ClCG05G011080 (gene) Watermelon (Charleston Gray)

NameClCG05G011080
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr05 : 12903424 .. 12905954 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACATCGCTAAAGTACAGACCTTTTCATGCAGAGAAAGCTATCGCCTTCTCAAAAGACAAGGAGCAGATCAAAGTGCTATGTAAGAACAAAGGTTAGGTGACAGATGGGAACTTCTATATCAAATTCGAACAATGGATGGCATCGATACATGTAACCCTAAAACTGATCCCAAGCTATGGAGGTTGGACAAAATTTTGTGGCATCCCTTTACACGCTTGGAATGTGAACAAATTCAAGCAAATCGAAAACGCCTGTGGAGGGTTGCTGGAAGTTTCAAAGGAAACTTGGGAAAAAACTGACATCATTGAAACCAAAATCAAAATTGGATACAACTACACCAAACTTATCCTAGCAACAATACGAATCAGCAATGACAAGAGGAATCGATTTTTAGTCCAAATGGTCGCAGTTTTAAAAGGAAGATGGCTGATAAAATGAAACTCCAAGATTCATGGTACGTTCACCAGAGAGGTAGCTATGGATTTCGATGAATTTGATCCAGAGAAGGAAAGCTACTGTTTCATTAGAAACATAGCAATTCCTCCATTCAAGATACAACAACCCAGCTCCAACTATCGCAAAACTCAGGCGAGAAACAAGAACGGCAGCGACACAGACGCCAAGAAATTTTTAAACTTTGACAGTGATGGAAGCAATGATAAGATGGATGGAATGATTTTTTTAGGGAAGAGAAAAACCCTAACAAATAAAGAAAAGGGGAAACAAAAAATTAATGCTAGTGATAGAACCTGTCGAATCGCAAAGAGAAAGGTTACTTTCCCCTCTCCTCAAAATAAAACGTATTATTATAATCAAGATTTTGCCCTTGCTCGACCGCTAAAGATTAGAAGCCCAATAGAAGCCAAAACTCAACAAAAGAAGAAGGAAACAAAGATGATATACAGAAGAATTGATCATTGATGGATCAAACGAGTAGGAGATAACTCTGATTGTAGACTTGGGCCCTCTTTCACCAATCTCGAATACATTAGTCTTAAGCCCAAACATCCATAATTTCTCTGACATAATCCCTTCTCCTACCCAATTAGACATTCTAAACGAAAGCCTTGCCGATAGGAATTTCGAAAAATAAGAAACTTTGGTCTTTGAAGAAGCCTTAAAGAAAGATCTCATTGTTTGACTCAGAAACAACAATCTTAACTAACACCAGCAAATGAACTCGAAGTCAGAGAAGCTGAAATCAATGAGAAAGAAGCTGCTAAAAGAGGGAACTTAGACAACATACATTTAGGGTACTTTGGTCCTACATGGAGATACTAACATGGAATGTAAGAGGGTTAGGCTTTCCCTCCAAAAGAGCCTTAATAAAAAATGTTATTTTCGGCTATTGTCCTAACTTCGTTCTTCTCACTAAAACTAAACTTCACAATGTTTAAAACAAATCATCCAATCAATTTGGAGCTCTATTAGTATCAATTAGTTATTCCTTAAAGCTAATGGCAGATCTGGTGGTATCATTCTTATGTGGGATGATCTTCATCATTCTGTGACTAATTACATTGAGAAAGATTTTTCAATTTCTGCAAATATCACTATGTTCGATGATTTCAGCTGGTAGATAACGACTGTTTATGGGCTTGCAAAAAGAAGAGAAATAAATTATCATGATGGAGCTATCCAACCTCAAAAACAGTTGTTCCCCCAACTAGTTATTAGGAGACTTCAATGTCGTTAGATGGGAGAGTGAAACTTTAGCTCGTAATCCAGCAAAACACAGTACGAAGAAGTTCATCTCAATCATAAACCAAATTGGTCTTATAGAGCCCCCTCTAACCAATGGGAAATTCACCTAGTTAAATCCCAAAACTCAAACTGTTTTATCGAGACTAAATCACTTTCTATGTGCTCCTAAGTAGGAAGACAAATTCACCACTCATTTCTCCAGAACTTTGCCTATAATTACTTCAAACCATTTCCCCCTTGTCCTTAAGAACTCCCATCTGAATTGAGGCCTCAGTCCTTTCTGTTTTAACAACATCAACTTGGATCTATATAGTTTCAACAAGAATATAAAGGAATGGTGGGAATCTACTAGCCAAGCTGGCTTTCCTGGATATTCTTTCAACAAAAGGCTCAAACAACTCGCCAACTGAATTAAAAATTGGCAGTCTAGACAGAGAAAGGTGACAGAAGAAGAAAAGAAATCTTGGATTCAGGAAATTGAGAAGATCGATAAGTTTGAGAGCCAACAAAGTCTCAGTGATATTGACAGTGCCTGTAGGACCTCTCTAAAAATTGATCTTTGCACCGATGCCACTAGAGAAGCTCAATATTGGTCTCAATGATACAAAAGACTTTGACTTTTCGATGGGGATGAAAACACTACTTTCTTTCACAAAGTTTGCTCGGCGAGACAACACCGAAATTTTGTTACGTAGATCCTTGATGATAATGGGAACAGTTGCATTGCAAGCACCTCCATTGATGATGTTTTCATAAATCACTTTAAGGACATCTTCATTGGAAAACAAAAAGAGCAATGGTTCATTGATGATAACTTGTAG

mRNA sequence

ATGGCAACATCGCTAAAGTACAGACCTTTTCATGCAGAGAAAGCTATCGCCTTCTCAAAAGACAAGGAGCAGATCAAAGTGCTATGTAAGAACAAAGGTTGGACAAAATTTTGTGGCATCCCTTTACACGCTTGGAATGTGAACAAATTCAAGCAAATCGAAAACGCCTGTGGAGGGTTGCTGGAAGTTTCAAAGGAAACTTGGGAAAAAACTGACATCATTGAAACCAAAATCAAAATTGGATACAACTACACCAAACTTATCCTAGCAACAATACGAATCAGCAATGACAAGAGGAATCGATTTTTAGTCCAAATGATTCATGGTACGTTCACCAGAGAGGTAGCTATGGATTTCGATGAATTTGATCCAGAGAAGGAAAGCTACTGTTTCATTAGAAACATAGCAATTCCTCCATTCAAGATACAACAACCCAGCTCCAACTATCGCAAAACTCAGGCGAGAAACAAGAACGGCAGCGACACAGACGCCAAGAAATTTTTAAACTTTGACAGTGATGGAAGCAATGATAAGATGGATGGAATGATTTTTTTAGGGAAGAGAAAAACCCTAACAAATAAAGAAAAGGGGAAACAAAAAATTAATGCTAGTGATAGAACCTGTCGAATCGCAAAGAGAAAGTCTAGACAGAGAAAGGTGACAGAAGAAGAAAAGAAATCTTGGATTCAGGAAATTGAGAAGATCGATAAGTTTGAGAGCCAACAAAGTCTCAGTGATATTGACAGTGCCTGTAGGACCTCTCTAAAAATTGATCTTTGCACCGATGCCACTAGAGAAGCTCAATATTGTTGCATTGCAAGCACCTCCATTGATGATGTTTTCATAAATCACTTTAAGGACATCTTCATTGGAAAACAAAAAGAGCAATGGTTCATTGATGATAACTTGTAG

Coding sequence (CDS)

ATGGCAACATCGCTAAAGTACAGACCTTTTCATGCAGAGAAAGCTATCGCCTTCTCAAAAGACAAGGAGCAGATCAAAGTGCTATGTAAGAACAAAGGTTGGACAAAATTTTGTGGCATCCCTTTACACGCTTGGAATGTGAACAAATTCAAGCAAATCGAAAACGCCTGTGGAGGGTTGCTGGAAGTTTCAAAGGAAACTTGGGAAAAAACTGACATCATTGAAACCAAAATCAAAATTGGATACAACTACACCAAACTTATCCTAGCAACAATACGAATCAGCAATGACAAGAGGAATCGATTTTTAGTCCAAATGATTCATGGTACGTTCACCAGAGAGGTAGCTATGGATTTCGATGAATTTGATCCAGAGAAGGAAAGCTACTGTTTCATTAGAAACATAGCAATTCCTCCATTCAAGATACAACAACCCAGCTCCAACTATCGCAAAACTCAGGCGAGAAACAAGAACGGCAGCGACACAGACGCCAAGAAATTTTTAAACTTTGACAGTGATGGAAGCAATGATAAGATGGATGGAATGATTTTTTTAGGGAAGAGAAAAACCCTAACAAATAAAGAAAAGGGGAAACAAAAAATTAATGCTAGTGATAGAACCTGTCGAATCGCAAAGAGAAAGTCTAGACAGAGAAAGGTGACAGAAGAAGAAAAGAAATCTTGGATTCAGGAAATTGAGAAGATCGATAAGTTTGAGAGCCAACAAAGTCTCAGTGATATTGACAGTGCCTGTAGGACCTCTCTAAAAATTGATCTTTGCACCGATGCCACTAGAGAAGCTCAATATTGTTGCATTGCAAGCACCTCCATTGATGATGTTTTCATAAATCACTTTAAGGACATCTTCATTGGAAAACAAAAAGAGCAATGGTTCATTGATGATAACTTGTAG

Protein sequence

MATSLKYRPFHAEKAIAFSKDKEQIKVLCKNKGWTKFCGIPLHAWNVNKFKQIENACGGLLEVSKETWEKTDIIETKIKIGYNYTKLILATIRISNDKRNRFLVQMIHGTFTREVAMDFDEFDPEKESYCFIRNIAIPPFKIQQPSSNYRKTQARNKNGSDTDAKKFLNFDSDGSNDKMDGMIFLGKRKTLTNKEKGKQKINASDRTCRIAKRKSRQRKVTEEEKKSWIQEIEKIDKFESQQSLSDIDSACRTSLKIDLCTDATREAQYCCIASTSIDDVFINHFKDIFIGKQKEQWFIDDNL
BLAST of ClCG05G011080 vs. TrEMBL
Match: E5GB30_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 7.8e-29
Identity = 90/279 (32.26%), Postives = 134/279 (48.03%), Query Frame = 1

Query: 3   TSLKYRPFHAEKAIAFSKDKEQIKVLCKNKGWT--------------------------- 62
           T++ Y+PFHA KA+   KD EQ  ++CKNKGWT                           
Sbjct: 156 TTVSYKPFHANKALICFKDFEQANLICKNKGWTTVGRFYVKFEEWNQKDHASPKFVPSYG 215

Query: 63  ---KFCGIPLHAWNVNKFKQIENACGGLLEVSKETWEKTDIIETKIKIGYNYTKLILATI 122
              K   +PLHAWN+  F QI +ACGG +EV+KET E TD+IE  I++  NY+  I A I
Sbjct: 216 GWIKVRAVPLHAWNLESFVQIGDACGGFMEVAKETRELTDLIEASIRVKDNYSGFIPAFI 275

Query: 123 RISNDKRNRFLVQM---------------IHGTFTREVAMDFDEFDPEKESYCFIRNIAI 182
           ++ + +   +++Q+               IHGTFTRE A  FDEF+   E Y F  N+AI
Sbjct: 276 KLIDKEERSYIIQVIVKTEGKWHLGRNPSIHGTFTREAARRFDEFNLNSEQYFFEGNLAI 335

Query: 183 PPFKI---------QQPSSNYRKTQARNKNGSDTDAKKFLNFDSDGSNDKMDGMIFLGKR 228
            P K           +   N    +   K G+  D   FLN+D D  + +   M  + + 
Sbjct: 336 SPEKAVSMVIGKEDWKKKGNGPLLENNKKLGAMMD---FLNYDGDSDSSEKRKMEIVDEE 395

BLAST of ClCG05G011080 vs. TrEMBL
Match: A0A0A0KFP0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367105 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 6.7e-12
Identity = 43/134 (32.09%), Postives = 66/134 (49.25%), Query Frame = 1

Query: 4   SLKYRPFHAEKAIAFSKDKEQIKVLCKNKGW----------------------------- 63
           S  Y+ FHAEKA+   ++K Q  ++CKN+GW                             
Sbjct: 11  SFTYKSFHAEKALVSFENKYQATIMCKNRGWNPVDKFYIKFEEWNTMKHGSPKLVPSYGG 70

Query: 64  -TKFCGIPLHAWNVNKFKQIENACGGLLEVSKETWEKTDIIETKIKIGYNYTKLILATIR 108
              F GI +HAW++  F QI  ACG  +E+++E  ++ +I +  +K+  N+T  I A I 
Sbjct: 71  WVNFRGILMHAWDMETFTQIGEACGSFIEITREIKKQVEIRQAMLKVKENFTGFIPAFIN 130

BLAST of ClCG05G011080 vs. TrEMBL
Match: A0A0A0KNC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G465580 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.6e-08
Identity = 34/94 (36.17%), Postives = 46/94 (48.94%), Query Frame = 1

Query: 4   SLKYRPFHAEKAIAFSKDKEQIKVLCKN------------------------------KG 63
           ++ Y+ FHAEKA+ F ++K  + +LCKN                               G
Sbjct: 200 NITYKLFHAEKAMVFLEEKNMVNLLCKNRGWTTIGKFYVKFEAWNISKHATPKVLSSYVG 259

Query: 64  WTKFCGIPLHAWNVNKFKQIENACGGLLEVSKET 68
           W KF GIPLHAWN + F QI   CGG +EV++ T
Sbjct: 260 WVKFKGIPLHAWNYSSFYQIGEVCGGFVEVARIT 293

BLAST of ClCG05G011080 vs. NCBI nr
Match: gi|307135793|gb|ADN33672.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 136.0 bits (341), Expect = 1.1e-28
Identity = 90/279 (32.26%), Postives = 134/279 (48.03%), Query Frame = 1

Query: 3   TSLKYRPFHAEKAIAFSKDKEQIKVLCKNKGWT--------------------------- 62
           T++ Y+PFHA KA+   KD EQ  ++CKNKGWT                           
Sbjct: 156 TTVSYKPFHANKALICFKDFEQANLICKNKGWTTVGRFYVKFEEWNQKDHASPKFVPSYG 215

Query: 63  ---KFCGIPLHAWNVNKFKQIENACGGLLEVSKETWEKTDIIETKIKIGYNYTKLILATI 122
              K   +PLHAWN+  F QI +ACGG +EV+KET E TD+IE  I++  NY+  I A I
Sbjct: 216 GWIKVRAVPLHAWNLESFVQIGDACGGFMEVAKETRELTDLIEASIRVKDNYSGFIPAFI 275

Query: 123 RISNDKRNRFLVQM---------------IHGTFTREVAMDFDEFDPEKESYCFIRNIAI 182
           ++ + +   +++Q+               IHGTFTRE A  FDEF+   E Y F  N+AI
Sbjct: 276 KLIDKEERSYIIQVIVKTEGKWHLGRNPSIHGTFTREAARRFDEFNLNSEQYFFEGNLAI 335

Query: 183 PPFKI---------QQPSSNYRKTQARNKNGSDTDAKKFLNFDSDGSNDKMDGMIFLGKR 228
            P K           +   N    +   K G+  D   FLN+D D  + +   M  + + 
Sbjct: 336 SPEKAVSMVIGKEDWKKKGNGPLLENNKKLGAMMD---FLNYDGDSDSSEKRKMEIVDEE 395

BLAST of ClCG05G011080 vs. NCBI nr
Match: gi|659071590|ref|XP_008460776.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis melo])

