYGDIWPLGVKQQGILINGQFPGPQ 60
          MRG+   C ++ + L++  + + G++PYRF TW ITYGDI+PLGVKQQGILINGQFPGP 
Sbjct: 1  MRGS---CKVSIVLLLVLINGVLGDNPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPH 60

Query: 61 IEAVTNENLIINVFNSLDEPFLISW 85
          I+A+TN+N+II+VFN L EPFLISW
Sbjct: 61 IDAITNDNIIISVFNYLKEPFLISW 82

[Close]

BLAST of ClCG05G012220 vs. TAIR10
Match: AT1G76160.1 (AT1G76160.1 SKU5 similar 5)

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-25
Identity = 54/75 (72.00%), Postives = 61/75 (81.33%), Query Frame = 1


Query: 12 SLFLVLSFS-CINGEDPYRF-TWNITYGDIWPLGVKQQGILINGQFPGPQIEAVTNENLI 71
          +LF+ LS    +  EDPYRF  WNITYGDI+PLGV+QQGILING FPGP I +VTN+NLI
Sbjct: 10 ALFIGLSLLFAVTAEDPYRFFEWNITYGDIYPLGVRQQGILINGAFPGPDIHSVTNDNLI 69

Query: 72 INVFNSLDEPFLISW 85
          INV+NSLDEPFL+SW
Sbjct: 70 INVYNSLDEPFLLSW 84

[Close]

BLAST of ClCG05G012220 vs. TAIR10
Match: AT1G21850.1 (AT1G21850.1 SKU5 similar 8)

HSP 1 Score: 104.8 bits (260), Expect = 4.0e-23
Identity = 51/76 (67.11%), Postives = 59/76 (77.63%), Query Frame = 1


Query: 10 LTSLFLVLSFSCINGEDPYRF-TWNITYGDIWPLGVKQQGILINGQFPGPQIEAVTNENL 69
          +  LF ++SF  +  EDPY+F  W++TYG+I PL V QQGILING+FPGP I AVTN+NL
Sbjct: 12 ILGLFFLISF--VAAEDPYKFFEWHVTYGNISPLKVAQQGILINGKFPGPDIAAVTNDNL 71

Query: 70 IINVFNSLDEPFLISW 85
          IINVFN LDEPFLISW
Sbjct: 72 IINVFNHLDEPFLISW 85

[Close]

BLAST of ClCG05G012220 vs. TAIR10
Match: AT1G21860.1 (AT1G21860.1 SKU5 similar 7)

HSP 1 Score: 103.2 bits (256), Expect = 1.2e-22
Identity = 52/76 (68.42%), Postives = 61/76 (80.26%), Query Frame = 1


Query: 11 TSLFLV-LSFSCINGEDPYRF-TWNITYGDIWPLGVKQQGILINGQFPGPQIEAVTNENL 70
          T LFL+ L+F+    EDPYRF  W++TYG+I PLGV QQGILING+FPGP I ++TN+NL
Sbjct: 14 TLLFLISLAFA----EDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDIISITNDNL 73

Query: 71 IINVFNSLDEPFLISW 85
          IINVFN LDEPFL+SW
Sbjct: 74 IINVFNHLDEPFLLSW 85

[Close]

BLAST of ClCG05G012220 vs. NCBI nr
Match: gi|449453507|ref|XP_004144498.1| (PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus])

HSP 1 Score: 162.9 bits (411), Expect = 3.5e-37
Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 1


Query: 1  MRGTTFVCSLTSLFLVLSFSCINGEDPYRF-TWNITYGDIWPLGVKQQGILINGQFPGPQ 60
          MR  +F+CSLT LFLVLSFSCINGEDPYRF  WNITYGDIWPLGVKQQGILINGQFPGPQ
Sbjct: 1  MRKNSFLCSLTFLFLVLSFSCINGEDPYRFLNWNITYGDIWPLGVKQQGILINGQFPGPQ 60

Query: 61 IEAVTNENLIINVFNSLDEPFLISW 85
          IEAVTNENLIINVFNSLDEPFLISW
Sbjct: 61 IEAVTNENLIINVFNSLDEPFLISW 85

[Close]

BLAST of ClCG05G012220 vs. NCBI nr
Match: gi|700188282|gb|KGN43515.1| (hypothetical protein Csa_7G043570 [Cucumis sativus])

HSP 1 Score: 162.9 bits (411), Expect = 3.5e-37
Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 1


Query: 1  MRGTTFVCSLTSLFLVLSFSCINGEDPYRF-TWNITYGDIWPLGVKQQGILINGQFPGPQ 60
          MR  +F+CSLT LFLVLSFSCINGEDPYRF  WNITYGDIWPLGVKQQGILINGQFPGPQ
Sbjct: 1  MRKNSFLCSLTFLFLVLSFSCINGEDPYRFLNWNITYGDIWPLGVKQQGILINGQFPGPQ 60

Query: 61 IEAVTNENLIINVFNSLDEPFLISW 85
          IEAVTNENLIINVFNSLDEPFLISW
Sbjct: 61 IEAVTNENLIINVFNSLDEPFLISW 85

[Close]

BLAST of ClCG05G012220 vs. NCBI nr
Match: gi|659110852|ref|XP_008455444.1| (PREDICTED: L-ascorbate oxidase homolog [Cucumis melo])

HSP 1 Score: 157.5 bits (397), Expect = 1.5e-35
Identity = 77/85 (90.59%), Postives = 79/85 (92.94%), Query Frame = 1


Query: 1  MRGTTFVCSLTSLFLVLSFSCINGEDPYRF-TWNITYGDIWPLGVKQQGILINGQFPGPQ 60
          M   +F+ SLTSLFLVLSFSCI GEDPYRF TWNITYGDIWPLGVKQQGILINGQFPGPQ
Sbjct: 1  MSENSFLYSLTSLFLVLSFSCIYGEDPYRFFTWNITYGDIWPLGVKQQGILINGQFPGPQ 60

Query: 61 IEAVTNENLIINVFNSLDEPFLISW 85
          IEAVTNENLIINVFNSLDEPFLISW
Sbjct: 61 IEAVTNENLIINVFNSLDEPFLISW 85

[Close]

BLAST of ClCG05G012220 vs. NCBI nr
Match: gi|947107771|gb|KRH56154.1| (hypothetical protein GLYMA_06G307100 [Glycine max])

HSP 1 Score: 132.1 bits (331), Expect = 6.6e-28
Identity = 61/73 (83.56%), Postives = 68/73 (93.15%), Query Frame = 1


Query: 13 LFLVLSFSCINGEDPYRF-TWNITYGDIWPLGVKQQGILINGQFPGPQIEAVTNENLIIN 72
          LFLVL  +C+ GEDPYRF TWN+TYGDI+PLGVKQQGILIN QFPGPQIEAVTN+NLIIN
Sbjct: 11 LFLVLLVACVRGEDPYRFYTWNVTYGDIYPLGVKQQGILINWQFPGPQIEAVTNDNLIIN 70

Query: 73 VFNSLDEPFLISW 85
          V+NSLDEPFL+SW
Sbjct: 71 VYNSLDEPFLLSW 83

[Close]

BLAST of ClCG05G012220 vs. NCBI nr
Match: gi|802761755|ref|XP_012089872.1| (PREDICTED: L-ascorbate oxidase homolog [Jatropha curcas])

HSP 1 Score: 132.1 bits (331), Expect = 6.6e-28
Identity = 61/79 (77.22%), Postives = 72/79 (91.14%), Query Frame = 1


Query: 7  VCSLTSLFLVLSFSCINGEDPYRF-TWNITYGDIWPLGVKQQGILINGQFPGPQIEAVTN 66
          VCS   + L+L+  C++GEDPYRF +WN+TYGDI+PLGVKQQGILINGQFPGPQIE+VTN
Sbjct: 7  VCSFMVILLLLT--CVSGEDPYRFYSWNVTYGDIYPLGVKQQGILINGQFPGPQIESVTN 66

Query: 67 ENLIINVFNSLDEPFLISW 85
          ENLIIN+FNSLDEPFL+SW
Sbjct: 67 ENLIINIFNSLDEPFLLSW 83

The following BLAST results are available for this feature:

BLAST of ClCG05G012220 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ASOL_TOBAC	3.0e-20	61.04	L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1	[more]
ASOL_BRANA	4.8e-18	64.06	L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1	[more]
SKS1_ARATH	1.3e-12	46.34	Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1	[more]
SKU5_ARATH	3.3e-11	48.75	Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1	[more]
SKS2_ARATH	7.4e-11	45.00	Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1	[more]

BLAST of ClCG05G012220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1K9_CUCSA	2.5e-37	91.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G043570 PE=4 SV=1	[more]
A0A067JFZ0_JATCU	4.6e-28	77.22	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01829 PE=4 SV=1	[more]
A0A0B2S927_GLYSO	4.6e-28	83.56	L-ascorbate oxidase like OS=Glycine soja GN=glysoja_017277 PE=4 SV=1	[more]
I1KFE9_SOYBN	4.6e-28	83.56	Uncharacterized protein OS=Glycine max GN=GLYMA_06G307100 PE=4 SV=1	[more]
I1KFF0_SOYBN	4.6e-28	83.56	Uncharacterized protein OS=Glycine max GN=GLYMA_06G307100 PE=4 SV=1	[more]

BLAST of ClCG05G012220 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G41830.1	3.0e-26	72.60	SKU5-similar 6	[more]
AT4G22010.1	5.1e-26	63.53	SKU5 similar 4	[more]
AT1G76160.1	1.5e-25	72.00	SKU5 similar 5	[more]
AT1G21850.1	4.0e-23	67.11	SKU5 similar 8	[more]
AT1G21860.1	1.2e-22	68.42	SKU5 similar 7	[more]

BLAST of ClCG05G012220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453507\|ref\|XP_004144498.1\|	3.5e-37	91.76	PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus]	[more]
gi\|700188282\|gb\|KGN43515.1\|	3.5e-37	91.76	hypothetical protein Csa_7G043570 [Cucumis sativus]	[more]
gi\|659110852\|ref\|XP_008455444.1\|	1.5e-35	90.59	PREDICTED: L-ascorbate oxidase homolog [Cucumis melo]	[more]
gi\|947107771\|gb\|KRH56154.1\|	6.6e-28	83.56	hypothetical protein GLYMA_06G307100 [Glycine max]	[more]
gi\|802761755\|ref\|XP_012089872.1\|	6.6e-28	77.22	PREDICTED: L-ascorbate oxidase homolog [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008972	Cupredoxin
IPR011707	Cu-oxidase_3

Vocabulary: **Molecular Function**
Term	Definition
GO:0005507	copper ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019852	L-ascorbic acid metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008447	L-ascorbate oxidase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G012220.1	ClCG05G012220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 26..84 score: 3.
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 28..90 score: 1.12
IPR011707	Multicopper oxidase, type 3	PFAM	PF07732	Cu-oxidase_3	coord: 34..84 score: 4.1
None	No IPR available	PANTHER	PTHR11709	MULTI-COPPER OXIDASE	coord: 13..84 score: 8.8
None	No IPR available	PANTHER	PTHR11709:SF106	SUBFAMILY NOT NAMED	coord: 13..84 score: 8.8
None	No IPR available	PROFILE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..21 score:

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G012220	Watermelon (97103) v2	wcgwmbB229
ClCG05G012220	Wax gourd	wcgwgoB441
ClCG05G012220	Cucumber (Gy14) v1	cgywcgB004
ClCG05G012220	Cucumber (Gy14) v1	cgywcgB005
ClCG05G012220	Cucumber (Chinese Long) v2	cuwcgB225
ClCG05G012220	Cucurbita maxima (Rimu)	cmawcgB232
ClCG05G012220	Cucurbita maxima (Rimu)	cmawcgB234
ClCG05G012220	Cucurbita maxima (Rimu)	cmawcgB407
ClCG05G012220	Cucurbita moschata (Rifu)	cmowcgB217
ClCG05G012220	Cucurbita moschata (Rifu)	cmowcgB220
ClCG05G012220	Cucurbita moschata (Rifu)	cmowcgB406
ClCG05G012220	Wild cucumber (PI 183967)	cpiwcgB229
ClCG05G012220	Wild cucumber (PI 183967)	cpiwcgB241
ClCG05G012220	Cucumber (Chinese Long) v2	cuwcgB233
ClCG05G012220	Melon (DHL92) v3.5.1	mewcgB427
ClCG05G012220	Melon (DHL92) v3.5.1	mewcgB436
ClCG05G012220	Watermelon (97103) v1	wcgwmB287
ClCG05G012220	Cucurbita pepo (Zucchini)	cpewcgB518
ClCG05G012220	Cucurbita pepo (Zucchini)	cpewcgB557
ClCG05G012220	Cucurbita pepo (Zucchini)	cpewcgB560
ClCG05G012220	Bottle gourd (USVL1VR-Ls)	lsiwcgB332
ClCG05G012220	Bottle gourd (USVL1VR-Ls)	lsiwcgB339
ClCG05G012220	Cucumber (Gy14) v2	cgybwcgB207
ClCG05G012220	Cucumber (Gy14) v2	cgybwcgB217
ClCG05G012220	Melon (DHL92) v3.6.1	medwcgB423
ClCG05G012220	Melon (DHL92) v3.6.1	medwcgB426
ClCG05G012220	Melon (DHL92) v3.6.1	medwcgB427
ClCG05G012220	Silver-seed gourd	carwcgB0465
ClCG05G012220	Silver-seed gourd	carwcgB0464
ClCG05G012220	Silver-seed gourd	carwcgB0739
ClCG05G012220	Cucumber (Chinese Long) v3	cucwcgB229
ClCG05G012220	Cucumber (Chinese Long) v3	cucwcgB241