ClCG05G012190 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACTGCAAAGACATAGACCATGCTAGAACTTTGGGTAACAACAGTGGATGGCAAAAAGTTGGTCCATATCGACTTCTTTACTCCCCTTGGAGACATGAGGAATTTCACAGTGAACAATTAGTCCCTTCATATGGTGGTTGGATCAAAGTTTGTGGTGTACCTATTGATAAATGGAATCTTGATTCCTTTAGATTTATTGGAGATGCTTGTGGAGGCTTGTTGGAAATGGCTAGAAAAACGCTTGCAACGATAGATCTTATAGAGATTAGCCTCAAAGTTCGGAGCAATGAACTGGTTTTTTACCAGCCATGA ATGCACTGCAAAGACATAGACCATGCTAGAACTTTGGGTAACAACAGTGGATGGCAAAAAGTTGGTCCATATCGACTTCTTTACTCCCCTTGGAGACATGAGGAATTTCACAGTGAACAATTAGTCCCTTCATATGGTGGTTGGATCAAAGTTTGTGGTGTACCTATTGATAAATGGAATCTTGATTCCTTTAGATTTATTGGAGATGCTTGTGGAGGCTTGTTGGAAATGGCTAGAAAAACGCTTGCAACGATAGATCTTATAGAGATTAGCCTCAAAGTTCGGAGCAATGAACTGGTTTTTTACCAGCCATGA ATGCACTGCAAAGACATAGACCATGCTAGAACTTTGGGTAACAACAGTGGATGGCAAAAAGTTGGTCCATATCGACTTCTTTACTCCCCTTGGAGACATGAGGAATTTCACAGTGAACAATTAGTCCCTTCATATGGTGGTTGGATCAAAGTTTGTGGTGTACCTATTGATAAATGGAATCTTGATTCCTTTAGATTTATTGGAGATGCTTGTGGAGGCTTGTTGGAAATGGCTAGAAAAACGCTTGCAACGATAGATCTTATAGAGATTAGCCTCAAAGTTCGGAGCAATGAACTGGTTTTTTACCAGCCATGA MHCKDIDHARTLGNNSGWQKVGPYRLLYSPWRHEEFHSEQLVPSYGGWIKVCGVPIDKWNLDSFRFIGDACGGLLEMARKTLATIDLIEISLKVRSNELVFYQP
BLAST of ClCG05G012190 vs. TrEMBL
Match: E5GB30_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.6e-18 Identity = 44/94 (46.81%), Postives = 61/94 (64.89%), Query Frame = 1
BLAST of ClCG05G012190 vs. TrEMBL
Match: A0A0A0KFP0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367105 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 8.1e-10 Identity = 29/89 (32.58%), Postives = 51/89 (57.30%), Query Frame = 1
BLAST of ClCG05G012190 vs. NCBI nr
Match: gi|307135793|gb|ADN33672.1| (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 100.1 bits (248), Expect = 2.3e-18 Identity = 44/94 (46.81%), Postives = 61/94 (64.89%), Query Frame = 1
BLAST of ClCG05G012190 vs. NCBI nr
Match: gi|659071590|ref|XP_008460776.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis melo]) HSP 1 Score: 82.4 bits (202), Expect = 5.1e-13 Identity = 36/89 (40.45%), Postives = 55/89 (61.80%), Query Frame = 1
BLAST of ClCG05G012190 vs. NCBI nr
Match: gi|700192460|gb|KGN47664.1| (hypothetical protein Csa_6G367105 [Cucumis sativus]) HSP 1 Score: 71.2 bits (173), Expect = 1.2e-09 Identity = 29/89 (32.58%), Postives = 51/89 (57.30%), Query Frame = 1
BLAST of ClCG05G012190 vs. NCBI nr
Match: gi|658031994|ref|XP_008351490.1| (PREDICTED: uncharacterized protein LOC103414909 [Malus domestica]) HSP 1 Score: 65.5 bits (158), Expect = 6.4e-08 Identity = 36/99 (36.36%), Postives = 51/99 (51.52%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |