ClCG05G011520 (gene) Watermelon (Charleston Gray)

NameClCG05G011520
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr05 : 13774009 .. 13774471 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTATAGAAACGAATCTCAATAAATCCTCTATTAGTGTTCCTAAGATGCTTTCATGGGATAATATAACAAGGAATCCTAAATGGGTTCTTGAAAATACTTTTATTCCCCCAAAAAGGGAGAAAGAACTTTCCCATATCATAGAACATCTTGATGGGAGAGTAGAAATAAAATTCGAATACGAACCACCTAGGTTTCCTATATTTAAGTTCTAGACCTAGTACATCAAGTAGTAGGCCAGAAATCCATCTTAGCCCTATTGGGACTAACTCTTTAAGAGTTAACTTCGTAAAATTAGATCATGGTACACCCAATATTCAATATGAAGAAAAAAGACCTGCTTCTCCAACTCAAACAGATATGGAAGCAGGATCAATATTTAGAAGTCAATTAAATGTAATAATTCAATTAAATGTAATTATTACTGAATTTAAATTGGACAAGGAAGCTTTACAAAAATAG

mRNA sequence

ATGCTTATAGAAACGAATCTCAATAAATCCTCTATTAGTGTTCCTAAGATGCTTTCATGGGATAATATAACAAGGAATCCTAAATGGGTTCTTGAAAATACTTTTATTCCCCCAAAAAGGGAGAAAGAACTTTCCCATATCATAGAACATCTTGATGGGAGAGTAGAAATAAAATTCGAATACGAACCACCTAGACCTAGTACATCAAGTAGTAGGCCAGAAATCCATCTTAGCCCTATTGGGACTAACTCTTTAAGAGTTAACTTCGTAAAATTAGATCATGGTACACCCAATATTCAATATGAAGAAAAAAGACCTGCTTCTCCAACTCAAACAGATATGGAAGCAGGATCAATATTTAGAAGTCAATTAAATGTAATAATTCAATTAAATGTAATTATTACTGAATTTAAATTGGACAAGGAAGCTTTACAAAAATAG

Coding sequence (CDS)

ATGCTTATAGAAACGAATCTCAATAAATCCTCTATTAGTGTTCCTAAGATGCTTTCATGGGATAATATAACAAGGAATCCTAAATGGGTTCTTGAAAATACTTTTATTCCCCCAAAAAGGGAGAAAGAACTTTCCCATATCATAGAACATCTTGATGGGAGAGTAGAAATAAAATTCGAATACGAACCACCTAGACCTAGTACATCAAGTAGTAGGCCAGAAATCCATCTTAGCCCTATTGGGACTAACTCTTTAAGAGTTAACTTCGTAAAATTAGATCATGGTACACCCAATATTCAATATGAAGAAAAAAGACCTGCTTCTCCAACTCAAACAGATATGGAAGCAGGATCAATATTTAGAAGTCAATTAAATGTAATAATTCAATTAAATGTAATTATTACTGAATTTAAATTGGACAAGGAAGCTTTACAAAAATAG

Protein sequence

MLIETNLNKSSISVPKMLSWDNITRNPKWVLENTFIPPKREKELSHIIEHLDGRVEIKFEYEPPRPSTSSSRPEIHLSPIGTNSLRVNFVKLDHGTPNIQYEEKRPASPTQTDMEAGSIFRSQLNVIIQLNVIITEFKLDKEALQK
BLAST of ClCG05G011520 vs. TrEMBL
Match: A0A0A0M024_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G434190 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.5e-09
Identity = 52/141 (36.88%), Postives = 70/141 (49.65%), Query Frame = 1

Query: 1   MLIETNLNKSSISVPKMLSWDNITRNPKWVLENTFIPPKREKELSHIIEHLDGRVEIKF- 60
           ML+E N  KSS+++P+ L W  +T+N  W L+    P KR    + I E  DG VE++F 
Sbjct: 207 MLMEVNTEKSSMTIPRTLHWKELTKNLIWRLQEETAPIKRSSNEASITEFPDGNVEVQFT 266