HSP 1 Score: 111.3 bits (277), Expect = 3.0e-21
Identity = 64/181 (35.36%), Postives = 89/181 (49.17%), Query Frame = 1

Query: 4   SLKYRPFHAEKAIAFSKDKEQIKVLCKN------------------------------KG 63
           S  Y  FHA+KA+          +LC+N                               G
Sbjct: 230 SFTYNAFHADKALVHFSSSIPANLLCQNKGWTTVGKYSVRFEKWCPIQHATPKLIPSYGG 289

Query: 64  WTKFCGIPLHAWNVNKFKQIENACGGLLEVSKETWEKTDIIETKIKIGYNYTKLILATIR 123
           WT F GIPLH WN+  F+QI  ACGGL++V++ET    ++IE KIKI YNY+  + A +R
Sbjct: 290 WTIFRGIPLHLWNMKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPANVR 349

Query: 124 ISNDKRNRFLVQMI---------------HGTFTREVAMDFDEFDPEKESYCFIRNIAIP 140
           I +++ N+F +Q++               HGTF R+ A  FDEF+PE E + F    AI 
Sbjct: 350 IFDNEGNKFSIQVVTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQFFFEGMEAIS 409

BLAST of ClCG05G011080 vs. NCBI nr
Match: gi|700192460|gb|KGN47664.1| (hypothetical protein Csa_6G367105 [Cucumis sativus])

HSP 1 Score: 79.7 bits (195), Expect = 9.6e-12
Identity = 43/134 (32.09%), Postives = 66/134 (49.25%), Query Frame = 1

Query: 4   SLKYRPFHAEKAIAFSKDKEQIKVLCKNKGW----------------------------- 63
           S  Y+ FHAEKA+   ++K Q  ++CKN+GW                             
Sbjct: 11  SFTYKSFHAEKALVSFENKYQATIMCKNRGWNPVDKFYIKFEEWNTMKHGSPKLVPSYGG 70

Query: 64  -TKFCGIPLHAWNVNKFKQIENACGGLLEVSKETWEKTDIIETKIKIGYNYTKLILATIR 108
              F GI +HAW++  F QI  ACG  +E+++E  ++ +I +  +K+  N+T  I A I 
Sbjct: 71  WVNFRGILMHAWDMETFTQIGEACGSFIEITREIKKQVEIRQAMLKVKENFTGFIPAFIN 130

BLAST of ClCG05G011080 vs. NCBI nr
Match: gi|700195958|gb|KGN51135.1| (hypothetical protein Csa_5G465580 [Cucumis sativus])

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-07
Identity = 34/94 (36.17%), Postives = 46/94 (48.94%), Query Frame = 1

Query: 4   SLKYRPFHAEKAIAFSKDKEQIKVLCKN------------------------------KG 63
           ++ Y+ FHAEKA+ F ++K  + +LCKN                               G
Sbjct: 200 NITYKLFHAEKAMVFLEEKNMVNLLCKNRGWTTIGKFYVKFEAWNISKHATPKVLSSYVG 259

Query: 64  WTKFCGIPLHAWNVNKFKQIENACGGLLEVSKET 68
           W KF GIPLHAWN + F QI   CGG +EV++ T
Sbjct: 260 WVKFKGIPLHAWNYSSFYQIGEVCGGFVEVARIT 293

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
E5GB30_CUCME7.8e-2932.26Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0KFP0_CUCSA6.7e-1232.09Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367105 PE=4 SV=1[more]
A0A0A0KNC5_CUCSA7.6e-0836.17Uncharacterized protein OS=Cucumis sativus GN=Csa_5G465580 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|307135793|gb|ADN33672.1|1.1e-2832.26hypothetical protein [Cucumis melo subsp. melo][more]
gi|659071590|ref|XP_008460776.1|3.0e-2135.36PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis me... [more]
gi|700192460|gb|KGN47664.1|9.6e-1232.09hypothetical protein Csa_6G367105 [Cucumis sativus][more]
gi|700195958|gb|KGN51135.1|1.1e-0736.17hypothetical protein Csa_5G465580 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G011080.1ClCG05G011080.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None