Query: 61  ---------EYEPPRPSTSSSRPEIHLSPI--GTNSLRVNFVKLDHGTPNIQYE-EKRPA 120
                    E    RPST S R E+        + S+R + V      PN+ YE E    
Sbjct: 267 NDISYPRISEIMSSRPSTFSIRLEVPYKDTLRRSESIRTS-VDFTRSIPNVHYEREDGSL 326

Query: 121 SPTQTDMEAGS-IFRSQLNVI 128
           SPTQ DME  S    +Q+NVI
Sbjct: 327 SPTQFDMERRSEPAFNQINVI 346

BLAST of ClCG05G011520 vs. TrEMBL
Match: A0A022PRX9_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a020983mg PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.6e-06
Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 1

Query: 2   LIETNLNKSSISVPKMLSWDNITRNPKWVLENTFIPPKRE-KELSHIIEHLDGRVEIKF 60
           L  TNL KS++ VPK ++WD +    KWVLE    P K+E +EL  IIE+ DG VEIKF
Sbjct: 112 LFITNLAKSNLKVPKTITWDQVNLPEKWVLEKASEPVKQENRELEEIIEYPDGDVEIKF 170

BLAST of ClCG05G011520 vs. TrEMBL
Match: A0A022PR80_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a021967mg PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.7e-06
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 1

Query: 2   LIETNLNKSSISVPKMLSWDNITRNPKWVLENTFIPPKRE-KELSHIIEHLDGRVEIKF 60
           L  TNL KS++ VPK ++WD +    KWVLE    P K+E +EL  IIE+ DG VEI+F
Sbjct: 117 LFITNLAKSNLKVPKTITWDQVNLPEKWVLEKASEPVKQENRELEEIIEYPDGDVEIQF 175

BLAST of ClCG05G011520 vs. NCBI nr
Match: gi|700210425|gb|KGN65521.1| (hypothetical protein Csa_1G434190 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 3.7e-09
Identity = 52/141 (36.88%), Postives = 70/141 (49.65%), Query Frame = 1

Query: 1   MLIETNLNKSSISVPKMLSWDNITRNPKWVLENTFIPPKREKELSHIIEHLDGRVEIKF- 60
           ML+E N  KSS+++P+ L W  +T+N  W L+    P KR    + I E  DG VE++F 
Sbjct: 207 MLMEVNTEKSSMTIPRTLHWKELTKNLIWRLQEETAPIKRSSNEASITEFPDGNVEVQFT 266

Query: 61  ---------EYEPPRPSTSSSRPEIHLSPI--GTNSLRVNFVKLDHGTPNIQYE-EKRPA 120
                    E    RPST S R E+        + S+R + V      PN+ YE E    
Sbjct: 267 NDISYPRISEIMSSRPSTFSIRLEVPYKDTLRRSESIRTS-VDFTRSIPNVHYEREDGSL 326

Query: 121 SPTQTDMEAGS-IFRSQLNVI 128
           SPTQ DME  S    +Q+NVI
Sbjct: 327 SPTQFDMERRSEPAFNQINVI 346

BLAST of ClCG05G011520 vs. NCBI nr
Match: gi|604298191|gb|EYU18269.1| (hypothetical protein MIMGU_mgv1a020983mg, partial [Erythranthe guttata])

HSP 1 Score: 60.1 bits (144), Expect = 3.8e-06
Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 1

Query: 2   LIETNLNKSSISVPKMLSWDNITRNPKWVLENTFIPPKRE-KELSHIIEHLDGRVEIKF 60
           L  TNL KS++ VPK ++WD +    KWVLE    P K+E +EL  IIE+ DG VEIKF
Sbjct: 112 LFITNLAKSNLKVPKTITWDQVNLPEKWVLEKASEPVKQENRELEEIIEYPDGDVEIKF 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0M024_CUCSA2.5e-0936.88Uncharacterized protein OS=Cucumis sativus GN=Csa_1G434190 PE=4 SV=1[more]
A0A022PRX9_ERYGU2.6e-0652.54Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a020983mg... [more]
A0A022PR80_ERYGU7.7e-0650.85Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a021967mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700210425|gb|KGN65521.1|3.7e-0936.88hypothetical protein Csa_1G434190 [Cucumis sativus][more]
gi|604298191|gb|EYU18269.1|3.8e-0652.54hypothetical protein MIMGU_mgv1a020983mg, partial [Erythranthe guttata][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G011520.1ClCG05G011520.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None